Spg004357 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg004357
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold5: 17930739 .. 17934263 (+)
RNA-Seq ExpressionSpg004357
SyntenySpg004357
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGCCATTTTCCTTAATGTTATGCTGCTAGAATTTGGACTCAAAGTTCTCTCATCTCTCATTCTTATCCATTGCTTGATGCTTCAAGCATTCCCTTCCCATTCCCTATCTTATATAGACTCCCACAAGTCGTTCTTGGCCCGGAGTATGGTAGGGAAGACTCTAGAGGTTGTCCAACGAGCATAGGAGAGGCAAACACCACAAGGAGTTCAACATAAGTGAGCTACAAAGGTTTGTGTTTTCTAAACTCTCTATTCTGTCTTTTCTAGAACATGCATGCTTTAGGAGTAAAATTGAATGTCTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTGTAATATGTACACCTTCAATTAGTATTTGATAGCGAGCAAAAATGTCGCTATTTTAGTCCCAATTTATTAGGCTTTTCTGTGCTTTAATCGTGTTATTAATGAAAATATTTAATGTATTCTGTTATTTGTTCCTTAGAGCAACGTCGGTGATTTTGGGAGAAAAAGTGCCAAAAATGAAGCCAATAAAGCCCAAATCCAAGCTTGGATCAAAAGGGGATCCAAAGAGGCCAATCATGATGGAAAAGCCCAAAAAGAAGTGAAGAGAAGGCCCAAAAATCAGCCCAAACCGAAGTTGGGAAATTCTGGAAAACGCATAGCATTGAGACGCTGTGAAGACAGCGTCGCGACGCTACCCACTTCTTGGGCAACAAGACGCGTGCGTAGCAGCGTCGCGACGCTGTGCAATGTAGCGTCGCGACGCTACCCCCAATTCGGGCCTATAAAAGGCACCTCTTGGTGCCTCATTTTGCATCAATCAAATCATTCTTGAATCCATCCTTTCTTTCCTTCCTTTGGCTCATTTGGAGCCTCTCTCAAGGCTTTCTAGCCTTTTTGAGAGATTTTAGTGGGAAATATTTGGGGAATTTTGGGGAGCATCCTAGGAGGCTCAAGGAGTGTTCGGCGGAGCTCTGAGCGTCAGCGAAGGGGTTCTTCGACGGTCAATTCCTTTCCTTTTATGCTCTTAATTATGCTTTCTATTGTAAATGTTGTGGATATTTTAGCTATGTATAGCTAAACCCCAATTTGGGGTCTTGGAATGAAATTATAATCAAAATGTTGTTATAATTACTTGTCTCTTGCCCTTTTTCCTAATTATTTGTATGGATGTGCTTAATGCTTTATTCAATCTGGCCAATTGTGTAATGATTCGATTCTTAATGGAAACTCGACGGAGAGAAGTTAGGATAGATCATAATCCATGCAACTAGTTTAATTGCTCGTCGTGACACCGGGATTAGTTGATTAAACCTAGATTCCTAAAATGAATCAGAGCGTAATAATTAATGATTTTTAATAGCGCTAAGGACACTTAGGTTGTTAAAATGAATTAATTACAATTAGGGGAAACCGACAGGAGAACCTATGTGATTAACGGAGATTCTAGGATTATAATTAGTTGGGCAATGAGATAGGATAATTATAACAATTGTTTGGCTAATAATTGATTTTCAAGACCCCTCTTCCCATTAAGAAAACTCTTTCTCCACATTTTATTTTTATCGATTGATCAAAATTATTTTCTTTAACTACTTTGATTTTTGGAATCTTTTTAACTGCATGAACTGTCCCCTAAATATTATTTCTCCTAATTATTTTTAGTGCTCAAGAGATTTTTGCTTGCTTAAATTTCGCTTCGCCTCCCTGTGGATTCGATACTCGGAATTCTTTCCGCTTTATATTACTTGCGATACCGTGCGCTTGCGGTAGACACACACGACAAGTTTTTGGCGCCGTTGCCGGGGAGGCTTGATTTTTAAGCAAATCAATTTTTCTTGACATCGAAAAGAAAGGGATAAATAGTAATTTAGGTGTAAATATTTTTCTTTTATTATTTTGTGAATATCATTTTATTTTTTGTTTGATTCTCTTGATTGATTGGGAGCATTGTATGCGAAGGAACAAGGTGGTTAATTTGTTTCCGTTAGATCTTGAAATTGACAGGACTCTTAGAACCATTCGTAGAGAGAAAAGATTAGCAGAAGCAATGGCCCAACAAGAAGCTCCCAAGGCGATCAGAGACTTTCTACAGCCAGTTCTTCCCACCGAAAATTCAGGAATCGTTTACGCCCCGATACAAGCTACAAATTTTGAGTTAAAGACGGGATTGATTCAGATGGCGCGCGATAATTCTTTTAAGGGACATCCTTCTGAGGATCCACACTCACATCTGAGATCATTCCTGGAAATATGCGGGACAGTAAAGATGAATGGAGTGCCGGCAGACGCTATCAGATTGAGATTGTTTCCATTTTCTCTACAAGACAAAGCTAAGGATTGGCTCGAATCAGTCGAGACGGGCACTATTAGTACATGGGATGAGCTTGCCCAGGCTTTTCTGACAAAATTTTTCCCGCCTGCCAAAACTACGAAGCTCCGGACTGAGATTGGGACGTTTAGACAGCTTGACGAGGAGCAGTTGTACGAGGCATGGGAGAGATACAAGGAGATGCTTAGGCAGTGTCCCCAGCATGGATATCCCGATTGGCTCCAAGTGCAATTATTTTACAATGGATTGAATCCCTCCACTAAGACAGTCCTAGACACATCAGCAGGAGGAAGTTTTCTTTCCAAGACGGTGACAGAAGCCAGGGATTTGTTAGAGGAAATGGCGGCAACCAGTTATCAATGGCCGACGGAGAGGGGAGCAGTTTCAAAGAAGGCTGGAATCTATGAATTGGATGAGTCGAGTTCGTTGAAGGCTCAGATTGCATCGCTGACCAACGCCCTGAACAAGTTAACTTCATCTGAGGTGGTCAAATCCATTTCCACCTTAGCTAAAGGCTATTCGAAGAAGGAAGGTCAGGATATGGAAGAAGTCCAGTACGTGGGGAACAGACCATTTACGCAAGGAATACCGAACTTCTACCACCCAAATCTGCGCAATCACGAGAACTTCTCGTACTCAAACACAAAGAATGTCTTGCAGCCGCCGCCAGGTTTTGCATCATCCAGTGCGCCTGAAAAGAAGAATAACCTGGAGGAGTTGGTGGCTATGTTTGTAAAAGAACAGAAAGTATTGAATGTCAATCTCCAGACAGTAGTCAATAACCACGACACTGCTTTGAAAAATATGGAAGTTCAAATAGGTCAGATAGCTTCAGTAGTGAATGCCCTTCAGAAGGGAAAATTTCCAAGCGACACTGAGCCTAACCCAAGAGAGCAGTGCAAGATGGTGACACTAAGAAGTGGTAGGAAGCTGGAAATCAGTTCAGAAAAGAAGAAGGAAGAAGAGAAGAGCAAGGAAGAAGATGAAAGGACTGAGGCACCAAAAGCCTCCTCTGAAAGGTCCCAACATCCTCCTAACTCTATTGATTTGAATTGTGGTTTTTCTAAATCTTTTGCAGGAAAAGAAAAAGAAGAAAGGCAAGAGGAGAAACTGTACGAGGAAGAAGTGGTTCCATGCAACCACCATGACAAAGGTTCGCACATCAACCCGCCCAAGCGGAGGGGCGTGAAGGGATAA

mRNA sequence

ATGAGAGCCATTTTCCTTAATGTTATGCTGCTAGAATTTGGACTCAAAGTTCTCTCATCTCTCATTCTTATCCATTGCTTGATGCTTCAAGCATTCCCTTCCCATTCCCTATCTTATATAGACTCCCACAAGTCGTTCTTGGCCCGGAGTATGGTAGGGAAGACTCTAGAGAGCAACGTCGGTGATTTTGGGAGAAAAAGTGCCAAAAATGAAGCCAATAAAGCCCAAATCCAAGCTTGGATCAAAAGGGGATCCAAAGAGGCCAATCATGATGGAAAAGCCCAAAAAGAAGTGAAGAGAAGGCCCAAAAATCAGCCCAAACCGAAGTTGGGAAATTCTGGAAAACGCATAGCATTGAGACGCTGTGAAGACAGCGTCGCGACGCTACCCACTTCTTGGGCAACAAGACGCGTGCGAAAAGAAAAAGAAGAAAGGCAAGAGGAGAAACTGTACGAGGAAGAAGTGGTTCCATGCAACCACCATGACAAAGGTTCGCACATCAACCCGCCCAAGCGGAGGGGCGTGAAGGGATAA

Coding sequence (CDS)

ATGAGAGCCATTTTCCTTAATGTTATGCTGCTAGAATTTGGACTCAAAGTTCTCTCATCTCTCATTCTTATCCATTGCTTGATGCTTCAAGCATTCCCTTCCCATTCCCTATCTTATATAGACTCCCACAAGTCGTTCTTGGCCCGGAGTATGGTAGGGAAGACTCTAGAGAGCAACGTCGGTGATTTTGGGAGAAAAAGTGCCAAAAATGAAGCCAATAAAGCCCAAATCCAAGCTTGGATCAAAAGGGGATCCAAAGAGGCCAATCATGATGGAAAAGCCCAAAAAGAAGTGAAGAGAAGGCCCAAAAATCAGCCCAAACCGAAGTTGGGAAATTCTGGAAAACGCATAGCATTGAGACGCTGTGAAGACAGCGTCGCGACGCTACCCACTTCTTGGGCAACAAGACGCGTGCGAAAAGAAAAAGAAGAAAGGCAAGAGGAGAAACTGTACGAGGAAGAAGTGGTTCCATGCAACCACCATGACAAAGGTTCGCACATCAACCCGCCCAAGCGGAGGGGCGTGAAGGGATAA

Protein sequence

MRAIFLNVMLLEFGLKVLSSLILIHCLMLQAFPSHSLSYIDSHKSFLARSMVGKTLESNVGDFGRKSAKNEANKAQIQAWIKRGSKEANHDGKAQKEVKRRPKNQPKPKLGNSGKRIALRRCEDSVATLPTSWATRRVRKEKEERQEEKLYEEEVVPCNHHDKGSHINPPKRRGVKG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..116

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg004357.1Spg004357.1mRNA