Spg005198 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTACGAGTTGATGGGATTACCCCTGGTAATTAGCCAAATACCAATGCCCCTTTGAACATTTTCTCTGCGACATAGATTAGGTTTTACCATTTATCAAAAAGATGAATTTCTACCAATTGGAGTGGGGATTCTATTTGGTCGGTGTGACACTTTTGGTGGCTTATGCCTATTGTCTGTTTCAAAAGGCTTCATTTTGATTAAGAAAATAAAGTCATGAAAGAAAACAGACTATCTGAAAGCTAATCCCTTTTTACTTCCTAATATGCATTTCTCAGGTTAGAAAAATCAGTACGAATTGAACTTTCTTGGCATGGATATTCTATTGCCATGCTCCAAAGGATTAAATATTAAGAACTCATTTGTTTTGTTTTAGATTCTTATTTTCTACTGCCTTGTGCATGCCAAACAAGAAGTTGAAGTGCAAAAGCATCTTTCAAGAAACAAATTTATCTGGAGCAACAGAGAAACCTTGGTACTCGTTGCTTTGTGTTCTAATTGAATTTTTATATGAGCAAGTGCGAGACATTGCATGGAGGAGTCAGGGACATAGTTAAAACTTTTCCGTTGTGGCATGAAATTACTTTATTATTTTCATCCTCTAGTTTTTGTCAAGTATCTCGAATTTCTCCTGTCACGAATGCCATCTATTTTAAGGTTTTTGTTGTAAATTTTGGTTTTAGACACATAATTGTCTTTTATATGAAATTTTGGATAGTGCTCTACCTTAAGTTAACCATTCTCTGGGCATTAGTTTAATCTTTCTTGCACTTTTATGTTGTTTGTGGTAGAGATACTTTGTCATAACCAGATCTCCCTTACTGGGTGGCCTAAAAGCCATGAGAGAGTCTGAAGTGAATTATACTGTTGAAGCGATTCTTGCTCATCCTGAAAATGAGAGTTCGTGGAGATATCTGCGCGGACTTTATGCAGGTGACACACACTCATGGATTACTGCTCGTCAAGTTTCTTCTGTCTGCATGAAAGTTTTGAGCGGTAAAAGTCACTATGTATTTGCTTTGAGCACTCTGTTGGATCTTCTCTGCCATGGTTTCCAATCAAGCCAAGAGTTAAGAGATGCTGTTGATGCTTTGAGGATACCCGACGGTCCAACCGATTCCGACCTAGCAAAAACTGTGTGCTTAATTTTGGAACGTGTCGATCCTATGCGAGTTAACTATTGGCTCTGGCAGAAGAACAAGCTTCCTCAGTAACAGTGCCAATTCATCAGCTTCTTTCCAACATCACCAGGTACTTTTACTACCGTCCATTGTTGAGAGTTGGATTAAGGTCCATGGTTCTTCGTGACCTAAACTTGAGGATTATATTCTTCCAGTAAAGATAACCCTCTAATTCGACATGGTGAACATATATTAGCCAAAGAAAAAAAACTTGTTTTTTGCTGAATGGTGAGCTACTTTCTGTTTTGCTTGTATACAGAAAATATGTAATGTAGACCAAGTTGTGTACATCTAATGTCATTATAATTCTTTCGGGATTTGTACTAATGTATATTATGCAGCTATATGATATTTTCCACAATGTCACAAATCTAACCTTTTTCTT ATGGGTTACGAGTTGATGGGATTACCCCTGAGATACTTTGTCATAACCAGATCTCCCTTACTGGGTGGCCTAAAAGCCATGAGAGAGTCTGAAGTGAATTATACTGTTGAAGCGATTCTTGCTCATCCTGAAAATGAGAGTTCGTGGAGATATCTGCGCGGACTTTATGCAGGTGACACACACTCATGGATTACTGCTCGTCAAGTTTCTTCTGTCTGCATGAAAGTTTTGAGCGGTAAAAGTCACTATGTATTTGCTTTGAGCACTCTGTTGGATCTTCTCTGCCATGGTTTCCAATCAAGCCAAGAGTTAAGAGATGCTGTTGATGCTTTGAGGATACCCGACGGTCCAACCGATTCCGACCTAGCAAAAACTGTGTGCTTAATTTTGGAACGTGTCGATCCTATGCGAGTTAACTATTGGCTCTGGCAGAAGAACAAGCTTCCTCAGTAA ATGGGTTACGAGTTGATGGGATTACCCCTGAGATACTTTGTCATAACCAGATCTCCCTTACTGGGTGGCCTAAAAGCCATGAGAGAGTCTGAAGTGAATTATACTGTTGAAGCGATTCTTGCTCATCCTGAAAATGAGAGTTCGTGGAGATATCTGCGCGGACTTTATGCAGGTGACACACACTCATGGATTACTGCTCGTCAAGTTTCTTCTGTCTGCATGAAAGTTTTGAGCGGTAAAAGTCACTATGTATTTGCTTTGAGCACTCTGTTGGATCTTCTCTGCCATGGTTTCCAATCAAGCCAAGAGTTAAGAGATGCTGTTGATGCTTTGAGGATACCCGACGGTCCAACCGATTCCGACCTAGCAAAAACTGTGTGCTTAATTTTGGAACGTGTCGATCCTATGCGAGTTAACTATTGGCTCTGGCAGAAGAACAAGCTTCCTCAGTAA MGYELMGLPLRYFVITRSPLLGGLKAMRESEVNYTVEAILAHPENESSWRYLRGLYAGDTHSWITARQVSSVCMKVLSGKSHYVFALSTLLDLLCHGFQSSQELRDAVDALRIPDGPTDSDLAKTVCLILERVDPMRVNYWLWQKNKLPQ Homology
BLAST of Spg005198 vs. NCBI nr
Match: XP_022145198.1 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Momordica charantia]) HSP 1 Score: 265.8 bits (678), Expect = 2.3e-67 Identity = 127/140 (90.71%), Postives = 135/140 (96.43%), Query Frame = 0
BLAST of Spg005198 vs. NCBI nr
Match: XP_023527416.1 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucurbita pepo subsp. pepo]) HSP 1 Score: 255.4 bits (651), Expect = 3.1e-64 Identity = 123/141 (87.23%), Postives = 133/141 (94.33%), Query Frame = 0
BLAST of Spg005198 vs. NCBI nr
Match: XP_022955792.1 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucurbita moschata]) HSP 1 Score: 255.4 bits (651), Expect = 3.1e-64 Identity = 123/141 (87.23%), Postives = 133/141 (94.33%), Query Frame = 0
BLAST of Spg005198 vs. NCBI nr
Match: KAG6582046.1 (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 255.4 bits (651), Expect = 3.1e-64 Identity = 123/141 (87.23%), Postives = 133/141 (94.33%), Query Frame = 0
BLAST of Spg005198 vs. NCBI nr
Match: XP_022979874.1 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucurbita maxima]) HSP 1 Score: 253.1 bits (645), Expect = 1.5e-63 Identity = 122/141 (86.52%), Postives = 132/141 (93.62%), Query Frame = 0
BLAST of Spg005198 vs. ExPASy Swiss-Prot
Match: O24304 (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Pisum sativum OX=3888 GN=FTA PE=1 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 2.6e-45 Identity = 87/141 (61.70%), Postives = 116/141 (82.27%), Query Frame = 0
BLAST of Spg005198 vs. ExPASy Swiss-Prot
Match: P93227 (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Solanum lycopersicum OX=4081 GN=FTA PE=1 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 1.2e-39 Identity = 82/136 (60.29%), Postives = 95/136 (69.85%), Query Frame = 0
BLAST of Spg005198 vs. ExPASy Swiss-Prot
Match: Q9LX33 (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Arabidopsis thaliana OX=3702 GN=FTA PE=1 SV=2) HSP 1 Score: 161.8 bits (408), Expect = 6.1e-39 Identity = 81/139 (58.27%), Postives = 104/139 (74.82%), Query Frame = 0
BLAST of Spg005198 vs. ExPASy TrEMBL
Match: A0A6J1CVB2 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Momordica charantia OX=3673 GN=LOC111014704 PE=3 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67 Identity = 127/140 (90.71%), Postives = 135/140 (96.43%), Query Frame = 0
BLAST of Spg005198 vs. ExPASy TrEMBL
Match: A0A6J1GUK6 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111457674 PE=3 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 1.5e-64 Identity = 123/141 (87.23%), Postives = 133/141 (94.33%), Query Frame = 0
BLAST of Spg005198 vs. ExPASy TrEMBL
Match: A0A6J1IXT4 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC111479431 PE=3 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 7.5e-64 Identity = 122/141 (86.52%), Postives = 132/141 (93.62%), Query Frame = 0
BLAST of Spg005198 vs. ExPASy TrEMBL
Match: A0A5A7TSR3 (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003410 PE=3 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 3.5e-61 Identity = 119/141 (84.40%), Postives = 129/141 (91.49%), Query Frame = 0
BLAST of Spg005198 vs. ExPASy TrEMBL
Match: A0A1S3BYS8 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Cucumis melo OX=3656 GN=LOC103494543 PE=3 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 3.5e-61 Identity = 119/141 (84.40%), Postives = 129/141 (91.49%), Query Frame = 0
BLAST of Spg005198 vs. TAIR 10
Match: AT3G59380.1 (farnesyltransferase A ) HSP 1 Score: 161.8 bits (408), Expect = 4.4e-40 Identity = 81/139 (58.27%), Postives = 104/139 (74.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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