Spg004567 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg004567
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold9: 10361641 .. 10369252 (+)
RNA-Seq Expression	Spg004567
Synteny	Spg004567

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAACCACCCGAGTCAAGTGCCGACGACGATCCTTTCTCCTAATTGCTGGCAGCTCAAGACCGATGCATCCTGGAACGAGATGCTTGGTAGAGGAAGTGTAGGATGGGTGGTGCATGACTCGGAGGGATCCCTTGTCTGCGTCGGAATGAAGCAAATCAGGAAATTCTGGTCAATTAAGACGCTGGAAGTGAAAGCCATTCTAGAGGGATTACATCAAATTTCGGATACCTGTAAAAACAGATCAATCGCCGTTGATGTCCTAACGGACGCCATTGAAATCGTCAACATCCTCACTGGTAGAGTGGAGGATCTCTCGGAGGTGAAAGCGATCACCGACCAAATCAGCGTCTTAGCCTCGTCGTTGTCGGGCGTGGGTTTTAGCCATTATAACAGGGTTTTGAACACAGACGAGCACTGTGTTGCGAGAGCAGCCGTGTAGTTTACTGCCGACGATGGTGACCTCCATGGAAGTAGCTCCTCGCGGGAATGGGGACAATTCTTTTGGGCTCCCTCTTTGCCTAGTTGGTTAATTTCCCTCTTAAAGGAGGGTAGGTGTAAAGACTTCAATAGTTATTTCCACAATTGAGAGTTAAACTTTAATATTGTGAAATTCAAATTTCACTCATTGAAACATATATTGTATACATGCACATATATTTTGTAGACGTAGAATTAATCAAATAATAAAATATGCAATGACAAAAATTTAATACAAGTGAACAAAATAATTATCTTTTATAATTTTATTTGTTATATGATATATACGTGTGAAATATTGGATATGGATAGTGTTATAGGTAATTTTGGACCACCCCGATGTACAAGGAGCTGACGAGGACAACCGGGCAGAAATCGGACTGGAGGATGAACCCCGGGGGCGAAACGGGCCAGTGGGTCAGGCCAAGACCGAAGGGGTCGGGCTCCTGCTCGGCTCGCCTGCGCGGGTCGAGCCCGTCTGGCTCCGTATGGTCCCTACCGCCTCTGGCCACCCCGGTTCCGTCTGGTTTGTCCCGAAACGCCTCCGAATACCTAAAAACCCTAGGAGCATGAGCAGGTATTTATACCCCTCTTCGCCACTGAAGAGAGGATCCTGAACTCTAATCTGAACTAAAGACCCGAACTCTCGACTCTCTCCTCTTACTCTCTTGCTCTCCTCTTTCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCATGTTTACTCTTTTGCAGGCCACGTCTTCCCCCGTTCTCAAACAACTTCACTGTCGATTATCATGTGGAGCGAAGGTAATTTACCTAGCAAAATTTGATCATCAACAGATAGTAAATGAAACATGACTATACATTTAAATTTTGTATTGACAAAAAAATGAAATATGTATGAAGAGTAACTAAAAGGCCACACAGAAAGTCAATTGAAGTTTGTCTAAGCTTAGTAAATAGTCAATTTAGGTAAAAACAAAAACACAACCAAATTGATGAAAGTAGTTTTGTTTGTTTAATTGGGAGGGTGAGTGATAGCGAGCATAGCTAGCTATTTTTCTATAATTAATTAAGCTAGTCTTTTACAATTATTTGCCCAAATTTATGCATTTTTATGTTTTATTTGTAGGAAGTATGTGTTTGAAGCTTAGTTCAGCAATTGGAGTCAAATGGAGTTTTCAATCTAAAAAAAAAAAAAAAAAAAAAAATCATAGCGTCGAGACGCTACGTGACTAGCGTCGCGACGCTAGGCAATTTTCCAGAATCCGTGATTTCGCGGTAGCGTCGCGACGCTACGACCAATTTTTGCCTTATTTAAAGATTGCGATTAGGGCTTTTTGGGGGACTTCTTTTGGGAGCTTTTTAGCCGTAAAACAGAGAAAAAAATGATATTTTGAAGCTGAAGCAAGCGGGGGAGCGTGGAATTGAAGACTTTGTTCGTGGAGATCGTAACGGGGACGTGCGGTCTCGGCCTCCATAGTGTTTAATCTTCTTTCCCCCTTACTTTAGTTAGTTTTTAATGGCTTTTTCCTACTTAGTTTATCTTGTAACGCCATGTATGAGTAACTAAGTTTGTTACTTAGGGATTGATGTAGTCTTTTTAGTTTATGGATTGATTTATGGGTTGAATTGTGCAATTGTTTTATGTTTGCATTCTTAATTTAATGCTTTCAATTAATTGGCCACTAGTTGAATGATCTAAGTGTTGATTCTTGCTCGGGAGAGGGGATTTAGCGTAGACTTTATTAAGATTGCATGACTAAAGTAGAATCTCTAAAATCGTGACGGAATTTAGAGTAACTTTAGAATCGGTTAAAAAGAACTAATTGCCTTGCTTATTAAAGAACTTAGATAGGGATATCAAGTTAGTTAATTTTCATGAGAATCAATTATACTCGGGAGAGGTAGTTGTGATTAAAGGTTCTTAGACTCATAAACCCATTGTGCGTTATAATTCATTCCCTAAAATCAATCCTAGATTAAATTGACGAAATCAATTCCCTAAGTATTCTTTCAATTGAATTTCACATCCTTGATTTGCATTACCTTGGTTTCTAAATTTCACTACTTGTTGGTCCCTAAATAAAATTGAGCAAGATTATTCATGGTAATTGATTTAACTTAAAAATCCAATCCAGAGGACGACACTCGATTTTTCGATCACTTTATTATTACTTGACCCGTGCGCTTGCGGTAAGGAAAATTCCACATCAAGTTTTTGGCGCCGTTGCCGGGGATTGACATATTTAGTTAAATTAATATTGTGAAAAAATTGTTCGGTCTTAATTTAGGGTGTATTTTATTTTTGATATTTTTTATTTTTAGGTAGATTGCATTTTTTCCATATTTGCTTTCTTGCCATATTTAGTTTTTCCTTATTTGTTTTATTTCCTTTTTTTTTGTTTTTGTTTTCCTTTTCTATTTAGTTTTCTTTGTTCTTATTTTTCTTTCCTTTTTTGTTTGAGTCTTAGTCCTTTGTTCTTGTTGGGTTATTATTTGATTGGAAGCCTAATTATCATTGTTGCTTTGATTGCTCTGAATGACTTTTTATTCAACATCGTACTCCAATTTTTCATCTTCAAGTTTTACCCCTTTAAAAGAAAATTCTTCCTTGGAAAGCATAGTTCAAAATTATATTGAGGAGTCTAGAGCGAGGAGTCTAAAATTTGATGAAATCATAAGAGGACTTCAAACCCCAAAGGAAGTTAGTGAGGTGGGATCCACTTCCATAGGTTGTCTAGTGAGTCATGTGGCCGGTGATTCATTGGCACCCATTCATGAGCTTAATTCTTTCGATCTTGCTGAGGATGAGCATTTAGGGGTGAGTTGCATAGATAGTAGAGAAGAATTGGAGAGTTGTAGCACCTTTCAAGAACATGTTTGTGAGGAAGAAAAAGAAAATGAGCTTGCAGTGACAGAGGAAGTTCAGGAGGTAGAGTTTGAGGTTGAAAAGCCTTCGTCTGATTTATCTTCTCCATCCTTTGTAGATTTTGATTGTTCTTTTTTCTATTCTCACGAGTCAGTTTTAGAGTCTGAGTCTTTTTATTTTGATCTTTCTCCTTTTATGTTTATTTTATTCAAAAAGACTAAAAATAATTCTGTTTCAGGGGCCCATGAGAAGCTAGTCAGTTTGCTAGCGATCGTTGGTTATATTGATTCAAGGAAGAAGGGCCCAAAGAAATACGAGAAATTTTATGTGCCTTGACAGACTGCACGAGCACGTCGAGCTAAAGACGTTAAACAAGCGCTTATGGGAGGCAACCCAAGTTACTTTGTTATTGTTTTTTTTTTACTGTGTTGTTTTTGTTTTGTAGGAGGTTCCGTGCTCTTGTCTGTGCCAAGCATTCATGAAAAGGTCATCATTACAGGGCAGTATTGTTCACCCCTTCCATTCTTTATTTGTTCTCATGCTTGACTATGCTTTATTTTCTTCATACATTGAGGACAATGCATGCTTTAAGTTTGGGGGTGGAATATCATGTTTGTGGAGCCCTTGAGCATCTGAGTTCGGGCTATAGTTTTGAGATTTCTTTGAATTGAGCATATGGTTGTTTTCTGGATGCTATTCTTGCATGACTATGATTTCCTAGGATAGGCTTTCTTGTCAATTCTCAAGCTTTCGATGAGTTGTAAGCATGAGTGCCCAAAAAGGGAGACTTTTTAAACTTTTTCTAGGAAATGTCTTGCATGAGTAAAGTATTTGTCTTGGCTAGATTTGGATTTGAATGCTTAGGAGCGAATTATTAGGTTCATATGCTTGTTGTCACCTCGATAGGTGTAGGGAAGAGCTAAAGAGTTAATTTTTTGCAAATTAGCATGTTTGATCTTGCTTAGGAGGAAAGAAAAGAATATATGCTTATCATGCTCATAAAGAAAAATCACTCTTGTCTTTACTTTTGAAAGAAAAGAAATTATTATGCCATGGCCTGTGCGCGCAATGCAATGGTTAATAAAGTTTAGGCAAAAAGAGCTACCCCTGTTGTGATCAGTTAGGCCAACCAGAGAAAACTCAGGTTAAGGATCCCTGCAATAGGTGTGTGAAAGCTAGTGCCACATAAAAAATGCTTGATTTAATTTTCGCTTATAAGCACCTAAGTATGGAGGAAAACAAACTAATTTGTTCCATTGACTCGTTAGTGAATCCTTAGTGCCAGTGTAGAGGGAAGATTAGTTGAGAGTTTAATAATCCAATCCCGGGCTAGTAGAGTCTGATCTAGTTGAGTTAGATCTCGCTTGTGCAAGTTAATTTTGGAAAACTTTTGATTTGTCTCCCTCATTGGTCCTTATGTGCATGTCTCTTGATTGCTTGAGTATTGACTTTTGAGCCTTGAGGATTGAGTCATGTTTGTTGCATCCATTCTTCCATTGTATGCTTGATTTTTAGTTTGCTCGAGGACTAGCAAAAGCTTAAGTTTGGGGGTGTTTGATAGCGAGCATAGCTAGCTATTTTTCTATAATTAATTAAGCTAGTCTTTTACAATTATTTGCCCAAATTTATGCATTTTTATGTTTTATTTGTAGGAAGTATGTGTTTGAAGCTTAGTTCAGCAATTGGAGTCAAATGGAGTTTTCAATCTAAAAAAAAAAAAAAAAAAAATCATAGCGTCGAGACGCTACGTGACTAGCGTCGCGACGCTAGGCAATTTTCCAGAATCCGTGATTTCGCGGTAGCGTCGCGACGCTACGACCAATTTTTGCCTTATTTAAAGATTGCGATTAGGGCTTTTTGGGGGACTTCTTTTGGGAGCTTTTTAGCCGTAAAACAGAGAGAAAAATGATATTTTGAAGCTGAAGCAAGCGGGGGAGCGTGGAATTGAAGACTTTGTTCGTGGAGATCGTAACGGGGACGTGCGGTCTCGGCCTCCATAGTGTTTAATCTTCTTTCCCCCTTACTTTAGTTAGTTTTTAATGGCTTTTTCCTACTTAGTTTATCTTGTAACGCCATGTATGAGTAACTAAGTTTGTTACTTAGGGATTGATGTAGTCTTTTTAGTTTATGGATTGATTTATGGGTTGAATTGTGCAATTGTTTTATGTTTGCATTCTTAATTTAATGCTTTCAATTAATTGGCCACTAGTTGAATGATCTAAGTGTTGATTCTTGCTCGGGAGAGGGGATTTAGCGTAGACTTTATTAAGATTGCACGACTAAAGTAGAATCTCTAAAATCGTGACGGAATTTAGAGTAACTTTAGAATCGGTTAAAAAGAACTAATTTCCTTGCTTATTAAAGAACTTAGATAGGGATATCAAGTTAGTTAATTTGCATGAGAATCAATTATACTCGGGAGAGGTAGTTGTGATTAAAGGTTCTTAGACTCATAAACCCATTGTGCGTTATAATTCATTCCCTAAAATCAATCCTAGATTAAATTGACGAAATCAATTCCCTAGGTATTCTTTCAATTGAATTTCACATCTTTGATTTGCATTACCTTTGTTTCTAAATTTCCTACTTGTTGGTCCCTAAATAAAATTGAGCAAGATTATTCATGGTAATTGATTTAACTTAAAAATCCAATCCAGAGGACGACACTCGATTTTTCGATCACTTTATTATTACTTGACCCGTGCGCTTGCGATAAGGAAAATTCCACATCAGTGAGAGATATCCAATCATTAATAACAAAAGTATTTTTGTTATGATTGATTGGTACCAAATAATATCTCCAACGGCTCTTGAACTCCTTGCTCTCTGAAGTGGTGAGTTATCCACGAGCAAAAGAGTTAGAGAGTCGGAAGATGGAAGCAGAAGGAGTACATAGGTAGTTAAGCAAATCTCAAGATAACAAATGAAGAAAAAAGGGGCAACAGTTAAACTAGAAGAAGATACTATAGAAGAAACAAATAAGGAGTTGCAAAGCACACTTATGTGCAAACACCTATCGGATAAGAGTATAAGTGGAGAAGCAATCAAATCCCTTATGTCAAGAATTTGGAATATAGAAGGAAGGGTGGTGATGAAAATGATAGAAAAAAATATACTTCTGTGTGTGAATTCAAGAATAGCAGGGACATGGTCAAAATAGTAGGGGGTCATGGCATTTTGACAATGCCATACTACTATTTTAGGAATAAAAAGGGAATAGGCAAATATCCAAACTGGAATTCAGGGATGAAAAATTTTGGGTTCATTTTTTTGTCTCAACAAGGAAAATTGTAGAAGCCCTAGGGAATGCGATAAGGGAGTTTGAAAAGGTGGAAGCAGCTGAAGAGATAGGAAGACGCTAGAAGAACTCTCTGAGAGTAAAATTGAAGATAGATATCAAAAAAACCTTTGAAATGAGGAGCAAACCTTACAATTGACTCGGTAGAGGAAGACATGTGGATCCTAGTAGCCTACAAAAAGTTACTAGATTTTTGTTACGAGTGTGGAATCGTAGAGCACATACTCAGAGATTGTGAGAGTTGAAATCACCAGAGAAAGCCGAAGATCTCCAATACGACCCAAAGTTATGTTGAGGATGAATGAGTTCATGAAAGCCAACTGGAGGGGAAAGATGGAGAATGGAAGGGCTCAAAGGAGAGGTCAGAGAGGGAGAGGAAGAGACAGAGGAAGTGGCAGAAATTGGGATGAAAACAGGAAAAGAATGGAAGAAGAGGATCCAAGAGATGAAAAGTCGAGTAACACCTTTGTCGAAGAGACTGAAAGTAGCCGAAATCAGATGAGGGAGGAGACGAGATGTTAGTCAGAATTCCAACGGTAAAAAATCACAGAGACAAGAAAGGAACTATCTGACAAATAGAAAGACAGCGCAAAGAGACAAGAGATAAAGCCAACAGATGATTGAAGGATTGGAATTCCTAAATTCCCAGCAAAAGCCTATAAGATCGATTCGTATTTTAATTAAGTTTTCTAAAATACCAGTACATTGGTAAATCATACAGAACAATTCTATATTTAAACTAGGCTAAGCTTGCATTAGATCTAAATCTAATGATTGAAAGAACGCAATACTTACTTGTTGAAGGCTTTCTTCAATGAATTCCACGAAGAACAGTATGATTACAATAGAGACACTACCACCGAGATCTTCCAATTCTATATCTCTGGGACTAGGAACCAAGTTGTGGGACTTGGTGTTCTTGAATTTTGGAAAAAGAATTTCACTAGAATGTTGTGA

mRNA sequence

ATGGGGAACCACCCGAGTCAAGTGCCGACGACGATCCTTTCTCCTAATTGCTGGCAGCTCAAGACCGATGCATCCTGGAACGAGATGCTTGGTAGAGGAAGTGTAGGATGGGTGGTGCATGACTCGGAGGGATCCCTTGTCTGCGTCGGAATGAAGCAAATCAGGAAATTCTGGTCAATTAAGACGCTGGAAGTGAAAGCCATTCTAGAGGGATTACATCAAATTTCGGATACCTGTAAAAACAGATCAATCGCCGTTGATGTCCTAACGGACGCCATTGAAATCGTCAACATCCTCACTGGTAGAGTGGAGGATCTCTCGGAGGTGAAAGCGATCACCGACCAAATCAGCGTCTTAGCCTCGTCGTTGTCGGGCGTAATTTTGGACCACCCCGATGTACAAGGAGCTGACGAGGACAACCGGGCAGAAATCGGACTGGAGGATGAACCCCGGGGGCGAAACGGGCCAGTGGGTCAGGCCAAGACCGAAGGGGTCGGGCTCCTGCTCGGCTCGCCTGCGCGGGTCGAGCCCGTCTGGCTCCGTATGGTCCCTACCGCCTCTGGCCACCCCGGTTCCGTCTGGTTTGTCCCGAAACGCCTCCGAATACCTAAAAACCCTAGGAGCATGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCATGTTTACTCTTTTGCAGGCCACGTCTTCCCCCGTTCTCAAACAACTTCACTGTCGATTATCATGTGGAGCGAAGCTGAAGCAAGCGGGGGAGCGTGGAATTGAAGACTTTGTTCGTGGAGATCGTAACGGGGACGAGTCTAGAGCGAGGAGTCTAAAATTTGATGAAATCATAAGAGGACTTCAAACCCCAAAGGAAGTTAGTGAGGTGGGATCCACTTCCATAGGTTGTCTAGTGAGTCATGTGGCCGGTGATTCATTGGCACCCATTCATGAGCTTAATTCTTTCGATCTTGCTGAGGATGAGCATTTAGGGGTGAGTTGCATAGATAGTAGAGAAGAATTGGAGAGTTGTAGCACCTTTCAAGAACATGTTTGTGAGGAAGAAAAAGAAAATGAGCTTGCAGTGACAGAGGAAGTTCAGGAGGTAGAGTTTGAGGTTGAAAAGCCTTCGTCTGATTTATCTTCTCCATCCTTTGTAGATTTTGATTGTTCTTTTTTCTATTCTCACGAGATAGGCTTTCTTGTCAATTCTCAAGCTTTCGATGAGTTAGAGAAAAATGATATTTTGAAGCTGAAGCAAGCGGGGGAGCGTGGAATTGAAGACTTTGTTCGTGGAGATCGTAACGGGGACAGCACATACTCAGAGATTGTGAGAGTTGAAATCACCAGAGAAAGCCGAAGATCTCCAATACGACCCAAAGTTATGTTGAGGATGAATGAGTTCATGAAAGCCAACTGGAGGGGAAAGATGGAGAATGGAAGGGCTCAAAGGAGAGGTCAGAGAGGGAGAGGAAGAGACAGAGGAAGTGGCAGAAATTGGGATGAAAACAGGAAAAGAATGGAAGAAGAGGATCCAAGAGATGAAAAGTCGAGTAACACCTTTGTCGAAGAGACTGAAAGTAGCCGAAATCAGATGAGGGAGGAGACGAGATAA

Coding sequence (CDS)

ATGGGGAACCACCCGAGTCAAGTGCCGACGACGATCCTTTCTCCTAATTGCTGGCAGCTCAAGACCGATGCATCCTGGAACGAGATGCTTGGTAGAGGAAGTGTAGGATGGGTGGTGCATGACTCGGAGGGATCCCTTGTCTGCGTCGGAATGAAGCAAATCAGGAAATTCTGGTCAATTAAGACGCTGGAAGTGAAAGCCATTCTAGAGGGATTACATCAAATTTCGGATACCTGTAAAAACAGATCAATCGCCGTTGATGTCCTAACGGACGCCATTGAAATCGTCAACATCCTCACTGGTAGAGTGGAGGATCTCTCGGAGGTGAAAGCGATCACCGACCAAATCAGCGTCTTAGCCTCGTCGTTGTCGGGCGTAATTTTGGACCACCCCGATGTACAAGGAGCTGACGAGGACAACCGGGCAGAAATCGGACTGGAGGATGAACCCCGGGGGCGAAACGGGCCAGTGGGTCAGGCCAAGACCGAAGGGGTCGGGCTCCTGCTCGGCTCGCCTGCGCGGGTCGAGCCCGTCTGGCTCCGTATGGTCCCTACCGCCTCTGGCCACCCCGGTTCCGTCTGGTTTGTCCCGAAACGCCTCCGAATACCTAAAAACCCTAGGAGCATGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCATGTTTACTCTTTTGCAGGCCACGTCTTCCCCCGTTCTCAAACAACTTCACTGTCGATTATCATGTGGAGCGAAGCTGAAGCAAGCGGGGGAGCGTGGAATTGAAGACTTTGTTCGTGGAGATCGTAACGGGGACGAGTCTAGAGCGAGGAGTCTAAAATTTGATGAAATCATAAGAGGACTTCAAACCCCAAAGGAAGTTAGTGAGGTGGGATCCACTTCCATAGGTTGTCTAGTGAGTCATGTGGCCGGTGATTCATTGGCACCCATTCATGAGCTTAATTCTTTCGATCTTGCTGAGGATGAGCATTTAGGGGTGAGTTGCATAGATAGTAGAGAAGAATTGGAGAGTTGTAGCACCTTTCAAGAACATGTTTGTGAGGAAGAAAAAGAAAATGAGCTTGCAGTGACAGAGGAAGTTCAGGAGGTAGAGTTTGAGGTTGAAAAGCCTTCGTCTGATTTATCTTCTCCATCCTTTGTAGATTTTGATTGTTCTTTTTTCTATTCTCACGAGATAGGCTTTCTTGTCAATTCTCAAGCTTTCGATGAGTTAGAGAAAAATGATATTTTGAAGCTGAAGCAAGCGGGGGAGCGTGGAATTGAAGACTTTGTTCGTGGAGATCGTAACGGGGACAGCACATACTCAGAGATTGTGAGAGTTGAAATCACCAGAGAAAGCCGAAGATCTCCAATACGACCCAAAGTTATGTTGAGGATGAATGAGTTCATGAAAGCCAACTGGAGGGGAAAGATGGAGAATGGAAGGGCTCAAAGGAGAGGTCAGAGAGGGAGAGGAAGAGACAGAGGAAGTGGCAGAAATTGGGATGAAAACAGGAAAAGAATGGAAGAAGAGGATCCAAGAGATGAAAAGTCGAGTAACACCTTTGTCGAAGAGACTGAAAGTAGCCGAAATCAGATGAGGGAGGAGACGAGATAA

Protein sequence

MGNHPSQVPTTILSPNCWQLKTDASWNEMLGRGSVGWVVHDSEGSLVCVGMKQIRKFWSIKTLEVKAILEGLHQISDTCKNRSIAVDVLTDAIEIVNILTGRVEDLSEVKAITDQISVLASSLSGVILDHPDVQGADEDNRAEIGLEDEPRGRNGPVGQAKTEGVGLLLGSPARVEPVWLRMVPTASGHPGSVWFVPKRLRIPKNPRSMSSIGGGVASTTPVCMFTLLQATSSPVLKQLHCRLSCGAKLKQAGERGIEDFVRGDRNGDESRARSLKFDEIIRGLQTPKEVSEVGSTSIGCLVSHVAGDSLAPIHELNSFDLAEDEHLGVSCIDSREELESCSTFQEHVCEEEKENELAVTEEVQEVEFEVEKPSSDLSSPSFVDFDCSFFYSHEIGFLVNSQAFDELEKNDILKLKQAGERGIEDFVRGDRNGDSTYSEIVRVEITRESRRSPIRPKVMLRMNEFMKANWRGKMENGRAQRRGQRGRGRDRGSGRNWDENRKRMEEEDPRDEKSSNTFVEETESSRNQMREETR

Homology

[Close]

BLAST of Spg004567 vs. NCBI nr
Match: KAG6599977.1 (hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 70.1 bits (170), Expect = 6.6e-08
Identity = 42/112 (37.50%), Postives = 63/112 (56.25%), Query Frame = 0


Query: 19  QLKTDASWNEMLGRGSVGWVVHDSEGSLVCVGMKQIRKFWSIKTLEVKAILEGLHQ---I 78
           +L + ASW+E  G+G V WV+HDS GS +C+  K++R+ W +K LE KA++EGL     I
Sbjct: 7   KLNSYASWSEEAGKGGVSWVIHDSLGSSICIECKELRRKWLVKMLEGKAMIEGLKTYLLI 66

Query: 79  SDTCKNRSIAVDVLTDAIEIVNILTGRVEDLSEVKAITDQISVLASSLSGVI 128
            +T       +  L    E+  IL     DL E+  + D+I  L   L+G+I
Sbjct: 67  RETVSYSHRPIIFL----ELARILNNTHMDLIELSNVVDEIFDL-ELLAGII 113

[Close]

BLAST of Spg004567 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 68.2 bits (165), Expect = 2.5e-07
Identity = 33/105 (31.43%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 18  WQLKTDASWNEMLGRGSVGWVVHDSEGSLVCVGMKQIRKFWSIKTLEVKAILEGLHQISD 77
           W L  DASW++   RG +GW++   +G +V  G + +    ++K LE  AILEGL  +++
Sbjct: 79  WTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEASAILEGLRNLTN 138

Query: 78  TCKNRSIAVDVLTDAIEIVNILTGRVEDLSEVKAITDQISVLASS 123
               R + ++  TD+ E+ ++L  + EDL++   + ++I  L  S
Sbjct: 139 LGVLRPLHIE--TDSAEVESLLNRKREDLTKTGWVVEEILNLRDS 181

[Close]

BLAST of Spg004567 vs. NCBI nr
Match: XP_022143317.1 (uncharacterized protein LOC111013216 [Momordica charantia])

HSP 1 Score: 62.4 bits (150), Expect = 1.4e-05
Identity = 32/92 (34.78%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 16  NCWQLKTDASWNEMLGRGSVGWVVHDSEGSLVCVGMKQIRKFWSIKTLEVKAILEGLHQI 75
           NCW+L TDASW+E    G +GW++ D  G +V  G  +IR+   I  LE+  I+ GL  I
Sbjct: 111 NCWKLNTDASWSEEREVGGIGWILCDCRGEIVLAGNCKIREKKEINALELMTIIRGLQFI 170

Query: 76  SDTCKNRSIAVDVLTDAIEIVNILTGRVEDLS 108
           +   ++RS  + + +D++E++ ++     DL+
Sbjct: 171 N--MQSRS-PIYLESDSVEVIRLMKKEDVDLT 199

[Close]

BLAST of Spg004567 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-07
Identity = 33/105 (31.43%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 18  WQLKTDASWNEMLGRGSVGWVVHDSEGSLVCVGMKQIRKFWSIKTLEVKAILEGLHQISD 77
           W L  DASW++   RG +GW++   +G +V  G + +    ++K LE  AILEGL  +++
Sbjct: 79  WTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEASAILEGLRNLTN 138

Query: 78  TCKNRSIAVDVLTDAIEIVNILTGRVEDLSEVKAITDQISVLASS 123
               R + ++  TD+ E+ ++L  + EDL++   + ++I  L  S
Sbjct: 139 LGVLRPLHIE--TDSAEVESLLNRKREDLTKTGWVVEEILNLRDS 181

[Close]

BLAST of Spg004567 vs. ExPASy TrEMBL
Match: A0A6J1CQG0 (uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013216 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.7e-06
Identity = 32/92 (34.78%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 16  NCWQLKTDASWNEMLGRGSVGWVVHDSEGSLVCVGMKQIRKFWSIKTLEVKAILEGLHQI 75
           NCW+L TDASW+E    G +GW++ D  G +V  G  +IR+   I  LE+  I+ GL  I
Sbjct: 111 NCWKLNTDASWSEEREVGGIGWILCDCRGEIVLAGNCKIREKKEINALELMTIIRGLQFI 170

Query: 76  SDTCKNRSIAVDVLTDAIEIVNILTGRVEDLS 108
           +   ++RS  + + +D++E++ ++     DL+
Sbjct: 171 N--MQSRS-PIYLESDSVEVIRLMKKEDVDLT 199

The following BLAST results are available for this feature:

BLAST of Spg004567 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599977.1	6.6e-08	37.50	hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022155262.1	2.5e-07	31.43	uncharacterized protein LOC111022403 [Momordica charantia]	[more]
XP_022143317.1	1.4e-05	34.78	uncharacterized protein LOC111013216 [Momordica charantia]	[more]

BLAST of Spg004567 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg004567 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNV9	1.2e-07	31.43	uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1CQG0	6.7e-06	34.78	uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Spg004567 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 22..130 e-value: 6.9E-12 score: 45.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 471..534
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 474..534

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg004567.1	Spg004567.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity