Spg005174 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg005174
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	transcription factor bHLH128-like
Location	scaffold11: 35499382 .. 35503941 (-)
RNA-Seq Expression	Spg005174
Synteny	Spg005174

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAATCTCTCTCTCTCTCTCTTTCGTTCGCTTCGAATTTCATTTCTTCAGAAACCAAAACTCACAGATCCCATTCCGAATCCGCCATATGTACCAATCCACTTCCTCCTCTTCTTCCTCTCAGAAATCCATGGTTCCCGGTCACGGCGGCGCAGGTGTCGGCGGCGGCGGCGGCGGTGGTGGTGGTGGTCTCACTCGGTACGGCTCAGCGCCTGGCTCTCTGCTAACCTCGGCGGTGGATTCCGTGATCGCGAGTCGGCATCCGGAGGCCGCCGCCGCCTCGCTCCGTACGCCGCCGTCGTTCGGCGGCCACTACTTCTCCTCTGCAGACTCCTCCGTTGTGGAGTCGTCTCGGAAGGTCGTTCAGTCGTCGTCGACGTCCAACGATCTGAAGTCGTCGTCGTCGGCCGCGGCGGCCGCCTTGCAACGGACGTACGGAATCCACGATTTGGCACTGGGGGATTTCTCGACGGCCAGAAATTTTAGTAATAATGGTGGTCAATCGTCTTCGTCTTCGCCGTTGGTTCGCCAGAGAAGCTCGCCGGCCGGATTTCTCGGCCATCTCTCCGTCGCTGAAGGAACCGGTACTCTCTCTCTCTCTCTCTCTCTAATTTTGCTTTCGCCTCCGCCGGCGCGTGGCTTCACCACGTTCTTTCTAAAAGGCTGATGGCCGTTGACTACATACCCAAATTTACGAAAATGTCCCGCCCAATTTTCAAAATTACCAAATTACCCTTCTCGGTGTATACATCGAAATTATCGGAACTTTTTTTTTTTGACAATATGTGTGGAAGGAAGATTCGAACCACAAACCTTGTGATTATCAATACAACTAACTAAACTCTTGTTGGCAAATTATCCGAACTTCTAGTTCTAAATGAGTCAAACTTTTTATTTTATGTAAATTTTAGTTTTAATTTTTTTTATATATTTAAATGGAGTGATTTATTATCAATTTTTTTTAGAGTTTAGATCAAATTTTAATTTAACTTATAGTTATGGCATAATTAATTTTTTTTTATGTATTTAAAATTAAAAAGTATAGTATTTTCTTCGAATCCAGGTCATAAGTCACGTGCAAGATGCTGTCAGCATTGCAATTGCATGATGATGTCGATTTCGATTTTCCTTTTTTTTTAAAAAAAAAAAATAATGTTATTTATTTTTTTTTTTAATTTTTTTATTTTCCGATCTTCAGTTGGCTGAAAGCCGACATGTAGTTTCGGTGGCCAATGTAGTTAAAGAAGAGCCGTTGTTTTCGAGCATCTTTTAATAATGGTGGAAAAAATGGAATCCACTATTATTCTTAATAGGGAAATTATCCACTACGGATGATTCTAGGAATAAATCGGTACAATGAATCCTTCCACGTCAAGAAAACTGGTCGGGTCGGATCGAATTGAATTGATTTTTGATTCGAAAAAGTCACATTAATGGGTTCTGTTTCATCCGTTTCAATTTGGATGTGTTTTGGTATGTTTGGTTGTCGGTTTGTCGTTTCCCTTTTGAAATATTGATTCAACCATTCATAAAGTAGCTTACGACATTGTTTTGTTTTTATTCGTTCGAATCAATAAGTTTGTTTTGTGTTGAATTTGACAAAAAAAATTAAAGTGAATAGACCCATTACATGTTGATTTTATTTCATAATTGTCATCTCGCTTTAAATACCAATTATATAAAATTAGATATTATTGTCTCTTCTTTTTGTATTAAGAATTTAGGGTTAGAGTTGTATGGATGAAAATACGAATTTTTCTCTAATTTTCTGGCCTTATATTTAATTTGATATTTTCAGAAAATAAAATAAATAAGTTTCCTGTTATTCTAGTACTATAAATATTATGGTCCACATTTTGTCGAAGTAGATATTTATACACAGACATACTTGCTCGACAGGATTAGATTCCGGTGGGCCCTTGTATAATTAAAAAAGTTAAAAATTAGATAATTCTATAATGACAGCATTTAATAATGTTAAAGTTTTTCTTTATTTGTTATTTAAATAATATTCCCAAATCAATCATATGATTCTTCTATTTTTAACAAAAACATTTAACTAATTATACAAAGTTATTTTTATTCTTAGTTCGAAATAAATATCATTACTACTTTTTTTGAAATAGTGATTTGAATCCTCAAGTTTATTAATATTTTGACTATTGAATTATGTTTGTGAAAATTAATATCAATATCAATTAGATAAAATAATGTAATTTTAAACTTGCTTACCCAAACAAATGTTGTAGTTTGTTTGTTTATTTGCATTTTCTTTAGATAAAAAAAAAAATAATAATCAAAGTTTACTTAAACTTGGTCAAAATGTATCGATTTTTCATCATAAACTTCAATTTCATTCATTTAAACCTTAGAATTTAGATGTGTTTTGGAAATTTTACTTTATGTTTTGAAGAAATAAAAAAAAAAAAAGCTCTAATGTAGTTTTTCTTCTAAATCTATCCATCTTGTATTATGTTTTATATATATATATATATAAAATTACTATGTTCTATAATTTTTTTTCTCTTTTTTGAGTTCAACCATGGTCTTCTATAATTTTTCAGTAAATACATATAAGACTATACATTTGTTAAACGAAAACCTAATAGAAAGTTGAAGAAATGAAAACCTTCATTAGGATAAAAAATGAATCTTTGTTTTAAAGTAAAAATTACGATACTTATTCCAGCATAAAGCGTCAACACACAATGAAATAAAAAATTTAGAATAAAAACTAAGGTCTCGTAAAATAACCATTTGGTTTTTGTGTTTTTGTTTTTGATTTTTGGTTTTTGAAAATTATGTTTGTTTACTCTTAATTTCCTTACAATGATTTTTATTTTTGTTAAGGACACATTTAAGTTCCTAGTCAAATTTTAAAAACAAAAACAAGTTTTCTGAAAACTACTTTGTTTAGTTTTCAAAATTTGACTTGGTTTTTGAAAACAAAGGAAAGATGTAGATAACAAAACAAAGAAACTTGTGAGTAAAAATAGTGTTTGTTGGCTTAATTTTCAAAAACTAAAAATAAAAAACAAAATGATTATCAAACGGGGCCTACTTTTTTTAGTTTTCAAAATTTGTCTTGGTTTTTGAAAACAAGGGAAGGATATAGATAACAAAAAAAAAAAAAAAACTATTTTTAGAAAACATATGAGAGTAAGAAAATTCAAACCACATACATAAGTTGTATGCTAGTTGAACTATGCTCACGTTGGCACAAAACAATAAAAGTAGTGTTTATAGGCTTACTTTTCAAAAACCGAATGGTTATCAAACGGGATCTAATATATTTAATTTCTCTCTCTCCCTGGGCCGGGGTACGTACATAGTAAGTATATCTAACATTACGAAACGTGTGACAAAAAAAAAAAAAAAAAAACAGGAGGATTTTCATTGACGAGAGGAGGGAGCTACAGCTCACAAAACGGGAATGGAGGAAGGCTGAAGTCGCAGCTGAGCTTCAGTGGGCAAGAGTCGTTGTCTGGAATGAGCGAGAGCGTGGTGGAAGGCACTGTGAACTCCTCCACCAACGCCAACACCACTCATTCTCATTCCTTTGGCTTCGCCATGGACGACTCTTGGGACACCTCCAATAATAATAACTCCATTTTCTTTGCTGCCCCTTCTCATTCTTCCAAGCGATCCAAGCACCATTCTGATGCTGACTTCTTCAATTGCCTCACCGGCCTCGAGTCCCAGGTAACCTTCTTATTCTCACCCGCTCTACCCTAACGTCCTTATAATTAGATAACATGGGCTTTCATTTCAAAACCAATTGGCAATGAGAGGACGGAGGAGTAACCCACACATCTTATAAATTGTGAGGTCTCTATTTGTTATTATTATTTTTTTTCAATGTGGGATCCTCAACCGTCCTACCTAGACTTAGGGTAAGTTTGGTTTAACTTTTCAAGTGTCTAATTTAAAAAAAAATATATTCATTTTGAACAAAAATTCTAATGTTTGGCTACCACTAAAAATGAGATTAAGAAACAAACCATTTTGAGAGAAACATTTGAAAGAAAATTTTTTAAAAAGAGTTTTTAAGGATATGATAACTTGTGTATAAAAACTTTACAAAATGTTTTTCGAAAAATGCATTTTTGAAAAACATTTAAATTAGAAAGGTTTTCGAACGGATGTGAGTGTGTGTATCGATGTGAGTGTGTGTATCGATTCACTTTCTGAGACTGATTTTTTGGGGAATTACTTTAGAATCGTTTTATCACTTCTTTTTTTTTCCCTCAGTAAAATATATTTTTTCTTTATTATTGTTTTGATCATATAGTTCTTTATTAGCAAGAATTTGTCTCATAATTAACAAAATGTTGAGTGATTATGAACTTAAAAAGACATATGTTGGTGGTTGGCTTATTTGCATTGTATTTCAGTTTAGCCTGCCGCAGACCAGTTTGGAAATGGCAACTGTGGAGAGGCTGCTGCAAATCCCCGAAGACTCTGTTCCTTGTAAGATCCGAGCCAAGCGCGGCTGCGCGACTCATCCTCGGAGCATCGCCGAAAGGGTTAGTCCAACTTTTACGTGCATTGCACATGTGA

mRNA sequence

ATGTACCAATCCACTTCCTCCTCTTCTTCCTCTCAGAAATCCATGGTTCCCGGTCACGGCGGCGCAGGTGTCGGCGGCGGCGGCGGCGGTGGTGGTGGTGGTCTCACTCGGTACGGCTCAGCGCCTGGCTCTCTGCTAACCTCGGCGGTGGATTCCGTGATCGCGAGTCGGCATCCGGAGGCCGCCGCCGCCTCGCTCCGTACGCCGCCGTCGTTCGGCGGCCACTACTTCTCCTCTGCAGACTCCTCCGTTGTGGAGTCGTCTCGGAAGGTCGTTCAGTCGTCGTCGACGTCCAACGATCTGAAGTCGTCGTCGTCGGCCGCGGCGGCCGCCTTGCAACGGACGTACGGAATCCACGATTTGGCACTGGGGGATTTCTCGACGGCCAGAAATTTTAGTAATAATGGTGGTCAATCGTCTTCGTCTTCGCCGTTGGTTCGCCAGAGAAGCTCGCCGGCCGGATTTCTCGGCCATCTCTCCGTCGCTGAAGGAACCGGAGGATTTTCATTGACGAGAGGAGGGAGCTACAGCTCACAAAACGGGAATGGAGGAAGGCTGAAGTCGCAGCTGAGCTTCAGTGGGCAAGAGTCGTTGTCTGGAATGAGCGAGAGCGTGGTGGAAGGCACTGTGAACTCCTCCACCAACGCCAACACCACTCATTCTCATTCCTTTGGCTTCGCCATGGACGACTCTTGGGACACCTCCAATAATAATAACTCCATTTTCTTTGCTGCCCCTTCTCATTCTTCCAAGCGATCCAAGCACCATTCTGATGCTGACTTCTTCAATTGCCTCACCGGCCTCGAGTCCCAGGTAACCTTCTTATTCTCACCCGCTCTACCCTAA

Coding sequence (CDS)

ATGTACCAATCCACTTCCTCCTCTTCTTCCTCTCAGAAATCCATGGTTCCCGGTCACGGCGGCGCAGGTGTCGGCGGCGGCGGCGGCGGTGGTGGTGGTGGTCTCACTCGGTACGGCTCAGCGCCTGGCTCTCTGCTAACCTCGGCGGTGGATTCCGTGATCGCGAGTCGGCATCCGGAGGCCGCCGCCGCCTCGCTCCGTACGCCGCCGTCGTTCGGCGGCCACTACTTCTCCTCTGCAGACTCCTCCGTTGTGGAGTCGTCTCGGAAGGTCGTTCAGTCGTCGTCGACGTCCAACGATCTGAAGTCGTCGTCGTCGGCCGCGGCGGCCGCCTTGCAACGGACGTACGGAATCCACGATTTGGCACTGGGGGATTTCTCGACGGCCAGAAATTTTAGTAATAATGGTGGTCAATCGTCTTCGTCTTCGCCGTTGGTTCGCCAGAGAAGCTCGCCGGCCGGATTTCTCGGCCATCTCTCCGTCGCTGAAGGAACCGGAGGATTTTCATTGACGAGAGGAGGGAGCTACAGCTCACAAAACGGGAATGGAGGAAGGCTGAAGTCGCAGCTGAGCTTCAGTGGGCAAGAGTCGTTGTCTGGAATGAGCGAGAGCGTGGTGGAAGGCACTGTGAACTCCTCCACCAACGCCAACACCACTCATTCTCATTCCTTTGGCTTCGCCATGGACGACTCTTGGGACACCTCCAATAATAATAACTCCATTTTCTTTGCTGCCCCTTCTCATTCTTCCAAGCGATCCAAGCACCATTCTGATGCTGACTTCTTCAATTGCCTCACCGGCCTCGAGTCCCAGGTAACCTTCTTATTCTCACCCGCTCTACCCTAA

Protein sequence

MYQSTSSSSSSQKSMVPGHGGAGVGGGGGGGGGGLTRYGSAPGSLLTSAVDSVIASRHPEAAAASLRTPPSFGGHYFSSADSSVVESSRKVVQSSSTSNDLKSSSSAAAAALQRTYGIHDLALGDFSTARNFSNNGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTGGFSLTRGGSYSSQNGNGGRLKSQLSFSGQESLSGMSESVVEGTVNSSTNANTTHSHSFGFAMDDSWDTSNNNNSIFFAAPSHSSKRSKHHSDADFFNCLTGLESQVTFLFSPALP

Homology

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BLAST of Spg005174 vs. NCBI nr
Match: XP_038899818.1 (transcription factor bHLH128-like isoform X1 [Benincasa hispida])

HSP 1 Score: 320.1 bits (819), Expect = 1.9e-83
Identity = 212/291 (72.85%), Postives = 231/291 (79.38%), Query Frame = 0


Query: 1   MYQSTSSSSSSQKSMVPGHGGAGVGGGGGGGGGGLTRYGSAPGSLLTSAVDSVIASRHPE 60
           MYQSTSSSSSSQKSM   H GAG+GGGG GGGGGLTRYGSAPGSLLT+AVDSVI SR P+
Sbjct: 1   MYQSTSSSSSSQKSMPSAHAGAGLGGGGSGGGGGLTRYGSAPGSLLTTAVDSVIGSRQPD 60

Query: 61  AAAASLRTPPSFGGHYFSSADSSVVESSRKVVQSSSTSNDLKSSSS-----AAAAALQRT 120
            +AA+LR PPSFGGHYFSS DSSVVESSRKVVQSSSTSNDLKSSSS     AAAAAL R+
Sbjct: 61  -SAATLRGPPSFGGHYFSSVDSSVVESSRKVVQSSSTSNDLKSSSSTTAAAAAAAALNRS 120

Query: 121 YGIHDLALGDFSTARNFSNNGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTGGFSLTRGGS 180
           YG +DLALGDFST RNF++NGGQSSSSSPLVRQRSSPAGFLGHLSVAE  GGFSLT GG 
Sbjct: 121 YGFNDLALGDFSTGRNFNSNGGQSSSSSPLVRQRSSPAGFLGHLSVAEPNGGFSLTMGG- 180

Query: 181 YSSQNGNG-GRLKSQLSFSGQES----LSGMSESVVEGTVNSSTN---ANTTHSHSFG-- 240
                GNG GRLKSQ+SF+GQ++    +S MSES VE   NS +N   +NT  +HSFG  
Sbjct: 181 ----GGNGIGRLKSQMSFNGQDNSLSQISEMSESFVE-AANSCSNGLQSNTNSTHSFGPS 240

Query: 241 -FAMDDSWDTSNNNNSIFFAAPSHSSKRSKHHSDADFFNCLTGLESQVTFL 276
            FAMD SW+TS  NNSI F AP   +KRSKHHSDADFF   T LESQV  L
Sbjct: 241 AFAMDSSWETS--NNSIVFGAP--HAKRSKHHSDADFF---TSLESQVRIL 277

[Close]

BLAST of Spg005174 vs. NCBI nr
Match: XP_038899826.1 (transcription factor bHLH128-like isoform X2 [Benincasa hispida])

HSP 1 Score: 317.4 bits (812), Expect = 1.2e-82
Identity = 210/287 (73.17%), Postives = 229/287 (79.79%), Query Frame = 0


Query: 1   MYQSTSSSSSSQKSMVPGHGGAGVGGGGGGGGGGLTRYGSAPGSLLTSAVDSVIASRHPE 60
           MYQSTSSSSSSQKSM   H GAG+GGGG GGGGGLTRYGSAPGSLLT+AVDSVI SR P+
Sbjct: 1   MYQSTSSSSSSQKSMPSAHAGAGLGGGGSGGGGGLTRYGSAPGSLLTTAVDSVIGSRQPD 60

Query: 61  AAAASLRTPPSFGGHYFSSADSSVVESSRKVVQSSSTSNDLKSSSS-----AAAAALQRT 120
            +AA+LR PPSFGGHYFSS DSSVVESSRKVVQSSSTSNDLKSSSS     AAAAAL R+
Sbjct: 61  -SAATLRGPPSFGGHYFSSVDSSVVESSRKVVQSSSTSNDLKSSSSTTAAAAAAAALNRS 120

Query: 121 YGIHDLALGDFSTARNFSNNGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTGGFSLTRGGS 180
           YG +DLALGDFST RNF++NGGQSSSSSPLVRQRSSPAGFLGHLSVAE  GGFSLT GG 
Sbjct: 121 YGFNDLALGDFSTGRNFNSNGGQSSSSSPLVRQRSSPAGFLGHLSVAEPNGGFSLTMGG- 180

Query: 181 YSSQNGNG-GRLKSQLSFSGQES----LSGMSESVVEGTVNSSTN---ANTTHSHSFG-- 240
                GNG GRLKSQ+SF+GQ++    +S MSES VE   NS +N   +NT  +HSFG  
Sbjct: 181 ----GGNGIGRLKSQMSFNGQDNSLSQISEMSESFVE-AANSCSNGLQSNTNSTHSFGPS 240

Query: 241 -FAMDDSWDTSNNNNSIFFAAPSHSSKRSKHHSDADFFNCLTGLESQ 272
            FAMD SW+TS  NNSI F AP   +KRSKHHSDADFF   T LESQ
Sbjct: 241 AFAMDSSWETS--NNSIVFGAP--HAKRSKHHSDADFF---TSLESQ 273

[Close]

BLAST of Spg005174 vs. NCBI nr
Match: XP_004152076.1 (transcription factor bHLH128 isoform X2 [Cucumis sativus])

HSP 1 Score: 293.9 bits (751), Expect = 1.5e-75
Identity = 198/281 (70.46%), Postives = 218/281 (77.58%), Query Frame = 0


Query: 1   MYQSTSSSSSSQKSMVPGHGGAGVGGGGGGGGGGLTRYGSAPGSLLTSAVDSVIASRHPE 60
           MYQSTSSSSSSQKSM   HGGA          GGLTRYGSAPGS LT+AVDSVI +R P+
Sbjct: 1   MYQSTSSSSSSQKSMSSAHGGA------PASAGGLTRYGSAPGSFLTTAVDSVIGTRQPD 60

Query: 61  AAAASLRTPPSFGGHYFSSADSSVVESSRKVVQSSSTSNDLKSSSSAAAAALQRTYGIHD 120
            +AA+LR PPSFG HYFSSADSSVVESSRKVVQSSSTSNDLK SSSA AAAL R+YG +D
Sbjct: 61  -SAATLRAPPSFGAHYFSSADSSVVESSRKVVQSSSTSNDLK-SSSATAAALNRSYGFND 120

Query: 121 LALGDFSTARNFSNNGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTGGFSLTRGGSYSSQN 180
           LALGDFST RNF++NGGQSSSSSPLVRQRSSPAGFLGHLSVAE  GGFSLT GG     N
Sbjct: 121 LALGDFSTGRNFNSNGGQSSSSSPLVRQRSSPAGFLGHLSVAEPNGGFSLTMGGG-GGGN 180

Query: 181 GNGGRLKSQLSFSGQES----LSGMSESVVEGTVNSS----TNANTTHSH--SFGFAMDD 240
           G GGRLKSQ+SF+GQ++    +S +SES VE   + S    +N N+THS   S  FAMD 
Sbjct: 181 G-GGRLKSQMSFNGQDNSLSQISEISESFVEAANSCSNGLQSNTNSTHSFAPSSAFAMDS 240

Query: 241 SWDTSNNNNSIFFAAPSHSSKRSKHHSDADFFNCLTGLESQ 272
           SWDTS  +NSI FAAP   +KRSKHHSDADFF   TGLESQ
Sbjct: 241 SWDTS--SNSIVFAAP--HAKRSKHHSDADFF---TGLESQ 264

[Close]

BLAST of Spg005174 vs. NCBI nr
Match: KAG7029066.1 (Transcription factor bHLH [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 291.6 bits (745), Expect = 7.3e-75
Identity = 199/278 (71.58%), Postives = 214/278 (76.98%), Query Frame = 0


Query: 1   MYQSTSSSSSSQKSMVPGHGGAGVGGGGGGGGGGLTRYGSAPGSLLTSAVDSVIASRHPE 60
           MYQSTSSSSSS  SM   H G   GGGGG GGGGLTRYGSAPGSLL SAVDSVI  RHP+
Sbjct: 1   MYQSTSSSSSSHNSMPSSHAG---GGGGGAGGGGLTRYGSAPGSLLNSAVDSVIGKRHPD 60

Query: 61  AAAASLRTPPSFGGHYFSSADSSVVESSRKVVQSSSTSNDLKSSSSAAAAALQRTYGIHD 120
            + A LRTPPSFGGH+FSSA+SSVVESSRKVVQSSSTS+DLK SS+AAAAALQR+YGIHD
Sbjct: 61  -SDAFLRTPPSFGGHFFSSAESSVVESSRKVVQSSSTSDDLK-SSAAAAAALQRSYGIHD 120

Query: 121 LALGDFSTARNFSNNGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTGGFSLTRGGSYSSQN 180
           LAL DFSTAR+F++NGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTGGFSLTRGG      
Sbjct: 121 LALEDFSTARDFNSNGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTGGFSLTRGG-----G 180

Query: 181 GNGGRLKSQLSFSGQE----SLSGMSESVVEGTVNSSTNANTTHSHSF---GFAMDDSWD 240
           G  GRLKSQLSFSG +     +S MSESVVEG          + SHSF    FAM DSWD
Sbjct: 181 GGIGRLKSQLSFSGGQDSVSQMSSMSESVVEG----------SSSHSFAPTAFAM-DSWD 240

Query: 241 TSNNNNSIFFAAPSHSSKRSKHHSDADFFNCLTGLESQ 272
           TS   NSI FAAP H  +    HSD DFF   TGL+SQ
Sbjct: 241 TS---NSIAFAAP-HPKRSKLLHSDGDFF---TGLDSQ 250

[Close]

BLAST of Spg005174 vs. NCBI nr
Match: XP_031739984.1 (transcription factor bHLH128 isoform X1 [Cucumis sativus])

HSP 1 Score: 290.0 bits (741), Expect = 2.1e-74
Identity = 198/282 (70.21%), Postives = 218/282 (77.30%), Query Frame = 0


Query: 1   MYQSTSSSSSSQKSMVPGHGGAGVGGGGGGGGGGLTRYGSAPGSLLTSAVDSVIASRHPE 60
           MYQSTSSSSSSQKSM   HGGA          GGLTRYGSAPGS LT+AVDSVI +R P+
Sbjct: 1   MYQSTSSSSSSQKSMSSAHGGA------PASAGGLTRYGSAPGSFLTTAVDSVIGTRQPD 60

Query: 61  AAAASLRTPPSFGGHYFSSADSSVVESSRKVVQSSSTSNDLKSSSSAAAAALQRTYGIHD 120
            +AA+LR PPSFG HYFSSADSSVVESSRKVVQSSSTSNDLK SSSA AAAL R+YG +D
Sbjct: 61  -SAATLRAPPSFGAHYFSSADSSVVESSRKVVQSSSTSNDLK-SSSATAAALNRSYGFND 120

Query: 121 LALGDFSTARNFSNNGGQSSSSSPLVRQRSSPAGFLGHLSVAE-GTGGFSLTRGGSYSSQ 180
           LALGDFST RNF++NGGQSSSSSPLVRQRSSPAGFLGHLSVAE   GGFSLT GG     
Sbjct: 121 LALGDFSTGRNFNSNGGQSSSSSPLVRQRSSPAGFLGHLSVAEPNAGGFSLTMGGG-GGG 180

Query: 181 NGNGGRLKSQLSFSGQES----LSGMSESVVEGTVNSS----TNANTTHSH--SFGFAMD 240
           NG GGRLKSQ+SF+GQ++    +S +SES VE   + S    +N N+THS   S  FAMD
Sbjct: 181 NG-GGRLKSQMSFNGQDNSLSQISEISESFVEAANSCSNGLQSNTNSTHSFAPSSAFAMD 240

Query: 241 DSWDTSNNNNSIFFAAPSHSSKRSKHHSDADFFNCLTGLESQ 272
            SWDTS  +NSI FAAP   +KRSKHHSDADFF   TGLESQ
Sbjct: 241 SSWDTS--SNSIVFAAP--HAKRSKHHSDADFF---TGLESQ 265

[Close]

BLAST of Spg005174 vs. ExPASy Swiss-Prot
Match: Q8H102 (Transcription factor bHLH128 OS=Arabidopsis thaliana OX=3702 GN=BHLH128 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.2e-14
Identity = 103/268 (38.43%), Postives = 136/268 (50.75%), Query Frame = 0


Query: 1   MYQSTSS-SSSSQKSMVPGHGGAGVGGGGGGGGGGLTRYGSAPGSLLTSAVDSVIASRHP 60
           MYQS+SS SSSSQ+S +P             GGGGL RYGSAPGS L S VD VI     
Sbjct: 1   MYQSSSSTSSSSQRSSLP-------------GGGGLIRYGSAPGSFLNSVVDEVIGGGSS 60

Query: 61  EAAAASLRTPPS--FGGHYFS-SADSSVVESSRKVVQSSSTSNDLK------SSSSAAAA 120
            A   +   P S  F G++F+ +ADSS + S       +++S+  K      +++S    
Sbjct: 61  NARDFTGYQPSSDNFIGNFFTGAADSSSLRSDSTTCGVNNSSDGQKQLGNNNNNNSNKDI 120

Query: 121 ALQRTYGIHDLALGDFSTARNFSN-NGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTGGFS 180
            L R+YG       + S     ++  GG SS S  L RQRSSPA F  +L  A     FS
Sbjct: 121 FLDRSYG----GFNEISQQHKSNDIGGGNSSGSYSLARQRSSPADFFTYL--ASDKNNFS 180

Query: 181 LTRGGS-YSSQNG-NGG----RLKSQLSFSGQESLSGMSESVVEGTVNSSTNANTTHSHS 240
           L +  S YS Q G NGG    RLKSQLSF+  +SL+ ++E  V  T     + ++  + S
Sbjct: 181 LNQPTSDYSPQGGSNGGRGHSRLKSQLSFTNHDSLARINE--VNETPVHDGSGHSFSAAS 240

Query: 241 FGFAMDDSWDTSNNNNSIFFAAPSHSSK 252
           FG A  DSWD  + +       PS  SK
Sbjct: 241 FGAATTDSWDDGSGSIGFTVTRPSKRSK 247

[Close]

BLAST of Spg005174 vs. ExPASy TrEMBL
Match: A0A0A0KZ44 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G017190 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 7.2e-76
Identity = 198/281 (70.46%), Postives = 218/281 (77.58%), Query Frame = 0


Query: 1   MYQSTSSSSSSQKSMVPGHGGAGVGGGGGGGGGGLTRYGSAPGSLLTSAVDSVIASRHPE 60
           MYQSTSSSSSSQKSM   HGGA          GGLTRYGSAPGS LT+AVDSVI +R P+
Sbjct: 1   MYQSTSSSSSSQKSMSSAHGGA------PASAGGLTRYGSAPGSFLTTAVDSVIGTRQPD 60

Query: 61  AAAASLRTPPSFGGHYFSSADSSVVESSRKVVQSSSTSNDLKSSSSAAAAALQRTYGIHD 120
            +AA+LR PPSFG HYFSSADSSVVESSRKVVQSSSTSNDLK SSSA AAAL R+YG +D
Sbjct: 61  -SAATLRAPPSFGAHYFSSADSSVVESSRKVVQSSSTSNDLK-SSSATAAALNRSYGFND 120

Query: 121 LALGDFSTARNFSNNGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTGGFSLTRGGSYSSQN 180
           LALGDFST RNF++NGGQSSSSSPLVRQRSSPAGFLGHLSVAE  GGFSLT GG     N
Sbjct: 121 LALGDFSTGRNFNSNGGQSSSSSPLVRQRSSPAGFLGHLSVAEPNGGFSLTMGGG-GGGN 180

Query: 181 GNGGRLKSQLSFSGQES----LSGMSESVVEGTVNSS----TNANTTHSH--SFGFAMDD 240
           G GGRLKSQ+SF+GQ++    +S +SES VE   + S    +N N+THS   S  FAMD 
Sbjct: 181 G-GGRLKSQMSFNGQDNSLSQISEISESFVEAANSCSNGLQSNTNSTHSFAPSSAFAMDS 240

Query: 241 SWDTSNNNNSIFFAAPSHSSKRSKHHSDADFFNCLTGLESQ 272
           SWDTS  +NSI FAAP   +KRSKHHSDADFF   TGLESQ
Sbjct: 241 SWDTS--SNSIVFAAP--HAKRSKHHSDADFF---TGLESQ 264

[Close]

BLAST of Spg005174 vs. ExPASy TrEMBL
Match: A0A6J1IAU9 (transcription factor bHLH128 OS=Cucurbita maxima OX=3661 GN=LOC111470812 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 8.7e-74
Identity = 196/278 (70.50%), Postives = 208/278 (74.82%), Query Frame = 0


Query: 1   MYQSTSSSSSSQKSMVPGHGGAGVGGGGGGGGGGLTRYGSAPGSLLTSAVDSVIASRHPE 60
           MYQSTSSSSSS  SM   H GA   GGG  GGGGLTRYGSAPGSLL SAVDSVI  RHP+
Sbjct: 1   MYQSTSSSSSSHNSMPSSHAGA---GGGASGGGGLTRYGSAPGSLLNSAVDSVIGKRHPD 60

Query: 61  AAAASLRTPPSFGGHYFSSADSSVVESSRKVVQSSSTSNDLKSSSSAAAAALQRTYGIHD 120
            + A LRTPPSFGGH FSSA+SSVVESSRKVVQSSSTSNDLKSS   AAAALQR YG+HD
Sbjct: 61  -SDAFLRTPPSFGGHSFSSAESSVVESSRKVVQSSSTSNDLKSS---AAAALQRPYGLHD 120

Query: 121 LALGDFSTARNFSNNGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTGGFSLTRGGSYSSQN 180
           LAL DFSTAR+F+ NGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTGGFSLTRGG      
Sbjct: 121 LALEDFSTARDFNGNGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTGGFSLTRGG-----G 180

Query: 181 GNGGRLKSQLSFSGQE----SLSGMSESVVEGTVNSSTNANTTHSHSF---GFAMDDSWD 240
           G  GRLKSQLSFSG +     +S MSESVVEG          + S+SF    FAM DSWD
Sbjct: 181 GGIGRLKSQLSFSGGQDSVSQMSSMSESVVEG----------SSSYSFAPTAFAM-DSWD 240

Query: 241 TSNNNNSIFFAAPSHSSKRSKHHSDADFFNCLTGLESQ 272
           TS   NSI FAAP H  +    HSD DFF   TGL+SQ
Sbjct: 241 TS---NSIAFAAPHHPKRSKLLHSDGDFF---TGLDSQ 249

[Close]

BLAST of Spg005174 vs. ExPASy TrEMBL
Match: A0A6J1EWR4 (transcription factor bHLH128-like OS=Cucurbita moschata OX=3662 GN=LOC111439094 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 8.7e-74
Identity = 193/278 (69.42%), Postives = 209/278 (75.18%), Query Frame = 0


Query: 1   MYQSTSSSSSSQKSMVPGHGGAGVGGGGGGGGGGLTRYGSAPGSLLTSAVDSVIASRHPE 60
           MYQSTSSSSSS  SM   H           GGGGLTRYGSAPGSLL SAVDSVI  RHP+
Sbjct: 1   MYQSTSSSSSSHNSMPSSH----------AGGGGLTRYGSAPGSLLNSAVDSVIGKRHPD 60

Query: 61  AAAASLRTPPSFGGHYFSSADSSVVESSRKVVQSSSTSNDLKSSSSAAAAALQRTYGIHD 120
            + A LRTPPSFGGH+FSSA+SSVVESSRKVVQSSSTS+DLKSS++AAAAALQR+YGIHD
Sbjct: 61  -SDAFLRTPPSFGGHFFSSAESSVVESSRKVVQSSSTSDDLKSSAAAAAAALQRSYGIHD 120

Query: 121 LALGDFSTARNFSNNGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTGGFSLTRGGSYSSQN 180
           LAL DFSTAR+F++NGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTGGFSLTRGG      
Sbjct: 121 LALEDFSTARDFNSNGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTGGFSLTRGG-----G 180

Query: 181 GNGGRLKSQLSFSGQE----SLSGMSESVVEGTVNSSTNANTTHSHSF---GFAMDDSWD 240
           G  GRLKSQLSFSG +     +S MSESVVEG          + SHSF    FAM DSWD
Sbjct: 181 GGIGRLKSQLSFSGGQDSVSQMSSMSESVVEG----------SSSHSFAPTAFAM-DSWD 240

Query: 241 TSNNNNSIFFAAPSHSSKRSKHHSDADFFNCLTGLESQ 272
           TS   NSI FAAP H  +    HSD DFF   TGL+SQ
Sbjct: 241 TS---NSIAFAAP-HPKRSKLLHSDGDFF---TGLDSQ 244

[Close]

BLAST of Spg005174 vs. ExPASy TrEMBL
Match: A0A6J1CBF5 (transcription factor bHLH128 OS=Momordica charantia OX=3673 GN=LOC111009166 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 7.7e-70
Identity = 187/275 (68.00%), Postives = 204/275 (74.18%), Query Frame = 0


Query: 1   MYQSTSSSSSSQKSMVPGHGGAGVGGGGGGGGGGLTRYGSAPGSLLTSAVDSVI-ASRHP 60
           MYQSTSSSSSSQKSM         G  GGGGGGGLTRYGSAPGSLLTSAVDSVI   RHP
Sbjct: 1   MYQSTSSSSSSQKSM---------GPAGGGGGGGLTRYGSAPGSLLTSAVDSVIGGGRHP 60

Query: 61  EAAAASLRTPPSFGGHYFSSADSSVVESSRKVVQSSSTSNDLKSSSS--AAAAALQRTYG 120
           ++ A+    PPSFGGHYFSSAD             SSTSNDLKSSSS  AAAAAL R+YG
Sbjct: 61  DSTASLRTPPPSFGGHYFSSAD-------------SSTSNDLKSSSSGAAAAAALNRSYG 120

Query: 121 IHDLALGDFSTARNFSNNGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTG-GFSLTR-GGS 180
           IHDLALGDFS  RNF++NGGQSSSSSPLVRQRSSPAGFLGH +VA+G G GFS+TR GG+
Sbjct: 121 IHDLALGDFSIPRNFNSNGGQSSSSSPLVRQRSSPAGFLGHFAVADGNGSGFSVTRGGGN 180

Query: 181 YSSQNGNGG--RLKSQLSFSGQESL---SGMSESVVEGTVNSSTNANTTHSHSFGFAMDD 240
           Y SQN N G  RLKSQLSFSGQ+SL   S MSESVVEG  +S+ NAN   +HSFG    D
Sbjct: 181 YGSQNNNNGVCRLKSQLSFSGQDSLSQISEMSESVVEGVNSSNANANIAITHSFGI---D 240

Query: 241 SWDTSNNNNSIFFAAPSHSSKRSKHHSDADFFNCL 266
           SWD S N+NSI F AP     +  HHSD+DFFNCL
Sbjct: 241 SWD-SANSNSIVFTAP---HPKRPHHSDSDFFNCL 246

[Close]

BLAST of Spg005174 vs. ExPASy TrEMBL
Match: A0A1S4DZV8 (LOW QUALITY PROTEIN: transcription factor bHLH128 OS=Cucumis melo OX=3656 GN=LOC103494873 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 3.8e-69
Identity = 187/286 (65.38%), Postives = 210/286 (73.43%), Query Frame = 0


Query: 1   MYQSTSSSSSSQKSMVPGHGGAGVGGGGGGGGGGLTRYGSAPGSLLTSAVDSVIASRHPE 60
           MYQSTSSSSSSQKSM   H  A         GGGLTRYGSAPGS LT+AVDSVI SR P+
Sbjct: 1   MYQSTSSSSSSQKSMSSAHAAA--------SGGGLTRYGSAPGSFLTTAVDSVIGSRQPD 60

Query: 61  AAAASLRTPPSFGGHYFSSADSSVVESSRKVVQSSSTSNDLKSSSSAAAAALQRTYGIHD 120
            +AA+LR PPSFG HYFSSADSSVVESSRKVVQSSSTSNDLKSSS+    AL R+YG +D
Sbjct: 61  -SAATLRGPPSFGNHYFSSADSSVVESSRKVVQSSSTSNDLKSSST---TALNRSYGFND 120

Query: 121 LALGDFSTARNF--SNNGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTGGFSLTRGGSYS- 180
           LALG F    NF  ++NGGQSSSSSPLVRQRSSPAGFLGHLSVAE  GGFSLT GG  S 
Sbjct: 121 LALGGFLDGXNFNSNSNGGQSSSSSPLVRQRSSPAGFLGHLSVAEPNGGFSLTMGGGGSG 180

Query: 181 --SQNGNGGRLKSQLSFSGQES----LSGMSESVVEGTVNSS----TNANTTHSH--SFG 240
             S  G GGRLK+Q+SF+GQ++    +S +SES VE   + S    +N N+THS   S  
Sbjct: 181 SGSGGGGGGRLKNQMSFNGQDNSLSQISEISESFVEAANSCSNGLQSNTNSTHSFAPSSA 240

Query: 241 FAMDDSWDTSNNNNSIFFAAPSHSSKRSKHHSDADFFNCLTGLESQ 272
           FAMD SWDTS  +NSI FAAP H+ +   HHSDADFF   +GLESQ
Sbjct: 241 FAMDSSWDTS--SNSIVFAAP-HAKRSKHHHSDADFF---SGLESQ 268

[Close]

BLAST of Spg005174 vs. TAIR 10
Match: AT1G05805.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 8.2e-16
Identity = 103/268 (38.43%), Postives = 136/268 (50.75%), Query Frame = 0


Query: 1   MYQSTSS-SSSSQKSMVPGHGGAGVGGGGGGGGGGLTRYGSAPGSLLTSAVDSVIASRHP 60
           MYQS+SS SSSSQ+S +P             GGGGL RYGSAPGS L S VD VI     
Sbjct: 1   MYQSSSSTSSSSQRSSLP-------------GGGGLIRYGSAPGSFLNSVVDEVIGGGSS 60

Query: 61  EAAAASLRTPPS--FGGHYFS-SADSSVVESSRKVVQSSSTSNDLK------SSSSAAAA 120
            A   +   P S  F G++F+ +ADSS + S       +++S+  K      +++S    
Sbjct: 61  NARDFTGYQPSSDNFIGNFFTGAADSSSLRSDSTTCGVNNSSDGQKQLGNNNNNNSNKDI 120

Query: 121 ALQRTYGIHDLALGDFSTARNFSN-NGGQSSSSSPLVRQRSSPAGFLGHLSVAEGTGGFS 180
            L R+YG       + S     ++  GG SS S  L RQRSSPA F  +L  A     FS
Sbjct: 121 FLDRSYG----GFNEISQQHKSNDIGGGNSSGSYSLARQRSSPADFFTYL--ASDKNNFS 180

Query: 181 LTRGGS-YSSQNG-NGG----RLKSQLSFSGQESLSGMSESVVEGTVNSSTNANTTHSHS 240
           L +  S YS Q G NGG    RLKSQLSF+  +SL+ ++E  V  T     + ++  + S
Sbjct: 181 LNQPTSDYSPQGGSNGGRGHSRLKSQLSFTNHDSLARINE--VNETPVHDGSGHSFSAAS 240

Query: 241 FGFAMDDSWDTSNNNNSIFFAAPSHSSK 252
           FG A  DSWD  + +       PS  SK
Sbjct: 241 FGAATTDSWDDGSGSIGFTVTRPSKRSK 247

The following BLAST results are available for this feature:

BLAST of Spg005174 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899818.1	1.9e-83	72.85	transcription factor bHLH128-like isoform X1 [Benincasa hispida]	[more]
XP_038899826.1	1.2e-82	73.17	transcription factor bHLH128-like isoform X2 [Benincasa hispida]	[more]
XP_004152076.1	1.5e-75	70.46	transcription factor bHLH128 isoform X2 [Cucumis sativus]	[more]
KAG7029066.1	7.3e-75	71.58	Transcription factor bHLH [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_031739984.1	2.1e-74	70.21	transcription factor bHLH128 isoform X1 [Cucumis sativus]	[more]

BLAST of Spg005174 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H102	1.2e-14	38.43	Transcription factor bHLH128 OS=Arabidopsis thaliana OX=3702 GN=BHLH128 PE=1 SV=...	[more]

BLAST of Spg005174 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ44	7.2e-76	70.46	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G017190 PE=4 S...	[more]
A0A6J1IAU9	8.7e-74	70.50	transcription factor bHLH128 OS=Cucurbita maxima OX=3661 GN=LOC111470812 PE=4 SV...	[more]
A0A6J1EWR4	8.7e-74	69.42	transcription factor bHLH128-like OS=Cucurbita moschata OX=3662 GN=LOC111439094 ...	[more]
A0A6J1CBF5	7.7e-70	68.00	transcription factor bHLH128 OS=Momordica charantia OX=3673 GN=LOC111009166 PE=4...	[more]
A0A1S4DZV8	3.8e-69	65.38	LOW QUALITY PROTEIN: transcription factor bHLH128 OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of Spg005174 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05805.1	8.2e-16	38.43	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 34..272
None	No IPR available	PANTHER	PTHR16223:SF177	TRANSCRIPTION FACTOR BHLH129	coord: 34..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg005174.1	Spg005174.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding