Spg004442 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCAACACATCCAATTTACAAATTGCAATATATTCTTCTAACTCGATCGAAACCACAATGTCGGAGGAGAACCACCACCGCCGCCACCACCACGGCCTCTTCCATCGCCACAAGGACGACGATGAAAATGTCCCCTCCGAAACCACCCCATATTCTGAATCTCAATTCTCCAAGAATTCCACCTACTCTTCTGACCTCTCTGAAAACAAAACCGCCACTTACGGCGGTGGCTACGGTGAGTCAGATAACAAGGCCACCGAGTACGGTGGTGCCTACGGCGAGTCGGAAGATAAGGCTGGCGAATACGGTGGTGGCTATACTAAGCATGGAAACAAGGCCACCGAGTACGGTGGCGGCTATAGTGAATCGGAAAATAAGGCTGCCGAGTACGGCGGTGGCTATGGTGAGTCTGGAAAGAAGACCACCGAGTACGGTGGTGGCTACGGTGAATCTGGAAACAAGGTCTCTGAGTATGGTGGTGGCTACGGTGAGTCGGAAGATAAGGGAACCGAATACGGTAGTGGCTATGGTAAGTCTGGAAAGAAATCCGCCGAGTACGGTGGTGGGTACGGTGAGTCAGAAGATAAGGTGGCGGAGTACGGTAGTGGGTACGATAAGTCTGGAAGTAAGGCGAGTGAGTACGGCGGTGGGTATGGTGAGTCGGAAGATAAGGCCGCCGAGTACGGTGGTGGCTACGGTAAGTCTGAAAATAAGTCCGGCGAGTACGGCGGTGGGTACGAGGAGTCAGAAGGTGGTTACAAGAAGGGATATGGGGAAGAAAATGAAGAGGGAATTTCAGAGGATTACAAAAAGGAAGAGAAACACCACAAGAACCTTGAGCACCTCGGCGAGCTCGGCGCTGCTGCCGCCGGTGCCTTTGCATTGGTAAATATTAAAATGTTTTTCAAAAATGCATTTTTTTTAAAAGACATTCTGTATAAAAATTAGTCGTATGTTTGATTATATTTTCTTATAAGTGGTTTTTTGTATACTTAAAACTTTTTTTAAAAAAGTTGATTTCAAGTGTTTCTAAGTCATTTTTAGTGGTTGCCGAACACTAGAAATCTTTTCAAAATAATTTTTTTTTTCAAAATTAAGCATTTGAAAAGTTAAACCAAATAGACCCTTAATTTACATCATAATATTCGAAATGAAAATTGCTCAATTTAGAAATGACTTGGCTCATACGAATATGGAGATCTCCTTACACACCACCATTAAAATGTTGACAATTAAGAGATAAATAAATTTTCTTATTTTCTACCTTTTTCTCTTAGCTGTCAAGATTTTAATTGGTGGCATAAGAGAAATCACTACACATCGTAGCCAAGTATTATTGATTTAGAAAATAATCCAAGTTTGCATGATATCTTTGATGTTTTAATAATTATTCAGGATATATATATATATAACAATTTATATATGTAAAATAGTGAGGGTTTCCATTTCTATTTTGAGTTAAGTACTTTCGAGTATATTTAATTATAAATTTAGTCTTCAAATTAGGATCATGGTGTCTATTTCCTTACTTGATTAGTGTTGTTTAAGTATAGTGATTCAACTACACAAATGATTATTTGACATGACAATACCAGAGAACTAGTTTAGATGGATATAATTATAAGAGATAGGCCTAAAAATTTAATAACCTATGTTTTGTACAACGTCATGCTAGTTTATCACTAATTAGTTTAAATTAACATGTCATGTTAACATTTTAAGTATCAGGATGGGTGATGATAACTTACTAAAATGGAAGTCAAGTGGCTAGCTAAGGATGAGTTTCTTTTTAGAGTTAGACATAATCATCCACTTTCAAGACTAAATTTATAATTTAAGCCTTTCTTTTTGAAAAATAATTTAAGCTTTTAATTAGTAAGTTTTGATCAAGGCTTTATAAAAGAAAAAAAAAATCCATTTTAATATTTTTGCCACAAAATTTCGTTGCCATATTTAACAAGAACTTTACGCGACATCACATAAAACTTTGCATTTGTTTTGAGCCACACCTATCAAATTAGGTGTCATATTCAATGATAGGTGACTTGAGGAGGAGGGTTCTAATAAATGCAACAAAAAATTAAAGATAAGAGACCAACACGAGTATCCATACGCTTTATACTAAGGAAAAAACTTGCCAGCGTACTGGTATGTAGGGATCTCTCTACATACCATCATTAAAACGTTGACAACTAAGAGAGATAACAAAAAATTCTCATTTTCTCCCTTCCTCTTTCTTACTTGTGGGGTATGTAGGGATACCGGTATAGGCAAGTTTTGTTCTTATACTAAAACAAACAAAAATAATATTTGATATTGTAGAAGAGTGGGTTGGGATTTTCCTACCCACCCCATTAAAAGCTTGACAACTAAGAGAGAAAGGTAGAATAGATTTTTTTTTTTATCTCTCTTTGTTGTCAACAACGTTGGGTAGGAGATTTGAATCTCTCACCTCTAGTACATGTCAATTACCGTTGAGTTATGCTCACTTTGACAATAATTACTGAGTTGTAGACTTTTTTTAAGGAAACAAAATATTTAATACATTAAATAGAATTTGTTAAGAGAAATTAACTAACGTTTTCTTTTTCTCCAAATATAATCAAGCATGAGAAGCATGAAGCAGAGAAGGACTCAGAGCATGGACACAGACACAAGTTAGAGGAGGAGATAGCGGTGGCAGCCGCCGTGGGAGGCGGTGGCTTTGCATTTCATGAGCACCACGAGAAGGAAGAGGCCAAAGAGCAAGACGAAGAGGCTCATGAAAAGAAACACCACCACCATATATTCTAAACCCCGTGCTTCGTCATTCACCCCTTTTTCACGTCTGGTTTTTGCAAAGCTATCGTCAACTTAAAAATATACAAAAAAAAAAGAAAAGAAAAAAGAAAAAAAAATCAGGTGTTTTAAAATTTATAATAAAATTTTAAAATACCTGTGTTTGTATTTTCAATAAATTAAAGTTTTAAAATCTATACTACTATTGTGTAATGTGTGAGATCTAGTGAGTGCCTTCTCTCTGGGTTTGTATTGTATTTGATTTTCTTTTTTTGTTATGTTTTTTTTTTTCTGATTTAAAAAATTTAGAAGTGTGTTGGAGGGGTGGAGTTGTAATATGCTAGCTCTGTGCAATAATATTTAATTTCTTTCCTTTTCTTATGTTAATATATTTCACTTGCATAAATGTTCAATAATTATAT ATGTCGGAGGAGAACCACCACCGCCGCCACCACCACGGCCTCTTCCATCGCCACAAGGACGACGATGAAAATGTCCCCTCCGAAACCACCCCATATTCTGAATCTCAATTCTCCAAGAATTCCACCTACTCTTCTGACCTCTCTGAAAACAAAACCGCCACTTACGGCGGTGGCTACGGTGAGTCAGATAACAAGGCCACCGAGTACGGTGGTGCCTACGGCGAGTCGGAAGATAAGGCTGGCGAATACGGTGGTGGCTATACTAAGCATGGAAACAAGGCCACCGAGTACGGTGGCGGCTATAGTGAATCGGAAAATAAGGCTGCCGAGTACGGCGGTGGCTATGGTGAGTCTGGAAAGAAGACCACCGAGTACGGTGGTGGCTACGGTGAATCTGGAAACAAGGTCTCTGAGTATGGTGGTGGCTACGGTGAGTCGGAAGATAAGGGAACCGAATACGGTAGTGGCTATGGTAAGTCTGGAAAGAAATCCGCCGAGTACGGTGGTGGGTACGGTGAGTCAGAAGATAAGGTGGCGGAGTACGGTAGTGGGTACGATAAGTCTGGAAGTAAGGCGAGTGAGTACGGCGGTGGGTATGGTGAGTCGGAAGATAAGGCCGCCGAGTACGGTGGTGGCTACGGTAAGTCTGAAAATAAGTCCGGCGAGTACGGCGGTGGGTACGAGGAGTCAGAAGGTGGTTACAAGAAGGGATATGGGGAAGAAAATGAAGAGGGAATTTCAGAGGATTACAAAAAGGAAGAGAAACACCACAAGAACCTTGAGCACCTCGGCGAGCTCGGCGCTGCTGCCGCCGGTGCCTTTGCATTGCATGAGAAGCATGAAGCAGAGAAGGACTCAGAGCATGGACACAGACACAAGTTAGAGGAGGAGATAGCGGTGGCAGCCGCCGTGGGAGGCGGTGGCTTTGCATTTCATGAGCACCACGAGAAGGAAGAGGCCAAAGAGCAAGACGAAGAGGCTCATGAAAAGAAACACCACCACCATATATTCTAA ATGTCGGAGGAGAACCACCACCGCCGCCACCACCACGGCCTCTTCCATCGCCACAAGGACGACGATGAAAATGTCCCCTCCGAAACCACCCCATATTCTGAATCTCAATTCTCCAAGAATTCCACCTACTCTTCTGACCTCTCTGAAAACAAAACCGCCACTTACGGCGGTGGCTACGGTGAGTCAGATAACAAGGCCACCGAGTACGGTGGTGCCTACGGCGAGTCGGAAGATAAGGCTGGCGAATACGGTGGTGGCTATACTAAGCATGGAAACAAGGCCACCGAGTACGGTGGCGGCTATAGTGAATCGGAAAATAAGGCTGCCGAGTACGGCGGTGGCTATGGTGAGTCTGGAAAGAAGACCACCGAGTACGGTGGTGGCTACGGTGAATCTGGAAACAAGGTCTCTGAGTATGGTGGTGGCTACGGTGAGTCGGAAGATAAGGGAACCGAATACGGTAGTGGCTATGGTAAGTCTGGAAAGAAATCCGCCGAGTACGGTGGTGGGTACGGTGAGTCAGAAGATAAGGTGGCGGAGTACGGTAGTGGGTACGATAAGTCTGGAAGTAAGGCGAGTGAGTACGGCGGTGGGTATGGTGAGTCGGAAGATAAGGCCGCCGAGTACGGTGGTGGCTACGGTAAGTCTGAAAATAAGTCCGGCGAGTACGGCGGTGGGTACGAGGAGTCAGAAGGTGGTTACAAGAAGGGATATGGGGAAGAAAATGAAGAGGGAATTTCAGAGGATTACAAAAAGGAAGAGAAACACCACAAGAACCTTGAGCACCTCGGCGAGCTCGGCGCTGCTGCCGCCGGTGCCTTTGCATTGCATGAGAAGCATGAAGCAGAGAAGGACTCAGAGCATGGACACAGACACAAGTTAGAGGAGGAGATAGCGGTGGCAGCCGCCGTGGGAGGCGGTGGCTTTGCATTTCATGAGCACCACGAGAAGGAAGAGGCCAAAGAGCAAGACGAAGAGGCTCATGAAAAGAAACACCACCACCATATATTCTAA MSEENHHRRHHHGLFHRHKDDDENVPSETTPYSESQFSKNSTYSSDLSENKTATYGGGYGESDNKATEYGGAYGESEDKAGEYGGGYTKHGNKATEYGGGYSESENKAAEYGGGYGESGKKTTEYGGGYGESGNKVSEYGGGYGESEDKGTEYGSGYGKSGKKSAEYGGGYGESEDKVAEYGSGYDKSGSKASEYGGGYGESEDKAAEYGGGYGKSENKSGEYGGGYEESEGGYKKGYGEENEEGISEDYKKEEKHHKNLEHLGELGAAAAGAFALHEKHEAEKDSEHGHRHKLEEEIAVAAAVGGGGFAFHEHHEKEEAKEQDEEAHEKKHHHHIF Homology
BLAST of Spg004442 vs. NCBI nr
Match: XP_023520940.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 369.0 bits (946), Expect = 4.3e-98 Identity = 230/335 (68.66%), Postives = 256/335 (76.42%), Query Frame = 0
BLAST of Spg004442 vs. NCBI nr
Match: XP_022932803.1 (keratin, type I cytoskeletal 9-like [Cucurbita moschata]) HSP 1 Score: 365.9 bits (938), Expect = 3.7e-97 Identity = 228/332 (68.67%), Postives = 253/332 (76.20%), Query Frame = 0
BLAST of Spg004442 vs. NCBI nr
Match: XP_022152209.1 (uncharacterized protein At5g39570-like [Momordica charantia]) HSP 1 Score: 360.5 bits (924), Expect = 1.5e-95 Identity = 234/380 (61.58%), Postives = 264/380 (69.47%), Query Frame = 0
BLAST of Spg004442 vs. NCBI nr
Match: KAG6592258.1 (Abscisic stress-ripening protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 336.7 bits (862), Expect = 2.4e-88 Identity = 208/327 (63.61%), Postives = 234/327 (71.56%), Query Frame = 0
BLAST of Spg004442 vs. NCBI nr
Match: XP_022974035.1 (keratin, type I cytoskeletal 9-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 319.7 bits (818), Expect = 3.0e-83 Identity = 213/334 (63.77%), Postives = 244/334 (73.05%), Query Frame = 0
BLAST of Spg004442 vs. ExPASy Swiss-Prot
Match: P37219 (Abscisic stress-ripening protein 2 OS=Solanum lycopersicum OX=4081 GN=ASR2 PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.5e-24 Identity = 59/95 (62.11%), Postives = 74/95 (77.89%), Query Frame = 0
BLAST of Spg004442 vs. ExPASy Swiss-Prot
Match: Q08655 (Abscisic stress-ripening protein 1 OS=Solanum lycopersicum OX=4081 GN=ASR1 PE=2 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 4.3e-24 Identity = 58/87 (66.67%), Postives = 75/87 (86.21%), Query Frame = 0
BLAST of Spg004442 vs. ExPASy Swiss-Prot
Match: P37220 (Abscisic stress-ripening protein 3 OS=Solanum lycopersicum OX=4081 GN=ASR3 PE=3 SV=2) HSP 1 Score: 109.8 bits (273), Expect = 6.2e-23 Identity = 55/91 (60.44%), Postives = 75/91 (82.42%), Query Frame = 0
BLAST of Spg004442 vs. ExPASy Swiss-Prot
Match: A2ZBV1 (Abscisic stress-ripening protein 5 OS=Oryza sativa subsp. indica OX=39946 GN=ASR5 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.1e-22 Identity = 59/87 (67.82%), Postives = 69/87 (79.31%), Query Frame = 0
BLAST of Spg004442 vs. ExPASy Swiss-Prot
Match: Q53JF7 (Abscisic stress-ripening protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ASR5 PE=1 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.1e-22 Identity = 59/87 (67.82%), Postives = 69/87 (79.31%), Query Frame = 0
BLAST of Spg004442 vs. ExPASy TrEMBL
Match: A0A6J1F2S3 (keratin, type I cytoskeletal 9-like OS=Cucurbita moschata OX=3662 GN=LOC111439263 PE=3 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 1.8e-97 Identity = 228/332 (68.67%), Postives = 253/332 (76.20%), Query Frame = 0
BLAST of Spg004442 vs. ExPASy TrEMBL
Match: A0A6J1DFD1 (uncharacterized protein At5g39570-like OS=Momordica charantia OX=3673 GN=LOC111019988 PE=3 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 7.5e-96 Identity = 234/380 (61.58%), Postives = 264/380 (69.47%), Query Frame = 0
BLAST of Spg004442 vs. ExPASy TrEMBL
Match: A0A6J1ICX0 (keratin, type I cytoskeletal 9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472650 PE=3 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83 Identity = 213/334 (63.77%), Postives = 244/334 (73.05%), Query Frame = 0
BLAST of Spg004442 vs. ExPASy TrEMBL
Match: A0A6J1IAA4 (keratin, type I cytoskeletal 9-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472650 PE=3 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 2.3e-81 Identity = 213/334 (63.77%), Postives = 239/334 (71.56%), Query Frame = 0
BLAST of Spg004442 vs. ExPASy TrEMBL
Match: A0A0A0K8U6 (Abscisic stress ripening-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G014830 PE=3 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 2.7e-77 Identity = 205/343 (59.77%), Postives = 221/343 (64.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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