Spg004867 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg004867
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionhomeobox-DDT domain protein RLT3 isoform X2
Locationscaffold9: 19602529 .. 19608309 (+)
RNA-Seq ExpressionSpg004867
SyntenySpg004867
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAGAAATAGAGTTTGGAAAATTTCACGGGTATTTTAGTCCAAAGCGGATAAAGTTACGATATTTCTATAATCCAATGACATTTGCGGGCAGTACGGGCAGAACGGGGTTTATTAAAGCACAGAGATATTTCTTCTGGGTGTAAAACCCAAAACCCTACTTCTCTCTCTCTTCCACTCTTATTTCCCTGTTATCTCTTACTCTTCCCTTTCATAAGCTTCACTTTTCAAAACTCTCTTACTCTGTTCTTTCTTCCTCTCATTTCTTCTTCACCATTTCACACTCTCCATTTCTCTGCCGCTCCAATTCAATCAGATAGAGTGGAACTGACTGAATTCAACCAAGCCTCATCATGTGAGCAAGAGGAAGCGCTGTTGCACTTCTGTTTCAAAGGTAATTTTCATAATTCCTTCTGTTTTCCTCTCTTGTGGCTTACGTAAATGTGAAACTCCTCTTCTCTATGCTTCTGGAATTTTGGTGATCCGTGGTTGATAATGGAGTGTCCAAGTGGTCTCTCCTCTCACCTCCCCTCCCCACTCAACCTTTCAACCTCAAGCCTCATGATTTCAGTTGAATTCATCTTTCTTTTGGATTTTTCGGCTTCATCAGATAAGTTTTCTTTTTTAGCCATTGATTTGTTCTCCTTTTCATTATGGTGGAAGTGCGTAGTTGTTGTGTTAGTACTTAGTAATAGATATTGGTTTAAAGAAGATGAATTTTTGATTGAAGATATGAAGAACAAGTTGTTCTCCCTCTTACTTTTTCCCATCTGCGTTGGGTTGGAAAAGTATTAGTTGATATTTTGCAACTACCGGTGTTCACGCATTTTTTCATGCAAGTTCGGGATAAAAGTGGTACAATTCGTTTGGTTAGAATAATTTTTCTTTTTTCTGATTGGTTTGCGGAATGTACTGTGTGGCCACCTACTGGAGGGAGAAAATTTATTCAAGTTCCCATGGGTTTAAACAAAAAAGGTTGGTTTGTCTTTTGGGAGACGCTAAGCGATTTTCTTAAGTCTCAAGAGAAATTTTCAGACTCACCTATTGTTGATCATTTTGTTCATCCTTCTCGAAGTTATGTGAATGGTGTGATAAAAAATAGTGAAAGGACAACATTTTTAGAGGGACCGAGAGACATCCTTGTGAGGTTTGGGCTAATATTACATTTTCTATTTCTGTATGGGCCTCAGTTTCTAAGGCTTTTTGTAATTACCCGTTAGGTATGATTTTGATTGACTGGAAACCCTTTATGTAATTGGTTTCCTTTGTTTGGGGCTTGGTTTTTTGGATGTCCTTGTATTCTTTCATTTATTCTCAATGAAAGCTCGGTTCTTTATAAAAAAAAAAAAAAAAAAATGAAAGGACAACAGAGTTCAAAGATTCCTCTTGCTAATTACCCAAAGAATTCTTTAAGAAATCCTGTGATAATTCTTCCTCTTTATTCTTGTTGGGTTAGAAAAAACCAGGATGTGGTGTTTGTGGATTTTAACTAAACTTTGGTGGTATCTAGGCTGTTTGAACACTACAATTGGAAGGAGGTAAAGGAAACTTTGCAGGATCTTTTCCAGATTTCGGTGTTGATTAACCCTTTCATGGTTCATAAGGCGTTGCTTAAAGTAGATGAAGAGGTCTTTTTGAAGTCTTTAGAATTAAGTGGAAAATGACATCTTTATGGTGATCATTTGATTATTGAAGAATGGGATGAGACTAAGCACTCTCATGCAGAGTTTATAAAAGGATATGGGGGGATGGATTACAATCAAGAACTTACCTCTTCCTTATTGGGAAGACAGCTCCTTCAAAGCTATTGGAGAACACTTTGGGGGATTAGTTAGCATTTCCTCTCAAACCCTAAATATGTTGGATTGCAATGAAGCTAAAATTGAAGTCAAAAGGAATTTTTGTGGTTTCATTCCAGGCTTCCAACAAAAGTTGAAGTTACGGATAGGAAGCTTGGAAAATTTTCTCTTCAATTTGATAATGTTGATGGTTTGGTTCCTCAATATTGTTCATGGAAACTTATTTTTAAAAGACTTTTCAAATCCCCTGGATCACCTTCGTTTAAAGCAAGTCATGAAGGATGAAGGAGTGTTTGACTTTTTTGAAAAGGATGCTTCGATTCCAGCAAAAGACATTAATTGAATCCAATCCTTAATTATTCCAAGGAATGTTGATCAGTTGCATTCAAATGTCCCTTTACTTCCATAAATATCTATTACTAACACAACAACTACGCATGGCTGGCAATAAAAATCCCCATGGCTGGAAATTCTAGAAGGAGGTTCAATTATTAATTCTCATGCTTGCAATATGCTTTCAGACTGTGAAGTTATTGATCAAGGCTTGCATGACCAACATCATTTAATGAGCACAGTTGCTGAATTAGTGGATTGGGGACTCATTATCCCTGTAGCAGAGGAGGCAGCAGCTTGGAGAAATTGCCAGCCTTGGGGATTTTTGCTGTAACTTGTTGAAGGTATTAATGCAACCATGGCTAAGCTCCAGACAAAAAATTTAAATTTTTTGGGAGAGTGTCCCTTCCATAACGGTCGATAAAAAGCCTGCATTGGTCAAATTACCTGTGGATGCAAGCTTTCTAGTTAGTGATCTTGTGCAAGCTTTCTTGGCTTTTTCAATACTTCTAGCTCCATTATCAGAATTTTGGTTGGTTCATAATCAATGGATCTTCCAAAGCAAGTCTCTTTCATGGCTCGTTTGGTTTGAATCAACTCATCTAAAGGCCTATTCTTGAAGTTCTCTCAAAAATTTTTGTTGTCTTCTCATCATAGGACTTTCGTCTGATTTGGAATGCTTTTATTTATCCTTTGTATTTTGTTTTGTTTTGACCTTATGGTTTTTATTGTTTCTCTTTTTTTTTTCACTCCCTTGTAGAGTTTGTATCCTTTGAGCATTAGTCTCTTTTCATTTCATCACTGAAAAGTTTTGTATCTTATTAAAAAAAAAGGTGGAATTGATTCTGGAGTGGGGGTGAGGGGTGTGAGCAATTCAGTCAAACTTTAGGCTGCTGGCGATAGAATATTAGAGTGAAACTGAGGTTCACACTGTGAAATGACTGAGTTTTCAGCATATGGAATTAGAATTTTGTTCTGTTGTAGTTTTGGAGAATATGCACATTGCATGCGTGGAGTTGTTCAATGAAAATTGTACTAAAAGGGTTCTGAAGAGTCTAGTTTTTGACTTTATTGCTTGTGTCCGGCTGGGTTGGCTTTTGATTTCCTTCGCTTGTGCATGATTTTCTTCTTTGCGTTGTTCTATTGTTGGATTTATTTTCTGCCGTAATATGCAGATGGTGGAGAGCTCAAATAGAAGTTGGTTCTGATTGTACTTATTTTGACCTGAATGTTTTCTCTAAAAACAAATAAAAAAACGGAAATCCGCAAGCTTCAAGCAATGCCATAAACTCAAAATTTTAAATTTCCATTTTTTTTTGACTTTATTACTTTCTCTACAAAAATTGGATTGTATTTATTAACTAACACTCAGTTCTACTCTTTTTGGTTGGTTGGCTTTCAGATTTCCTTGCATTATAGAATCTGGAGAAATGGAATTTAGGAGGAAAACGCCTCAACAGCTTCAAGCCCTTGATACGTTATATTCAGGTAAACTTGTAAATATAGATTGAGCATTTTACATGCCTGTCACTTGTAAGTGCTAGTTCGTAATTTCTCCATCCAGATTAATGTAGTTAGTTACTTGTCATAAATATCAAATCAACTTTCACCTGTACTCGTTCAGGGTCTCATTTCCAAGACATCTTTTACCTCTATTTGTTTGAAATAAGTTTAGTGTTTCTACTCTTCTTACTTCTTATTCTTGCAGAGGACAAATATCCTACGCAAAGCACATTGGAAACGTATGCTGCCACTTTAGGATTGACCTGCAGGCAGGTACAAGGATGGTTTGCTCAGAAGAGGAGGAGGGACAAAAGGGAGGATGAAATGATAGTATCATCTACTGGTAATGAACATAGGCTCAGCCGAAGAAATGAGTCTGATCTTACACATGCAGGGAGGACTCAAAATTCAAAAAATAAATTTAAAACTATGGTTGAGGGCAACATTGTTAATAGAAGGAAGAGGTTCGATTCAATTCAGAGTTTGCTTTCTTCAGATTACAATCTGATGAAGGTATTTCGCAAAGATGGCCCTCCTTTGGGTTTAGAATTTGATCATATTCCCTCTGGAGCATTTCTCCGTTGCAAAGGTATCCTGCAGGTTACAAGCTCTCGCCTATTTTCCTAGTAACCTAAGAAAGCATATAAATAATAAAACATGTTGTGTAAATCATCCTATTAATGGATTAGTTGGTTGTCAGAATATTATGAAAGAAAGTTGGCTGTATTTTGGGCTTGCTAATGCCTGTTAACCAGTCTTTCTTATCTATCTAATTGACGTAGATGCTACTTTCACTACAACTTTTACATGCCACTGACATCATTTTTTTTTTCATGTAATTAAACATTTCCACATTCATGAACATTATTCTCAAAAGTTACATTGTACATATCATCCTCCCGTTAATCATATTATGCTTGGGTGATTAAGGACCGAATTATCTTTAGGGGAACAGGAATTAGTAGTTGTTATTTCTACGTATTGTCATGTTTTTATGTGTTTAAGATACTACTATGACTTCATTTTCTGTTATCAATGAAATAGTTTCTTATAAACAAACCTTATATTTGTTTTTCTGCCCTTCATGTGGATTGGGGTCTGTTTTCTGGGAGGCCATCCTTGTTCTGTTCATTCTTATTCATGAAAGTTCTTTTTTCTTTGAAGTTGGCAACCCAGACAAAGTATTTCCCCTTGTTGGAAGTTGGCTCATTCATTTTTATTCAATGACTTCTCTTTCAAGTTGGAAATGGTGCAGGGATTAGGTTTTGGGAAAACTAGGGGCTTATCAACTGTCCCCTTTGGGTATTATTCTCTGCTGTTTAGCAAAGATGATTTTCCATTTAACGTACAGGGATAATACAACCTTATAAATTAAGGGGAAGAAGCCGATTTTCTCAGGAAATAATTAAACCGAACAAACTTTGTTCCGGCAGGAAATCAAACAATTTCATAGAAAGTATGTAGAAGGAAATTCAAGCCCCATATGAAGGTAGATTACAAAAAACTCTTCCAATTTGGACAAAGATCACATGAATTCTAGTTGTTGAAAGAGGCTACAATTTATTTCCAAAGAGCCCAAAAATATATATTTTTTGGACAAAAGAGAATAGTTTTAAGCTATCTAAAGTATTTTCTATACTGTTGAAGTGTTCCTCTCTAGTCTTAAATTCCATCGAAGCCAACGAATCTTCTTTTTCTAGTTGGAAAGGGTGGCTAACCATGATATAATCAAGGAGGACTTTTTAGCTATAAGGAAGGGACATGTTAGTTGAAGGAGAGAAGGACTTAATCATGAAAACACATCTAAGAAAAAGGAGGCTTTGAGATTCTGCCTCTTTTAGTATATGATACACCATCACAAAGAGAAAGGGAAGAGTACATCCATTGTATCAAAATACAGGTGTTTTTAATCCCACAACAAAGTACCACAATTAGAATTTAAAGCTACCAAGGATATTCTTTGTATAAATTATAAAATGAGATATGAGGTACTAAAGTGCTTAAAGTGAAAGTATCGTCGTTGAGACTTCACATTCTCTCCGCCAGCCAATGAGGCTTGCTGCTACTCCTTTTCTGCTCCATCAATTGACCGCTGCCGTCGGCTTTGCCACCGCTGACGATACATCTGCTGCCATGTCTTCTTGA

mRNA sequence

ATGCGAGAAATAGAGTTTGGAAAATTTCACGGGTATTTTAGTCCAAAGCGGATAAACTTCACTTTTCAAAACTCTCTTACTCTGTTCTTTCTTCCTCTCATTTCTTCTTCACCATTTCACACTCTCCATTTCTCTGCCGCTCCAATTCAATCAGATAGAGTGGAACTGACTGAATTCAACCAAGCCTCATCATGTGAGCAAGAGGAAGCGCTGTTGCACTTCTGTTTCAAAGGTATGATTTTGATTGACTGGAAACCCTTTATGCTTCCAACAAAAGTTGAAGTTACGGATAGGAAGCTTGGAAAATTTTCTCTTCAATTTGATAATGTTGATGGTTTGGTTCCTCAATATTACTGTGAAGTTATTGATCAAGGCTTGCATGACCAACATCATTTAATGAGCACAGTTGCTGAATTAGTGGATTGGGGACTCATTATCCCTGTAGCAGAGGAGGCAGCAGCTTGGAGAAATTGCCAGCCTTGGGGATTTTTGCTATTTCCTTGCATTATAGAATCTGGAGAAATGGAATTTAGGAGGAAAACGCCTCAACAGCTTCAAGCCCTTGATACGTTATATTCAGAGGACAAATATCCTACGCAAAGCACATTGGAAACGTATGCTGCCACTTTAGGATTGACCTGCAGGCAGGTACAAGGATGGTTTGCTCAGAAGAGGAGGAGGGACAAAAGGGAGGATGAAATGATAGTATCATCTACTGGTAATGAACATAGGCTCAGCCGAAGAAATGAGTCTGATCTTACACATGCAGGGAGGACTCAAAATTCAAAAAATAAATTTAAAACTATGGTTGAGGGCAACATTGTTAATAGAAGGAAGAGGTTCGATTCAATTCAGAGTTTGCTTTCTTCAGATTACAATCTGATGAAGGTATTTCGCAAAGATGGCCCTCCTTTGGGTTTAGAATTTGATCATATTCCCTCTGGAGCATTTCTCCGTTGCAAAGGTATCCTGCAGGTTACAAGCTCTCGCCTATTTTCCTATATCGTCGTTGAGACTTCACATTCTCTCCGCCAGCCAATGAGGCTTGCTGCTACTCCTTTTCTGCTCCATCAATTGACCGCTGCCGTCGGCTTTGCCACCGCTGACGATACATCTGCTGCCATGTCTTCTTGA

Coding sequence (CDS)

ATGCGAGAAATAGAGTTTGGAAAATTTCACGGGTATTTTAGTCCAAAGCGGATAAACTTCACTTTTCAAAACTCTCTTACTCTGTTCTTTCTTCCTCTCATTTCTTCTTCACCATTTCACACTCTCCATTTCTCTGCCGCTCCAATTCAATCAGATAGAGTGGAACTGACTGAATTCAACCAAGCCTCATCATGTGAGCAAGAGGAAGCGCTGTTGCACTTCTGTTTCAAAGGTATGATTTTGATTGACTGGAAACCCTTTATGCTTCCAACAAAAGTTGAAGTTACGGATAGGAAGCTTGGAAAATTTTCTCTTCAATTTGATAATGTTGATGGTTTGGTTCCTCAATATTACTGTGAAGTTATTGATCAAGGCTTGCATGACCAACATCATTTAATGAGCACAGTTGCTGAATTAGTGGATTGGGGACTCATTATCCCTGTAGCAGAGGAGGCAGCAGCTTGGAGAAATTGCCAGCCTTGGGGATTTTTGCTATTTCCTTGCATTATAGAATCTGGAGAAATGGAATTTAGGAGGAAAACGCCTCAACAGCTTCAAGCCCTTGATACGTTATATTCAGAGGACAAATATCCTACGCAAAGCACATTGGAAACGTATGCTGCCACTTTAGGATTGACCTGCAGGCAGGTACAAGGATGGTTTGCTCAGAAGAGGAGGAGGGACAAAAGGGAGGATGAAATGATAGTATCATCTACTGGTAATGAACATAGGCTCAGCCGAAGAAATGAGTCTGATCTTACACATGCAGGGAGGACTCAAAATTCAAAAAATAAATTTAAAACTATGGTTGAGGGCAACATTGTTAATAGAAGGAAGAGGTTCGATTCAATTCAGAGTTTGCTTTCTTCAGATTACAATCTGATGAAGGTATTTCGCAAAGATGGCCCTCCTTTGGGTTTAGAATTTGATCATATTCCCTCTGGAGCATTTCTCCGTTGCAAAGGTATCCTGCAGGTTACAAGCTCTCGCCTATTTTCCTATATCGTCGTTGAGACTTCACATTCTCTCCGCCAGCCAATGAGGCTTGCTGCTACTCCTTTTCTGCTCCATCAATTGACCGCTGCCGTCGGCTTTGCCACCGCTGACGATACATCTGCTGCCATGTCTTCTTGA

Protein sequence

MREIEFGKFHGYFSPKRINFTFQNSLTLFFLPLISSSPFHTLHFSAAPIQSDRVELTEFNQASSCEQEEALLHFCFKGMILIDWKPFMLPTKVEVTDRKLGKFSLQFDNVDGLVPQYYCEVIDQGLHDQHHLMSTVAELVDWGLIIPVAEEAAAWRNCQPWGFLLFPCIIESGEMEFRRKTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRDKREDEMIVSSTGNEHRLSRRNESDLTHAGRTQNSKNKFKTMVEGNIVNRRKRFDSIQSLLSSDYNLMKVFRKDGPPLGLEFDHIPSGAFLRCKGILQVTSSRLFSYIVVETSHSLRQPMRLAATPFLLHQLTAAVGFATADDTSAAMSS
Homology
[Close]
BLAST of Spg004867 vs. NCBI nr
Match: XP_022144421.1 (homeobox-DDT domain protein RLT3 isoform X2 [Momordica charantia])

HSP 1 Score: 183.3 bits (464), Expect = 3.8e-42
Identity = 94/148 (63.51%), Postives = 108/148 (72.97%), Query Frame = 0 

Query: 175 MEFRRKTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRDKREDEM 234
           MEF+RKTPQQLQALDT YSEDKYPTQS LE Y+A LGLT RQVQGWFAQKRRRD+  +  
Sbjct: 1   MEFKRKTPQQLQALDTFYSEDKYPTQSALEEYSAALGLTYRQVQGWFAQKRRRDRENETT 60

Query: 235 IVSSTGNEHRLSRRNESDLTHAGRTQNSKNKFKTMVEGNIVNRRKRFDSIQSLLSSDYNL 294
           + SST                 GRT +SK K++TMVEGNIV R+K+ D+IQ L S DY L
Sbjct: 61  VTSST-----------------GRTLSSKYKYRTMVEGNIVKRKKKLDAIQGLHSPDYIL 120

Query: 295 MKVFRKDGPPLGLEFDHIPSGAFLRCKG 323
            KV  KDGPPLG +FD +PSGAFL+CKG
Sbjct: 121 TKVLHKDGPPLGADFDCLPSGAFLQCKG 131

[Close]
BLAST of Spg004867 vs. NCBI nr
Match: XP_022144420.1 (homeobox-DDT domain protein RLT3 isoform X1 [Momordica charantia])

HSP 1 Score: 183.3 bits (464), Expect = 3.8e-42
Identity = 94/148 (63.51%), Postives = 108/148 (72.97%), Query Frame = 0 

Query: 175 MEFRRKTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRDKREDEM 234
           MEF+RKTPQQLQALDT YSEDKYPTQS LE Y+A LGLT RQVQGWFAQKRRRD+  +  
Sbjct: 1   MEFKRKTPQQLQALDTFYSEDKYPTQSALEEYSAALGLTYRQVQGWFAQKRRRDRENETT 60

Query: 235 IVSSTGNEHRLSRRNESDLTHAGRTQNSKNKFKTMVEGNIVNRRKRFDSIQSLLSSDYNL 294
           + SST                 GRT +SK K++TMVEGNIV R+K+ D+IQ L S DY L
Sbjct: 61  VTSST-----------------GRTLSSKYKYRTMVEGNIVKRKKKLDAIQGLHSPDYIL 120

Query: 295 MKVFRKDGPPLGLEFDHIPSGAFLRCKG 323
            KV  KDGPPLG +FD +PSGAFL+CKG
Sbjct: 121 TKVLHKDGPPLGADFDCLPSGAFLQCKG 131

[Close]
BLAST of Spg004867 vs. NCBI nr
Match: XP_041006835.1 (homeobox-DDT domain protein RLT3 isoform X1 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 130.2 bits (326), Expect = 3.8e-26
Identity = 77/160 (48.12%), Postives = 98/160 (61.25%), Query Frame = 0 

Query: 175 MEFRRKTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRDKREDEM 234
           ME +RKTP QLQ+L+ LYSEDKYPT+  +E YAA LGL  +QVQGWF +KRRRDKRE+  
Sbjct: 1   MEMKRKTPSQLQSLERLYSEDKYPTKEVMEDYAAALGLVYKQVQGWFVEKRRRDKRENGF 60

Query: 235 IVSSTG---NEHR-LSRRNES-------------DLTHAGRTQNSKNKFKTMVEGNIVNR 294
           IV S      +H  L+RRN S              +  A    +S  +  +  +     R
Sbjct: 61  IVPSHSALIKKHPILTRRNGSGSISATKVSKGDLSMRMAESPSSSIYRRPSTAKNKSAKR 120

Query: 295 RKRFDSIQSLLSSDYNLMKVFRKDGPPLGLEFDHIPSGAF 318
           +K+   +Q+LL+ DY L KVFRKDGPPLG EFD +PSG F
Sbjct: 121 KKQVFLLQNLLTPDYILKKVFRKDGPPLGSEFDSLPSGQF 160

[Close]
BLAST of Spg004867 vs. NCBI nr
Match: XP_041006836.1 (homeobox-DDT domain protein RLT3 isoform X2 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 130.2 bits (326), Expect = 3.8e-26
Identity = 77/160 (48.12%), Postives = 98/160 (61.25%), Query Frame = 0 

Query: 175 MEFRRKTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRDKREDEM 234
           ME +RKTP QLQ+L+ LYSEDKYPT+  +E YAA LGL  +QVQGWF +KRRRDKRE+  
Sbjct: 1   MEMKRKTPSQLQSLERLYSEDKYPTKEVMEDYAAALGLVYKQVQGWFVEKRRRDKRENGF 60

Query: 235 IVSSTG---NEHR-LSRRNES-------------DLTHAGRTQNSKNKFKTMVEGNIVNR 294
           IV S      +H  L+RRN S              +  A    +S  +  +  +     R
Sbjct: 61  IVPSHSALIKKHPILTRRNGSGSISATKVSKGDLSMRMAESPSSSIYRRPSTAKNKSAKR 120

Query: 295 RKRFDSIQSLLSSDYNLMKVFRKDGPPLGLEFDHIPSGAF 318
           +K+   +Q+LL+ DY L KVFRKDGPPLG EFD +PSG F
Sbjct: 121 KKQVFLLQNLLTPDYILKKVFRKDGPPLGSEFDSLPSGQF 160

[Close]
BLAST of Spg004867 vs. NCBI nr
Match: KAF3432306.1 (hypothetical protein FNV43_RR27046 [Rhamnella rubrinervis])

HSP 1 Score: 129.8 bits (325), Expect = 5.0e-26
Identity = 79/170 (46.47%), Postives = 102/170 (60.00%), Query Frame = 0 

Query: 175 MEFRRKTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRDKREDEM 234
           M  +RKT  QL+ LD LY ED YPTQ  L+ +AA LGLT +Q+Q WF QKR +DKRE+++
Sbjct: 1   MGIKRKTALQLEVLDKLYLEDNYPTQRALQDHAAALGLTYKQMQRWFVQKRGKDKRENKI 60

Query: 235 IVSSTGNEHRLSRRNESDLTHAGRTQNSKNKFKTMVEGNIVNRRKRFDSIQ-SLLSSDYN 294
           IV       +++ R         +T +SK+K   MVE   VNR+K  +  Q    + DY 
Sbjct: 61  IVPFHSTLSKVTSR---------KTSSSKHKQACMVEEKFVNRKKNHNQFQEDFFTPDYI 120

Query: 295 LMKVFRKDGPPLGLEFDHIPSGAFLRCKGILQVTSSRLFSYIVVETSHSL 344
           L KVFRKDGPPLG+EFD +PSGAF       Q  S RL     V T+H+L
Sbjct: 121 LRKVFRKDGPPLGVEFDALPSGAFSSQCQENQRASKRLKVSKHVVTNHTL 161

[Close]
BLAST of Spg004867 vs. ExPASy Swiss-Prot
Match: F4JRF5 (Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana OX=3702 GN=RLT3 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 9.7e-17
Identity = 59/140 (42.14%), Postives = 78/140 (55.71%), Query Frame = 0 

Query: 178 RRKTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRDKREDEMIVS 237
           +RK+P Q+QAL+  Y E  YPT   +E    +LGLT ++V+GWF ++R R K      V 
Sbjct: 2   KRKSPLQVQALEGFYLEQMYPTPKEMEDLGKSLGLTLKEVRGWFKRRRSRGKG-----VK 61

Query: 238 STGNEHRLSRRNESDLTHAGRTQNSKNKFKTMVEGN-IVNRRKRFDSIQSLLSSDYNLMK 297
           S  N+   ++  +       R+  S       VE   IV  RK   S Q+LL S + L K
Sbjct: 62  SMANDGLGAKNPQLYDRSLMRSSTSSRCVGVAVEERCIVGTRKA--SCQNLLPSSHILAK 121

Query: 298 VFRKDGPPLGLEFDHIPSGA 317
           VFRKDGP LG EFDH+PSGA
Sbjct: 122 VFRKDGPSLGSEFDHLPSGA 134

[Close]
BLAST of Spg004867 vs. ExPASy Swiss-Prot
Match: F4HY56 (Homeobox-DDT domain protein RLT1 OS=Arabidopsis thaliana OX=3702 GN=RLT1 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.2e-08
Identity = 47/171 (27.49%), Postives = 84/171 (49.12%), Query Frame = 0 

Query: 180 KTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRDKRE-------- 239
           KTP QL+ L+ +YSE+KYP+++T    +  L L+ RQ+Q WF  +R +DK++        
Sbjct: 46  KTPFQLETLEKVYSEEKYPSEATRAELSEKLDLSDRQLQMWFCHRRLKDKKDGQSNKPVK 105

Query: 240 ----------------------DEMIVSSTGNEHRLSRRNESDLTHAGRTQNSK---NKF 299
                                 ++   S +G+E   S  + S    A  + +S+   +++
Sbjct: 106 SSVAAVQSASVNELPAAAGSVPEQDSRSDSGSESGCSPYSNSRRNFASGSSSSRAELDEY 165

Query: 300 KTMVEGNIVNRRKRFDSIQSLLSSDYNLMKVFRKDGPPLGLEFDHIPSGAF 318
           +TM + +  +R       ++++  +  L +  R DGP LG+EFD +P GAF
Sbjct: 166 ETMGKPSYESRLSTMVH-RAIVCIEAQLGEPLRDDGPILGMEFDPLPPGAF 215

[Close]
BLAST of Spg004867 vs. ExPASy Swiss-Prot
Match: Q9FFH1 (Homeobox-DDT domain protein RLT2 OS=Arabidopsis thaliana OX=3702 GN=RLT2 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.4e-07
Identity = 47/157 (29.94%), Postives = 74/157 (47.13%), Query Frame = 0 

Query: 173 GEMEFRR--KTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRD-- 232
           GE + +R  KT  QL+ L+  YS + YP+++     +  L L+ RQ+Q WF  +R ++  
Sbjct: 15  GESKSKRKMKTAAQLEVLENTYSAEPYPSEAIRADLSVKLNLSDRQLQMWFCHRRLKERK 74

Query: 233 -----KREDEMIVSSTGNEHRLSRRNESDLTHAGRTQNSKNKFKTMVEGNIVNRRKRFDS 292
                KR+ + +V+ T  E      N  DL       + +    +   G  V RR    S
Sbjct: 75  STTPSKRQRKELVTPTAMESWEPPVNAGDLVAGNELDSRRAARGSGGSGVTVVRRFNEPS 134

Query: 293 IQSLLSSDY---NLMKVFRKDGPPLGLEFDHIPSGAF 318
              + +  Y    L +  R +GP LG+EFD +P GAF
Sbjct: 135 SAEVRAIGYVEAQLGERLRDNGPVLGMEFDPLPPGAF 171

[Close]
BLAST of Spg004867 vs. ExPASy TrEMBL
Match: A0A6J1CTC7 (homeobox-DDT domain protein RLT3 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014110 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.8e-42
Identity = 94/148 (63.51%), Postives = 108/148 (72.97%), Query Frame = 0 

Query: 175 MEFRRKTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRDKREDEM 234
           MEF+RKTPQQLQALDT YSEDKYPTQS LE Y+A LGLT RQVQGWFAQKRRRD+  +  
Sbjct: 1   MEFKRKTPQQLQALDTFYSEDKYPTQSALEEYSAALGLTYRQVQGWFAQKRRRDRENETT 60

Query: 235 IVSSTGNEHRLSRRNESDLTHAGRTQNSKNKFKTMVEGNIVNRRKRFDSIQSLLSSDYNL 294
           + SST                 GRT +SK K++TMVEGNIV R+K+ D+IQ L S DY L
Sbjct: 61  VTSST-----------------GRTLSSKYKYRTMVEGNIVKRKKKLDAIQGLHSPDYIL 120

Query: 295 MKVFRKDGPPLGLEFDHIPSGAFLRCKG 323
            KV  KDGPPLG +FD +PSGAFL+CKG
Sbjct: 121 TKVLHKDGPPLGADFDCLPSGAFLQCKG 131

[Close]
BLAST of Spg004867 vs. ExPASy TrEMBL
Match: A0A6J1CRK0 (homeobox-DDT domain protein RLT3 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014110 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.8e-42
Identity = 94/148 (63.51%), Postives = 108/148 (72.97%), Query Frame = 0 

Query: 175 MEFRRKTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRDKREDEM 234
           MEF+RKTPQQLQALDT YSEDKYPTQS LE Y+A LGLT RQVQGWFAQKRRRD+  +  
Sbjct: 1   MEFKRKTPQQLQALDTFYSEDKYPTQSALEEYSAALGLTYRQVQGWFAQKRRRDRENETT 60

Query: 235 IVSSTGNEHRLSRRNESDLTHAGRTQNSKNKFKTMVEGNIVNRRKRFDSIQSLLSSDYNL 294
           + SST                 GRT +SK K++TMVEGNIV R+K+ D+IQ L S DY L
Sbjct: 61  VTSST-----------------GRTLSSKYKYRTMVEGNIVKRKKKLDAIQGLHSPDYIL 120

Query: 295 MKVFRKDGPPLGLEFDHIPSGAFLRCKG 323
            KV  KDGPPLG +FD +PSGAFL+CKG
Sbjct: 121 TKVLHKDGPPLGADFDCLPSGAFLQCKG 131

[Close]
BLAST of Spg004867 vs. ExPASy TrEMBL
Match: W9QMQ0 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011346 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.1e-26
Identity = 72/148 (48.65%), Postives = 89/148 (60.14%), Query Frame = 0 

Query: 175 MEFRRKTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRDKREDEM 234
           ME +RKTP+QL+ALD  Y E+ YPT   +E YAATLGLT +QV+GWF +KRR++KRE   
Sbjct: 1   MEIKRKTPRQLEALDPFYLENNYPTPVEMEDYAATLGLTYKQVRGWFVEKRRKEKREGLA 60

Query: 235 IVSSTGNEHRLSRRNESDLTHAGRTQNSKNKFKTMVEGNIVNRRKRFDSIQSLLSSDYNL 294
            V          R + S   H     NSK K    V+  +  R+ +   +Q L   DY L
Sbjct: 61  TV---------PRTSSSKCKH-----NSKCKQMLTVKNAVAKRKNKQSHLQDLFMPDYIL 120

Query: 295 MKVFRKDGPPLGLEFDHIPSGAFLRCKG 323
            KVFRKDGPPLGLEFD +PS  F  CKG
Sbjct: 121 RKVFRKDGPPLGLEFDTLPSTRFFPCKG 134

[Close]
BLAST of Spg004867 vs. ExPASy TrEMBL
Match: A0A2I4G2C3 (homeobox-DDT domain protein RLT3 isoform X3 OS=Juglans regia OX=51240 GN=LOC109004075 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.0e-26
Identity = 76/160 (47.50%), Postives = 98/160 (61.25%), Query Frame = 0 

Query: 175 MEFRRKTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRDKREDEM 234
           ME +RKTP QLQ+L+ LYSEDKYPT+  +E YAA LGL  +QVQGWF +KRRRDKRE+  
Sbjct: 1   MEMKRKTPSQLQSLERLYSEDKYPTKEVMEDYAAALGLVYKQVQGWFVEKRRRDKRENGF 60

Query: 235 IVSSTG---NEHR-LSRRNES-------------DLTHAGRTQNSKNKFKTMVEGNIVNR 294
           IV S      +H  L+RRN S              +  A    +S  +  +  +     R
Sbjct: 61  IVPSHSALIKKHPILTRRNGSGSISATKVSKGDLSMRMAESPSSSIYRRPSTAKNKSAKR 120

Query: 295 RKRFDSIQSLLSSDYNLMKVFRKDGPPLGLEFDHIPSGAF 318
           +K+   +Q+LL+ D+ L KVFRKDGPPLG EFD +PSG F
Sbjct: 121 KKQVFLLQNLLTPDHILKKVFRKDGPPLGSEFDSLPSGPF 160

[Close]
BLAST of Spg004867 vs. ExPASy TrEMBL
Match: A0A6P9ES70 (homeobox-DDT domain protein RLT3 isoform X1 OS=Juglans regia OX=51240 GN=LOC109004075 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.0e-26
Identity = 76/160 (47.50%), Postives = 98/160 (61.25%), Query Frame = 0 

Query: 175 MEFRRKTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRDKREDEM 234
           ME +RKTP QLQ+L+ LYSEDKYPT+  +E YAA LGL  +QVQGWF +KRRRDKRE+  
Sbjct: 1   MEMKRKTPSQLQSLERLYSEDKYPTKEVMEDYAAALGLVYKQVQGWFVEKRRRDKRENGF 60

Query: 235 IVSSTG---NEHR-LSRRNES-------------DLTHAGRTQNSKNKFKTMVEGNIVNR 294
           IV S      +H  L+RRN S              +  A    +S  +  +  +     R
Sbjct: 61  IVPSHSALIKKHPILTRRNGSGSISATKVSKGDLSMRMAESPSSSIYRRPSTAKNKSAKR 120

Query: 295 RKRFDSIQSLLSSDYNLMKVFRKDGPPLGLEFDHIPSGAF 318
           +K+   +Q+LL+ D+ L KVFRKDGPPLG EFD +PSG F
Sbjct: 121 KKQVFLLQNLLTPDHILKKVFRKDGPPLGSEFDSLPSGPF 160

[Close]
BLAST of Spg004867 vs. TAIR 10
Match: AT4G12750.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 89.4 bits (220), Expect = 6.9e-18
Identity = 59/140 (42.14%), Postives = 78/140 (55.71%), Query Frame = 0 

Query: 178 RRKTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRDKREDEMIVS 237
           +RK+P Q+QAL+  Y E  YPT   +E    +LGLT ++V+GWF ++R R K      V 
Sbjct: 2   KRKSPLQVQALEGFYLEQMYPTPKEMEDLGKSLGLTLKEVRGWFKRRRSRGKG-----VK 61

Query: 238 STGNEHRLSRRNESDLTHAGRTQNSKNKFKTMVEGN-IVNRRKRFDSIQSLLSSDYNLMK 297
           S  N+   ++  +       R+  S       VE   IV  RK   S Q+LL S + L K
Sbjct: 62  SMANDGLGAKNPQLYDRSLMRSSTSSRCVGVAVEERCIVGTRKA--SCQNLLPSSHILAK 121

Query: 298 VFRKDGPPLGLEFDHIPSGA 317
           VFRKDGP LG EFDH+PSGA
Sbjct: 122 VFRKDGPSLGSEFDHLPSGA 134

[Close]
BLAST of Spg004867 vs. TAIR 10
Match: AT1G28420.1 (homeobox-1 )

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-09
Identity = 47/171 (27.49%), Postives = 84/171 (49.12%), Query Frame = 0 

Query: 180 KTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRDKRE-------- 239
           KTP QL+ L+ +YSE+KYP+++T    +  L L+ RQ+Q WF  +R +DK++        
Sbjct: 46  KTPFQLETLEKVYSEEKYPSEATRAELSEKLDLSDRQLQMWFCHRRLKDKKDGQSNKPVK 105

Query: 240 ----------------------DEMIVSSTGNEHRLSRRNESDLTHAGRTQNSK---NKF 299
                                 ++   S +G+E   S  + S    A  + +S+   +++
Sbjct: 106 SSVAAVQSASVNELPAAAGSVPEQDSRSDSGSESGCSPYSNSRRNFASGSSSSRAELDEY 165

Query: 300 KTMVEGNIVNRRKRFDSIQSLLSSDYNLMKVFRKDGPPLGLEFDHIPSGAF 318
           +TM + +  +R       ++++  +  L +  R DGP LG+EFD +P GAF
Sbjct: 166 ETMGKPSYESRLSTMVH-RAIVCIEAQLGEPLRDDGPILGMEFDPLPPGAF 215

[Close]
BLAST of Spg004867 vs. TAIR 10
Match: AT4G03250.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 4.5e-09
Identity = 53/207 (25.60%), Postives = 79/207 (38.16%), Query Frame = 0 

Query: 180 KTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRDKREDEMIVSST 239
           KTP Q+ AL+  Y+E KYPT+      A  +GLT +QV GWF  +R +DKR  +   ++ 
Sbjct: 26  KTPMQVMALENFYNEHKYPTEEMKGKLAEEVGLTEKQVSGWFCHRRLKDKRHVKEDGNAI 85

Query: 240 GNEHRLS----------------------------RRNESDLTHAGRTQ----------- 299
           G++ R S                            R  ES   + G              
Sbjct: 86  GSQDRSSVVLQDRGSGLRQDSCGSTKQTDYWNPKPREVESQRLYMGNADGEDSTSSDRSS 145

Query: 300 -------NSKNKFKTMVEGNIVNRRKRFDSIQSLLSSDYN-------------------- 318
                  +SK+  + +     V  +      Q + S  YN                    
Sbjct: 146 SLRKNLVSSKDGIRDVESSRYVAHKDVIQHPQFMRSYGYNKPSGYLKVKGESENFAITAV 205

[Close]
BLAST of Spg004867 vs. TAIR 10
Match: AT5G44180.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-08
Identity = 47/157 (29.94%), Postives = 74/157 (47.13%), Query Frame = 0 

Query: 173 GEMEFRR--KTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRD-- 232
           GE + +R  KT  QL+ L+  YS + YP+++     +  L L+ RQ+Q WF  +R ++  
Sbjct: 15  GESKSKRKMKTAAQLEVLENTYSAEPYPSEAIRADLSVKLNLSDRQLQMWFCHRRLKERK 74

Query: 233 -----KREDEMIVSSTGNEHRLSRRNESDLTHAGRTQNSKNKFKTMVEGNIVNRRKRFDS 292
                KR+ + +V+ T  E      N  DL       + +    +   G  V RR    S
Sbjct: 75  STTPSKRQRKELVTPTAMESWEPPVNAGDLVAGNELDSRRAARGSGGSGVTVVRRFNEPS 134

Query: 293 IQSLLSSDY---NLMKVFRKDGPPLGLEFDHIPSGAF 318
              + +  Y    L +  R +GP LG+EFD +P GAF
Sbjct: 135 SAEVRAIGYVEAQLGERLRDNGPVLGMEFDPLPPGAF 171

[Close]
BLAST of Spg004867 vs. TAIR 10
Match: AT5G44180.2 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-08
Identity = 47/157 (29.94%), Postives = 74/157 (47.13%), Query Frame = 0 

Query: 173 GEMEFRR--KTPQQLQALDTLYSEDKYPTQSTLETYAATLGLTCRQVQGWFAQKRRRD-- 232
           GE + +R  KT  QL+ L+  YS + YP+++     +  L L+ RQ+Q WF  +R ++  
Sbjct: 15  GESKSKRKMKTAAQLEVLENTYSAEPYPSEAIRADLSVKLNLSDRQLQMWFCHRRLKERK 74

Query: 233 -----KREDEMIVSSTGNEHRLSRRNESDLTHAGRTQNSKNKFKTMVEGNIVNRRKRFDS 292
                KR+ + +V+ T  E      N  DL       + +    +   G  V RR    S
Sbjct: 75  STTPSKRQRKELVTPTAMESWEPPVNAGDLVAGNELDSRRAARGSGGSGVTVVRRFNEPS 134

Query: 293 IQSLLSSDY---NLMKVFRKDGPPLGLEFDHIPSGAF 318
              + +  Y    L +  R +GP LG+EFD +P GAF
Sbjct: 135 SAEVRAIGYVEAQLGERLRDNGPVLGMEFDPLPPGAF 171

The following BLAST results are available for this feature:
BLAST of Spg004867 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022144421.13.8e-4263.51homeobox-DDT domain protein RLT3 isoform X2 [Momordica charantia][more]
XP_022144420.13.8e-4263.51homeobox-DDT domain protein RLT3 isoform X1 [Momordica charantia][more]
XP_041006835.13.8e-2648.13homeobox-DDT domain protein RLT3 isoform X1 [Juglans microcarpa x Juglans regia][more]
XP_041006836.13.8e-2648.13homeobox-DDT domain protein RLT3 isoform X2 [Juglans microcarpa x Juglans regia][more]
KAF3432306.15.0e-2646.47hypothetical protein FNV43_RR27046 [Rhamnella rubrinervis][more]
BLAST of Spg004867 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4JRF59.7e-1742.14Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana OX=3702 GN=RLT3 PE=3 SV... [more]
F4HY562.2e-0827.49Homeobox-DDT domain protein RLT1 OS=Arabidopsis thaliana OX=3702 GN=RLT1 PE=1 SV... [more]
Q9FFH12.4e-0729.94Homeobox-DDT domain protein RLT2 OS=Arabidopsis thaliana OX=3702 GN=RLT2 PE=1 SV... [more]
BLAST of Spg004867 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CTC71.8e-4263.51homeobox-DDT domain protein RLT3 isoform X2 OS=Momordica charantia OX=3673 GN=LO... [more]
A0A6J1CRK01.8e-4263.51homeobox-DDT domain protein RLT3 isoform X1 OS=Momordica charantia OX=3673 GN=LO... [more]
W9QMQ03.1e-2648.65Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011346 PE=4 SV=1[more]
A0A2I4G2C37.0e-2647.50homeobox-DDT domain protein RLT3 isoform X3 OS=Juglans regia OX=51240 GN=LOC1090... [more]
A0A6P9ES707.0e-2647.50homeobox-DDT domain protein RLT3 isoform X1 OS=Juglans regia OX=51240 GN=LOC1090... [more]
BLAST of Spg004867 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G12750.16.9e-1842.14Homeodomain-like transcriptional regulator [more]
AT1G28420.11.5e-0927.49homeobox-1 [more]
AT4G03250.14.5e-0925.60Homeodomain-like superfamily protein [more]
AT5G44180.11.7e-0829.94Homeodomain-like transcriptional regulator [more]
AT5G44180.21.7e-0829.94Homeodomain-like transcriptional regulator [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 174..235
e-value: 2.6E-11
score: 53.6
IPR001356Homeobox domainPFAMPF00046Homeodomaincoord: 180..230
e-value: 4.7E-11
score: 42.4
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 181..231
score: 13.377741
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 178..231
e-value: 1.84628E-12
score: 59.9497
NoneNo IPR availableGENE3D1.10.10.60coord: 171..249
e-value: 3.4E-15
score: 57.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..254
NoneNo IPR availablePANTHERPTHR36968:SF8OS07G0619600 PROTEINcoord: 174..323
IPR044977Homeobox-DDT domain protein RLT1/2/3PANTHERPTHR36968HOMEOBOX-DDT DOMAIN PROTEIN RLT2coord: 174..323
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 178..231

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg004867.1Spg004867.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006357 regulation of transcription by RNA polymerase II
molecular_function GO:0003677 DNA binding