Spg004912 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg004912
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold9: 20808186 .. 20810563 (+)
RNA-Seq Expression	Spg004912
Synteny	Spg004912

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGCCACTACCGTCCACCAAAACCAAAAACCCGCCACTCAACAGTTTAGAAAACACTTGTGGGAGTGGTTTTCAATGATCCAAGCGATGGGAGCTCAAAGACGTGCTATTCTTGAAGAGGAAGCAAATAGGCGAGATGAAAAAGATGCCGCCAAGGCAGTAGCAAGCTCTCGGTAAGAGGGAAATTCAACGGGTAAGAATTCTGAACCTTCAACTAACCCTTCTTCGTCTTGCAGGAACAAACCATTCGTTACCTACAGCGCAAGGAAGAGGAGTCCTAAGAAAAATGTGCCAGAGAAGCCGCTTGATATCTGGCCCCTGAAAACCGCAAGGATGCCACCAGACGTATTCGAAGGCATAATCCGCCAAGCCGTGGCAAAGGCTCTGGTTATTGCTGAAGGCTACAGGGCTAAACAGGAAACTTTGAAGGAGGTTGAGGCTAAAAGAGAAAGGGAAAATCAGCACATGATGGAGGAAGATGAGATTGCAAGAGAAAGAGATCTTGAGGAAGAAAAGAAAAGAGAAGAGGAAAGACAAGAGGCCGAGAGGGTCGAGTTAGTTGAAGAGGAAGAAAGAAAGTTAGGTGAAAGCCTCAGGAGGGCAGTGATTGACTTGCAGCTCCTTGAGGAAGAAAAACAAAGAAGAGAAGAATTGAAAGAAGATGAAAAAAGAAGGAAGGAAGCTGAAGACTTCCTTGCAGCTTTTGACCACTCCACAAGGCTCAAAGTGAGGCTGTAGTGCAGCAAGGAAGAGAGGAAGAGGCCCAACAGGGGCCAACTGAAGAAAACTTAGAAAAAGAAAAAGAAGGAGAGCAAGAGGATGAAGGCCAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGACGAGGCCACTGAAGCTCAACCTACTGACGAGGTTTTCGAACCTCTATTTAAGGATGATCCACCAGCAGCTGATAGCACCTCTTCGGGAGAGAAGATGGATGAAGAAGAGAAAGAAAGCAAGGAGGTTGAGACCTCCAATGACTCTGAAACAGAATCTAATTCAAAGATTAAGGAGCTGGATGACGACCAAGTTCCCATCTTTGCAGCATTGAGGAGGAAGAGAAAAAGAGAGATTAAAGCTGAATGGAGGACTAAGAACAAGAACGACCCCATATTTTCCAAGAGGCCGAGGACAAGGTCCATGGACGCCTCTTCAGTAGTTCCTCCTACCATCTCACCCGCCAAGCCAAAGGGCAAATCACCTAAGGCTACATCTCCTAAAAATCCATTCCCTGCGGTATTCAGAGATGTTAATTTTCAGGAACGGATGAAGATCATGAGAAAAAGAGATTTCCTCAATGAGAAGGGATTCTCTAACAGAGTAGGAGCACTGCCAGAGTTCGTAACCAGAGTTATCTTCTAGTATAAGTGGCAGGAGTTCTGTGCTCACCCGCAAGAGGCTGTAGTGCCTTTAGTTCGAGAGTTTTACGTCGGCCTGAGGGAGAAAAGCATTAGTATGGCGGTGGTGAGAGGCAAGTTGGTCAGCTTCTCTTCAGTAGACATTAACCGGGTGTACAAAATCAAGGCAGTACCCCTGAATCCAAAAGGGAATGATGTTATTAGGAACCCCTCGACCAAGCAGATGAAAGAAGCACTTAAACTTGTGGCCAACAAGGGAGTTTAATGGAAAGAGTCACAGACGAAGGTGAAGACTTTAGTGCCAAGTGACCTAAAGCCAAAATCGGCAGTTTGGCTTCACTTTCTAAAAAATCGTTTTATGCCAAGCACCCACGACAACACGATTTCAGTGGATAGAGTTATGTTACTCTATTGCATCATGAAGGGGTTGGAGATCAATATTGGGAGCATTATCAGGGATGGAATTTTAGCCTGTGGAAGGAAACGAGCAGGTAAACTTTTCTTTGGATCACTCATCACCTAGCTTTGTCAGAGGGTGAAGATAGTTCCGGGCAAGGACGAGGAGCGTCATTTCTTCAAGCCGACCATTGACCTGTCCTTGGTCGGGAAGCTTCAACAGAACAACATCCAGAGGAAAGATAAAGCCTTCACATCTCAGACCACTCCACCATCAGGGCCGAGCATGGCCTCTCCATCCCAGCACACTCCTTTTACAGGGCCTTCACCGTCATCGGAAGCCCTAGCCATTGCCTACCGCCAGCTTGATCAAATCAGGGAAAACCTGAAGACATATTGGGCATATGCAAAGGAGAGGGATGAGGCCATTAGAGAGTTCTATCTCTCTATCGCCCCGAGTATTGCTCCAGTTTTTCCCGATTTTCCTCAATCGCTGCTGCCTCAAGAAGACAAGGATTCTGATGAAGAGGAAGATGAGAATGATGATGAAGATGATGAAGAGAAAGAGAGTTCCTCGGACGAGGACTAG

mRNA sequence

ATGTGTGCCACTACCGTCCACCAAAACCAAAAACCCGCCACTCAACAGTTTAGAAAACACTTGTGGGAGTGGTTTTCAATGATCCAAGCGATGGGAGCTCAAAGACGTGCTATTCTTGAAGAGGAAGCAAATAGGCGAGATGAAAAAGATGCCGCCAAGGCAGTAGCAAGCTCTCGGAACAAACCATTCGTTACCTACAGCGCAAGGAAGAGGAGTCCTAAGAAAAATGTGCCAGAGAAGCCGCTTGATATCTGGCCCCTGAAAACCGCAAGGATGCCACCAGACGTATTCGAAGGCATAATCCGCCAAGCCGTGGCAAAGGCTCTGGTTATTGCTGAAGGCTACAGGGCTAAACAGGAAACTTTGAAGGAGGTTGAGGCTAAAAGAGAAAGGGAAAATCAGCACATGATGGAGGAAGATGAGATTGCAAGAGAAAGAGATCTTGAGGAAGAAAAGAAAAGAGAAGAGGAAAGACAAGAGGCCGAGAGGGTCGAGTTAGTTGAAGAGGAAGAAAGAAATGAGGCTGTAGTGCAGCAAGGAAGAGAGGAAGAGGCCCAACAGGGGCCAACTGAAGAAAACTTAGAAAAAGAAAAAGAAGGAGAGCAAGAGGATGAAGGCCAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGACGAGGCCACTGAAGCTCAACCTACTGACGAGGTTTTCGAACCTCTATTTAAGGATGATCCACCAGCAGCTGATAGCACCTCTTCGGGAGAGAAGATGGATGAAGAAGAGAAAGAAAGCAAGGAGGTTGAGACCTCCAATGACTCTGAAACAGAATCTAATTCAAAGATTAAGGAGCTGGATGACGACCAAGTTCCCATCTTTGCAGCATTGAGGAGGAAGAGAAAAAGAGAGATTAAAGCTGAATGGAGGACTAAGAACAAGAACGACCCCATATTTTCCAAGAGGCCGAGGACAAGGTCCATGGACGCCTCTTCAGTAGTTCCTCCTACCATCTCACCCGCCAAGCCAAAGGGCAAATCACCTAAGGCTACATCTCCTAAAAATCCATTCCCTGCGGTATTCAGAGATGTTAATTTTCAGGAACGGATGAAGATCATGAGAAAAAGAGATTTCCTCAATGAGAAGGGATTCTCTAACAGAGAGTTCTGTGCTCACCCGCAAGAGGCTGTAGTGCCTTTAGTTCGAGAGTTTTACGTCGGCCTGAGGGAGAAAAGCATTAGTATGGCGGTGGTGAGAGGCAAGTTGGTCAGCTTCTCTTCAGTAGACATTAACCGGGTGTACAAAATCAAGGCAGTACCCCTGAATCCAAAAGGGAATGATGTTATTAGGAACCCCTCGACCAAGCAGATGAAAGAAGCACTTAAACTTGTGGCCAACAAGGGAAGGGTGAAGATAGTTCCGGGCAAGGACGAGGAGCGTCATTTCTTCAAGCCGACCATTGACCTGTCCTTGGTCGGGAAGCTTCAACAGAACAACATCCAGAGGAAAGATAAAGCCTTCACATCTCAGACCACTCCACCATCAGGGCCGAGCATGGCCTCTCCATCCCAGCACACTCCTTTTACAGGGCCTTCACCGTCATCGGAAGCCCTAGCCATTGCCTACCGCCAGCTTGATCAAATCAGGGAAAACCTGAAGACATATTGGGCATATGCAAAGGAGAGGGATGAGGCCATTAGAGAGTTCTATCTCTCTATCGCCCCGAGTATTGCTCCAGTTTTTCCCGATTTTCCTCAATCGCTGCTGCCTCAAGAAGACAAGGATTCTGATGAAGAGGAAGATGAGAATGATGATGAAGATGATGAAGAGAAAGAGAGTTCCTCGGACGAGGACTAG

Coding sequence (CDS)

ATGTGTGCCACTACCGTCCACCAAAACCAAAAACCCGCCACTCAACAGTTTAGAAAACACTTGTGGGAGTGGTTTTCAATGATCCAAGCGATGGGAGCTCAAAGACGTGCTATTCTTGAAGAGGAAGCAAATAGGCGAGATGAAAAAGATGCCGCCAAGGCAGTAGCAAGCTCTCGGAACAAACCATTCGTTACCTACAGCGCAAGGAAGAGGAGTCCTAAGAAAAATGTGCCAGAGAAGCCGCTTGATATCTGGCCCCTGAAAACCGCAAGGATGCCACCAGACGTATTCGAAGGCATAATCCGCCAAGCCGTGGCAAAGGCTCTGGTTATTGCTGAAGGCTACAGGGCTAAACAGGAAACTTTGAAGGAGGTTGAGGCTAAAAGAGAAAGGGAAAATCAGCACATGATGGAGGAAGATGAGATTGCAAGAGAAAGAGATCTTGAGGAAGAAAAGAAAAGAGAAGAGGAAAGACAAGAGGCCGAGAGGGTCGAGTTAGTTGAAGAGGAAGAAAGAAATGAGGCTGTAGTGCAGCAAGGAAGAGAGGAAGAGGCCCAACAGGGGCCAACTGAAGAAAACTTAGAAAAAGAAAAAGAAGGAGAGCAAGAGGATGAAGGCCAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGACGAGGCCACTGAAGCTCAACCTACTGACGAGGTTTTCGAACCTCTATTTAAGGATGATCCACCAGCAGCTGATAGCACCTCTTCGGGAGAGAAGATGGATGAAGAAGAGAAAGAAAGCAAGGAGGTTGAGACCTCCAATGACTCTGAAACAGAATCTAATTCAAAGATTAAGGAGCTGGATGACGACCAAGTTCCCATCTTTGCAGCATTGAGGAGGAAGAGAAAAAGAGAGATTAAAGCTGAATGGAGGACTAAGAACAAGAACGACCCCATATTTTCCAAGAGGCCGAGGACAAGGTCCATGGACGCCTCTTCAGTAGTTCCTCCTACCATCTCACCCGCCAAGCCAAAGGGCAAATCACCTAAGGCTACATCTCCTAAAAATCCATTCCCTGCGGTATTCAGAGATGTTAATTTTCAGGAACGGATGAAGATCATGAGAAAAAGAGATTTCCTCAATGAGAAGGGATTCTCTAACAGAGAGTTCTGTGCTCACCCGCAAGAGGCTGTAGTGCCTTTAGTTCGAGAGTTTTACGTCGGCCTGAGGGAGAAAAGCATTAGTATGGCGGTGGTGAGAGGCAAGTTGGTCAGCTTCTCTTCAGTAGACATTAACCGGGTGTACAAAATCAAGGCAGTACCCCTGAATCCAAAAGGGAATGATGTTATTAGGAACCCCTCGACCAAGCAGATGAAAGAAGCACTTAAACTTGTGGCCAACAAGGGAAGGGTGAAGATAGTTCCGGGCAAGGACGAGGAGCGTCATTTCTTCAAGCCGACCATTGACCTGTCCTTGGTCGGGAAGCTTCAACAGAACAACATCCAGAGGAAAGATAAAGCCTTCACATCTCAGACCACTCCACCATCAGGGCCGAGCATGGCCTCTCCATCCCAGCACACTCCTTTTACAGGGCCTTCACCGTCATCGGAAGCCCTAGCCATTGCCTACCGCCAGCTTGATCAAATCAGGGAAAACCTGAAGACATATTGGGCATATGCAAAGGAGAGGGATGAGGCCATTAGAGAGTTCTATCTCTCTATCGCCCCGAGTATTGCTCCAGTTTTTCCCGATTTTCCTCAATCGCTGCTGCCTCAAGAAGACAAGGATTCTGATGAAGAGGAAGATGAGAATGATGATGAAGATGATGAAGAGAAAGAGAGTTCCTCGGACGAGGACTAG

Protein sequence

MCATTVHQNQKPATQQFRKHLWEWFSMIQAMGAQRRAILEEEANRRDEKDAAKAVASSRNKPFVTYSARKRSPKKNVPEKPLDIWPLKTARMPPDVFEGIIRQAVAKALVIAEGYRAKQETLKEVEAKRERENQHMMEEDEIARERDLEEEKKREEERQEAERVELVEEEERNEAVVQQGREEEAQQGPTEENLEKEKEGEQEDEGQNATASGPHSEEGLDEATEAQPTDEVFEPLFKDDPPAADSTSSGEKMDEEEKESKEVETSNDSETESNSKIKELDDDQVPIFAALRRKRKREIKAEWRTKNKNDPIFSKRPRTRSMDASSVVPPTISPAKPKGKSPKATSPKNPFPAVFRDVNFQERMKIMRKRDFLNEKGFSNREFCAHPQEAVVPLVREFYVGLREKSISMAVVRGKLVSFSSVDINRVYKIKAVPLNPKGNDVIRNPSTKQMKEALKLVANKGRVKIVPGKDEERHFFKPTIDLSLVGKLQQNNIQRKDKAFTSQTTPPSGPSMASPSQHTPFTGPSPSSEALAIAYRQLDQIRENLKTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEDKDSDEEEDENDDEDDEEKESSSDED

Homology

The following BLAST results are available for this feature:

BLAST of Spg004912 vs.


Match Name	E-value	Identity	Description

BLAST of Spg004912 vs.


Match Name	E-value	Identity	Description

BLAST of Spg004912 vs.


Match Name	E-value	Identity	Description

BLAST of Spg004912 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 115..135
None	No IPR available	COILS	Coil	Coil	coord: 138..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 575..612
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 587..612
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..352
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 499..527
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 499..528

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg004912.1	Spg004912.1	mRNA