Spg004874 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg004874
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold9: 22727901 .. 22731648 (+)
RNA-Seq ExpressionSpg004874
SyntenySpg004874
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACCAACTAGGGTAGTCATCCGAGAGCCCTCAGAAAGACCTGCGGCAGGCCCGAGCAAAAAGAGGAAAGGGGCCCCCGCCGCATCTAAAGGCAAAGAAAAAGTAGGCGAAGACAAGGGCAACTTCCAAGAAGAGAGGGGGTTTAGCTGCACGCTCCCGCAGACCATGACAGACCAAATTTCCCAACACAAACGTGAAACAATCTGCGAGAACTTCCCCAACTACGCTCCTGCGTTAGTCCACGATTTCCACCGAGCGTAGTGGCAGGAAGAAATCAACGAAGTATTGGTGCGTGGCCACCCTCGCATTCGCCTTTGCATGCATCAACTCAATATTCGAGCTTCCGGACATACCTGACGCAGAACGAAATGCACTGCTGAACTGCCTGGATGACGACTTTCTGAACGCATAACTACTTGCGGTGGCCAGACCAGGTGCTAAGTGGGACGGCCACGGTGCTGCGAGGACCCTGAAGTCACAGTTGTTGGACTTCGAGGACACAGCTTGGATGCACTGGATCAAGAACCGCATCATGCCCACAACGCATGATGCCACGTTGAGCATCCCAAGGGTGGTTCTCGTCTACTGCAATATGAAGGGAATCCCACTCGACTTGGGCAGAATCCTTGTCGAAACCCTGCGCCAGACTGTCGCAAAACCCAAATGCGCAATGTTCTGCCCTGGCCTCGTCACCCGCCTATGTCGCGCATCAGGCCTTCTGCCCGCAGCAGACGAAGAAATCCGACCCATGCGGAAGGATTTTGATAAACAATGGTGGACGCGCATAACGCGCACCCACAGCCTGCGACAGCAAGGAGGAACCCAGCGCCAAGACACTGCATCCCAAACAACAGAAGTTGCGCCTGCGCCTGAGATTGGTGTTCAAGTAACAAATTATACACTTGTAGATAGTGAATAATTAACGAATTATACACTGCAACAGAAGCTGCGTCTGCGCCTTAGATTGGTGGTGTTGGGTTTTATGTCCTAAAACTCATAGATAGTGAATGATTAACGAATTATACACTTGTATCAATAAAGTGTTATTAAGGTTTATGCAATAAAGTGTTATTGTCACATTAAGTCTAGAATTGCACAATATGACCCAAATCCAATAAACTAAGATCCAAGGTTGTTTACATGCAACTTGAACTAGTATGTGGGGACATACGGGGAATGGTGTTCAAGTAACAACCTAAAAGGTCTATAGTACGGGGATAAGGCTAGGTACCTTATCTTGGTAACACTATGTGATACGACCCGCTTTGTATTCGATACAGACATATTGATCCAAGGCGTCCATATAGGAGACATGCGAGCGGGGGTATCCGATGCAATGAGTTTGCATAAGACCGGACCACGAAATAGTAAACCACTAGATGTAACACTGTTAACTAGTTAGGTTACTGTTTCAATAGGATGACCTAAGTAACTCAGTCTTAATCCTGAGTGTGTCATGAACTCCTTCTCACGAGGGATTGTCCTTTGATTAGTACGGGTGAGAGTGGCCTACTCGCCGACTCAATAAGCCTACCTTCTTGGGGACAAGATCGAGTGGGGGGCTGGGGACATGACAATACAAGATGGAATTCACTCCTTCCCCTATTGGGGCAAGTAGATGTGTGTTCCCTTAAGGGCTGATTCCAGGGCTTGAACAAAGGTGCGCCGTCCTCTCCTGGCCCGAGAGGAACTCCTGTTTTGTGGTTGGACCCTAAACAACTTGTTCATTAGAGGGATCAGTGGTACTTAAGGAACCAGAGGTAACCCAGGGGTAAAACGGTAATTTGACCCAGCTGGTGTTACGAACACACGTGAAGGATTGACTTACTGCATTGGTCGATATCTGTGGACACAGAAATATTCTACAGTGAGAAGAGTGCAGTTGTGGGTCTTTAGTGGAGTGACCCACAGTTAACGAATGTTGATTGACTCGGTTAATGAGTTTAGTTGATCAATCTCGTATCGTTGGAGCTTCTGATCTGTAGGTCCATTAAGTCCACCTACTAGCTCATAACGGGTTCTGAGATAATATAGTCTTGATTATTAAAGGGAATTTAAGTTAATTGTATTTTGATGCAATTAATATAATGTATGGAGATACATTATAGTATAAGTTTAATTAATGAATTAAACTTTATAATAAAATTAATTTTGGATATGATTCAAAATTAATTAATGAGAGACTTATGAATTTAATTAAATATGTGATATTTGATTAATTCATGAATTAATTAATTGGGAATTAATTAATTTAATTTGGTTAAATATGATTTAATCAAATTAATACTATAGTTTATGTTAATGTACATTTTGATGCACATTAAAACTATAGGTTAAATGAGAGAGATTAAATTGAATATGATTCAATTATAAAATTAATTAAATATCTGATATTTAATTAGTGTAGGATTCAATTAATTGAGAATTAATTGAATGGCCAATTTAATTCAATTAAATATGATTTAAATTGAATTAAAAACCTTATGTTATAATTGATTTAATTAATATTGATTTATTAAATTAATTATAATTAAAAAATTAGTTAAATGATTATTATTATTTAATTAATAGAAAGTCCAGATCATTTGGATTAGATCCAATGGTTGAGATCAAGTAGGGTAATAACTCCCTCCCCACTTATCGTGAAGTGGAGAGGGGTTACCCAACTGGCCTCCCATTCTCTCATTCTCACGCAAAAACAGAGAGGGAGATCTCTTAGATTTTCTCTCTAGTCTTCTCTCAGAAATTCAGCAACTTGCTTTGCTGAAAAAATTCCCTTTCCAATGCGAAAATTGATCCCACAATCGAGTTCTCAAGATAACCCAAGAGGATAGCGGGTGAATTCGTGTGGTGGTGTCCATTGGAAGATCAAGAACATTATTTGGGAGCATAGTACAGTTTTGATCGTCAAAACATGTAAGTTTTTTGTTTCTAAACTAGTTTAGATTGCATGCTTAATCATAGGAATTGTTTCTCAATTATTGCCAACGTATTGGTTTTTCTAAAATTGAAATTAAATACGAGATCGTTCTTGATTGTTTCCACTGCCAAAAGGGATTTCAACCCTTGAATTGGTATCAGAGCCATCTCATTAATTGATTTCAATTACTAAAAATTGCGTTGGTTTTGGTGGGATTATGCATTATGAATGTGGTTTGCTGAAAAATTGTTTTGGTATATTTGGACATAGATTTACTGTGTTTTGATTTGATCAAAATTGTTAGGCCCCTGCGGTTTTTGGGCATTTACTCAGTAAATCGAGTCTTGTAAAGTTCGTTTCTAGATTAGGATTCATTTTGATGAAGATCAGGATGAATTTGGGCAAAAAATCGATTGGAATCGGCGCTGGAACGAAGGTCAGTACGCTGTCCAGAGGCGTAGCGTCGCGACCCTGCTCAACGGAGTCGCGACGCTGAAGATCAGGCGCTGGGAAAAATCGGGCCAGCGTCGGGACGCTTTGCCTACAGCGTCTCGACGCTGACGGGAATTTTCGGATTTGCAGAGCGTTGAACGCGTCGTGCGGAACGTGAATTCTGGTGGTTATTTGAGCAGTTACAAAGAAATTATTTTTGCATTCAATAATGTTCGAATCGAGCAGTTGGCGTGCGCTAATGGGTACCACGCTAGAGGTCGTGTGTTCGAGCTTCATCGTGGGCAAATATTTTTTTCCGTGCGGATTAGTTCGAGGGCGGTCTGGTTTGCAGCTGGCTTGGTCCGGTTCGGTTCAATCTGGTCTGGTTCATGA

mRNA sequence

ATGCAACCAACTAGGGTAGTCATCCGAGAGCCCTCAGAAAGACCTGCGGCAGGCCCGAGCAAAAAGAGGAAAGGGGCCCCCGCCGCATCTAAAGGCAAAGAAAAAGTAGGCGAAGACAAGGGCAACTTCCAAGAAGAGAGGGGGTTTAGCTGCACGCTCCCGCAGACCATGACAGACCAAATTTCCCAACACAAACGTGCTAAGTGGGACGGCCACGGTGCTGCGAGGACCCTGAAGTCACAGTTGTTGGACTTCGAGGACACAGCTTGGATGCACTGGATCAAGAACCGCATCATGCCCACAACGCATGATGCCACGTTGAGCATCCCAAGGGTGGTTCTCGTCTACTGCAATATGAAGGGAATCCCACTCGACTTGGGCAGAATCCTTGTCGAAACCCTGCGCCAGACTGTCGCAAAACCCAAATGCGCAATGTTCTGCCCTGGCCTCGTCACCCGCCTATGTCGCGCATCAGGCCTTCTGCCCGCAGCAGACGAAGAAATCCGACCCATGCGGAAGGATTTTGATAAACAATGGTGGACGCGCATAACGCGCACCCACAGCCTGCGACAGCAAGGAGGAACCCAGCGCCAAGACACTGCATCCCAAACAACAGAAGTTGCGCCTGCGCCTGAGATTGGTGTTCAAGCCCCTGCGGTTTTTGGGCATTTACTCAGTAAATCGAGTCTTGTAAAGTTCGTTTCTAGATTAGGATTCATTTTGATGAAGATCAGGATGAATTTGGGCAAAAAATCGATTGGAATCGGCGCTGGAACGAAGAGCGTTGAACGCGTCGTGCGGAACGTGAATTCTGGTGGTTATTTGAGCAGTTACAAAGAAATTATTTTTGCATTCAATAATGTTCGAATCGAGCAGTTGGCGTGCGCTAATGGGTACCACGCTAGAGGTCGTGTGTTCGAGCTTCATCGTGGGCAAATATTTTTTTCCGTGCGGATTAGTTCGAGGGCGGTCTGGTTTGCAGCTGGCTTGGTCCGGTTCGGTTCAATCTGGTCTGGTTCATGA

Coding sequence (CDS)

ATGCAACCAACTAGGGTAGTCATCCGAGAGCCCTCAGAAAGACCTGCGGCAGGCCCGAGCAAAAAGAGGAAAGGGGCCCCCGCCGCATCTAAAGGCAAAGAAAAAGTAGGCGAAGACAAGGGCAACTTCCAAGAAGAGAGGGGGTTTAGCTGCACGCTCCCGCAGACCATGACAGACCAAATTTCCCAACACAAACGTGCTAAGTGGGACGGCCACGGTGCTGCGAGGACCCTGAAGTCACAGTTGTTGGACTTCGAGGACACAGCTTGGATGCACTGGATCAAGAACCGCATCATGCCCACAACGCATGATGCCACGTTGAGCATCCCAAGGGTGGTTCTCGTCTACTGCAATATGAAGGGAATCCCACTCGACTTGGGCAGAATCCTTGTCGAAACCCTGCGCCAGACTGTCGCAAAACCCAAATGCGCAATGTTCTGCCCTGGCCTCGTCACCCGCCTATGTCGCGCATCAGGCCTTCTGCCCGCAGCAGACGAAGAAATCCGACCCATGCGGAAGGATTTTGATAAACAATGGTGGACGCGCATAACGCGCACCCACAGCCTGCGACAGCAAGGAGGAACCCAGCGCCAAGACACTGCATCCCAAACAACAGAAGTTGCGCCTGCGCCTGAGATTGGTGTTCAAGCCCCTGCGGTTTTTGGGCATTTACTCAGTAAATCGAGTCTTGTAAAGTTCGTTTCTAGATTAGGATTCATTTTGATGAAGATCAGGATGAATTTGGGCAAAAAATCGATTGGAATCGGCGCTGGAACGAAGAGCGTTGAACGCGTCGTGCGGAACGTGAATTCTGGTGGTTATTTGAGCAGTTACAAAGAAATTATTTTTGCATTCAATAATGTTCGAATCGAGCAGTTGGCGTGCGCTAATGGGTACCACGCTAGAGGTCGTGTGTTCGAGCTTCATCGTGGGCAAATATTTTTTTCCGTGCGGATTAGTTCGAGGGCGGTCTGGTTTGCAGCTGGCTTGGTCCGGTTCGGTTCAATCTGGTCTGGTTCATGA

Protein sequence

MQPTRVVIREPSERPAAGPSKKRKGAPAASKGKEKVGEDKGNFQEERGFSCTLPQTMTDQISQHKRAKWDGHGAARTLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADEEIRPMRKDFDKQWWTRITRTHSLRQQGGTQRQDTASQTTEVAPAPEIGVQAPAVFGHLLSKSSLVKFVSRLGFILMKIRMNLGKKSIGIGAGTKSVERVVRNVNSGGYLSSYKEIIFAFNNVRIEQLACANGYHARGRVFELHRGQIFFSVRISSRAVWFAAGLVRFGSIWSGS
Homology
[Close]
BLAST of Spg004874 vs. NCBI nr
Match: KAE8676815.1 (hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus])

HSP 1 Score: 76.3 bits (186), Expect = 5.9e-10
Identity = 34/104 (32.69%), Postives = 64/104 (61.54%), Query Frame = 0 

Query: 68   KWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDL 127
            +W+G   +R ++  + L      W H++K+++MPT+H+ T+S+ R++L++  M   P+D+
Sbjct: 984  EWNGRQTSRYSVNRENLQLRAKLWNHFLKHKLMPTSHNTTVSLSRLLLLHSIMVSHPIDV 1043

Query: 128  GRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADEEIRP 171
            GRI+V+ +   ++K   A+  P L+T LCR   +   A +EI P
Sbjct: 1044 GRIIVQQVHDCLSKKASALVFPNLITTLCRKKKVEENAFDEILP 1087

[Close]
BLAST of Spg004874 vs. NCBI nr
Match: KAE8661093.1 (hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus])

HSP 1 Score: 73.9 bits (180), Expect = 2.9e-09
Identity = 34/107 (31.78%), Postives = 63/107 (58.88%), Query Frame = 0 

Query: 65  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIP 124
           +  +W+G   +R ++  + L      W H++KN++MPT+H+ T+S+ R++L++  M   P
Sbjct: 142 ENTEWNGRQTSRYSVNRERLQPRAKLWNHFLKNKLMPTSHNTTVSLSRLLLLHSIMVSRP 201

Query: 125 LDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADEEIRP 171
           +D+G I+V+ +   + K   A+  P L+T LCR   +   A +EI P
Sbjct: 202 IDVGCIIVQQVHDCLGKKASALVFPNLITTLCRKKKVEENAFDEILP 248

[Close]
BLAST of Spg004874 vs. NCBI nr
Match: KAE8718449.1 (hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus])

HSP 1 Score: 73.9 bits (180), Expect = 2.9e-09
Identity = 33/107 (30.84%), Postives = 64/107 (59.81%), Query Frame = 0 

Query: 65  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIP 124
           +  +W+G   +R ++  + L      W H++K+++MPT+H+ T+S+ R++L++  +   P
Sbjct: 142 ENTEWNGRQTSRYSVNRERLQPRAKLWNHFLKHKLMPTSHNTTVSLSRLLLLHSMIVSRP 201

Query: 125 LDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADEEIRP 171
           +D+GRI+V+ +   + K   A+  P L+T LCR   +   A +EI P
Sbjct: 202 IDVGRIIVQQVHDCLGKKASALVFPNLITALCRKKKVEENAFDEILP 248

[Close]
BLAST of Spg004874 vs. NCBI nr
Match: KAE8680640.1 (hypothetical protein F3Y22_tig00111372pilonHSYRG00020 [Hibiscus syriacus])

HSP 1 Score: 73.6 bits (179), Expect = 3.8e-09
Identity = 39/138 (28.26%), Postives = 78/138 (56.52%), Query Frame = 0 

Query: 34  EKVGEDKGNFQEERGFSCTLPQTMTDQISQHKRAKWDGHGAAR-TLKSQLLDFEDTAWMH 93
           + V ++   F+EE   S T  + + D   ++   +W+G   +R ++  + L      W H
Sbjct: 114 QDVVDNHAKFEEEAD-SNTYDRVLEDLCFEN--TEWNGRQTSRYSVNRERLQPRAKLWNH 173

Query: 94  WIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVT 153
           ++K+++MPT+++ T+S+ R++L++   +  P+D+GRI+V+ +   + K   A+  P L+T
Sbjct: 174 FLKHKLMPTSYNTTVSLSRLLLLHSIKESCPIDVGRIIVQQVNDCLGKKASALVFPNLIT 233

Query: 154 RLCRASGLLPAADEEIRP 171
            LCR   +   A +EI P
Sbjct: 234 ALCRKKKVKENAFDEILP 248

[Close]
BLAST of Spg004874 vs. NCBI nr
Match: KAE8657620.1 (Detected protein of unknown function [Hibiscus syriacus])

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-08
Identity = 32/107 (29.91%), Postives = 63/107 (58.88%), Query Frame = 0 

Query: 65  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIP 124
           ++ +W+G   +R ++  + L      W H++K+++MPT+H+ T+S+  ++L++  MK   
Sbjct: 44  EKTEWNGRQTSRYSVNRERLQSRAKLWNHFLKHKLMPTSHNMTVSLSHLLLLHSIMKSRL 103

Query: 125 LDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADEEIRP 171
           +D+GRI+V+ +   + K   A+  P L+T LCR   +     +EI P
Sbjct: 104 IDMGRIIVQQVNDCLGKKASALVFPNLITALCRKKKVEENTFDEILP 150

[Close]
BLAST of Spg004874 vs. ExPASy TrEMBL
Match: A0A6A2Y697 (Reverse transcriptase domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111582pilonHSYRG01273 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.8e-10
Identity = 34/104 (32.69%), Postives = 64/104 (61.54%), Query Frame = 0 

Query: 68   KWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDL 127
            +W+G   +R ++  + L      W H++K+++MPT+H+ T+S+ R++L++  M   P+D+
Sbjct: 984  EWNGRQTSRYSVNRENLQLRAKLWNHFLKHKLMPTSHNTTVSLSRLLLLHSIMVSHPIDV 1043

Query: 128  GRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADEEIRP 171
            GRI+V+ +   ++K   A+  P L+T LCR   +   A +EI P
Sbjct: 1044 GRIIVQQVHDCLSKKASALVFPNLITTLCRKKKVEENAFDEILP 1087

[Close]
BLAST of Spg004874 vs. ExPASy TrEMBL
Match: A0A6A2WM54 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116939pilonHSYRG00213 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.4e-09
Identity = 34/107 (31.78%), Postives = 63/107 (58.88%), Query Frame = 0 

Query: 65  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIP 124
           +  +W+G   +R ++  + L      W H++KN++MPT+H+ T+S+ R++L++  M   P
Sbjct: 142 ENTEWNGRQTSRYSVNRERLQPRAKLWNHFLKNKLMPTSHNTTVSLSRLLLLHSIMVSRP 201

Query: 125 LDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADEEIRP 171
           +D+G I+V+ +   + K   A+  P L+T LCR   +   A +EI P
Sbjct: 202 IDVGCIIVQQVHDCLGKKASALVFPNLITTLCRKKKVEENAFDEILP 248

[Close]
BLAST of Spg004874 vs. ExPASy TrEMBL
Match: A0A6A3BU96 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110013pilonHSYRG00240 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.4e-09
Identity = 33/107 (30.84%), Postives = 64/107 (59.81%), Query Frame = 0 

Query: 65  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIP 124
           +  +W+G   +R ++  + L      W H++K+++MPT+H+ T+S+ R++L++  +   P
Sbjct: 142 ENTEWNGRQTSRYSVNRERLQPRAKLWNHFLKHKLMPTSHNTTVSLSRLLLLHSMIVSRP 201

Query: 125 LDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADEEIRP 171
           +D+GRI+V+ +   + K   A+  P L+T LCR   +   A +EI P
Sbjct: 202 IDVGRIIVQQVHDCLGKKASALVFPNLITALCRKKKVEENAFDEILP 248

[Close]
BLAST of Spg004874 vs. ExPASy TrEMBL
Match: A0A6A2YMQ9 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111372pilonHSYRG00020 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.8e-09
Identity = 39/138 (28.26%), Postives = 78/138 (56.52%), Query Frame = 0 

Query: 34  EKVGEDKGNFQEERGFSCTLPQTMTDQISQHKRAKWDGHGAAR-TLKSQLLDFEDTAWMH 93
           + V ++   F+EE   S T  + + D   ++   +W+G   +R ++  + L      W H
Sbjct: 114 QDVVDNHAKFEEEAD-SNTYDRVLEDLCFEN--TEWNGRQTSRYSVNRERLQPRAKLWNH 173

Query: 94  WIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVT 153
           ++K+++MPT+++ T+S+ R++L++   +  P+D+GRI+V+ +   + K   A+  P L+T
Sbjct: 174 FLKHKLMPTSYNTTVSLSRLLLLHSIKESCPIDVGRIIVQQVNDCLGKKASALVFPNLIT 233

Query: 154 RLCRASGLLPAADEEIRP 171
            LCR   +   A +EI P
Sbjct: 234 ALCRKKKVKENAFDEILP 248

[Close]
BLAST of Spg004874 vs. ExPASy TrEMBL
Match: A0A6A2WSK8 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116989pilonHSYRG00795 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.4e-09
Identity = 32/107 (29.91%), Postives = 63/107 (58.88%), Query Frame = 0 

Query: 65  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIP 124
           ++ +W+G   +R ++  + L      W H++K+++MPT+H+ T+S+  ++L++  MK   
Sbjct: 44  EKTEWNGRQTSRYSVNRERLQSRAKLWNHFLKHKLMPTSHNMTVSLSHLLLLHSIMKSRL 103

Query: 125 LDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADEEIRP 171
           +D+GRI+V+ +   + K   A+  P L+T LCR   +     +EI P
Sbjct: 104 IDMGRIIVQQVNDCLGKKASALVFPNLITALCRKKKVEENTFDEILP 150

The following BLAST results are available for this feature:
BLAST of Spg004874 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8676815.15.9e-1032.69hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus][more]
KAE8661093.12.9e-0931.78hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus][more]
KAE8718449.12.9e-0930.84hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus][more]
KAE8680640.13.8e-0928.26hypothetical protein F3Y22_tig00111372pilonHSYRG00020 [Hibiscus syriacus][more]
KAE8657620.11.1e-0829.91Detected protein of unknown function [Hibiscus syriacus][more]
BLAST of Spg004874 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg004874 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6A2Y6972.8e-1032.69Reverse transcriptase domain-containing protein OS=Hibiscus syriacus OX=106335 G... [more]
A0A6A2WM541.4e-0931.78Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116939pilon... [more]
A0A6A3BU961.4e-0930.84Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110013pilon... [more]
A0A6A2YMQ91.8e-0928.26Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111372pilon... [more]
A0A6A2WSK85.4e-0929.91Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116989pilon... [more]
BLAST of Spg004874 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg004874.1Spg004874.1mRNA