Spg004683 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTCATTGTGGTTTCATTGTTGGATTAAAGTTGTTGGAATTTATTAATTTGAAAGAAGGAAGAAAAGAAAGGAAATAAAGGGAAACAAACAAGAAAAAGAAAATAAAAGAAAATAGGAAAATGAAAAACAAAAAAAAAAGGGAAAGGTTGTCGGTTGCTAGTGGTCTTAAGTAGATAATCCACCACCGTTTCAGTCATTTCAGCCCATTTTTCCCATCATTTTCCACAAAACTTCAGAGCATTTCGAGGGAGAGAGTGAAGGAAGAAGAAGAAAAAGCTTGCTAGGGTTTTGAGGTTGAAGAAGAGAGCAAATAGCTGAAGCAAAACCAACCATGGCAGAATCTGGGTTCAACCTGCCTATCTCTGGTTTTTTATTCGGTTTGAGCTACACAAGAAGAACTAAGAGGTGAGGCCTGGCTTTCTTGAAATTTAATCCATTTTCTAAAAAATTGCATGAAGAAAGCTTGAGCTAAATCTGATGTTAAGTTAATGGTTTTTGAAAAGGAAAACAGAGCACAGAATTTTCGTGCAAATCAGGAGGATCTTTGGTTTTCTCTGGTTTTTCGAGCATTTTGGGTACAGGTTGAATTAGACGCTCCGTTTTGTATGGTTGGAAAGCTTATTCAATTTTCTATAACTGTAATGAATAATTCGTGAGCCACAAATGACTAGAAGTAAGTTTAATTTCAGGAGAAAGGTAGAGGGTAGCAGAGAAGCACGAATCTGTATTTGCTGTGTTCGGGGGATTTCTGGACAAATCCGTTTTGAATCTCGTTTTCATTTCTTCAGGTAACGTTTAGAGGATTCCAAAACGAAGAGTTTTATATATATTACATTAATTTTGGTTAAGTATTGAGGAAGTTATGAGTGTTGGAAGTTAGGGTATTGAATCTGGAAAATCTAGAAAAAAGTGTGAAGTGTGATTTTATTTCTAGAAATTAGAATTCATGAGCATGGAAAGAAAAGACGATTTATAGTTCTGACGCTCGGTTTTGGTTTGTTTGACAGGCCAAGGGGAAATAGGCCGAGTCTACAGACCAGGGAACTAGCCAAGACTGTGAGTGACAAAATAAATTTCGAAAATGATTTCTAAACGGTTATTTATGCTTAAACGGTTTACATGCTTGAATCTGAACTTATGATTGATACATGTTTTCTATGAATGGTTTCAAGCATAAGTTTTGAGCTTAGATTTTCTAATGAAATTTATATGTGAGCACGTGATTATTGATTTTCTGAAAAGTAGTTGAAACGATATCATTTTAAGCAAAGTATGTATTAGCAAGTACTGTTTAAAGATTTTCAGTTTTCCACGAGCAAGCTGAGTAAGCTTGAGTTTTACGAAAGATAAAGATAAGCATGCATGTTTTAATGTTTACATGTGATTTTCTGAGACTTTTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACATTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGTTGGGCGAGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCAGGCCCCACTACATCGTAGAGATAGTAAACGTTGGTTGTACTGGGTGTGCCCTACACAACGTAGATCGATCATGTTAGTTAAAACGTTTGATAAACTTGATATGCCTTGCTAGATTTTAATGACGTACTTGCGGAGTATTTGAGAAAGCTTTTATCATTACAAGTTTATGTTTAATGCTTTGATTGAACTAATTTATACGTTTAAAGGTTTATCACGTGTTCTGATTTGCGGATTTACAGTTTTAGATTTAGTCACTCAATGGGCTTCGTAGCTCACTTTTTCAAAATGTTTTCCCACTTTTCAGGTAGAGATCGAGCTCCTGGTGCCTGATACACTGCCAACGTTTGCTGAAAGCTCCAAGTCGACTTCCAGTACGTGGGTGGTGTTGTACATTGAGTCTTTTTGTATTATAAGTGTCTTTGTAAGAAGTGGATATGTTTTTTGTTGTAATAGCTCTATCAGGTTTATTCTCCAAACTGAGTTATGTCAGGGCTGCACTTCCTGTATGTCTAAAGGTTTCCAAGGTTCCGCTGTGTTGTGTTGCATATGTAAAGTACTCCATATCTAAGATAGCATGTTTATCAGGTTCAATGGTTCAGCAGGGTCAACAGGTATCATTAGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTCTCGGACTAAGCTAGCAGGTAGTTCGGGAGGGGGTGTGAAAGTTTTACCCCTATAGCACTTCTTGTTCCTTAAGCTCCCACTGAGTTCCTAATGAACAATTGGTTTATGGTCTGACCACTATACCTAAAACCTCTTGGGCGAATGAGAGGGCGGCACGCCTTTGTTCACGTCCCGGAGTCAAACATGCAACAAAACGGGAACGAAATAAAACTCAATTCAGACAAGGATCATTGGATTGGGGTGCTATGCTTGAATGTTTTATTACTTGGCTTCCTAGTTTTCTCTAAAAATCATTTCATGCAATTAATATGAACTCGATATAGCTTCTCGGTTACTCGGAGGATCCCCCTATGTTGCCAACCGTAAGTGCACGGGCCGCAAGTAATATAAAACGAAAATATTCCGAGTATCGAATCCACAGGGAGGTGAAGCGAAAATTAAGCAAGGCAATAAATTCTTGATCACTAAAAATACTTGGAGGAAATAATATTTAGGGACCAAAACATGAAGTAAAAGGAATTTAAAATTAAAGCAATTAAAGATTAAAATTTTGATCAATCAAGGAAAAATAAAATATGGAGAAAGAGTTTTTAGTGAGAAGCAGGGTCTTGAAAATCAATTAATAGCTAAATAATTATTACAATTAACCTATCTCATTGCCCAACTAATTATACTCCTAGAATCTCCGTTAATCACATAGGATCTCCTGTCGGTTTTCCCTAATTCTAATTAATCCAATTTAACAACCTAAGTGTCCTTAGCGCCATTAAAATTCGTTAATTATTACGCTCTGATTCATTTTAGGAATCTAAGTTTAATCAACTAATCCAGTTGTCACGACGGGCAATTAAACTATGTGCATGGATTATGATCTATCCTAATTTCTCTCCGTCGAGTTTCCATTAATAATCGGTTCAATATACAACTGGCCAGATTGCATACAGCATTACGAGCATCCATACAAATGATTAGTAAAAGAGGGCAAGAGAAAGGCAATTATAATAACATTTAACTATATATTTTCATTTCAAGACCCCAAATTGGGGTTTAGCTATACATGGCTAAAATATCCACAAAATATACAAGCATAAATGTGAGCAAAATAAAAGGAAAGGAAATGACCATCGAAGACCCCGTCGCTAGCGCTTGGAGTCCCTCCGAGCACGCCTTGAGCCTCCTAGAGTGCTCCCCAAAGCTCTCCAAAATTTTCCCACTAAGAGCTCTCAAAAAGGCTAAAAAGCCTTGAGAGAAGGCTCAAAAAGAGCCAAGGAAGGGAAGGAAGGAAAGGATATGGAATGATTGATGATGAAAATGGGCACCAAGGGGCGCCTTATATAGGCCCGGAAATAGGACAGCGTCGCGACGCTATCGGCACAGCATCGTGA ATGGCAGAATCTGGGTTCAACCTGCCTATCTCTGGTTTTTTATTCGGTTTGAGCTACACAAGAAGAACTAAGAGGAGAAAGGTAGAGGGTAGCAGAGAAGCACGAATCTGTATTTGCTGTGTTCGGGGGATTTCTGGACAAATCCGTTTTGAATCTCGTTTTCATTTCTTCAGGCCAAGGGGAAATAGGCCGAGTCTACAGACCAGGGAACTAGCCAAGACTGTAGAGATCGAGCTCCTGGTGCCTGATACACTGCCAACGTTTGCTGAAAGCTCCAAGTCGACTTCCAGTTTATTCTCCAAACTGAGTTATGTCAGGGCTGCACTTCCTGTATGTCTAAAGGTTTCCAAGGTTCCGCTGTGTTGTGTTGCATATGTAAAGTACTCCATATCTAAGATAGCATGTTTATCAGGTTCAATGGTTCAGCAGGGTCAACAGGTATCATTAGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTCTCGGACTAAGCTAGCAGAGCTCTCAAAAAGGCTAAAAAGCCTTGAGAGAAGGCTCAAAAAGAGCCAAGGAAGGGAAGGAAGGAAAGGATATGGAATGATTGATGATGAAAATGGGCACCAAGGGGCGCCTTATATAGGCCCGGAAATAGGACAGCGTCGCGACGCTATCGGCACAGCATCGTGA ATGGCAGAATCTGGGTTCAACCTGCCTATCTCTGGTTTTTTATTCGGTTTGAGCTACACAAGAAGAACTAAGAGGAGAAAGGTAGAGGGTAGCAGAGAAGCACGAATCTGTATTTGCTGTGTTCGGGGGATTTCTGGACAAATCCGTTTTGAATCTCGTTTTCATTTCTTCAGGCCAAGGGGAAATAGGCCGAGTCTACAGACCAGGGAACTAGCCAAGACTGTAGAGATCGAGCTCCTGGTGCCTGATACACTGCCAACGTTTGCTGAAAGCTCCAAGTCGACTTCCAGTTTATTCTCCAAACTGAGTTATGTCAGGGCTGCACTTCCTGTATGTCTAAAGGTTTCCAAGGTTCCGCTGTGTTGTGTTGCATATGTAAAGTACTCCATATCTAAGATAGCATGTTTATCAGGTTCAATGGTTCAGCAGGGTCAACAGGTATCATTAGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTCTCGGACTAAGCTAGCAGAGCTCTCAAAAAGGCTAAAAAGCCTTGAGAGAAGGCTCAAAAAGAGCCAAGGAAGGGAAGGAAGGAAAGGATATGGAATGATTGATGATGAAAATGGGCACCAAGGGGCGCCTTATATAGGCCCGGAAATAGGACAGCGTCGCGACGCTATCGGCACAGCATCGTGA MAESGFNLPISGFLFGLSYTRRTKRRKVEGSREARICICCVRGISGQIRFESRFHFFRPRGNRPSLQTRELAKTVEIELLVPDTLPTFAESSKSTSSLFSKLSYVRAALPVCLKVSKVPLCCVAYVKYSISKIACLSGSMVQQGQQVSLEEDDVCWLHAISRTKLAELSKRLKSLERRLKKSQGREGRKGYGMIDDENGHQGAPYIGPEIGQRRDAIGTAS Homology
BLAST of Spg004683 vs. NCBI nr
Match: KAA0052218.1 (uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK01785.1 uncharacterized protein E5676_scaffold113G00130 [Cucumis melo var. makuwa]) HSP 1 Score: 74.3 bits (181), Expect = 1.4e-09 Identity = 61/168 (36.31%), Postives = 79/168 (47.02%), Query Frame = 0
BLAST of Spg004683 vs. NCBI nr
Match: KAA0041121.1 (hypothetical protein E6C27_scaffold128G00290 [Cucumis melo var. makuwa]) HSP 1 Score: 67.4 bits (163), Expect = 1.8e-07 Identity = 68/201 (33.83%), Postives = 77/201 (38.31%), Query Frame = 0
BLAST of Spg004683 vs. NCBI nr
Match: KAA0054353.1 (uncharacterized protein E6C27_scaffold24G00800 [Cucumis melo var. makuwa] >TYK12390.1 uncharacterized protein E5676_scaffold302G001720 [Cucumis melo var. makuwa]) HSP 1 Score: 65.9 bits (159), Expect = 5.1e-07 Identity = 62/184 (33.70%), Postives = 74/184 (40.22%), Query Frame = 0
BLAST of Spg004683 vs. NCBI nr
Match: KAA0066795.1 (uncharacterized protein E6C27_scaffold271G001440 [Cucumis melo var. makuwa] >TYK27942.1 uncharacterized protein E5676_scaffold384G001370 [Cucumis melo var. makuwa]) HSP 1 Score: 64.7 bits (156), Expect = 1.1e-06 Identity = 41/91 (45.05%), Postives = 50/91 (54.95%), Query Frame = 0
BLAST of Spg004683 vs. NCBI nr
Match: KAA0040420.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 63.2 bits (152), Expect = 3.3e-06 Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = 0
BLAST of Spg004683 vs. ExPASy TrEMBL
Match: A0A5A7UAH6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00130 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 7.0e-10 Identity = 61/168 (36.31%), Postives = 79/168 (47.02%), Query Frame = 0
BLAST of Spg004683 vs. ExPASy TrEMBL
Match: A0A5A7THH5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00290 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 8.6e-08 Identity = 68/201 (33.83%), Postives = 77/201 (38.31%), Query Frame = 0
BLAST of Spg004683 vs. ExPASy TrEMBL
Match: A0A5D3DWP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001370 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 5.6e-07 Identity = 41/91 (45.05%), Postives = 50/91 (54.95%), Query Frame = 0
BLAST of Spg004683 vs. ExPASy TrEMBL
Match: A0A5A7TAS6 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold35G00450 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.6e-06 Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = 0
BLAST of Spg004683 vs. ExPASy TrEMBL
Match: A0A5D3BET3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00070 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 4.7e-06 Identity = 45/104 (43.27%), Postives = 58/104 (55.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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