Spg004790 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg004790
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF3128 domain-containing protein
Locationscaffold5: 21661229 .. 21671563 (-)
RNA-Seq ExpressionSpg004790
SyntenySpg004790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGGGTCTCAGGTATACACGATCGAGGACTGACATTAAAATGTCAGTCCTCGATCGTGTATACCTGAGACCCTGACATTGAGTTAAAAGGAAAGTGATAAGGGTATCAGGACCTCAAGTATAAATTGTTGAGGACTGATATTGTGATAAGTAATATAGGTGAATATTGGAGCACCTGGGTACAAAAGGCCAGAGATCTATATTTGTTGTAGGTATTTTGGGAATATTGAGGCGCCTGAGTACAAAGGTCAGAGATCAATATTCTCTTATTCAAGTATTGGGGTGTCTGAGTATAAAGGCTAGGATTCAACATGTAAAGATAATTATATAGTCAAAGTATGAACACCGAGGCGTTCGGGTACAAAGGTTGGGGATCAATATTCATATTGGATTGCAACAAATATCGAGGCGCCTAGGTACAAAGGTTAGGGATCGATGTTGCAAGTATATGGGAGATATTGGGGTGCCTGGGTACAAAGGTTACGAGCCAATATTTTTCATATACAGGTATCGGGGTACTTGGGTACAAAGGCCAAGAGTTGATGGATTAGAATGTAGAGCAAGTGAGGCTCTTTTCAGCTTAAAAGTTGTGTTTGAGTGCTTTGCTAGAGTCAGGATTTTGAGTGCAAAGGTTAGGAATCGACTAGTTAACCTATGTTGTGATTGTAGGGCAAGTCCTGTGTTTTATTTGATTACGTATATTGAGCATGTTGCTTGTGTCTTTAGTCTTGAAAAACATGTTAGTTGCGTGTGAGAAGCATGTTGTTTGCTTTGTGTGGTGGCTCACCAGGTGTGAGCTACTTACTAAGTACACATTATGTACCGACTCAGCACCGAGTTTTGCAGGTGATGGAAACCTATTCGAACTTGGTGATGTAGAGGAGGTGAAATGAAAGGACCGTTAGATAATTGTTCTTTTTAGTTGCTTTTCTTTTAATAGTTAAGCTAGTTTGTGGTCTTGACATTGGTACTTTAATATGTTGTTTTTTTTTGTTTGTTGTTGAGCGAAGTTTGTGTTAGATGGAGATGTTTTACATTGGAGCATGATGTTGAAAATTATTAGATTTGTTAGAAGTTCAAGTTGTTCTTAGAGTTTAACTGAGTTGAGTATCCTTTTCTCTACCGTTGTGAACTAAGCTTGATTGTCCCTTTCACAAGAGTTGTGGCTTTTAGTGTTTTTATCATATAGTTGTTGACGCAAGACATGACTCGTTCTTGTGTATTTGGAAGTGCATATATTGTTTTTTTTAGTGTTTAAAATTTTTGGGTAGCTCGTAGTTACGTTGTTATGTTGTCGAAATTTTCGGAGCATTAAGTTGGCATTAGAGTAAAAGTTTAGTAACGTTTCCTTAGGTTGGAAATTCAGGGGAGTTACAGTTATAGATAATGATGGAAAGTTATCCAGTGTTTTTATTAACCATTAACATAGTTTAACCACTACCACAACATCATACTTGTATTATCAATCCAGTTTCAATAGACGTATGTTGATGGGTCCAATTTTATCTGAATATTTTGTAAAAATACTTGTTAATTATACGTTCTGCCAATTTATACCATCCTTATTGTGCTTAAAATTCCTGCACGTTTGTTCTGTGTAATGGATTTTGATTTCTTCCATCTGAACTTTTTAGATAGTTCATACCTTTTGAACTGGGAGACATGGAAGGAGTAGAGAAAATAACACCAGAGAAGGAGGATAACTCCAAGGGATCAAGGGGGCGGTTGTCCTGCACCACCTGCTTTGATTCTCTGTGGTTCTGCTATTGTATGCAACCTTATAATCAACTCAATTATACTGATTTTCATAATTTTATTTGATTTTTTTCTCATATTTGGGTTGTTTGCCGTCATCACGTTGTTTATGATTAAGAGTGTGTGACACTCTTCCTTACGTTTGATTGATCAGTTCCTCAGTATATTAAAATAGACTGAGGAAACCAGACCATGAATACATTTACTTGGCTTTTGCAACTATTAATGGTTTCCAATGGTCAATCTAATCTACTAAAAACTCATCCATCTAATATACTAAAATGGCATTTTTTAGGTTAGCACCAAGTGTTATTTTAAAGAGCTGGCCTTATTATTTGCACACTAGTTATGGATCATTCCTTAAATTGTAATCAATGGATTTCTACTAAACTTACAAATTGAAGATTTTAATGTGCAGTGTCTCTTTACTATTTGGTAACTGGACAGAGGTTTTTAAAGTTCCGTTCAATTAGGGAAGAGGTTTTAAAGAGGTTTGATATCATGTAACATTTTTACCTGAATTGTTTTTATGTTCTTTTGTCTTCCAACACCAACTATTTTGCTCAGGATTAGGTTGAAATTGTTTTCAAATTCTCTGATCCCTTATTCTCCAAACCAATTGTTTAATTTATTTATTTTTTAAAGTTGGCTCAGGATATCTAATACTCATCTTTGCACCTAGTTTTTCCTACTTGTAGAACTCTTTTTCCATATTGATGAGCTCATCTTTCACCTAATTGTTAACTTGTAAATCCAATGGTTCTATTTACTGCAGCTCCAGTTCATCAGATGCAGCAATATTACAGGCTTGGGGTTTTTGATAACTGTTCTGACAAATGGACAACTCTTTTTGACTGTTTAAATCTCAAGACAAAAAGAGCTTCCGAGGTTCAGGTATGTATCTGATACAAAAATACTTGCAGTTGCATATAATCTATATATTTCAAGAATGCTGAAATCTTGTTGTTGATCTTCTTTATTTGGTTCCTTGTTTTTCTCTATCATGACATGTTGAATTTAAAAATTTTCCATTAGCCCTGATCTGTAAATGGTAATTGAGATTTTCAAATGAACATAAAGCCTTATGACACAAATGCCATTTCTAGCTTCTAGGTGTGTCCGGTGTTTTAAAAGGCACATGCCTAGGCACAAGGTGCATGTCATCCCACACGTTAGGTGTGCGCCTTCCTTAAAAGCCCAGGCATTGGCCTTGCGCCTTGGGGATTTTTTATTTATTACAAAAAATATAGTTTTTTACTAACCCTAAACGCAATAAACCTTGCCGTTAGGGTTTTTTCTTCTTGATTAATGAAAAAAAATAGTAGTTACTAACCCTAGACCGAAAACCCCATACGTTTTAGGGTTGTTTTCTTCTATATTAATTAAAAAATAAATAAAATTTACTAACCCTTAGGGTTTTTTCTTCATATTTCAACTTCAACCATTCTTCTTTATGTATTTTTTTATATGTAGTGCGCCATATGAAAAAAAGCCCGTGCCTATTTTGCACCTTGCACCTAAGCTCTAGAAGGCTTAGCCTTAGTGCACCTTGAGCTTTTAAAAAAACACTGGGTGTGTCTCATCAAGTCCTTTGGCTGGTCTACTAGAATTTTTTTTTTTCTTTGCCATGTAACTAGATTTCCTTTGACAAAGGAATAGTAACTAGAGGTAGATCTTCTATCAATAGTACTTCTAGCGTGAACTTCTACTGGGAAGTGATTGTTCTTTTTTAATAAAATATCTTTTCCAAGAGCTCCTTTTAGTATCTTTAGATGCTATAGGTAGCTTCAAAATGAGTCGGTCCAGTGCATGCATAAATTGACTTAGCATGCTTACGACAAAAGCAATATCCGGACACATATGATACAAATGAATAATCCCCCACAAGTCACTTGTATTGTTCTTTATCCTTTATTTCTTTGTTTGTTGCTTGTAATTTCAGATTCAGCTCAATAGGAGTTTCTGCAACTCTATAGCCAAGTGAACTTGTTTCTTCAAGTAAGTCAATGGACATATGTTTTTGGATTAACAAAGATACCTTTCTTTGATCTTGTAAATTCCATCTCTTGGAAATATTTTAATGTTTCCAGTTCCTTGATTTGAGACTCTCACAAGATTTTTCTTGAGATTAGTTAGACCTGCTTCATCATAATCTGCGAGATTAATATCATCTTCCTAGACAATCAAAATTAAGATTATATTATTCTCAGAGTGTTAAAAAATATAGTATGGTCAACTTGACTTTGAAGAAATTCATAACTAGACCTCAAGATCACCATTGAGGAAGACATTTCTCATATCAAGTTGGTGGAGATGCTACTCTGAATTAGCTGCAAAAGACAAAAGGGCTCTAATAAAGTTATTTTTGGCAACAAGAGCAGATTTTTCATGGTAATCAATTTCATAGGTGTTAGTGAAGCCTTTAGTGACTAATCTAGCCCTCTATCTCTTAATACTACCAATGCTTTACGTTTTATGGTGAACGTGCATTTACTTCCCATTGGACCTTTTGGCAACTCTACTATTTCCCAAGTATTATTTTTATTTAGAGCATTCATCTCCTCCATGAGTGCTAATTTTCAATTTGGATCTTCTAAGGCTTCATGTATATTTCTTGGAACAAACAAATCTATTATCGTATATGTGAAAGCTCTATGACTATTTGACAAATTTTGATATGAAATGTAATTTGCAATGGGATATTTGGTACTACTTTGAATACCTTTTCTAAAGGCTATGGGAACATCGAGATCAAGCACAACTGGTAAAGTGGTTTGATAGTTGAAGTAGAAATAAGAAAAGGGTTACCAGATTGCTAAGTTTCATTTTTTGGAGTCTCAAGTTGACTATGTGAAGGAGTAACTACTTGATCTTGGTTCATTTGATTCAATTTCATATTGGTATAAAACTTAGACGCAAGAACATGATCGGTAGAATCATACCACATAGATTGAGAATTTTCTTCGCATCAAAGGGTCAATAAAATCAGAACAAATAGGACTAGTAAAACCAAACCAAAACAAATAGGATTGGGAAGAGGAACAAAAATATCCCAAAAGTTTCTTTTTTTTTTTGAGAAGTAAAATTTATAAACCGGTTACCAAGCTACTTTTCAGTAGTAGTGGCCGAGTCGTCTACTGGGAAGGAGATCTTCTAAAGTTCTAATTAAAATTGGCTTCTTATAGAATAAAGGGCTTAGAGGGAATGAGTTCAATCCATGGTGGGCACCTACCTAGGATATTTAATATCCTACGAGTTTCTTTGGCAACCAAATGTAGTAGGGTCAGACGGTTGTCCCGTGAGATTAGTCGAGGTGCGCGTAAGCTGGCCCGAACACTCACGGATATAAAAAAAAAAAATTGGCTTCTTATAGGAGTCACAAAAAAGGGGGGTTTTGAAGGATGATTTTGTCACAAAAAAAAAAAAGGACAAAAGTAATAAAATCATCGATGAAAATAAATAACATGCAAAATAAACCAGAACAAGAAATCTGGTGAAAATAATCAATAACGAAAGATCATTGGATTCTAGGGGTTCATTGGATTGATTAACTAATTGGTTTCCTCGCTTGCTCTAAAGATAAATTCTACAAAACTATTATGAACTCGGTATGCTTCTTGGTAAATTGGATTCTGCATCCTCCTTACCTGTGTTAATCGATTAACTAACCCGTTAGCCCGCGTGATTAATTAATCAACTATTATTAATTTACGCCCACTACCCCTCATGCCTTAGCTAGCCCACAAATCTAAATTTAACTAACTGAATAGATAACCCGTTAGCCCGCGTGATTATCTATCGAATTAGCCACATTACGTCTAAGGGTCCGAAATTACTAAATTAAATCAAGAAAACAAATTCCTAGACTAATTTAATAATTTCTCCATGCATCCTAGGTTCTATCAAGCAAACTATGCAAGTTCGTATAGAAAAATGCAAAGGAATGATTCAAATCTATTGGCTATCTCAAATAACTAATAGATCGCCTAAGAAAACATTCAAAGACGATGGTTAACACAGGAAAACATGGATGAACACAACGATTCAGTAGAATACAGTAAGAAACAACAAGCTCAAGTTGCTCAACCAAAAATTGCATTAACCAATCCAATTACATCCCAAGAATCCAATGAAAAGATGTTTAAGCTAGCATAATTGAAGAGAATTCAACAACAAACTTAAAGAAATACATTCTAATGAGTTTAAGAATCAAAGGAATACAAAAAGAACAAGAGAAAAACGAGAGAAAATTGAAAACAACGGGAAATTCTAACCTACGACGCTAAAAAACGAAACCTAATATTTATAACACAATCGAAGACACTTATTGGAGAATGAAATCGAGGATTGGACCTCCCTTCTATCATTATTACAGCCATTGATCAACCTATCCAGAGGAGATTCGTGGTCATGGGCTCTCGAAGATAATCGGGCCTTTTCCACCAGCTCACTCTCGAAGCATCTCTCCACCACAAGCCCCAACGTATTATCAGTTTTATATAAGCATATATGGGCTGGTCATTATCCAAAGAAGGTGAAATTCTTCCTCTGGGAGGTTAGCCACTCATGCATCAACACTCAAGACAAGCTCCAACGTAGATCTCCATGGCTGGTTATTTCTCCATCTTGCTGCCCTATGTGCTATGGAGATGCAGAATCCTTGATGCACATTTTCAGCAACTGTCCATATGCTTCTAAGTATTGGAGCTTCCTCCAAGCGGTTTTTGAATGGTCCTTCCCTAGACCGGGTGATATTCTCTCTCTCTTATCTCTTCTTCTCATGGGCCACCCCTTTAAGAATGAAAAGAAGATCCTTTGGCTTTGTCATGTTTGTGCGTTTTTTTGGAGCCTTTGGTTGGAGCGAAATGGTCGTATCTTCTCCGATAAGAAGAAAGACATTGACCACTTTATTGAGACCTCTTCCTTGTTAGCTATCTCTTGGAGTAAATTATCATCTCCTTTTTGTAATTATAGTTTATCTACCCTCTTTAATCAATGGAGGTGTCTTTTGTAATTATATCCAATAGGTCTCTTTTGTATCCCATTTCATAATATCAATGAATGGTCCTTTGTTTCCTATCAAAAAAAAAAAAAATAAAAAAAATAATAATAATAATTACACAGTCGAAGCGTCTCGACACTCTGCTCTCTGCCCACACCTTTTCAAGTAGAATCGAGGTAGCGTCTCGACGCTACGAGTTTCACAGCGTCCTTTGCCTTTGTTTAGTGTTGAGACATTATTGTGACACCGTCTCAACGCTATGCCCTCAGGTTCCTTGACTTGGAGCTTGACTTTTTGACTTCTCTGCACTAGTTCTCAGGGCCATGACTATCCGCTTGGGTCTTTTCACCTCCTCTTCATCCGTGGACTCCAAGATGGTTCAAAAACTCTCTGAATTCCTCGATTTTAATGCCAATTTGTACAATCCACTCTTGAAGCCTTTAATGCTCGAATACCTACAAAATAGACAATTAAACCATAAAAATAACTCTAACAAGCTTAGATTAGCGGTAATAAGATAGCACAAATTAGGTGCTATCAAATACCCCCAACCTAAATCTTGCTCACCCTGAAGAGAATTTTGGGTAAAATATGGTTGATTTCCTGAATATAATACATCCATAACCACATTTTTTTTAATATGAAGATTATAACATTTATAACCCTTTTGATTTGAAGAACCCAAAAAAATACATTTAACAGCTATGGTTTTGACCGGGTTAACATAGGTAATACACCAAAAAACTTTGATAGGTAAATTAGAATACATGCGGGATGTTGGAAAAATATCTTTAAAACACTCAATGAGAGTTTTGAAATTCAAGACCTTACTATGCATCTTGTTTGTTAGGTAGGAGTTGTGAGAACTATTTCCTCCTATAAATATTTTGGAATATGCATGGAAAACATCATAGCATGAACTACTTCAAGTAAATGACTATTTTTTCTTTTAGCAATCCCATTATATTGAAGACTGTCCCAACAAGTATGTTGATGGAAAATACTTTTTTCTTTCAAAAAATCAGCAAAAAGTTAGTTGAAATACTTGGTTCCATTGTAAAATGCAAATTCTAGTTTGAAATTGGGTCTCAATTATAAAAGTGTTTGAAAATGTTTTTCACCTCAATTTTTTTTAATCATTAAATAAATTCAAGATAGATGAGTATGGTCGTCGATGAAGGTATCAAACCATCTTTTTTTCACTATGAATACTAATTTTAGAAGCACTCTAAATGTCATTATAAATTAAATAAAACGGTTTAGAAGCTTTGTAAGAGTTTGGAGATTAGTTGAGGTGTGCGCAAGTTGGCTCAGACACTCACGAATATTAAAAAAAAAGTTTGGAGAATATGTGGAATGATGATTTTTGGCTAAAATACAACTTTCACAATCAAATGAGGAACAATCAACTCAATTAAGTTTGGAAACAAATATTTGAGATGAGAAAAACTAGGATGTTTTAGCTTAAGATGTCAAAACATAATTTGTTCTTTAACTAATACTACTAAGGAGAGGTTCTCTTAATGGATCATTTGGGCTTTACTTTGGTCTATATGGCTCGACAAGAATTTCTGCATTTTCTCAAACGTTAACCAGGATTTTGAATCATTTCATCTATTGTTATTTTTTATGCTCTCACTTGGTGTAAATTGGGTTCACCTTATTGTAATTATATTGATTTAACTCTCTTATCGCCCATTGGGAAAAAAAAATTGTAATCATTTGGATATGTCTCATTTTGTAATTTCATTTATCAATGGAATTTATTGTTTCCTATACAATTAAAAATAAAAAAATAAAAAAAGGAAAACATTCACTTGTTGCTAGAACTCTCATGCCTTCGGTGAGCTTTCTTATTTCGAATCCATTCTTATTCTAGGTAAATCTCTAATGTATTATTCTAATGGTTGATGAGGATAGCTTGGATGTGAATTGGACTTTTGATAATGAGGAGTCTCATTCCAATGGAGATGATAATTTATCAAGTGAAAGTGGGAATTCTTTACCAACAAGGTTGGGTTAGCATGGGATATACTTGAAGCGTGTTCCTCGAGCACACTCTTCTTCCGTAATAGAAACCAAACTCAGAAACCTTTGGAAGAAACAAAATTCCTAATAGTGTTTGGATGAGGGTTTCCGGGCTTGAGGATGACCTAGCTGACTCTCCTCCGAATGAGGTTACCTTTTATCTTGTTACATCTTGGTTTGGTGTTTTCCTCTCTCTTTTGTTGTTTCTTCTAAATCTTTTTGGCATTTGTACAACTTTCTTAGGCCCAAATAGTGCCTAATGGATGGAGAACCCTGGCGGGAGTTTTCTCTTGTGGACCATCTTTGACGATAAATCTCTAATGAGTTCTAGGACGTTCATGTCGCTTCATCAGTTGAAGCACAACCCCAATCAGGTAGAGCACATCCCCTATATTAGCTTCAAGAAGAAACCTCTAATTAAGGGACCCTTGTTGGTTAAGGATTGGAAAAGTTGTTGGTTCCTTGTCAAGGGGAGTTCGATGGCTTTGGATGTGAACATGTTGAATTATGTGGTTTCGACGATATTTAAGGATTATGGTCAGTGCTTTTTTCCTCACTCAATCAGATCGCCTCTTTCTTCTCATGCTAATGTTCTGTTCCTTCCAATTCTGGTTCAGTACCTTTGGATCCAAACACACCCCTATGGTCGTGGCATTTTACTATTAAGTTAGCAAACTTCTAAAAGAGGCAAGTTTCAGCCCCACACTAGTACAACAAGAGATTTTGGTTGCTCATGGCCCCTAATGCTCGGAGTAGAAGACTCAGGTGACACCTTCCCTCTATTTGGATCGACCTTGTCACCTTAGCCTTTACCCTGCTAATTTTTCTTTTTCCTTTTTTTTCTTAGACATGAAGGCTCACATAAATCCCCTCTATGAAAGTCGTCAGAGGCACAATTGGAGGATAGGCTATGAGAGTTGCAACAAGGACTTCAAGCCTAACGGGTCACATTCCCTCATTAGAGGTCAAAATTACCAACCATACAGATGACAAGCCGATCCCTCAAAGGCAATAGCTTATGTTCCGCCCGTCTTCTGGGTGGTCCCTCCTTAATGTGGGGTGATGAAGATCAGCCCTTACCCATCTCCACATTTGACTATGAAAGGTCTCACACATCTTCCCAAGGTGTAGTGCATGTTCCTTAGATCTAAGTGCATCTTTCAAAGAGTTGGTAAGTGAGGTGGCATCGTGGCACCCTAGTGTGGTTGACCCCGATGAAGATGTGTCGCCTACTCCTCAACCAATCGACTATATATTGAAATGCCGCATGGGGTCCGGGTGCCTAGATGTTGAAGTCGACCCCTACGTGTATGTTTATAGGTGCAGCAATGGCATCAAAGTGTTACAATCCCCCAGCCCAGGATGAGGTTAAACCCCACTTAAGTCAGCCATCCATAGCACTGAAGTTCCTTGGCGTTGAGGTCGAGCCTCCAAGTTCTTCTGAACTGATGTGTTTGCTTGGTTGCAAGCACTCCATGGGAGACACCGTCTATTGGGCCAAGCCCGTATCATACTCCCCAAATGGATTCCATGTATTTGGTCCATAG

mRNA sequence

ATGTCAGGGTCTCAGGTGAATATTGGAGCACCTGGGTACAAAAGGCCAGAGATCTATATTTGTTGTAGGTATTTTGGGAATATTGAGGCGCCTGAGTACAAAGGTACAAAGGTTAGGGATCGATGTTGCAAGTATATGGGAGATATTGGGGTGCCTGGGTACAAAGGTTACGAGCCAATATTTTTCATATACAGGTATCGGGGTACTTGGGTACAAAGGCCAAGAGTTGATGGATTAGAATGTAGAGCAAGTGAGGCTCTTTTCAGCTTAAAAGTTGTGTTTGAGTGCTTTGCTAGAGTCAGGATTTTGAGTGCAAAGGTTAGGAATCGACTAGTTAACCTATGTTGTGATTGTAGGGCAAGTCCTGTGTTTTATTTGATTACGTGTGAGCTACTTACTAAGTACACATTATGTACCGACTCAGCACCGAGTTTTGCAGGTGATGGAAACCTATTCGAACTTGGTGATGTAGAGGAGTTCATACCTTTTGAACTGGGAGACATGGAAGGAGTAGAGAAAATAACACCAGAGAAGGAGGATAACTCCAAGGGATCAAGGGGGCGGTTGTCCTGCACCACCTGCTTTGATTCTCTGTGGTTCTGCTATTCTCCAGTTCATCAGATGCAGCAATATTACAGGCTTGGGGTTTTTGATAACTGTTCTGACAAATGGACAACTCTTTTTGACTGTTTAAATCTCAAGACAAAAAGAGCTTCCGAGGTTCAGCCATTGATCAACCTATCCAGAGGAGATTCGTGGTCATGGGCTCTCGAAGATAATCGGGCCTTTTCCACCAGCTCACTCTCGAAGCATCTCTCCACCACAAGCCCCAACGTATTATCAGTTTTATATAAGCATATATGGGCTGGTCATTATCCAAAGAAGGTGAAATTCTTCCTCTGGGAGGTTAGCCACTCATGCATCAACACTCAAGACAAGCTCCAACGTAGATCTCCATGGCTGGTTATTTCTCCATCTTGCTGCCCTATGTGCTATGGAGATGCAGAATCCTTGATGCACATTTTCAGCAACTGTCCATATGCTTCTAAGTATTGGAGCTTCCTCCAAGCGGTTTTTGAATGGTCCTTCCCTAGACCGGGTGATATTCTCTCTCTCTTATCTCTTCTTCTCATGGGCCACCCCTTTAAGAATGAAAAGAAGATCCTTTGGCTTTGTCATGTTTACATTATTGTGACACCGTCTCAACGCTATGCCCTCAGGTTCCTTGACTTGGAGCTTGACTTTTTGACTTCTCTGCACTACTTGGATGTGAATTGGACTTTTGATAATGAGGAGTCTCATTCCAATGGAGATGATAATTTATCAAGTGAAAGTGGGAATTCTTTACCAACAAGGACGTTCATGTCGCTTCATCAGTTGAAGCACAACCCCAATCAGGTAGAGCACATCCCCTATATTAGCTTCAAGAAGAAACCTCTAATTAAGGGACCCTTGTTGGTTAAGGATTGGAAAAGTTGTTGGTTCCTTGTCAAGGGGAGTTCGATGGCTTTGGATGTGAACATGTTGAATTATGTGGTTTCGACGATATTTAAGGATTATGACATGAAGGCTCACATAAATCCCCTCTATGAAAGTCGTCAGAGGCACAATTGGAGGATAGGCTATGAGAGTTGCAACAAGGACTTCAAGCCTAACGGGTCACATTCCCTCATTAGAGGTGCAGCAATGGCATCAAAGTGTTACAATCCCCCAGCCCAGGATGAGGTTAAACCCCACTTAAGTCAGCCATCCATAGCACTGAAGTTCCTTGGCGTTGAGGTCGAGCCTCCAAGTTCTTCTGAACTGATGTGTTTGCTTGGTTGCAAGCACTCCATGGGAGACACCGTCTATTGGGCCAAGCCCGTATCATACTCCCCAAATGGATTCCATGTATTTGGTCCATAG

Coding sequence (CDS)

ATGTCAGGGTCTCAGGTGAATATTGGAGCACCTGGGTACAAAAGGCCAGAGATCTATATTTGTTGTAGGTATTTTGGGAATATTGAGGCGCCTGAGTACAAAGGTACAAAGGTTAGGGATCGATGTTGCAAGTATATGGGAGATATTGGGGTGCCTGGGTACAAAGGTTACGAGCCAATATTTTTCATATACAGGTATCGGGGTACTTGGGTACAAAGGCCAAGAGTTGATGGATTAGAATGTAGAGCAAGTGAGGCTCTTTTCAGCTTAAAAGTTGTGTTTGAGTGCTTTGCTAGAGTCAGGATTTTGAGTGCAAAGGTTAGGAATCGACTAGTTAACCTATGTTGTGATTGTAGGGCAAGTCCTGTGTTTTATTTGATTACGTGTGAGCTACTTACTAAGTACACATTATGTACCGACTCAGCACCGAGTTTTGCAGGTGATGGAAACCTATTCGAACTTGGTGATGTAGAGGAGTTCATACCTTTTGAACTGGGAGACATGGAAGGAGTAGAGAAAATAACACCAGAGAAGGAGGATAACTCCAAGGGATCAAGGGGGCGGTTGTCCTGCACCACCTGCTTTGATTCTCTGTGGTTCTGCTATTCTCCAGTTCATCAGATGCAGCAATATTACAGGCTTGGGGTTTTTGATAACTGTTCTGACAAATGGACAACTCTTTTTGACTGTTTAAATCTCAAGACAAAAAGAGCTTCCGAGGTTCAGCCATTGATCAACCTATCCAGAGGAGATTCGTGGTCATGGGCTCTCGAAGATAATCGGGCCTTTTCCACCAGCTCACTCTCGAAGCATCTCTCCACCACAAGCCCCAACGTATTATCAGTTTTATATAAGCATATATGGGCTGGTCATTATCCAAAGAAGGTGAAATTCTTCCTCTGGGAGGTTAGCCACTCATGCATCAACACTCAAGACAAGCTCCAACGTAGATCTCCATGGCTGGTTATTTCTCCATCTTGCTGCCCTATGTGCTATGGAGATGCAGAATCCTTGATGCACATTTTCAGCAACTGTCCATATGCTTCTAAGTATTGGAGCTTCCTCCAAGCGGTTTTTGAATGGTCCTTCCCTAGACCGGGTGATATTCTCTCTCTCTTATCTCTTCTTCTCATGGGCCACCCCTTTAAGAATGAAAAGAAGATCCTTTGGCTTTGTCATGTTTACATTATTGTGACACCGTCTCAACGCTATGCCCTCAGGTTCCTTGACTTGGAGCTTGACTTTTTGACTTCTCTGCACTACTTGGATGTGAATTGGACTTTTGATAATGAGGAGTCTCATTCCAATGGAGATGATAATTTATCAAGTGAAAGTGGGAATTCTTTACCAACAAGGACGTTCATGTCGCTTCATCAGTTGAAGCACAACCCCAATCAGGTAGAGCACATCCCCTATATTAGCTTCAAGAAGAAACCTCTAATTAAGGGACCCTTGTTGGTTAAGGATTGGAAAAGTTGTTGGTTCCTTGTCAAGGGGAGTTCGATGGCTTTGGATGTGAACATGTTGAATTATGTGGTTTCGACGATATTTAAGGATTATGACATGAAGGCTCACATAAATCCCCTCTATGAAAGTCGTCAGAGGCACAATTGGAGGATAGGCTATGAGAGTTGCAACAAGGACTTCAAGCCTAACGGGTCACATTCCCTCATTAGAGGTGCAGCAATGGCATCAAAGTGTTACAATCCCCCAGCCCAGGATGAGGTTAAACCCCACTTAAGTCAGCCATCCATAGCACTGAAGTTCCTTGGCGTTGAGGTCGAGCCTCCAAGTTCTTCTGAACTGATGTGTTTGCTTGGTTGCAAGCACTCCATGGGAGACACCGTCTATTGGGCCAAGCCCGTATCATACTCCCCAAATGGATTCCATGTATTTGGTCCATAG

Protein sequence

MSGSQVNIGAPGYKRPEIYICCRYFGNIEAPEYKGTKVRDRCCKYMGDIGVPGYKGYEPIFFIYRYRGTWVQRPRVDGLECRASEALFSLKVVFECFARVRILSAKVRNRLVNLCCDCRASPVFYLITCELLTKYTLCTDSAPSFAGDGNLFELGDVEEFIPFELGDMEGVEKITPEKEDNSKGSRGRLSCTTCFDSLWFCYSPVHQMQQYYRLGVFDNCSDKWTTLFDCLNLKTKRASEVQPLINLSRGDSWSWALEDNRAFSTSSLSKHLSTTSPNVLSVLYKHIWAGHYPKKVKFFLWEVSHSCINTQDKLQRRSPWLVISPSCCPMCYGDAESLMHIFSNCPYASKYWSFLQAVFEWSFPRPGDILSLLSLLLMGHPFKNEKKILWLCHVYIIVTPSQRYALRFLDLELDFLTSLHYLDVNWTFDNEESHSNGDDNLSSESGNSLPTRTFMSLHQLKHNPNQVEHIPYISFKKKPLIKGPLLVKDWKSCWFLVKGSSMALDVNMLNYVVSTIFKDYDMKAHINPLYESRQRHNWRIGYESCNKDFKPNGSHSLIRGAAMASKCYNPPAQDEVKPHLSQPSIALKFLGVEVEPPSSSELMCLLGCKHSMGDTVYWAKPVSYSPNGFHVFGP
Homology
[Close]
BLAST of Spg004790 vs. NCBI nr
Match: KAE8652796.1 (hypothetical protein Csa_022703 [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 9.8e-35
Identity = 73/115 (63.48%), Postives = 88/115 (76.52%), Query Frame = 0 

Query: 161 IPFELGDMEGVEKITPEKEDNSKGSRGRLSCTTCFDSLWFCYSPVHQMQQYYRLGVFDNC 220
           +PFELGDMEGVE ITPEK++N+ GSR RLSCTTCFD+LWFCYSPVHQMQQYYR+GVFDNC
Sbjct: 109 LPFELGDMEGVESITPEKQNNTLGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNC 168

Query: 221 SDKWTTLFDCLNLKTKRASEVQPLI---NLSRGDSWSWALEDNRAFSTSSLSKHL 273
           S+KWT L DCL LKTKRASEVQ ++     ++   W++   +  +     L  HL
Sbjct: 169 SNKWTALVDCLTLKTKRASEVQEILESREKAKSHIWTFRTPEEASSHWKELFGHL 223

[Close]
BLAST of Spg004790 vs. NCBI nr
Match: XP_038875103.1 (uncharacterized protein LOC120067633, partial [Benincasa hispida])

HSP 1 Score: 157.1 bits (396), Expect = 4.9e-34
Identity = 73/112 (65.18%), Postives = 85/112 (75.89%), Query Frame = 0 

Query: 164 ELGDMEGVEKITPEKEDNSKGSRGRLSCTTCFDSLWFCYSPVHQMQQYYRLGVFDNCSDK 223
           +LGDMEGVE ITPEK++NS GSR RLSCTTCFD+LWFCYSPVHQMQQYYRLGVFDNCSDK
Sbjct: 115 KLGDMEGVENITPEKQNNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGVFDNCSDK 174

Query: 224 WTTLFDCLNLKTKRASEVQPLI---NLSRGDSWSWALEDNRAFSTSSLSKHL 273
           WT L DCLNLKTKR SEVQ ++     ++   W++   +  +     L  HL
Sbjct: 175 WTALVDCLNLKTKRTSEVQEILESREKAKSHIWTFRTPEEASSHWKELFGHL 226

[Close]
BLAST of Spg004790 vs. NCBI nr
Match: XP_022964668.1 (uncharacterized protein LOC111464679 [Cucurbita moschata] >XP_022964669.1 uncharacterized protein LOC111464679 [Cucurbita moschata] >XP_022964670.1 uncharacterized protein LOC111464679 [Cucurbita moschata] >XP_022964671.1 uncharacterized protein LOC111464679 [Cucurbita moschata] >KAG7019308.1 hypothetical protein SDJN02_18268, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 155.2 bits (391), Expect = 1.9e-33
Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 0 

Query: 168 MEGVEKITPEKEDNSKGSRGRLSCTTCFDSLWFCYSPVHQMQQYYRLGVFDNCSDKWTTL 227
           MEGVEKITPEK+DNS GSR RLSCTTCFD+LWFCYSPVHQMQQYYRLG FDNCSDKWT+L
Sbjct: 1   MEGVEKITPEKQDNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSL 60

Query: 228 FDCLNLKTKRASEVQPLI 246
            DCLNLKTKRASEVQ ++
Sbjct: 61  IDCLNLKTKRASEVQEIL 78

[Close]
BLAST of Spg004790 vs. NCBI nr
Match: XP_022970353.1 (uncharacterized protein LOC111469344 [Cucurbita maxima] >XP_022970354.1 uncharacterized protein LOC111469344 [Cucurbita maxima] >XP_022970355.1 uncharacterized protein LOC111469344 [Cucurbita maxima] >XP_022970356.1 uncharacterized protein LOC111469344 [Cucurbita maxima])

HSP 1 Score: 155.2 bits (391), Expect = 1.9e-33
Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 0 

Query: 168 MEGVEKITPEKEDNSKGSRGRLSCTTCFDSLWFCYSPVHQMQQYYRLGVFDNCSDKWTTL 227
           MEGVEKITPEK+DNS GSR RLSCTTCFD+LWFCYSPVHQMQQYYRLG FDNCSDKWT+L
Sbjct: 1   MEGVEKITPEKQDNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSL 60

Query: 228 FDCLNLKTKRASEVQPLI 246
            DCLNLKTKRASEVQ ++
Sbjct: 61  LDCLNLKTKRASEVQEIL 78

[Close]
BLAST of Spg004790 vs. NCBI nr
Match: XP_023519221.1 (uncharacterized protein LOC111782657 [Cucurbita pepo subsp. pepo] >XP_023519222.1 uncharacterized protein LOC111782657 [Cucurbita pepo subsp. pepo] >XP_023519223.1 uncharacterized protein LOC111782657 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 154.1 bits (388), Expect = 4.1e-33
Identity = 70/89 (78.65%), Postives = 77/89 (86.52%), Query Frame = 0 

Query: 168 MEGVEKITPEKEDNSKGSRGRLSCTTCFDSLWFCYSPVHQMQQYYRLGVFDNCSDKWTTL 227
           MEGVEKITPEK+DNS GSR +LSCTTCFD+LWFCYSPVHQMQQYYRLG FDNCSDKWT+L
Sbjct: 1   MEGVEKITPEKQDNSMGSRRQLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSL 60

Query: 228 FDCLNLKTKRASEVQPLI-NLSRGDSWSW 256
            DCLNLKTKRASEVQ ++ +  R  S  W
Sbjct: 61  LDCLNLKTKRASEVQEILESRERAKSHIW 89

[Close]
BLAST of Spg004790 vs. ExPASy TrEMBL
Match: A0A6J1I2M7 (uncharacterized protein LOC111469344 OS=Cucurbita maxima OX=3661 GN=LOC111469344 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 9.0e-34
Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 0 

Query: 168 MEGVEKITPEKEDNSKGSRGRLSCTTCFDSLWFCYSPVHQMQQYYRLGVFDNCSDKWTTL 227
           MEGVEKITPEK+DNS GSR RLSCTTCFD+LWFCYSPVHQMQQYYRLG FDNCSDKWT+L
Sbjct: 1   MEGVEKITPEKQDNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSL 60

Query: 228 FDCLNLKTKRASEVQPLI 246
            DCLNLKTKRASEVQ ++
Sbjct: 61  LDCLNLKTKRASEVQEIL 78

[Close]
BLAST of Spg004790 vs. ExPASy TrEMBL
Match: A0A6J1HJL4 (uncharacterized protein LOC111464679 OS=Cucurbita moschata OX=3662 GN=LOC111464679 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 9.0e-34
Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 0 

Query: 168 MEGVEKITPEKEDNSKGSRGRLSCTTCFDSLWFCYSPVHQMQQYYRLGVFDNCSDKWTTL 227
           MEGVEKITPEK+DNS GSR RLSCTTCFD+LWFCYSPVHQMQQYYRLG FDNCSDKWT+L
Sbjct: 1   MEGVEKITPEKQDNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSL 60

Query: 228 FDCLNLKTKRASEVQPLI 246
            DCLNLKTKRASEVQ ++
Sbjct: 61  IDCLNLKTKRASEVQEIL 78

[Close]
BLAST of Spg004790 vs. ExPASy TrEMBL
Match: A0A6J1DHI6 (uncharacterized protein C227.17c OS=Momordica charantia OX=3673 GN=LOC111020523 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 8.4e-32
Identity = 69/108 (63.89%), Postives = 80/108 (74.07%), Query Frame = 0 

Query: 168 MEGVEKITPEKEDNSKGSRGRLSCTTCFDSLWFCYSPVHQMQQYYRLGVFDNCSDKWTTL 227
           ME VEK+TPEKED   G RGRLSCTTCFD+LWFCYSPVHQMQQYYRLGVFDNCSDKWT L
Sbjct: 1   MEXVEKLTPEKEDKPTGLRGRLSCTTCFDALWFCYSPVHQMQQYYRLGVFDNCSDKWTAL 60

Query: 228 FDCLNLKTKRASEVQPLI---NLSRGDSWSWALEDNRAFSTSSLSKHL 273
            DCL+LKTKRASEVQ ++     ++   W++   +  +     L  HL
Sbjct: 61  VDCLSLKTKRASEVQEILESREKAKSHIWTFRTPEESSSHWKQLFGHL 108

[Close]
BLAST of Spg004790 vs. ExPASy TrEMBL
Match: A0A0A0LSX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G145950 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.1e-31
Identity = 67/108 (62.04%), Postives = 81/108 (75.00%), Query Frame = 0 

Query: 168 MEGVEKITPEKEDNSKGSRGRLSCTTCFDSLWFCYSPVHQMQQYYRLGVFDNCSDKWTTL 227
           MEGVE ITPEK++N+ GSR RLSCTTCFD+LWFCYSPVHQMQQYYR+GVFDNCS+KWT L
Sbjct: 1   MEGVESITPEKQNNTLGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL 60

Query: 228 FDCLNLKTKRASEVQPLI---NLSRGDSWSWALEDNRAFSTSSLSKHL 273
            DCL LKTKRASEVQ ++     ++   W++   +  +     L  HL
Sbjct: 61  VDCLTLKTKRASEVQEILESREKAKSHIWTFRTPEEASSHWKELFGHL 108

[Close]
BLAST of Spg004790 vs. ExPASy TrEMBL
Match: A0A1S3CG12 (uncharacterized protein LOC103500495 OS=Cucumis melo OX=3656 GN=LOC103500495 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.5e-30
Identity = 66/108 (61.11%), Postives = 79/108 (73.15%), Query Frame = 0 

Query: 168 MEGVEKITPEKEDNSKGSRGRLSCTTCFDSLWFCYSPVHQMQQYYRLGVFDNCSDKWTTL 227
           MEGVE IT EK++NS G + RLSCTTCFD+LWFCYSPVHQMQQYYR+GVFDNCS KWT L
Sbjct: 1   MEGVENITTEKQNNSMGPKRRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSSKWTAL 60

Query: 228 FDCLNLKTKRASEVQPLI---NLSRGDSWSWALEDNRAFSTSSLSKHL 273
            DCLNLKTKRASEVQ ++     ++   W++   +  +     L  HL
Sbjct: 61  LDCLNLKTKRASEVQEILESREKAKSHIWTFRTPEEASSHWKELFGHL 108

[Close]
BLAST of Spg004790 vs. TAIR 10
Match: AT4G25315.2 (Expressed protein )

HSP 1 Score: 100.1 bits (248), Expect = 6.6e-21
Identity = 43/72 (59.72%), Postives = 58/72 (80.56%), Query Frame = 0 

Query: 174 ITPEKEDNSKGSRGRLSCTTCFDSLWFCYSPVHQMQQYYRLGVFDNCSDKWTTLFDCLNL 233
           ++ E ED+S   R R+SCT CFD+LWFCYSP +QMQQYYR+G  D+C+ K++ LFDCL+L
Sbjct: 1   MSSENEDSS-SVRRRVSCTKCFDALWFCYSPFYQMQQYYRVGKLDDCTKKFSDLFDCLSL 60

Query: 234 KTKRASEVQPLI 246
           KTKRASE + ++
Sbjct: 61  KTKRASEAERIL 71

[Close]
BLAST of Spg004790 vs. TAIR 10
Match: AT4G25315.1 (Expressed protein )

HSP 1 Score: 87.4 bits (215), Expect = 4.4e-17
Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 0 

Query: 174 ITPEKEDNSKGSRGRLSCTTCFDSLWFCY-------------------SPVHQMQQYYRL 233
           ++ E ED+S   R R+SCT CFD+LWFCY                   +P +QMQQYYR+
Sbjct: 1   MSSENEDSS-SVRRRVSCTKCFDALWFCYWMSRWSNITSNGDDTGNDLAPFYQMQQYYRV 60

Query: 234 GVFDNCSDKWTTLFDCLNLKTKRASEVQPLI 246
           G  D+C+ K++ LFDCL+LKTKRASE + ++
Sbjct: 61  GKLDDCTKKFSDLFDCLSLKTKRASEAERIL 90

The following BLAST results are available for this feature:
BLAST of Spg004790 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652796.19.8e-3563.48hypothetical protein Csa_022703 [Cucumis sativus][more]
XP_038875103.14.9e-3465.18uncharacterized protein LOC120067633, partial [Benincasa hispida][more]
XP_022964668.11.9e-3387.18uncharacterized protein LOC111464679 [Cucurbita moschata] >XP_022964669.1 unchar... [more]
XP_022970353.11.9e-3387.18uncharacterized protein LOC111469344 [Cucurbita maxima] >XP_022970354.1 uncharac... [more]
XP_023519221.14.1e-3378.65uncharacterized protein LOC111782657 [Cucurbita pepo subsp. pepo] >XP_023519222.... [more]
BLAST of Spg004790 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg004790 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I2M79.0e-3487.18uncharacterized protein LOC111469344 OS=Cucurbita maxima OX=3661 GN=LOC111469344... [more]
A0A6J1HJL49.0e-3487.18uncharacterized protein LOC111464679 OS=Cucurbita moschata OX=3662 GN=LOC1114646... [more]
A0A6J1DHI68.4e-3263.89uncharacterized protein C227.17c OS=Momordica charantia OX=3673 GN=LOC111020523 ... [more]
A0A0A0LSX67.1e-3162.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G145950 PE=4 SV=1[more]
A0A1S3CG123.5e-3061.11uncharacterized protein LOC103500495 OS=Cucumis melo OX=3656 GN=LOC103500495 PE=... [more]
BLAST of Spg004790 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G25315.26.6e-2159.72Expressed protein [more]
AT4G25315.14.4e-1746.15Expressed protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 263..352
e-value: 2.2E-15
score: 57.1
IPR021475Protein of unknown function DUF3128PFAMPF11326DUF3128coord: 188..247
e-value: 1.8E-23
score: 82.7
IPR021475Protein of unknown function DUF3128PANTHERPTHR28052UPF0545 PROTEIN C22ORF39coord: 178..245

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg004790.1Spg004790.1mRNA