Spg005047 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg005047
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CS domain-containing protein
Location	scaffold11: 12327801 .. 12332450 (+)
RNA-Seq Expression	Spg005047
Synteny	Spg005047

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTATAACCCAAAATTACTTTAATCCAATCTTCCTCCGACCAAAAATGTGTTTAAACGTTTACGCACGAAGCCCCAGAGTGAACTTCAATTTTAAATTCAGGTTCCTTTTCCTCCCAGTCTAGCCGAGAAGGGTTTCTCTCGATTCTCTTCAACATCCCTTCCAAGGATCAATCGCCTCCTTTTCTCTTCTGTTCGTCCTCAGAATGAGGTAATGTCTGTTAATTTTACTGTTTCTTCACATGTTCCTGTAGTTTTATTTGATCATCTAACTTTCAGTGTGCCACTTTTAGCTATTTCTGAATTTGATTATTCGCCCTTCTTGCCGCAAAATCACGCCATTTTTTATTCCTCTTCAACTTCGTTGCGCTTTTGAATGTGAAATTTTCTATTTCTTGAACCTGGATTCTTGTTTTTGGATGAATTGGTTTGGTTTTTTTTCCTTTTTTTTGTTTGTTTGTGGACCGGTGCTTGTGAAAGATGTTGTCTGTAATCTGTTTCAATGAATGCGAGGCTGGTAAATCTGGGTTAGAATGGATTAGAGTTGGGGTTTTGATCGCCTTGATAGAAGAAGGCAGTAGTCAAGTCATCACCCTAGTTTTTCTCGTGTATGCAGTAGTCGTAACCCGGAGGTTCTATGGGCTCAGCGTTCGGATAAGGTTTATCTGACCATTGCTTTACCTGATGCTAAAGATATTTCTGTGAAGTGTGAACCTCATGGGTTATTTAGCTTCTCGGCGAAGGGCTTGCAAGGCGCATCTTTTGACTTCACTTTGGAACTCTTTGGGTCCATAGTGCCTGAGGTGAGCTATTGACTAACCTTTGATGCACTTCTTTCTTCTGTTTAGATCATGTTTAGACTGATCTCGATGTGTCCATTATTGATCTTGCATCATATCATGTGGTTTCTTATTCTCTTATGTGAGGAGGTTGACGACTATTCTAGTGGAAGTTGGTAGTCAACACTTTTAAGTGTTTAGAAAACTGGCATCATGTTATGATGATTGTTTTTGGAAGTTCCATTTCTTATTAGCTTAGTTTGCTAAAAAGTTTAGGATCTTTGCTTAATATTTATGCACCAGTTCTCTCTTTGCTTGATACAGGGCTGTAAAACTAAGGTTGGTTTGAGGAACATTATTTGCTCCGTCCAAAAAGAACAGAAAGGTTGGTGGAAAAGACTTTTGAAAACAGAAGAAAAACCTGCTCCGTACTTGAAGGTTGATTGGAATAAATGGTGTGATGAGGATGAGTCAGACTGTAAGTTCTTACATATATCACATATGTTTGTTGGTATGTGAAATGCGAACACCCTAGGAATGTAGATGGAATATACAAAAAGGAGAACTCCCCAATCCTAAACGAAGTTACATAAAAGCTTGTGAAATGAGAAAAGAAGCATTTACACCAGCTTAGAGTATGAATGAAAATCATTTCAAGAAACCAATAAAAGGAAGAAGTTTGTTTCTGAATGTCTCGTTGTTCCTTTCTGACATTATGTATCGTAAGAACACTCTAATAAGTTGAACCCATAAATTATCCTTTATTTTTTCTGAAAGGATGGCCCAGCAACATAGAAGATATGAAAGTATTGATAATAAGTTTCTACTTTTGCCATTCAACAATTTGAGTTTTTCATCCTACACATTTCAAAGATTTTGAATCTTCCTGATGTTTTCTCGGTCCTTGTTTGTCGCTGCTTTAAAGTTCAACTACTTGAAATTTTCTAACTTTCTGTAGCAGATATCCAATGTTAAAAAACAATTATACGGACCTTGATATAATTTTATAATATTGGTTTATGATGCAAGTGTTCAAGTATTAGTAGGAAAATAGTGGGAATGTTATTAGGAATATTAGCAATGGCATATTTATAATTACTTGAGAATTTGATTTGTGGATAGAGGAATTTGGGGTTTGGGTAGGCAGAATTTTGAAGATTAGTTTTTGTGAGAGAGAGATAGCCCTCCTGAAAAGCTATACTAGTATATCATTTCTTTTATATTACAATACCATTTCAGTCTTATTTTCTTACTCCCAACCTTAAGACACAGATCTGTGCCAGATTTGGCTCTGCTTTTGTTTACTTAAATATGAAACCGTCATCCCATGCTATTCCTTCACCGTTTGGCTATGCTATTTGTTAATTGTAACTCAGCGCTTGTAGATTCAAAATTCTTAGAAGTAGAACTTTAATCTTGCATTGCCTATTTGTAATACCTGAGTTCTAACAGTATAATTGATTTTGCAGCCACTTTGGCTTCTGATGACGACCTTGCAGTAAGTTGATTCTATGTATTTCCTATTTGCTTTAATTTTGTTGAAAGTTCAAGTCGTCTTACACAAGCTACGTAAATAATTTTCTACAGTATATGGGCCAAGATGATGGAAGCGGTGAGGATGGAGGAATGCTATGTGAGTCCAATTTAATCTATTCCATTTAAATATGATAAGAGTAATGATGTTATTTCTTATGAATCATAGAACTGGCGTGGTATAAGTTCTTGCAGGTTTCTTTTTTCTTTTTTGTCTTCTTGAGTCCTTATTCAGCATGTGAATGATTATTAAATCATTTGGTAAAACATGAATTACTTAAATCCCTAGCTGATTTAAGTCAGTTACACTTCCTTTTCCACGTGGAAAAAACATATTAATCATTTCAAGTCATTTTTTTAACCGAGAATCCTTCTTATTGATGATATGAAAAGATACAACCAAAAATCTATAACATTCCAATGGGAATTACATCAATCCCTCAATTGGAATTGATAATTACGGAAAAAAAAAACTAAACAAACCCCAAATAGATATTTTGATTGCATTAACCTGTAATTTGAAATATTTTGTTTTTAGTTTACTATTTTTACTTTTTTTTTCTTTTTGAGTTCATCAATATTTGGAGGTGGGAGGATTCGAACCTATGACCTCTTGATCGAGGGTATATGTCAACTACCGCCGAGTTATGCTCACGTTGGCCTATTTTTACAAGCTATACTCAATTTCTCTGGTTTTTTTTTCCTTTTTCTTTTTTTCGTATTTCTCAAAAAAACACTTTCAACGAGTTTTGAAAACTTCTTTTTTAGGCCCCGTTTGATAACCATTTGGTTCTTGGATTTTGAAAATTATGCTTTTTTCTTCCAATTTTCTTACAATGGTTTTCATATTTGTTAAGGACACATCTAAATTCCTTGCCAAATTCCAAAAACAAAAACAAGTTTCTGAAAACTACTTGTTATAGTTTTCAAAACTTGACTTGGTTTTTGAAAACATGGGAAGGTAGATTACAAAACAAAGAAACTTATAGGAGGAAGTAGTGTTTGTTAGCTTCATTTTCAAAAATAATAGACCAAATGGTTATCAAACAAGGTCATAGTTTTGAAAATTTGGCTTGATTATCGAAACATTTTTAAAAATTAGATGATGGAAGAAAGGTATTGTGGGTAAATAAGTCTAGCTTTTTAAACGCAGAATGGTTACCAAATGAGTACTAATATTCTGCTTCTTATTGACTCCTTGACAGATCTCCCTGACTTGGAAAAGGCCAGAGGAAACTAGCAAAGGCGGCTGTAAATAGCCAACTATCCGAAGGTGAAGTTTGTATAGAAATATGAATATCCTAGAACCATTAGATCGACTAGCAAGTGTTGATACTGTTTTTATTTCGTGGCTGAGGACTGGTGCTCATAAAATTGTCTTGTCTTCTAAACTTTGCATTTTTTAGCTGCTCTTATACGTTTGTCTATGCCCTCTCGTGAGCTGATCGGTTCAAATTTTGTAGTCATTGTTCATCCATTTGTGTTCGTTGTTAACGATCAGTAGCGTAGTAGTTTGTCGTGCCGAATTAGCTAACGTAATTTCTTCTTTCGTTTTGTCATATATGCATGGGCCTTACCTTACATTTGATACTTCACATTATAGCCTTAATATCTCCTGTTTTAAGTTATCATGTATGAGATTCTTTTAAGAACTTGTTTTGATTTTTTTTTTTTTTGAGTTGTTGGAGGATTTGAACTCATGACCTCTTGATCGTAAACACATTTTATGTTGGTTGAGCTATGCTCTTGTTGGCTTGTTTTGATAATTTGGTTTAGGGATGCAGGAGATGGTTTGGAAAAATGAAGGGAGAGAGATAGCCCATGAAAATGAGAGACTATGTAAATCATATGCGGTATCTTTGTTTTAAAAATTAAATTCTTGTATTAATAATTAAGTTTGAAAAAAAACAGTAGAAAAAGAACAGCCGACTCCATACTAAACGACTCTGTACCCCAAACATTGATCAAGTAACTTTATAGATTTCATAACTCCCTCAAAACTAAACAACTTTGCATCCTAAATATCGATTAAATAACTCTACACATTTCATAACTACCCTAAACTAAACAATTCCAGGTATAATAACTCCAATCCTTGCTTCAAACACCCTCTTAAGGTCCTAGCAAGTGTATTTGTTACTTGTTTTTTTTTTTTTTCTTTTGTAGGGATATAATTAATCACAATATTTCCATTTTGCACATGTTATCTAAGAAAGTGATGTTCTCAACGTCTAGGAACTTGTTTAAAATTCAAACCAAAATCATGTCAAGTCTGTTACATCCATAAAACTTGAGAGAAATGGTGGGTGCAATTTTCTTAGGACTGTATATATGAATCCC

mRNA sequence

ATGAGTAGTCGTAACCCGGAGGTTCTATGGGCTCAGCGTTCGGATAAGGTTTATCTGACCATTGCTTTACCTGATGCTAAAGATATTTCTGTGAAGTGTGAACCTCATGGGTTATTTAGCTTCTCGGCGAAGGGCTTGCAAGGCGCATCTTTTGACTTCACTTTGGAACTCTTTGGGTCCATAGTGCCTGAGGGCTGTAAAACTAAGGTTGGTTTGAGGAACATTATTTGCTCCGTCCAAAAAGAACAGAAAGGTTGGTGGAAAAGACTTTTGAAAACAGAAGAAAAACCTGCTCCGTACTTGAAGGTTGATTGGAATAAATGGTGTGATGAGGATGAGTCAGACTCCACTTTGGCTTCTGATGACGACCTTGCATATATGGGCCAAGATGATGGAAGCGGTGAGGATGGAGGAATGCTATATCTCCCTGACTTGGAAAAGGCCAGAGGAAACTAG

Coding sequence (CDS)

ATGAGTAGTCGTAACCCGGAGGTTCTATGGGCTCAGCGTTCGGATAAGGTTTATCTGACCATTGCTTTACCTGATGCTAAAGATATTTCTGTGAAGTGTGAACCTCATGGGTTATTTAGCTTCTCGGCGAAGGGCTTGCAAGGCGCATCTTTTGACTTCACTTTGGAACTCTTTGGGTCCATAGTGCCTGAGGGCTGTAAAACTAAGGTTGGTTTGAGGAACATTATTTGCTCCGTCCAAAAAGAACAGAAAGGTTGGTGGAAAAGACTTTTGAAAACAGAAGAAAAACCTGCTCCGTACTTGAAGGTTGATTGGAATAAATGGTGTGATGAGGATGAGTCAGACTCCACTTTGGCTTCTGATGACGACCTTGCATATATGGGCCAAGATGATGGAAGCGGTGAGGATGGAGGAATGCTATATCTCCCTGACTTGGAAAAGGCCAGAGGAAACTAG

Protein sequence

MSSRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGSIVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSTLASDDDLAYMGQDDGSGEDGGMLYLPDLEKARGN

Homology

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BLAST of Spg005047 vs. NCBI nr
Match: XP_022156832.1 (uncharacterized protein At3g03773 isoform X1 [Momordica charantia])

HSP 1 Score: 307.0 bits (785), Expect = 9.1e-80
Identity = 145/151 (96.03%), Postives = 147/151 (97.35%), Query Frame = 0


Query: 1   MSSRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS 60
           MSSRNPEVLWAQRSDKVYLT+ALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS
Sbjct: 1   MSSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS 60

Query: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSTLAS 120
           IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTE KPAPYLKVDWNKWCDEDESDST AS
Sbjct: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEAKPAPYLKVDWNKWCDEDESDSTSAS 120

Query: 121 DDDLAYMGQDDGSGEDGGMLYLPDLEKARGN 152
           DDDL YM QDDGSGEDGG+LYLPDLEKARGN
Sbjct: 121 DDDLEYMSQDDGSGEDGGLLYLPDLEKARGN 151

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BLAST of Spg005047 vs. NCBI nr
Match: XP_004136663.1 (co-chaperone protein p23-2 [Cucumis sativus] >KGN59490.1 hypothetical protein Csa_001660 [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 3.4e-79
Identity = 142/151 (94.04%), Postives = 147/151 (97.35%), Query Frame = 0


Query: 1   MSSRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS 60
           MSSRNPEVLWAQRSDKVYLT++LPDAKDISVKCEPHGLFSFSAKGLQG+SFDFTLELFGS
Sbjct: 1   MSSRNPEVLWAQRSDKVYLTVSLPDAKDISVKCEPHGLFSFSAKGLQGSSFDFTLELFGS 60

Query: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSTLAS 120
           IVPEGCKTKV LRNIICS+QKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDS L S
Sbjct: 61  IVPEGCKTKVSLRNIICSIQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSALTS 120

Query: 121 DDDLAYMGQDDGSGEDGGMLYLPDLEKARGN 152
           DD+L YMGQDDGSGEDGGMLYLPDLEKARGN
Sbjct: 121 DDELEYMGQDDGSGEDGGMLYLPDLEKARGN 151

[Close]

BLAST of Spg005047 vs. NCBI nr
Match: XP_038903422.1 (co-chaperone protein p23-2 [Benincasa hispida])

HSP 1 Score: 303.5 bits (776), Expect = 1.0e-78
Identity = 142/151 (94.04%), Postives = 146/151 (96.69%), Query Frame = 0


Query: 1   MSSRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS 60
           MSSR PEVLWAQRSDKVYLT++LPDAKDISVKCEPHGLFSFSAKGLQ +SFDFTLELFGS
Sbjct: 1   MSSRYPEVLWAQRSDKVYLTVSLPDAKDISVKCEPHGLFSFSAKGLQDSSFDFTLELFGS 60

Query: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSTLAS 120
           IVPEGCKTKVGLRNIICS+QKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDS L S
Sbjct: 61  IVPEGCKTKVGLRNIICSIQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSALTS 120

Query: 121 DDDLAYMGQDDGSGEDGGMLYLPDLEKARGN 152
           DDDL YMGQDDGSGEDGGMLYLPDLEKARGN
Sbjct: 121 DDDLGYMGQDDGSGEDGGMLYLPDLEKARGN 151

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BLAST of Spg005047 vs. NCBI nr
Match: XP_022156833.1 (uncharacterized protein At3g03773 isoform X2 [Momordica charantia])

HSP 1 Score: 303.5 bits (776), Expect = 1.0e-78
Identity = 143/149 (95.97%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGSIV 62
           SRNPEVLWAQRSDKVYLT+ALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGSIV
Sbjct: 2   SRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGSIV 61

Query: 63  PEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSTLASDD 122
           PEGCKTKVGLRNIICSVQKEQKGWWKRLLKTE KPAPYLKVDWNKWCDEDESDST ASDD
Sbjct: 62  PEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEAKPAPYLKVDWNKWCDEDESDSTSASDD 121

Query: 123 DLAYMGQDDGSGEDGGMLYLPDLEKARGN 152
           DL YM QDDGSGEDGG+LYLPDLEKARGN
Sbjct: 122 DLEYMSQDDGSGEDGGLLYLPDLEKARGN 150

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BLAST of Spg005047 vs. NCBI nr
Match: XP_008443308.1 (PREDICTED: uncharacterized protein At3g03773 [Cucumis melo])

HSP 1 Score: 300.4 bits (768), Expect = 8.5e-78
Identity = 140/151 (92.72%), Postives = 146/151 (96.69%), Query Frame = 0


Query: 1   MSSRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS 60
           MSSRNPEVLWAQRSD+VYLT++LPDAKDISVKCEPHGLFSFSAKGLQG+SFDFTLELFGS
Sbjct: 1   MSSRNPEVLWAQRSDRVYLTVSLPDAKDISVKCEPHGLFSFSAKGLQGSSFDFTLELFGS 60

Query: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSTLAS 120
           IVPEGCKTKV LRNIICS+QKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDS L S
Sbjct: 61  IVPEGCKTKVSLRNIICSIQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSALTS 120

Query: 121 DDDLAYMGQDDGSGEDGGMLYLPDLEKARGN 152
           DD+L YMGQDDGS EDGGMLYLPDLEKARGN
Sbjct: 121 DDELEYMGQDDGSVEDGGMLYLPDLEKARGN 151

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BLAST of Spg005047 vs. ExPASy Swiss-Prot
Match: Q6ID70 (Co-chaperone protein p23-2 OS=Arabidopsis thaliana OX=3702 GN=P23-2 PE=1 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.3e-57
Identity = 107/148 (72.30%), Postives = 124/148 (83.78%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGSIV 62
           SRNPEVLWAQRSDKVYLT+ALPDAKDISVKCEP GLFSFSA G QG  F+F+LEL+G I+
Sbjct: 2   SRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIM 61

Query: 63  PEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDES-DSTLASD 122
            E  +  VGLRNII S+QKE++ WW RLLK+EEKPAPY+KVDWNKWCDEDE  +S  ASD
Sbjct: 62  TE-YRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEEVNSETASD 121

Query: 123 DDLAYMGQDDGSGEDGGMLYLPDLEKAR 150
           D+ A++ QD  S +D G+LYLPDLEKAR
Sbjct: 122 DESAFVNQDSESSDDDGLLYLPDLEKAR 148

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BLAST of Spg005047 vs. ExPASy Swiss-Prot
Match: P0C8Z0 (Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_027940 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-27
Identity = 64/139 (46.04%), Postives = 87/139 (62.59%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSA-KGLQGASFDFTLELFGSI 62
           SR+PEV WAQR DKVY+T+ L DAKD  V  EP G+FSFSA  G  G  ++  LEL   +
Sbjct: 2   SRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDKV 61

Query: 63  VPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSTLASD 122
             E  K  VG+R+I C V+K +  WWK+L++ ++K   ++KVDW+KW DED+  + +  D
Sbjct: 62  NVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDGADVNVD 121

Query: 123 D-DLAYMGQDDGSGEDGGM 140
             D +  G   G G  GGM
Sbjct: 122 GMDFSNFGGMGGMGGMGGM 140

[Close]

BLAST of Spg005047 vs. ExPASy Swiss-Prot
Match: Q6YYB0 (Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0359500 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-27
Identity = 64/139 (46.04%), Postives = 87/139 (62.59%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSA-KGLQGASFDFTLELFGSI 62
           SR+PEV WAQR DKVY+T+ L DAKD  V  EP G+FSFSA  G  G  ++  LEL   +
Sbjct: 2   SRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDKV 61

Query: 63  VPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSTLASD 122
             E  K  VG+R+I C V+K +  WWK+L++ ++K   ++KVDW+KW DED+  + +  D
Sbjct: 62  NVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDGADVNVD 121

Query: 123 D-DLAYMGQDDGSGEDGGM 140
             D +  G   G G  GGM
Sbjct: 122 GMDFSNFGGMGGMGGMGGM 140

[Close]

BLAST of Spg005047 vs. ExPASy Swiss-Prot
Match: Q8L7U4 (Co-chaperone protein p23-1 OS=Arabidopsis thaliana OX=3702 GN=P23-1 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 8.7e-25
Identity = 59/138 (42.75%), Postives = 85/138 (61.59%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSAK-GLQGASFDFTLELFGSI 62
           SR+PEV WA+ ++K++LT+ L D KD  V  +P G+F FSAK G +   ++  LEL   +
Sbjct: 2   SRHPEVKWAETTEKIFLTVVLADTKDTKVNLDPEGVFDFSAKVGPENHVYELKLELADKV 61

Query: 63  VPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSTLASD 122
             E  K  +G R+I C ++K +   W +LL+  +KP  Y+KVDW+KW DED+  S  A+D
Sbjct: 62  NVEESKINIGERSIFCIIEKAEPERWNKLLRV-KKPPHYVKVDWDKWVDEDDEGSAGAAD 121

Query: 123 DDLAYMGQDDGSGEDGGM 140
            D+A M    G G  GGM
Sbjct: 122 MDMAGMEGMGGMGGMGGM 138

[Close]

BLAST of Spg005047 vs. ExPASy Swiss-Prot
Match: Q9FR62 (Co-chaperone protein p23-1 OS=Brassica napus OX=3708 GN=P23-1 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 5.6e-24
Identity = 61/142 (42.96%), Postives = 78/142 (54.93%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSA-KGLQGASFDFTLELFGSI 62
           SR+P V WAQRSD VY+T+ LPDA+D+ +K EP G F FSA  G     ++  L+L  S+
Sbjct: 2   SRHPTVKWAQRSDWVYITVELPDAEDVKLKLEPEGKFFFSATSGASKTLYEVDLDLLDSV 61

Query: 63  VPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSTLASD 122
                K  V  R++   V+K +  WW RL K E K   YLKVDW+KW DED+ D     D
Sbjct: 62  DVNESKASVSSRSVFYLVKKAESKWWNRLTKPEGKHPLYLKVDWDKWVDEDDEDKGGEGD 121

Query: 123 DDLA-------YMGQDDGSGED 137
            D          MG  D  GE+
Sbjct: 122 MDFGDFDFNGLNMGDTDEIGEE 143

[Close]

BLAST of Spg005047 vs. ExPASy TrEMBL
Match: A0A6J1DT06 (uncharacterized protein At3g03773 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023666 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 4.4e-80
Identity = 145/151 (96.03%), Postives = 147/151 (97.35%), Query Frame = 0


Query: 1   MSSRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS 60
           MSSRNPEVLWAQRSDKVYLT+ALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS
Sbjct: 1   MSSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS 60

Query: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSTLAS 120
           IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTE KPAPYLKVDWNKWCDEDESDST AS
Sbjct: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEAKPAPYLKVDWNKWCDEDESDSTSAS 120

Query: 121 DDDLAYMGQDDGSGEDGGMLYLPDLEKARGN 152
           DDDL YM QDDGSGEDGG+LYLPDLEKARGN
Sbjct: 121 DDDLEYMSQDDGSGEDGGLLYLPDLEKARGN 151

[Close]

BLAST of Spg005047 vs. ExPASy TrEMBL
Match: A0A0A0LBV6 (CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G822410 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.7e-79
Identity = 142/151 (94.04%), Postives = 147/151 (97.35%), Query Frame = 0


Query: 1   MSSRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS 60
           MSSRNPEVLWAQRSDKVYLT++LPDAKDISVKCEPHGLFSFSAKGLQG+SFDFTLELFGS
Sbjct: 1   MSSRNPEVLWAQRSDKVYLTVSLPDAKDISVKCEPHGLFSFSAKGLQGSSFDFTLELFGS 60

Query: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSTLAS 120
           IVPEGCKTKV LRNIICS+QKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDS L S
Sbjct: 61  IVPEGCKTKVSLRNIICSIQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSALTS 120

Query: 121 DDDLAYMGQDDGSGEDGGMLYLPDLEKARGN 152
           DD+L YMGQDDGSGEDGGMLYLPDLEKARGN
Sbjct: 121 DDELEYMGQDDGSGEDGGMLYLPDLEKARGN 151

[Close]

BLAST of Spg005047 vs. ExPASy TrEMBL
Match: A0A6J1DRP7 (uncharacterized protein At3g03773 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023666 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 4.9e-79
Identity = 143/149 (95.97%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGSIV 62
           SRNPEVLWAQRSDKVYLT+ALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGSIV
Sbjct: 2   SRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGSIV 61

Query: 63  PEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSTLASDD 122
           PEGCKTKVGLRNIICSVQKEQKGWWKRLLKTE KPAPYLKVDWNKWCDEDESDST ASDD
Sbjct: 62  PEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEAKPAPYLKVDWNKWCDEDESDSTSASDD 121

Query: 123 DLAYMGQDDGSGEDGGMLYLPDLEKARGN 152
           DL YM QDDGSGEDGG+LYLPDLEKARGN
Sbjct: 122 DLEYMSQDDGSGEDGGLLYLPDLEKARGN 150

[Close]

BLAST of Spg005047 vs. ExPASy TrEMBL
Match: A0A1S3B789 (uncharacterized protein At3g03773 OS=Cucumis melo OX=3656 GN=LOC103486928 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.1e-78
Identity = 140/151 (92.72%), Postives = 146/151 (96.69%), Query Frame = 0


Query: 1   MSSRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS 60
           MSSRNPEVLWAQRSD+VYLT++LPDAKDISVKCEPHGLFSFSAKGLQG+SFDFTLELFGS
Sbjct: 1   MSSRNPEVLWAQRSDRVYLTVSLPDAKDISVKCEPHGLFSFSAKGLQGSSFDFTLELFGS 60

Query: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSTLAS 120
           IVPEGCKTKV LRNIICS+QKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDS L S
Sbjct: 61  IVPEGCKTKVSLRNIICSIQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSALTS 120

Query: 121 DDDLAYMGQDDGSGEDGGMLYLPDLEKARGN 152
           DD+L YMGQDDGS EDGGMLYLPDLEKARGN
Sbjct: 121 DDELEYMGQDDGSVEDGGMLYLPDLEKARGN 151

[Close]

BLAST of Spg005047 vs. ExPASy TrEMBL
Match: A0A6J1J757 (uncharacterized protein At3g03773 OS=Cucurbita maxima OX=3661 GN=LOC111482362 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.5e-77
Identity = 141/150 (94.00%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1   MSSRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS 60
           MSSRNPEVLWAQRSDKVYLT+ALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS
Sbjct: 1   MSSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS 60

Query: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSTLAS 120
           IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLK+EEKPAPYLKVDWNKWCDEDESDS L S
Sbjct: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKSEEKPAPYLKVDWNKWCDEDESDSALTS 120

Query: 121 DDDLAYMGQDDGSGEDGGMLYLPDLEKARG 151
           DDDLA MG DDGSGEDGGMLYLPDL+K  G
Sbjct: 121 DDDLADMGLDDGSGEDGGMLYLPDLKKVGG 150

[Close]

BLAST of Spg005047 vs. TAIR 10
Match: AT3G03773.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 223.0 bits (567), Expect = 1.6e-58
Identity = 107/148 (72.30%), Postives = 124/148 (83.78%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGSIV 62
           SRNPEVLWAQRSDKVYLT+ALPDAKDISVKCEP GLFSFSA G QG  F+F+LEL+G I+
Sbjct: 2   SRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIM 61

Query: 63  PEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDES-DSTLASD 122
            E  +  VGLRNII S+QKE++ WW RLLK+EEKPAPY+KVDWNKWCDEDE  +S  ASD
Sbjct: 62  TE-YRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEEVNSETASD 121

Query: 123 DDLAYMGQDDGSGEDGGMLYLPDLEKAR 150
           D+ A++ QD  S +D G+LYLPDLEKAR
Sbjct: 122 DESAFVNQDSESSDDDGLLYLPDLEKAR 148

[Close]

BLAST of Spg005047 vs. TAIR 10
Match: AT3G03773.2 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 221.5 bits (563), Expect = 4.7e-58
Identity = 106/147 (72.11%), Postives = 123/147 (83.67%), Query Frame = 0


Query: 4   RNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGSIVP 63
           RNPEVLWAQRSDKVYLT+ALPDAKDISVKCEP GLFSFSA G QG  F+F+LEL+G I+ 
Sbjct: 57  RNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIMT 116

Query: 64  EGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDES-DSTLASDD 123
           E  +  VGLRNII S+QKE++ WW RLLK+EEKPAPY+KVDWNKWCDEDE  +S  ASDD
Sbjct: 117 E-YRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEEVNSETASDD 176

Query: 124 DLAYMGQDDGSGEDGGMLYLPDLEKAR 150
           + A++ QD  S +D G+LYLPDLEKAR
Sbjct: 177 ESAFVNQDSESSDDDGLLYLPDLEKAR 202

[Close]

BLAST of Spg005047 vs. TAIR 10
Match: AT4G02450.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 6.2e-26
Identity = 59/138 (42.75%), Postives = 85/138 (61.59%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSAK-GLQGASFDFTLELFGSI 62
           SR+PEV WA+ ++K++LT+ L D KD  V  +P G+F FSAK G +   ++  LEL   +
Sbjct: 2   SRHPEVKWAETTEKIFLTVVLADTKDTKVNLDPEGVFDFSAKVGPENHVYELKLELADKV 61

Query: 63  VPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSTLASD 122
             E  K  +G R+I C ++K +   W +LL+  +KP  Y+KVDW+KW DED+  S  A+D
Sbjct: 62  NVEESKINIGERSIFCIIEKAEPERWNKLLRV-KKPPHYVKVDWDKWVDEDDEGSAGAAD 121

Query: 123 DDLAYMGQDDGSGEDGGM 140
            D+A M    G G  GGM
Sbjct: 122 MDMAGMEGMGGMGGMGGM 138

[Close]

BLAST of Spg005047 vs. TAIR 10
Match: AT4G02450.2 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 6.2e-26
Identity = 59/138 (42.75%), Postives = 85/138 (61.59%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKVYLTIALPDAKDISVKCEPHGLFSFSAK-GLQGASFDFTLELFGSI 62
           SR+PEV WA+ ++K++LT+ L D KD  V  +P G+F FSAK G +   ++  LEL   +
Sbjct: 2   SRHPEVKWAETTEKIFLTVVLADTKDTKVNLDPEGVFDFSAKVGPENHVYELKLELADKV 61

Query: 63  VPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSTLASD 122
             E  K  +G R+I C ++K +   W +LL+  +KP  Y+KVDW+KW DED+  S  A+D
Sbjct: 62  NVEESKINIGERSIFCIIEKAEPERWNKLLRV-KKPPHYVKVDWDKWVDEDDEGSAGAAD 121

Query: 123 DDLAYMGQDDGSGEDGGM 140
            D+A M    G G  GGM
Sbjct: 122 MDMAGMEGMGGMGGMGGM 138

[Close]

BLAST of Spg005047 vs. TAIR 10
Match: AT1G30070.1 (SGS domain-containing protein )

HSP 1 Score: 41.2 bits (95), Expect = 8.6e-04
Identity = 28/96 (29.17%), Postives = 47/96 (48.96%), Query Frame = 0


Query: 10  WAQRSDKVYLTIALPDAKDISVKCE--PHGLFSFSAKGLQGASFDFTL-ELFGSIVPEGC 69
           W Q +DKV + I+L    +  V+ E  P  L       +QG ++   + +L   I+PE C
Sbjct: 81  WDQDNDKVKMYISLEGVDEDKVQAEFKPMSL-DIKIHDVQGKNYRCAIPKLCKEIMPEKC 140

Query: 70  KTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLK 103
           K  V  + I+ ++ K  +G W  +   E+K  P L+
Sbjct: 141 KVLVKPKRIVITMVKSSRGNWLDIHHKEDKIKPSLE 175

The following BLAST results are available for this feature:

BLAST of Spg005047 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156832.1	9.1e-80	96.03	uncharacterized protein At3g03773 isoform X1 [Momordica charantia]	[more]
XP_004136663.1	3.4e-79	94.04	co-chaperone protein p23-2 [Cucumis sativus] >KGN59490.1 hypothetical protein Cs...	[more]
XP_038903422.1	1.0e-78	94.04	co-chaperone protein p23-2 [Benincasa hispida]	[more]
XP_022156833.1	1.0e-78	95.97	uncharacterized protein At3g03773 isoform X2 [Momordica charantia]	[more]
XP_008443308.1	8.5e-78	92.72	PREDICTED: uncharacterized protein At3g03773 [Cucumis melo]	[more]

BLAST of Spg005047 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6ID70	2.3e-57	72.30	Co-chaperone protein p23-2 OS=Arabidopsis thaliana OX=3702 GN=P23-2 PE=1 SV=1	[more]
P0C8Z0	1.1e-27	46.04	Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica OX=39946 GN=OsI...	[more]
Q6YYB0	1.1e-27	46.04	Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q8L7U4	8.7e-25	42.75	Co-chaperone protein p23-1 OS=Arabidopsis thaliana OX=3702 GN=P23-1 PE=1 SV=1	[more]
Q9FR62	5.6e-24	42.96	Co-chaperone protein p23-1 OS=Brassica napus OX=3708 GN=P23-1 PE=1 SV=1	[more]

BLAST of Spg005047 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DT06	4.4e-80	96.03	uncharacterized protein At3g03773 isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A0A0LBV6	1.7e-79	94.04	CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G822410 PE=4 SV=...	[more]
A0A6J1DRP7	4.9e-79	95.97	uncharacterized protein At3g03773 isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A1S3B789	4.1e-78	92.72	uncharacterized protein At3g03773 OS=Cucumis melo OX=3656 GN=LOC103486928 PE=4 S...	[more]
A0A6J1J757	3.5e-77	94.00	uncharacterized protein At3g03773 OS=Cucurbita maxima OX=3661 GN=LOC111482362 PE...	[more]

BLAST of Spg005047 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03773.1	1.6e-58	72.30	HSP20-like chaperones superfamily protein	[more]
AT3G03773.2	4.7e-58	72.11	HSP20-like chaperones superfamily protein	[more]
AT4G02450.1	6.2e-26	42.75	HSP20-like chaperones superfamily protein	[more]
AT4G02450.2	6.2e-26	42.75	HSP20-like chaperones superfamily protein	[more]
AT1G30070.1	8.6e-04	29.17	SGS domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007052	CS domain	PFAM	PF04969	CS	coord: 8..81 e-value: 1.7E-7 score: 32.1
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 3..91 score: 16.589046
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 2..106 e-value: 2.8E-33 score: 116.7
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 5..138
None	No IPR available	GENE3D	6.10.140.350		coord: 107..151 e-value: 1.9E-19 score: 71.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..151
None	No IPR available	PANTHER	PTHR22932:SF15	CO-CHAPERONE PROTEIN P23-2	coord: 1..150
None	No IPR available	PANTHER	PTHR22932	TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE	coord: 1..150
None	No IPR available	CDD	cd06465	p23_hB-ind1_like	coord: 6..113 e-value: 2.23343E-46 score: 144.66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg005047.1	Spg005047.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051131	chaperone-mediated protein complex assembly
biological_process	GO:0006457	protein folding
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0051879	Hsp90 protein binding