Spg004891 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAGATTCTAAAATTTTTTCTTGCAGAAAAAAGGAAATAAAGATGGAGGATTCAACTAAAAGAACCAAGGAGGTTCTTGAAGAAAACGATGATGTTGCTCATCGTCCTTTCTTTTTAACCATCTTCAACTCGCTGTTGAAACTTGTCATGGCCATTTTCAGGCTTCTAGGTCCCTATGCTCATCGTCCGACACCGTCGCCACCGGAAGGTTGCGGCTCATATCCGCCTCCCACAGCGGCTGACCCACCTGTTGATGAATTGGTAAGCCTTGATTTCCCAACACTTGTAGAGGCTAGAAATTTTTCGACAAATTTTGGGTTCGTTTGAAATACATTTTAATTTAAATATTTTTCAAGAATGTATTTTTTTAAAAAAGTTTTGTACAAAAATGTTTAAAATTTAAATACTCAGTATGTTTGGTTGCATTTCCTCATAGGTGTTTTTATACACAAGTTATTGTATACTAAAGACTCTTTTTAAAAAAAACTGGCTTCGAGTGTTTCTCTCAAAATAGTTTATTTATTAATCTCATTTTCTAATAAGTCATTTTTAGTGGTTGTCAAACACTATAATTTTTTTTCAAAATTAAACACTTGAAAAGTTAAACCAAACACACCCTTTATATTTTTTCCATTCTAAAAACTTTATGAGACAAATTAGGAAACAAGATGTCAAGGGAAATTATAATGGTAGCATGATTTATATCAAATATTGCAATATATCACCTAGAAAGATATGCAAACATAACAAAGTGGAAGAGTCCGTTTGGAATACATTTTAATTTAAATGTTTTTCAAGAATGCATTTTTTAAAAAACATTTTGCATAAAACTGTTTAAAATTTAAACACTCATATGTTTGGTTACATTTCCTCATAAATGTTTTTAGACACAAGTTATTGCATATTTAAAACTCTTTTTGAAAAAGTTGGTTACAAGTGTTTCTTTCAAAATGATTTATTTCTCAATCTCATTTTCTAATAAGTCATTTTTAGTGGTTGCCAAACATTAGAAATTTTTTCAAAATGATTTTTTTTCAAAATTAAACACTTGAAAAGTTAAACCAAACACACCCGAAATCTCATTCATTCAATCCATATATAGATTAAGTAGTGATTTTTCAAGATAACAATTAATTAATATATAGGCCAATTAGTGATCAATGATATTCTAAAATTATCATTGATTAGTATATAAGTTAGGCCGGTTTGGAGTACCTTTTCGTTTAAGTGTTTTTCAAGAATGTTTTTTTTAAACAATTTGTACAAAAATTTTTTAGAATTTAAACACTCATATATTTGGTTACATTTCCTTATATGTGTTTGTATGCACAAGTTATTATATATTTAAAAACTCTTTTTTTTTTTTAAACTTTCTTTCAATTATTTATTTCAAAATGGTTTATTTCTCAATCTTATTTTTTACTAAGTTATTTTTAGTGGTGGTTAAACACTAGAATTTTTTCAAAATTAAACCCTTGAAAAATTAAATCAAACACACCCTTAATCGATGTTATACTAAGGTAACATTAAGGTAATATCGAGGATTAATCACTAATTACAACAATTTAAGAGAATATGAATTTCTGAAAGGATAACTTATATGGAATTATTTTTAGGAAATAACACATTAGTAAATACTCTTTTAAAAAGTGCTAAAAATTTTCAAAATTTCAAAATTTTAAGTATTATATACTTTCTGAATTTTACTTACAAGAGGCAGAGCCAAAAGCCTTTATTGGAAGGAACAAAATTCTATATTCTAAATATATATATACACAACATACATACAAATAAATATGAGGGAGGAGGGCAAATTCGAGAGGACTTTAAAATCTATAGCTTTTTGAAAAAATTTTAACATATGACGGGCTCTTTTCTCTTCGCTTTTGGGCAATTGCACTATTCTTTGTTCTTGACTCTGTCCATATCTGACTCTTCTTTCATGTAGTCATAGGTTGAGCAGAGGAAGTTACAATTTAGGTCAAATTATATATTATTATTAAAACGTTGTGTTAAAGGTTGTTTGGATCTGTTTGGTTTTGTAGGGACAGGAAAAAGGTAGACTTAATCCACCTCCGCCGCCGCCTCCAAGCAACGGCGGCGGTCCTCAGACCAACCTATCTCCGTCAGACCCCCAAGATGAACAATGAAATATATATACATATATGTGGAGATGCATAACATAGAAAAGTTCCATCTAAAGTCACTTATTAAGTTGGTTGATTGTTGTAAAATAATTTTCTTCTATGAAAAATTAGCAAACCATTATTTAATTTCTCTCTAGAGTAATTCTCTTTGGAGTGGAGCTTTATGGAAATCAAAATTATAGAAGCTTGATTTGTCTTGTTGTCGC GCAGATTCTAAAATTTTTTCTTGCAGAAAAAAGGAAATAAAGATGGAGGATTCAACTAAAAGAACCAAGGAGGTTCTTGAAGAAAACGATGATGTTGCTCATCGTCCTTTCTTTTTAACCATCTTCAACTCGCTGTTGAAACTTGTCATGGCCATTTTCAGGCTTCTAGGTCCCTATGCTCATCGTCCGACACCGTCGCCACCGGAAGGTTGCGGCTCATATCCGCCTCCCACAGCGGCTGACCCACCTGTTGATGAATTGGGACAGGAAAAAGGTAGACTTAATCCACCTCCGCCGCCGCCTCCAAGCAACGGCGGCGGTCCTCAGACCAACCTATCTCCGTCAGACCCCCAAGATGAACAATGA GCAGATTCTAAAATTTTTTCTTGCAGAAAAAAGGAAATAAAGATGGAGGATTCAACTAAAAGAACCAAGGAGGTTCTTGAAGAAAACGATGATGTTGCTCATCGTCCTTTCTTTTTAACCATCTTCAACTCGCTGTTGAAACTTGTCATGGCCATTTTCAGGCTTCTAGGTCCCTATGCTCATCGTCCGACACCGTCGCCACCGGAAGGTTGCGGCTCATATCCGCCTCCCACAGCGGCTGACCCACCTGTTGATGAATTGGGACAGGAAAAAGGTAGACTTAATCCACCTCCGCCGCCGCCTCCAAGCAACGGCGGCGGTCCTCAGACCAACCTATCTCCGTCAGACCCCCAAGATGAACAATGA ADSKIFSCRKKEIKMEDSTKRTKEVLEENDDVAHRPFFLTIFNSLLKLVMAIFRLLGPYAHRPTPSPPEGCGSYPPPTAADPPVDELGQEKGRLNPPPPPPPSNGGGPQTNLSPSDPQDEQ Homology
BLAST of Spg004891 vs. NCBI nr
Match: XP_008464347.1 (PREDICTED: uncharacterized protein LOC103502255 [Cucumis melo] >KAA0039202.1 uncharacterized protein E6C27_scaffold121G001200 [Cucumis melo var. makuwa] >TYK18469.1 uncharacterized protein E5676_scaffold607G00390 [Cucumis melo var. makuwa]) HSP 1 Score: 85.9 bits (211), Expect = 2.6e-13 Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 0
BLAST of Spg004891 vs. NCBI nr
Match: XP_031743811.1 (uncharacterized protein LOC116404676 [Cucumis sativus] >KAE8646593.1 hypothetical protein Csa_005180 [Cucumis sativus]) HSP 1 Score: 75.9 bits (185), Expect = 2.7e-10 Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = 0
BLAST of Spg004891 vs. NCBI nr
Match: XP_038886557.1 (uncharacterized protein LOC120076731 [Benincasa hispida]) HSP 1 Score: 65.1 bits (157), Expect = 4.8e-07 Identity = 48/109 (44.04%), Postives = 65/109 (59.63%), Query Frame = 0
BLAST of Spg004891 vs. NCBI nr
Match: KAG6592220.1 (hypothetical protein SDJN03_14566, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 60.1 bits (144), Expect = 1.5e-05 Identity = 40/80 (50.00%), Postives = 49/80 (61.25%), Query Frame = 0
BLAST of Spg004891 vs. NCBI nr
Match: XP_008464348.1 (PREDICTED: uncharacterized protein LOC103502256 [Cucumis melo]) HSP 1 Score: 59.3 bits (142), Expect = 2.6e-05 Identity = 47/110 (42.73%), Postives = 60/110 (54.55%), Query Frame = 0
BLAST of Spg004891 vs. ExPASy TrEMBL
Match: A0A5A7T6U0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00390 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.3e-13 Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 0
BLAST of Spg004891 vs. ExPASy TrEMBL
Match: A0A1S3CMT1 (uncharacterized protein LOC103502255 OS=Cucumis melo OX=3656 GN=LOC103502255 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.3e-13 Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 0
BLAST of Spg004891 vs. ExPASy TrEMBL
Match: A0A0A0K8Z6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020170 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 2.1e-08 Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 0
BLAST of Spg004891 vs. ExPASy TrEMBL
Match: A0A1S3CLD8 (uncharacterized protein LOC103502256 OS=Cucumis melo OX=3656 GN=LOC103502256 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.3e-05 Identity = 47/110 (42.73%), Postives = 60/110 (54.55%), Query Frame = 0
BLAST of Spg004891 vs. ExPASy TrEMBL
Match: A0A5D3D4J4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00380 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 4.9e-05 Identity = 46/109 (42.20%), Postives = 59/109 (54.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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