Spg004976 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGTGTTTGTTGGAGAGATCGTTGACGAACTGTTCGTTGAGGATCATAGTGCTGAGACGTTCTTGGGCTTCAACAAGTAAGTTATTCTAATCTAAAATAGTTTTAGATATGAATAAACACATGTTTAATCTAATTTTTGTTGTTTAGAAATAGTTTTTGAATTTTGCCCAATGTATTGGTTATCTATGGACAAAATTATTCACAACGATTTAATTCGCTTCTGCTAAAGGATTCAATTCCTTCAAGAGGAAGCATGGAACTCCCTGTTGGGAGAGCTTGGCGTAGAAGGCGAAGCCTTGCGCCAGAAAGAAGCTGAAGCAAAGACTGCGGCAGATGAAGCTGCCAACAAAGCCGCAGAAGAAGTAGCTGCGAAAGAAAAAGAATGCGCTGAGGAGGAAGCACATATTAAGGCCGCGGAGGAGTTAGCCGCAGCAAGTCTAGCTGAAATCGCAGCGGCCCTAAATTCTCCGCCACGTGAGTCAACGTCGCCTGAGTCCGAAGATAACCTTCCGCTGACTCATCGCCGCAATTTGCAAGCAGCTGCGCTGGCTATTAGCGAGCCTTCAGAGAGCCATGCACTAGGCCCCCCCAAAAGAAAAAGGGCATCCACCGCATCCAAGGGCAAGGTGAAGGCTGGCGAGGAAAAAGTCAATTTCATTGAAGAGCGGGGTTTTAGCTGCAAGCTCCCACAGTCCATGACGAATCAAATCTCCTAGCTCAAATGGGAGTTAATCTACGAGACCTTCCCAGACTATTCCCCTGCACTGGTGATCGACTTCTATAGAGCACGGTGGCAAGACAAAATAGATGAAGTCCTGGTGCGCGGCCATTCAATTGCATTTGCCCCCGCATTTATCAACTCCATATTTGAGCTTCAGGACCTGCCCGACGCAGAGGGTAATGCACTACTTTCTCTCAAGATCAGGACTTCCTAACAGCAGTTCTAGCTGCAGTGGCTCGCCCAGGTGCCAGCTGGGATGGGCGAGGAGCTTCAAGAACCCTTAAGACCCAGTCCCAAGTCTTCGAAGCATCCACGTGGATGCATTGGATAAAAAACCGCATCATGCCCACAACGCATGATGCCACCCTAAGTATACCGCGGGTGGTTTTGGTCTACTGCATCCTGTGGGGAATCCCGTTGGACCTAGGTCGCATATTACTGACTCCTTGTGCCAGAATGCATCCAAATCCAAGGGCGCCATATTCCTGCTGGGGCTGA ATGGTTGTGTTTGTTGGAGAGATCGTTGACGAACTGTTCGTTGAGGATCATAGTGCTGAGACGTTCTTGGGCTTCAACAAGATTCAATTCCTTCAAGAGGAAGCATGGAACTCCCTGTTGGGAGAGCTTGGCGTAGAAGGCGAAGCCTTGCGCCAGAAAGAAGCTGAAGCAAAGACTGCGGCAGATGAAGCTGCCAACAAAGCCGCAGAAGAAGTAGCTGCGAAAGAAAAAGAATGCGCTGAGGAGGAAGCACATATTAAGGCCGCGGAGGAGTTAGCCGCAGCAAGTCTAGCTGAAATCGCAGCGGCCCTAAATTCTCCGCCACGTGAGTCAACGTCGCCTGAGTCCGAAGATAACCTTCCGCTGACTCATCGCCGCAATTTGCAAGCAGCTGCGCTGGCTATTAGCGAGCCTTCAGAGAGCCATGCACTAGGCCCCCCCAAAAGAAAAAGGGCATCCACCGCATCCAAGGGCAAGACCTTCCCAGACTATTCCCCTGCACTGGTGATCGACTTCTATAGAGCACGGTGGCAAGACAAAATAGATGAAGTCCTGGACTTCCTAACAGCAGTTCTAGCTGCAGTGGCTCGCCCAGGTGCCAGCTGGGATGGGCGAGGAGCTTCAAGAACCCTTAAGACCCAGTCCCAAGTCTTCGAAGCATCCACGTGGATGCATTGGATAAAAAACCGCATCATGCCCACAACGCATGATGCCACCCTAAGTATACCGCGGGTGGTTTTGGTCTACTGCATCCTGTGGGGAATCCCGTTGGACCTAGGTCGCATATTACTGACTCCTTGTGCCAGAATGCATCCAAATCCAAGGGCGCCATATTCCTGCTGGGGCTGA ATGGTTGTGTTTGTTGGAGAGATCGTTGACGAACTGTTCGTTGAGGATCATAGTGCTGAGACGTTCTTGGGCTTCAACAAGATTCAATTCCTTCAAGAGGAAGCATGGAACTCCCTGTTGGGAGAGCTTGGCGTAGAAGGCGAAGCCTTGCGCCAGAAAGAAGCTGAAGCAAAGACTGCGGCAGATGAAGCTGCCAACAAAGCCGCAGAAGAAGTAGCTGCGAAAGAAAAAGAATGCGCTGAGGAGGAAGCACATATTAAGGCCGCGGAGGAGTTAGCCGCAGCAAGTCTAGCTGAAATCGCAGCGGCCCTAAATTCTCCGCCACGTGAGTCAACGTCGCCTGAGTCCGAAGATAACCTTCCGCTGACTCATCGCCGCAATTTGCAAGCAGCTGCGCTGGCTATTAGCGAGCCTTCAGAGAGCCATGCACTAGGCCCCCCCAAAAGAAAAAGGGCATCCACCGCATCCAAGGGCAAGACCTTCCCAGACTATTCCCCTGCACTGGTGATCGACTTCTATAGAGCACGGTGGCAAGACAAAATAGATGAAGTCCTGGACTTCCTAACAGCAGTTCTAGCTGCAGTGGCTCGCCCAGGTGCCAGCTGGGATGGGCGAGGAGCTTCAAGAACCCTTAAGACCCAGTCCCAAGTCTTCGAAGCATCCACGTGGATGCATTGGATAAAAAACCGCATCATGCCCACAACGCATGATGCCACCCTAAGTATACCGCGGGTGGTTTTGGTCTACTGCATCCTGTGGGGAATCCCGTTGGACCTAGGTCGCATATTACTGACTCCTTGTGCCAGAATGCATCCAAATCCAAGGGCGCCATATTCCTGCTGGGGCTGA MVVFVGEIVDELFVEDHSAETFLGFNKIQFLQEEAWNSLLGELGVEGEALRQKEAEAKTAADEAANKAAEEVAAKEKECAEEEAHIKAAEELAAASLAEIAAALNSPPRESTSPESEDNLPLTHRRNLQAAALAISEPSESHALGPPKRKRASTASKGKTFPDYSPALVIDFYRARWQDKIDEVLDFLTAVLAAVARPGASWDGRGASRTLKTQSQVFEASTWMHWIKNRIMPTTHDATLSIPRVVLVYCILWGIPLDLGRILLTPCARMHPNPRAPYSCWG Homology
BLAST of Spg004976 vs. NCBI nr
Match: XP_024995361.1 (formin-like protein 3 [Cynara cardunculus var. scolymus]) HSP 1 Score: 68.9 bits (167), Expect = 7.8e-08 Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 0
BLAST of Spg004976 vs. NCBI nr
Match: MCH80834.1 (hypothetical protein [Trifolium medium]) HSP 1 Score: 60.5 bits (145), Expect = 2.8e-05 Identity = 35/108 (32.41%), Postives = 59/108 (54.63%), Query Frame = 0
BLAST of Spg004976 vs. NCBI nr
Match: PON62892.1 (hypothetical protein PanWU01x14_135680 [Parasponia andersonii]) HSP 1 Score: 58.5 bits (140), Expect = 1.0e-04 Identity = 43/127 (33.86%), Postives = 63/127 (49.61%), Query Frame = 0
BLAST of Spg004976 vs. NCBI nr
Match: KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa]) HSP 1 Score: 58.2 bits (139), Expect = 1.4e-04 Identity = 30/76 (39.47%), Postives = 44/76 (57.89%), Query Frame = 0
BLAST of Spg004976 vs. NCBI nr
Match: XP_038904385.1 (uncharacterized protein LOC120090747 [Benincasa hispida]) HSP 1 Score: 57.4 bits (137), Expect = 2.3e-04 Identity = 35/108 (32.41%), Postives = 57/108 (52.78%), Query Frame = 0
BLAST of Spg004976 vs. ExPASy TrEMBL
Match: A0A392M2J7 (Uncharacterized protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0001608 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.3e-05 Identity = 35/108 (32.41%), Postives = 59/108 (54.63%), Query Frame = 0
BLAST of Spg004976 vs. ExPASy TrEMBL
Match: A0A2P5CPE8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 5.1e-05 Identity = 43/127 (33.86%), Postives = 63/127 (49.61%), Query Frame = 0
BLAST of Spg004976 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 6.6e-05 Identity = 30/76 (39.47%), Postives = 44/76 (57.89%), Query Frame = 0
BLAST of Spg004976 vs. ExPASy TrEMBL
Match: A0A6A2YYY2 (DNA-directed RNA polymerase V subunit 5C-like OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111128pilonHSYRG00157 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-04 Identity = 27/97 (27.84%), Postives = 57/97 (58.76%), Query Frame = 0
BLAST of Spg004976 vs. ExPASy TrEMBL
Match: A0A6A2ZUE4 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110733pilonHSYRG00282 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-04 Identity = 28/102 (27.45%), Postives = 56/102 (54.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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