Spg005364 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg005364
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold6: 36631071 .. 36632254 (-)
RNA-Seq Expression	Spg005364
Synteny	Spg005364

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACGACATGAGAAGGACGAGACCCACGGGTTTTTCACCGGCGATCATGAACCAAGGTACTTCCAATGCTCAAACTCCTTCTTCCTCGACAATGTCGGCCACCTCGAGGGAGATTCCGAGTTCGTTTCAACCATGGAGGTCCACGCGTGCCACTCCCATTTGCCAAACCCAAAAACCCACCACTCAACAGTTCAAGAAACGCTCGTGGGAGTGGTTTTCAATGATCCAGGCGATGGGAACTCAGAGACGTGCTGCTCTTGAAGAAGAAGCAAATAGAAGAGATGAAGAAGAAGCCGCCAAAGCAGCAGGAAGCTCTCGGCAAGAGGGAACTTCAACGGGTAAAACTTCTGAACCTTCAACTAACCCCTTTTCGTCTTGCAGGAACAAACCATTTGTCACCTATAGTGCAAGGAAGAGGAGTCCCAAGAAAGTTGTGCCCGAGAAGCCACTTGTCATCGAGCCTCTCAAAATAGCAAGAATGCCCCGAACGTGTTTGAGGACATAATTCGCCAAGTTGTGGCATAGGCTCTCGTGATTGCTGAAGGGTATAAGGCTGAACAAGAAGCCTTGAGGGATATTGAGGCTGAGAGAGAGATGGAAAATCAACACATGAGGGAAGAAGATGAAGGTGCAAGAGAAAGAGATCTTAAAGAAGAGAGGAAAAAGGAAAAGGAAAGACTGGAGGCTGAAAGGGCCAAGTTAGCTGAAGAAAAAGAGAAGAAGTTAGATGAAGACCTCAGGAGGCCAGTTGCTGATTTGCAACTCCTCGAGGAAGAAAAACAAAGAAGGGAAGAATTAAAATAAGACGAAAAAAGAAGAAAGGAAGCTGAAGTCTTCCTTGCAGCTTTTGAGCCACTCCACAAGGCTCAAAATGAGGCTGAGTTGCTGCAAGAAAGAAAAGAAGGGGCCCAGCAGGGGCCAAGTGAAGGAAGTTTAGAAAAAGAAAAAGAAAGAGAAGTAGAGATTGAAGCCCAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGCAGAGGCCACTGAAGTTCAGCTTGCTGATGAGGTTTTTGAACCTCTATTCAAAGATGATCCACCAGCAGCTGATAGCACCTCTTCGGGAGAGAAGAAGGATGAAGAAGAGAAAGAAAGCAAGGAGGTCGAGACATCCAGTGACTCTGAAACAGAATCCGACTCATAG

mRNA sequence

ATGCACGACATGAGAAGGACGAGACCCACGGGTTTTTCACCGGCGATCATGAACCAAGGTACTTCCAATGCTCAAACTCCTTCTTCCTCGACAATGTCGGCCACCTCGAGGGAGATTCCGAGTTCGTTTCAACCATGGAGGTCCACGCGTGCCACTCCCATTTGCCAAACCCAAAAACCCACCACTCAACAGTTCAAGAAACGCTCGTGGGAGTGGTTTTCAATGATCCAGGCGATGGGAACTCAGAGACGTGCTGCTCTTGAAGAAGAAGCAAATAGAAGAGATGAAGAAGAAGCCGCCAAAGCAGCAGGAAGCTCTCGGCAAGAGGGAACTTCAACGGGTAAAACTTCTGAACCTTCAACTAACCCCTTTTCGTCTTGCAGGAACAAACCATTTGTCACCTATAGTGCAAGGAAGAGGAGTCCCAAGAAAGTTGTGCCCGAGAAGCCACTTGCTCTCGTGATTGCTGAAGGGTATAAGGCTGAACAAGAAGCCTTGAGGGATATTGAGGCTGAGAGAGAGATGGAAAATCAACACATGAGGGAAGAAGATGAAGGTGCAAGAGAAAGAGATCTTAAAGAAGAGAGGAAAAAGGAAAAGGAAAGACTGGAGGCTGAAAGGGCCAAGTTAGCTGAAGAAAAAGAGAAGAAGTTAGATGAAGACCTCAGGAGGCCACCACTCCACAAGGCTCAAAATGAGGCTGAGTTGCTGCAAGAAAGAAAAGAAGGGGCCCAGCAGGGGCCAAGTGAAGGAAGTTTAGAAAAAGAAAAAGAAAGAGAAGTAGAGATTGAAGCCCAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGCAGAGGCCACTGAAGTTCAGCTTGCTGATGAGGTTTTTGAACCTCTATTCAAAGATGATCCACCAGCAGCTGATAGCACCTCTTCGGGAGAGAAGAAGGATGAAGAAGAGAAAGAAAGCAAGGAGGTCGAGACATCCAGTGACTCTGAAACAGAATCCGACTCATAG

Coding sequence (CDS)

ATGCACGACATGAGAAGGACGAGACCCACGGGTTTTTCACCGGCGATCATGAACCAAGGTACTTCCAATGCTCAAACTCCTTCTTCCTCGACAATGTCGGCCACCTCGAGGGAGATTCCGAGTTCGTTTCAACCATGGAGGTCCACGCGTGCCACTCCCATTTGCCAAACCCAAAAACCCACCACTCAACAGTTCAAGAAACGCTCGTGGGAGTGGTTTTCAATGATCCAGGCGATGGGAACTCAGAGACGTGCTGCTCTTGAAGAAGAAGCAAATAGAAGAGATGAAGAAGAAGCCGCCAAAGCAGCAGGAAGCTCTCGGCAAGAGGGAACTTCAACGGGTAAAACTTCTGAACCTTCAACTAACCCCTTTTCGTCTTGCAGGAACAAACCATTTGTCACCTATAGTGCAAGGAAGAGGAGTCCCAAGAAAGTTGTGCCCGAGAAGCCACTTGCTCTCGTGATTGCTGAAGGGTATAAGGCTGAACAAGAAGCCTTGAGGGATATTGAGGCTGAGAGAGAGATGGAAAATCAACACATGAGGGAAGAAGATGAAGGTGCAAGAGAAAGAGATCTTAAAGAAGAGAGGAAAAAGGAAAAGGAAAGACTGGAGGCTGAAAGGGCCAAGTTAGCTGAAGAAAAAGAGAAGAAGTTAGATGAAGACCTCAGGAGGCCACCACTCCACAAGGCTCAAAATGAGGCTGAGTTGCTGCAAGAAAGAAAAGAAGGGGCCCAGCAGGGGCCAAGTGAAGGAAGTTTAGAAAAAGAAAAAGAAAGAGAAGTAGAGATTGAAGCCCAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGCAGAGGCCACTGAAGTTCAGCTTGCTGATGAGGTTTTTGAACCTCTATTCAAAGATGATCCACCAGCAGCTGATAGCACCTCTTCGGGAGAGAAGAAGGATGAAGAAGAGAAAGAAAGCAAGGAGGTCGAGACATCCAGTGACTCTGAAACAGAATCCGACTCATAG

Protein sequence

MHDMRRTRPTGFSPAIMNQGTSNAQTPSSSTMSATSREIPSSFQPWRSTRATPICQTQKPTTQQFKKRSWEWFSMIQAMGTQRRAALEEEANRRDEEEAAKAAGSSRQEGTSTGKTSEPSTNPFSSCRNKPFVTYSARKRSPKKVVPEKPLALVIAEGYKAEQEALRDIEAEREMENQHMREEDEGARERDLKEERKKEKERLEAERAKLAEEKEKKLDEDLRRPPLHKAQNEAELLQERKEGAQQGPSEGSLEKEKEREVEIEAQNATASGPHSEEGLAEATEVQLADEVFEPLFKDDPPAADSTSSGEKKDEEEKESKEVETSSDSETESDS

Homology

The following BLAST results are available for this feature:

BLAST of Spg005364 vs.


Match Name	E-value	Identity	Description

BLAST of Spg005364 vs.


Match Name	E-value	Identity	Description

BLAST of Spg005364 vs.


Match Name	E-value	Identity	Description

BLAST of Spg005364 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 227..247
None	No IPR available	COILS	Coil	Coil	coord: 159..179
None	No IPR available	COILS	Coil	Coil	coord: 186..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..334
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..327

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg005364.1	Spg005364.1	mRNA