Spg004798 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg004798
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold5: 21336435 .. 21337449 (+)
RNA-Seq Expression	Spg004798
Synteny	Spg004798

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAAAAAAGAGGAAGTAAGGAAAGGGATAATGAGGAGGAGCAGGTGCCGATTATTCCTGAGGCACCAAAAACGAAAGCAAAGAAAAAGAAAACACCAGAGGAGAGGGAAGCCAAGAGGCGAAGAAGGCAACAGAGGGTTGAGGATCAAGAGATCGTACAGAAGGTAGTGGAAGATATTGCTGCCGAAGTAGTTGAGGAAGAAAATCCGAAGGAACCTGAAGAACAAAACCCTGGACAGACTGAACCGATAGTCGAAGATACGCAAGAAGTTCAAGAAAAACAGACAGAGGATGCGCAAGAAGAACAGACAGAAGAGGTGTAGGAAAAAGGCAATAAGCAAGAGGCTTAAGTTGAGGTTATTATGCCGGAAGTACCCCGTCGTTGCCGTCAGAAGCAGAAAGCCGGCGAGTCAAGGTGGTCCGGACTGATACTCCTTCGCCGCCGACAACTGATTCAGAGAGAAAATACAGAATGAGAAGAACAGGAGAAAAAAGAGACCGAAGACAAAACAAGAGAGGAAGCAGAGGAAGAAATTTTGCCCAGACAAAGGGAAGACAAGGGCAAAGGTATTGCTGAAGCATCGCCGGAACCTGAAGATAGTGAAACAGAGGAGCCACAGCTGCCGTATAACCGCATCAACAATCTTGCTCGAGCAAAGTATGTCGAGATGCTGAGAAGAGACTTTCTGTTTGAGCGTGGGTTTGGCGATGATCTGCCATGATTCTTGAGGACTGGAATAGCGAACCATGGCTGGAGTCAGTTCTGTGCAAAGCCGGAGCCGGTCAAGTTCCAATGTTGTCTGTGAGTTTTATGCAAATATTGATGATCAAGAAGGATTTCAGGCTATCGTCTGAGGAGTGCCCGTTGACTGGAGCCCGGGAGCTATCAATTCTTTATTCAACCTCCAGGACTTTCCGCACGCAGGCTTCAATGAAATGGTGGTAGCACCATCGAATGATCAGTTAAATGCGACTGTCCGAGAAGTTGGCATCGAGGGGGCTCAGTGGTGA

mRNA sequence

ATGGCAAAAAAAAGAGGAAGTAAGGAAAGGGATAATGAGGAGGAGCAGGTGCCGATTATTCCTGAGGCACCAAAAACGAAAGCAAAGAAAAAGAAAACACCAGAGGAGAGGGAAGCCAAGAGGCGAAGAAGGCAACAGAGGGTTGAGGATCAAGAGATCGTACAGAAGGTAGTGGAAGATATTGCTGCCGAAGTAGTTGAGGAAGAAAATCCGAAGGAACCTGAAGAACAAAACCCTGGACAGACTGAACCGATAGTCGAAGATACGCAAGAAGTTCAAGAAAAACAGACAGAGGATGCGCAAGAAGAACAGACAGAAGAGGAGAAAAAAGAGACCGAAGACAAAACAAGAGAGGAAGCAGAGGAAGAAATTTTGCCCAGACAAAGGGAAGACAAGGGCAAAGGTATTGCTGAAGCATCGCCGGAACCTGAAGATAGTGAAACAGAGGAGCCACAGCTGCCGTATAACCGCATCAACAATCTTGCTCGAGCAAAGACTGGAATAGCGAACCATGGCTGGAGTCAGTTCTGTGCAAAGCCGGAGCCGGTCAAGTTCCAATGTTGTCTCCCGGGAGCTATCAATTCTTTATTCAACCTCCAGGACTTTCCGCACGCAGGCTTCAATGAAATGGTGGTAGCACCATCGAATGATCAGTTAAATGCGACTGTCCGAGAAGTTGGCATCGAGGGGGCTCAGTGGTGA

Coding sequence (CDS)

ATGGCAAAAAAAAGAGGAAGTAAGGAAAGGGATAATGAGGAGGAGCAGGTGCCGATTATTCCTGAGGCACCAAAAACGAAAGCAAAGAAAAAGAAAACACCAGAGGAGAGGGAAGCCAAGAGGCGAAGAAGGCAACAGAGGGTTGAGGATCAAGAGATCGTACAGAAGGTAGTGGAAGATATTGCTGCCGAAGTAGTTGAGGAAGAAAATCCGAAGGAACCTGAAGAACAAAACCCTGGACAGACTGAACCGATAGTCGAAGATACGCAAGAAGTTCAAGAAAAACAGACAGAGGATGCGCAAGAAGAACAGACAGAAGAGGAGAAAAAAGAGACCGAAGACAAAACAAGAGAGGAAGCAGAGGAAGAAATTTTGCCCAGACAAAGGGAAGACAAGGGCAAAGGTATTGCTGAAGCATCGCCGGAACCTGAAGATAGTGAAACAGAGGAGCCACAGCTGCCGTATAACCGCATCAACAATCTTGCTCGAGCAAAGACTGGAATAGCGAACCATGGCTGGAGTCAGTTCTGTGCAAAGCCGGAGCCGGTCAAGTTCCAATGTTGTCTCCCGGGAGCTATCAATTCTTTATTCAACCTCCAGGACTTTCCGCACGCAGGCTTCAATGAAATGGTGGTAGCACCATCGAATGATCAGTTAAATGCGACTGTCCGAGAAGTTGGCATCGAGGGGGCTCAGTGGTGA

Protein sequence

MAKKRGSKERDNEEEQVPIIPEAPKTKAKKKKTPEEREAKRRRRQQRVEDQEIVQKVVEDIAAEVVEEENPKEPEEQNPGQTEPIVEDTQEVQEKQTEDAQEEQTEEEKKETEDKTREEAEEEILPRQREDKGKGIAEASPEPEDSETEEPQLPYNRINNLARAKTGIANHGWSQFCAKPEPVKFQCCLPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNATVREVGIEGAQW

Homology

The following BLAST results are available for this feature:

BLAST of Spg004798 vs.


Match Name	E-value	Identity	Description

BLAST of Spg004798 vs.


Match Name	E-value	Identity	Description

BLAST of Spg004798 vs.


Match Name	E-value	Identity	Description

BLAST of Spg004798 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg004798.1	Spg004798.1	mRNA