Spg005026 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg005026
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSecretion protein HlyD family protein
Locationscaffold4: 10851002 .. 10852812 (+)
RNA-Seq ExpressionSpg005026
SyntenySpg005026
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCATACCGGTGTGGTGCAAGCCACACACACATTAATGCTTAAGTCAGTTTCTGGAGGAGAGAAAATAACAATCGCCCAAGAGTAACAGAGTTGTACCTGCTATATTCTACTTCCCTTTTTCGGATCCCCATCTTCAGGTGGCTTAGATGTGTATTTATATTCTTTCTTGCTAGGGTTTACCTCGAAGCTCTGGGAGACGAAGACGAGCTATTTCACGACTGGCCTAGGCCCATGCATCTGGCTGGCCTCGGCTGCCGAGGCGGAAGAGGAGCGTGGGTGGGCCACGTGCCTCCCTTTTCCTTCGCTTGCGACGTGCCGCTCTTTGATAGTTGGGTCTGCTATTTTCGGGTATTATGTACCATTGGGCCACTGATGGTTTTACCCATAACATTAAGCCACTATTCCCTAATGGAAATTTAAACACAATTCAATCAATTATGGCTGAAGATAGCCTTGGATTCAATTAGAGAGTTGACTAGCTGCTTGTAACCTACTTCAACATAAAAATTTCTTTATTCATTCGAGGTCTCAATTCCGACTTCTGGGTGTTTTGTATGTAGAAATAGTTTTTTAATATATTTTTTTAATTGCCTTCTTCCGGGAGGTTAATGTTAGATTTTTCGTTATGGTTGTAGGTCCAAAGGGGGTTTCCTCGTTGATTTTGGACCTAGTTAAGGTAACAGATAGTTGGAATCTCGTTAGAGGAAAAAGACAAATAGTAGAGGACGAAAATGGATAACTAGCCGAGGTAGCCTACCGTGCTTGGCACGGCTGCACGCCTGCTACAGGTGCAGTAGGCACGCTTGGGCCTCGACCTATTGCCGAGGCCGAGCAACCTATTTATATATATATATATATATATATATATCCTCGTTTAGTCTTTGGCGAGCACCGAAAAGCCAAAAGTGCTCGTAGTGAGGCAGGGGACATCCTAAGCTAATGTGACGATCGTCACGAAAGACGAAGAAATCGATGCTCCTTTCATCACTACATGGTCCTCTGCTGCAGGGCTCCAAAGATCCACAAGAAATAGACGACCTCCTGCTCCCACCTCTACCGAAGAAAGAGAGAGAGAGATTCCCGCGTTCGCTCTTCCTGAAAACTATTCTGGTGCTGAGAATGAGGTGGAGATGCTTAGACAGGATCTATTTTGCTGGCAGGGGCTGCAGTCTCGTAAACCAGAAGGTGAGCTAGGTTATGATGATCCTTCCTAGGGCATCCTGGGTGCCCATCAACAACTCCGCGAGGTTAGTCATCACTTTCATCCTAAAATAAATTGCTTAATTCCCTACTTGCTCATTTATTCTATCCATGACTAATTTGCTCCTTTCTCCTGGGCAGGCCTTTACTCGGATGACCGTCTCTTCCATCAGTCTGGTGAACAAAATCAATGAACTTCAATGGAATAGTGTTCCCCGCAGTGAACTCTTCCAAGCTCAAAGTAGGCTTGATCGTGCCAATCGTTTATTGGAGGAGGTTAAGGCTGACTTGGAGTCTAATAAGACCAAACTCAGCAGGACCAAGACCCAATTAGCTGAGGCGAAGGCTCACCTGGCCGATGACAAATTCCTCGCTGAGGCATTTAAGAAGACGGATGAGTTCATTCTAATGCAAAACGAAATATGGGATGATGGGGAAAAATGGGCTCTTAAACGTGTTGGAAAGCCTGACCCCACCTTTGACCCTTTTATTGTACGTAGGGAGATTTCCACTATGCTGACTGACCCCAACGCTTTTTCGGTTTCTGATGGCTCCTCGGGAGGGAGAGATGTCATGGATATCCCTTCAGAAGATGAAAACAATTAA

mRNA sequence

ATGTTGCATACCGGTGTGGTGCAAGCCACACACACATTAATGCTTAAGTCAGTTTCTGGAGGAGAGAAAATAACAATCGCCCAAGAGGTTTACCTCGAAGCTCTGGGAGACGAAGACGAGCTATTTCACGACTGGCCTAGGCCCATGCATCTGGCTGGCCTCGGCTGCCGAGGCGGAAGAGGAGCGTGGGTGGGCCACGTGCCTCCCTTTTCCTTCGCTTGCGACGTGCCGCTCTTTGATAGTTGGGTCTGCTATTTTCGGGTATTATGTCCAAAGGGGGTTTCCTCGTTGATTTTGGACCTAGTTAAGGGCTCCAAAGATCCACAAGAAATAGACGACCTCCTGCTCCCACCTCTACCGAAGAAAGAGAGAGAGAGATTCCCGCGTTCGCTCTTCCTGAAAACTATTCTGGTGCTGAGAATGAGGTGGAGATGCTTAGACAGGATCTATTTTGCTGGCAGGGGCTGCAGTCTCGTAAACCAGAAGGCCTTTACTCGGATGACCGTCTCTTCCATCAGTCTGGTGAACAAAATCAATGAACTTCAATGGAATAGTGTTCCCCGCAGTGAACTCTTCCAAGCTCAAAGTAGGCTTGATCGTGCCAATCGTTTATTGGAGGAGGTTAAGGCTGACTTGGAGTCTAATAAGACCAAACTCAGCAGGACCAAGACCCAATTAGCTGAGGCGAAGGCTCACCTGGCCGATGACAAATTCCTCGCTGAGGCATTTAAGAAGACGGATGAGTTCATTCTAATGCAAAACGAAATATGGGATGATGGGGAAAAATGGGCTCTTAAACGTGTTGGAAAGCCTGACCCCACCTTTGACCCTTTTATTGTACGTAGGGAGATTTCCACTATGCTGACTGACCCCAACGCTTTTTCGGTTTCTGATGGCTCCTCGGGAGGGAGAGATGTCATGGATATCCCTTCAGAAGATGAAAACAATTAA

Coding sequence (CDS)

ATGTTGCATACCGGTGTGGTGCAAGCCACACACACATTAATGCTTAAGTCAGTTTCTGGAGGAGAGAAAATAACAATCGCCCAAGAGGTTTACCTCGAAGCTCTGGGAGACGAAGACGAGCTATTTCACGACTGGCCTAGGCCCATGCATCTGGCTGGCCTCGGCTGCCGAGGCGGAAGAGGAGCGTGGGTGGGCCACGTGCCTCCCTTTTCCTTCGCTTGCGACGTGCCGCTCTTTGATAGTTGGGTCTGCTATTTTCGGGTATTATGTCCAAAGGGGGTTTCCTCGTTGATTTTGGACCTAGTTAAGGGCTCCAAAGATCCACAAGAAATAGACGACCTCCTGCTCCCACCTCTACCGAAGAAAGAGAGAGAGAGATTCCCGCGTTCGCTCTTCCTGAAAACTATTCTGGTGCTGAGAATGAGGTGGAGATGCTTAGACAGGATCTATTTTGCTGGCAGGGGCTGCAGTCTCGTAAACCAGAAGGCCTTTACTCGGATGACCGTCTCTTCCATCAGTCTGGTGAACAAAATCAATGAACTTCAATGGAATAGTGTTCCCCGCAGTGAACTCTTCCAAGCTCAAAGTAGGCTTGATCGTGCCAATCGTTTATTGGAGGAGGTTAAGGCTGACTTGGAGTCTAATAAGACCAAACTCAGCAGGACCAAGACCCAATTAGCTGAGGCGAAGGCTCACCTGGCCGATGACAAATTCCTCGCTGAGGCATTTAAGAAGACGGATGAGTTCATTCTAATGCAAAACGAAATATGGGATGATGGGGAAAAATGGGCTCTTAAACGTGTTGGAAAGCCTGACCCCACCTTTGACCCTTTTATTGTACGTAGGGAGATTTCCACTATGCTGACTGACCCCAACGCTTTTTCGGTTTCTGATGGCTCCTCGGGAGGGAGAGATGTCATGGATATCCCTTCAGAAGATGAAAACAATTAA

Protein sequence

MLHTGVVQATHTLMLKSVSGGEKITIAQEVYLEALGDEDELFHDWPRPMHLAGLGCRGGRGAWVGHVPPFSFACDVPLFDSWVCYFRVLCPKGVSSLILDLVKGSKDPQEIDDLLLPPLPKKERERFPRSLFLKTILVLRMRWRCLDRIYFAGRGCSLVNQKAFTRMTVSSISLVNKINELQWNSVPRSELFQAQSRLDRANRLLEEVKADLESNKTKLSRTKTQLAEAKAHLADDKFLAEAFKKTDEFILMQNEIWDDGEKWALKRVGKPDPTFDPFIVRREISTMLTDPNAFSVSDGSSGGRDVMDIPSEDENN
Homology
[Close]
BLAST of Spg005026 vs. NCBI nr
Match: TYK01274.1 (Secretion protein HlyD family protein [Cucumis melo var. makuwa])

HSP 1 Score: 87.0 bits (214), Expect = 3.1e-13
Identity = 50/120 (41.67%), Postives = 74/120 (61.67%), Query Frame = 0 

Query: 161 QKAFTRMTVSSISLVNKINELQWNSVPRSELFQAQSRLDRANRLLEEVKADL----ESNK 220
           ++AFTR ++S   + +++N L  N VPR EL        RANR LEE K +L     S++
Sbjct: 156 RRAFTRFSISFGRMGDELNHLYLNYVPREELM-------RANRRLEEAKVELGLCQASSQ 215

Query: 221 TKLSRTKTQLAEAKAHLADDKFLAEAFKKTDEFILMQNEIWDDGEKWALKRVGKPDPTFD 277
            K+ + K QLAEAK+ L+D K LAE F KT+EF++MQN+I + G  W++++     P  D
Sbjct: 216 VKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGID 268

[Close]
BLAST of Spg005026 vs. NCBI nr
Match: XP_016902110.1 (PREDICTED: uncharacterized protein LOC103497199 isoform X3 [Cucumis melo])

HSP 1 Score: 87.0 bits (214), Expect = 3.1e-13
Identity = 50/120 (41.67%), Postives = 74/120 (61.67%), Query Frame = 0 

Query: 161 QKAFTRMTVSSISLVNKINELQWNSVPRSELFQAQSRLDRANRLLEEVKADL----ESNK 220
           ++AFTR ++S   + +++N L  N VPR EL        RANR LEE K +L     S++
Sbjct: 172 RRAFTRFSISFGRMGDELNHLYLNYVPREELM-------RANRRLEEAKVELGLCQASSQ 231

Query: 221 TKLSRTKTQLAEAKAHLADDKFLAEAFKKTDEFILMQNEIWDDGEKWALKRVGKPDPTFD 277
            K+ + K QLAEAK+ L+D K LAE F KT+EF++MQN+I + G  W++++     P  D
Sbjct: 232 VKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGID 284

[Close]
BLAST of Spg005026 vs. NCBI nr
Match: XP_008457530.1 (PREDICTED: uncharacterized protein LOC103497199 isoform X1 [Cucumis melo])

HSP 1 Score: 87.0 bits (214), Expect = 3.1e-13
Identity = 50/120 (41.67%), Postives = 74/120 (61.67%), Query Frame = 0 

Query: 161 QKAFTRMTVSSISLVNKINELQWNSVPRSELFQAQSRLDRANRLLEEVKADL----ESNK 220
           ++AFTR ++S   + +++N L  N VPR EL        RANR LEE K +L     S++
Sbjct: 217 RRAFTRFSISFGRMGDELNHLYLNYVPREELM-------RANRRLEEAKVELGLCQASSQ 276

Query: 221 TKLSRTKTQLAEAKAHLADDKFLAEAFKKTDEFILMQNEIWDDGEKWALKRVGKPDPTFD 277
            K+ + K QLAEAK+ L+D K LAE F KT+EF++MQN+I + G  W++++     P  D
Sbjct: 277 VKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGID 329

[Close]
BLAST of Spg005026 vs. NCBI nr
Match: KAA0033890.1 (Secretion protein HlyD family protein [Cucumis melo var. makuwa])

HSP 1 Score: 87.0 bits (214), Expect = 3.1e-13
Identity = 50/120 (41.67%), Postives = 74/120 (61.67%), Query Frame = 0 

Query: 161 QKAFTRMTVSSISLVNKINELQWNSVPRSELFQAQSRLDRANRLLEEVKADL----ESNK 220
           ++AFTR ++S   + +++N L  N VPR EL        RANR LEE K +L     S++
Sbjct: 207 RRAFTRFSISFGRMGDELNHLYLNYVPREELM-------RANRRLEEAKVELGLCQASSQ 266

Query: 221 TKLSRTKTQLAEAKAHLADDKFLAEAFKKTDEFILMQNEIWDDGEKWALKRVGKPDPTFD 277
            K+ + K QLAEAK+ L+D K LAE F KT+EF++MQN+I + G  W++++     P  D
Sbjct: 267 VKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGID 319

[Close]
BLAST of Spg005026 vs. NCBI nr
Match: XP_008457532.1 (PREDICTED: uncharacterized protein LOC103497199 isoform X2 [Cucumis melo])

HSP 1 Score: 87.0 bits (214), Expect = 3.1e-13
Identity = 50/120 (41.67%), Postives = 74/120 (61.67%), Query Frame = 0 

Query: 161 QKAFTRMTVSSISLVNKINELQWNSVPRSELFQAQSRLDRANRLLEEVKADL----ESNK 220
           ++AFTR ++S   + +++N L  N VPR EL        RANR LEE K +L     S++
Sbjct: 184 RRAFTRFSISFGRMGDELNHLYLNYVPREELM-------RANRRLEEAKVELGLCQASSQ 243

Query: 221 TKLSRTKTQLAEAKAHLADDKFLAEAFKKTDEFILMQNEIWDDGEKWALKRVGKPDPTFD 277
            K+ + K QLAEAK+ L+D K LAE F KT+EF++MQN+I + G  W++++     P  D
Sbjct: 244 VKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGID 296

[Close]
BLAST of Spg005026 vs. ExPASy TrEMBL
Match: A0A5A7SSF9 (Secretion protein HlyD family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43059G00750 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-13
Identity = 50/120 (41.67%), Postives = 74/120 (61.67%), Query Frame = 0 

Query: 161 QKAFTRMTVSSISLVNKINELQWNSVPRSELFQAQSRLDRANRLLEEVKADL----ESNK 220
           ++AFTR ++S   + +++N L  N VPR EL        RANR LEE K +L     S++
Sbjct: 207 RRAFTRFSISFGRMGDELNHLYLNYVPREELM-------RANRRLEEAKVELGLCQASSQ 266

Query: 221 TKLSRTKTQLAEAKAHLADDKFLAEAFKKTDEFILMQNEIWDDGEKWALKRVGKPDPTFD 277
            K+ + K QLAEAK+ L+D K LAE F KT+EF++MQN+I + G  W++++     P  D
Sbjct: 267 VKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGID 319

[Close]
BLAST of Spg005026 vs. ExPASy TrEMBL
Match: A0A5D3BQ22 (Secretion protein HlyD family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00610 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-13
Identity = 50/120 (41.67%), Postives = 74/120 (61.67%), Query Frame = 0 

Query: 161 QKAFTRMTVSSISLVNKINELQWNSVPRSELFQAQSRLDRANRLLEEVKADL----ESNK 220
           ++AFTR ++S   + +++N L  N VPR EL        RANR LEE K +L     S++
Sbjct: 156 RRAFTRFSISFGRMGDELNHLYLNYVPREELM-------RANRRLEEAKVELGLCQASSQ 215

Query: 221 TKLSRTKTQLAEAKAHLADDKFLAEAFKKTDEFILMQNEIWDDGEKWALKRVGKPDPTFD 277
            K+ + K QLAEAK+ L+D K LAE F KT+EF++MQN+I + G  W++++     P  D
Sbjct: 216 VKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGID 268

[Close]
BLAST of Spg005026 vs. ExPASy TrEMBL
Match: A0A1S3C5B2 (uncharacterized protein LOC103497199 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497199 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-13
Identity = 50/120 (41.67%), Postives = 74/120 (61.67%), Query Frame = 0 

Query: 161 QKAFTRMTVSSISLVNKINELQWNSVPRSELFQAQSRLDRANRLLEEVKADL----ESNK 220
           ++AFTR ++S   + +++N L  N VPR EL        RANR LEE K +L     S++
Sbjct: 217 RRAFTRFSISFGRMGDELNHLYLNYVPREELM-------RANRRLEEAKVELGLCQASSQ 276

Query: 221 TKLSRTKTQLAEAKAHLADDKFLAEAFKKTDEFILMQNEIWDDGEKWALKRVGKPDPTFD 277
            K+ + K QLAEAK+ L+D K LAE F KT+EF++MQN+I + G  W++++     P  D
Sbjct: 277 VKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGID 329

[Close]
BLAST of Spg005026 vs. ExPASy TrEMBL
Match: A0A1S4E2A9 (uncharacterized protein LOC103497199 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497199 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-13
Identity = 50/120 (41.67%), Postives = 74/120 (61.67%), Query Frame = 0 

Query: 161 QKAFTRMTVSSISLVNKINELQWNSVPRSELFQAQSRLDRANRLLEEVKADL----ESNK 220
           ++AFTR ++S   + +++N L  N VPR EL        RANR LEE K +L     S++
Sbjct: 172 RRAFTRFSISFGRMGDELNHLYLNYVPREELM-------RANRRLEEAKVELGLCQASSQ 231

Query: 221 TKLSRTKTQLAEAKAHLADDKFLAEAFKKTDEFILMQNEIWDDGEKWALKRVGKPDPTFD 277
            K+ + K QLAEAK+ L+D K LAE F KT+EF++MQN+I + G  W++++     P  D
Sbjct: 232 VKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGID 284

[Close]
BLAST of Spg005026 vs. ExPASy TrEMBL
Match: A0A1S3C5V5 (uncharacterized protein LOC103497199 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497199 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-13
Identity = 50/120 (41.67%), Postives = 74/120 (61.67%), Query Frame = 0 

Query: 161 QKAFTRMTVSSISLVNKINELQWNSVPRSELFQAQSRLDRANRLLEEVKADL----ESNK 220
           ++AFTR ++S   + +++N L  N VPR EL        RANR LEE K +L     S++
Sbjct: 184 RRAFTRFSISFGRMGDELNHLYLNYVPREELM-------RANRRLEEAKVELGLCQASSQ 243

Query: 221 TKLSRTKTQLAEAKAHLADDKFLAEAFKKTDEFILMQNEIWDDGEKWALKRVGKPDPTFD 277
            K+ + K QLAEAK+ L+D K LAE F KT+EF++MQN+I + G  W++++     P  D
Sbjct: 244 VKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKIMECGVNWSVRQASIEHPGID 296

The following BLAST results are available for this feature:
BLAST of Spg005026 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK01274.13.1e-1341.67Secretion protein HlyD family protein [Cucumis melo var. makuwa][more]
XP_016902110.13.1e-1341.67PREDICTED: uncharacterized protein LOC103497199 isoform X3 [Cucumis melo][more]
XP_008457530.13.1e-1341.67PREDICTED: uncharacterized protein LOC103497199 isoform X1 [Cucumis melo][more]
KAA0033890.13.1e-1341.67Secretion protein HlyD family protein [Cucumis melo var. makuwa][more]
XP_008457532.13.1e-1341.67PREDICTED: uncharacterized protein LOC103497199 isoform X2 [Cucumis melo][more]
BLAST of Spg005026 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg005026 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SSF91.5e-1341.67Secretion protein HlyD family protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5D3BQ221.5e-1341.67Secretion protein HlyD family protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S3C5B21.5e-1341.67uncharacterized protein LOC103497199 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S4E2A91.5e-1341.67uncharacterized protein LOC103497199 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3C5V51.5e-1341.67uncharacterized protein LOC103497199 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of Spg005026 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 191..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 292..316

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg005026.1Spg005026.1mRNA