Spg004168 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg004168
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L10-like
Locationscaffold6: 6440374 .. 6441559 (-)
RNA-Seq ExpressionSpg004168
SyntenySpg004168
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGATTGAAGCAGGTACTGATGATAATCGGGCATATCTTAATGTTCTCCTGGTGCGGCTAAGTGTAGTTGTGCCGAGTTTCAAGGATATGTCTGTATGATTTACAAGACTGCCGTCTGATTCATTCTTTGTTCATTATATCACATGTTTAATGGCCAAGAAATTGACCTGCCTTTTTCTATACAAGTCAGATTGGTTATAAATTTATGACCAAACTATAATTGGTGATTCAACTGTTGAATGTTTGCTTAATGTTTAAGTTACATCCAGATTTAAATCTCCCAAGCTGAATTTTGTGTTCACCTCTTATCTAAGTAATGGGGTCATACTGGATGCAGCATTTTGATAACACACGCAGAGGGAAATAGGAGAGGTTTTGATAAAATAGGGAGAGGGAATGTTTATGAGATTTGGGAGCAATTTCAATTTGTCATTTGGTTTTGGGTATTTTCCAGTGAACTTTTTTGTAATATTGTTTTATTTTCTCACCACCATGCAGGTCAAATTCGAGCACACTCACAATGGGGAGAAGACCTGCTAGGTGTTACCGACAGATTAAAAACAAACCATATCCCAAGTCACGATTTTGTCGTGGTGTCCCCGATCCTAAGATTAGGATCTATGATGTTGGAATGAAAAAGAAAGGAGTTGATGAATTTCCATTCTGTGTCCACCTTGTGAGTTGGGAGAAAGAAAACGTGTCAAGTGAGGCTTTGGAAGCAGCTAGGATTGCCTGCAACAAGTATATGACCAAGTTTGCTGGGAAGGATGCGTTCCATTTGAGGGTCAGGGTGCACCCCTTCCATGTTCTGCGGATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAAACTGGTATGAGAGGTGCATTTGGCAAACCACAAGGAACCTGTGCAAGAGTGGACATCGGTCAGGTTCTCCTTTCAGTTCGCTGCAAGGACAACAATGGTCAGAATGCACAGGAGGCCCTCCGTCGTGCTAAGTTCAAGTTCCCTGGCCGTCAAAAGATCATTGTTAGCAGGAAGTGGGGATTCACCAAATTCAGCCGAGCCGATTATCTGCAGTACAAGGCAGAGAACAAGATTCTTCCAGATGGTGTTAACGCAAAGCTTCTTGGATGCCATGGGCCTCTAGCAAACCGTCAGCCTGGAAGAGCTTTTCTACCTCAAACTGCCTAG

mRNA sequence

ATGACGATTGAAGCAGGTACTGATGATAATCGGGCATATCTTAATGTTCTCCTGGTGCGGCTAAGTGTAGTTGTGCCGAGTTTCAAGGATATGTCAAATTCGAGCACACTCACAATGGGGAGAAGACCTGCTAGGTGTTACCGACAGATTAAAAACAAACCATATCCCAAGTCACGATTTTGTCGTGGTGTCCCCGATCCTAAGATTAGGATCTATGATGTTGGAATGAAAAAGAAAGGAGTTGATGAATTTCCATTCTGTGTCCACCTTGTGAGTTGGGAGAAAGAAAACGTGTCAAGTGAGGCTTTGGAAGCAGCTAGGATTGCCTGCAACAAGTATATGACCAAGTTTGCTGGGAAGGATGCGTTCCATTTGAGGGTCAGGGTGCACCCCTTCCATGTTCTGCGGATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAAACTGGTATGAGAGGTGCATTTGGCAAACCACAAGGAACCTGTGCAAGAGTGGACATCGGTCAGGTTCTCCTTTCAGTTCGCTGCAAGGACAACAATGGTCAGAATGCACAGGAGGCCCTCCGTCGTGCTAAGTTCAAGTTCCCTGGCCGTCAAAAGATCATTGTTAGCAGGAAGTGGGGATTCACCAAATTCAGCCGAGCCGATTATCTGCAGTACAAGGCAGAGAACAAGATTCTTCCAGATGGTGTTAACGCAAAGCTTCTTGGATGCCATGGGCCTCTAGCAAACCGTCAGCCTGGAAGAGCTTTTCTACCTCAAACTGCCTAG

Coding sequence (CDS)

ATGACGATTGAAGCAGGTACTGATGATAATCGGGCATATCTTAATGTTCTCCTGGTGCGGCTAAGTGTAGTTGTGCCGAGTTTCAAGGATATGTCAAATTCGAGCACACTCACAATGGGGAGAAGACCTGCTAGGTGTTACCGACAGATTAAAAACAAACCATATCCCAAGTCACGATTTTGTCGTGGTGTCCCCGATCCTAAGATTAGGATCTATGATGTTGGAATGAAAAAGAAAGGAGTTGATGAATTTCCATTCTGTGTCCACCTTGTGAGTTGGGAGAAAGAAAACGTGTCAAGTGAGGCTTTGGAAGCAGCTAGGATTGCCTGCAACAAGTATATGACCAAGTTTGCTGGGAAGGATGCGTTCCATTTGAGGGTCAGGGTGCACCCCTTCCATGTTCTGCGGATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAAACTGGTATGAGAGGTGCATTTGGCAAACCACAAGGAACCTGTGCAAGAGTGGACATCGGTCAGGTTCTCCTTTCAGTTCGCTGCAAGGACAACAATGGTCAGAATGCACAGGAGGCCCTCCGTCGTGCTAAGTTCAAGTTCCCTGGCCGTCAAAAGATCATTGTTAGCAGGAAGTGGGGATTCACCAAATTCAGCCGAGCCGATTATCTGCAGTACAAGGCAGAGAACAAGATTCTTCCAGATGGTGTTAACGCAAAGCTTCTTGGATGCCATGGGCCTCTAGCAAACCGTCAGCCTGGAAGAGCTTTTCTACCTCAAACTGCCTAG

Protein sequence

MTIEAGTDDNRAYLNVLLVRLSVVVPSFKDMSNSSTLTMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Homology
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BLAST of Spg004168 vs. NCBI nr
Match: XP_008451785.1 (PREDICTED: 60S ribosomal protein L10-like [Cucumis melo] >TYK16331.1 60S ribosomal protein L10-like [Cucumis melo var. makuwa])

HSP 1 Score: 458.8 bits (1179), Expect = 3.2e-125
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0 

Query: 39  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 98
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 99  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 159 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 218
           KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 219 YLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 259
           YL+YKAENKILPDGVNAKLLGCHGPLANRQPGRAFL QTA
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

[Close]
BLAST of Spg004168 vs. NCBI nr
Match: XP_038906131.1 (60S ribosomal protein L10-like [Benincasa hispida])

HSP 1 Score: 457.6 bits (1176), Expect = 7.1e-125
Identity = 217/220 (98.64%), Postives = 219/220 (99.55%), Query Frame = 0 

Query: 39  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 98
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 99  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 159 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 218
           KPQGTCARVDIGQVLLSVRC+DNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCRDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 219 YLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 259
           YL+YKAENKILPDGVNAKLLGCHGPLANRQPGRAFL QTA
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

[Close]
BLAST of Spg004168 vs. NCBI nr
Match: XP_004137249.1 (60S ribosomal protein L10 [Cucumis sativus] >KAE8649248.1 hypothetical protein Csa_015270 [Cucumis sativus])

HSP 1 Score: 455.7 bits (1171), Expect = 2.7e-124
Identity = 216/220 (98.18%), Postives = 218/220 (99.09%), Query Frame = 0 

Query: 39  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 98
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 99  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 159 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 218
           KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 219 YLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 259
           YL+YKAENKILPDGVNAKLLGCHGPLANRQPGRAFL Q A
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQNA 220

[Close]
BLAST of Spg004168 vs. NCBI nr
Match: XP_022931333.1 (60S ribosomal protein L10-like [Cucurbita moschata] >XP_022985026.1 60S ribosomal protein L10-like [Cucurbita maxima] >XP_023553543.1 60S ribosomal protein L10-like [Cucurbita pepo subsp. pepo] >KAG6577053.1 60S ribosomal protein L10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 453.4 bits (1165), Expect = 1.3e-123
Identity = 215/220 (97.73%), Postives = 218/220 (99.09%), Query Frame = 0 

Query: 39  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 98
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 99  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 159 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 218
           KP GTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA+
Sbjct: 121 KPLGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180

Query: 219 YLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 259
           YL+YKAENKILPDGVNAKLLGCHGPLANRQPGRAFL QTA
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

[Close]
BLAST of Spg004168 vs. NCBI nr
Match: XP_022942135.1 (60S ribosomal protein L10-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 453.0 bits (1164), Expect = 1.7e-123
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 0 

Query: 38  TMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKEN 97
           TMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKEN
Sbjct: 21  TMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKEN 80

Query: 98  VSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF 157
           VSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF
Sbjct: 81  VSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF 140

Query: 158 GKPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA 217
           GKPQGTCARV IGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA
Sbjct: 141 GKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA 200

Query: 218 DYLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 259
           DYL++KAENKILPDGVNAKLLGCHGPLANRQPGRAFL Q A
Sbjct: 201 DYLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 241

[Close]
BLAST of Spg004168 vs. ExPASy Swiss-Prot
Match: Q9M5M7 (60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 7.9e-119
Identity = 203/220 (92.27%), Postives = 209/220 (95.00%), Query Frame = 0 

Query: 39  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 98
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 99  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 159 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 218
           KPQG CARV IGQVLLSVRCKDNN  NAQEALRRAKFKFPGRQKIIVSRKWGFTK +RAD
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKINRAD 180

Query: 219 YLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 259
           Y + K+EN+ILPDGVNAKLLGCHG LANR+PGRAF+   A
Sbjct: 181 YPRLKSENRILPDGVNAKLLGCHGRLANRKPGRAFIDAVA 220

[Close]
BLAST of Spg004168 vs. ExPASy Swiss-Prot
Match: Q9SPB3 (60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 1.3e-118
Identity = 198/216 (91.67%), Postives = 210/216 (97.22%), Query Frame = 0 

Query: 39  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 98
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 99  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 159 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 218
           KPQGTCARV IGQVLLSVRCKD N  +AQEALRRAKFKFP RQKIIVSRKWGFTKF+R D
Sbjct: 121 KPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTD 180

Query: 219 YLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL 255
           Y+++K++N+ILPDGVNAKLLGCHGPLANRQPG+AF+
Sbjct: 181 YIKWKSQNRILPDGVNAKLLGCHGPLANRQPGKAFI 216

[Close]
BLAST of Spg004168 vs. ExPASy Swiss-Prot
Match: P93847 (60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 2.5e-117
Identity = 201/216 (93.06%), Postives = 207/216 (95.83%), Query Frame = 0 

Query: 39  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 98
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 99  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 159 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 218
           KPQG CARV IGQVLLSVRCKD N  +AQEALRRAKFKFPGRQKIIVSRKWGFTKFSR D
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180

Query: 219 YLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL 255
           YL+YK+EN+I+PDGVNAKLLG HGPLA RQPGRAFL
Sbjct: 181 YLKYKSENRIVPDGVNAKLLGNHGPLAARQPGRAFL 216

[Close]
BLAST of Spg004168 vs. ExPASy Swiss-Prot
Match: Q93VT9 (60S ribosomal protein L10-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 2.5e-112
Identity = 190/217 (87.56%), Postives = 202/217 (93.09%), Query Frame = 0 

Query: 39  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 98
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 99  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 159 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 218
           K  GTCARV IGQVLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 219 YLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP 256
           + + + E +++PDGVNAK L CHGPLANRQPG AFLP
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLP 217

[Close]
BLAST of Spg004168 vs. ExPASy Swiss-Prot
Match: A2ZCQ7 (60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica OX=39946 GN=SC34 PE=2 SV=2)

HSP 1 Score: 406.4 bits (1043), Expect = 2.5e-112
Identity = 191/219 (87.21%), Postives = 207/219 (94.52%), Query Frame = 0 

Query: 39  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 98
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60

Query: 99  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 159 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 218
           KPQGTCARVDIGQVLLSVRCK++N ++A+EALRRAKFKFPGRQKII SRKWGFTKF+R +
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREE 180

Query: 219 YLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQT 258
           Y++ KAE +I+ DGVNA+LLG HG LA R PG+AFL +T
Sbjct: 181 YVKLKAEGRIMSDGVNAQLLGSHGRLAKRAPGKAFLAET 219

[Close]
BLAST of Spg004168 vs. ExPASy TrEMBL
Match: A0A5D3CWP6 (60S ribosomal protein L10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001130 PE=3 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.5e-125
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0 

Query: 39  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 98
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 99  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 159 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 218
           KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 219 YLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 259
           YL+YKAENKILPDGVNAKLLGCHGPLANRQPGRAFL QTA
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

[Close]
BLAST of Spg004168 vs. ExPASy TrEMBL
Match: A0A1S3BT36 (60S ribosomal protein L10-like OS=Cucumis melo OX=3656 GN=LOC103492967 PE=3 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.5e-125
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0 

Query: 39  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 98
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 99  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 159 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 218
           KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 219 YLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 259
           YL+YKAENKILPDGVNAKLLGCHGPLANRQPGRAFL QTA
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

[Close]
BLAST of Spg004168 vs. ExPASy TrEMBL
Match: A0A6J1J6Y1 (60S ribosomal protein L10-like OS=Cucurbita maxima OX=3661 GN=LOC111483117 PE=3 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.5e-124
Identity = 215/220 (97.73%), Postives = 218/220 (99.09%), Query Frame = 0 

Query: 39  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 98
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 99  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 159 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 218
           KP GTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA+
Sbjct: 121 KPLGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180

Query: 219 YLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 259
           YL+YKAENKILPDGVNAKLLGCHGPLANRQPGRAFL QTA
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

[Close]
BLAST of Spg004168 vs. ExPASy TrEMBL
Match: A0A6J1EY90 (60S ribosomal protein L10-like OS=Cucurbita moschata OX=3662 GN=LOC111437559 PE=3 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.5e-124
Identity = 215/220 (97.73%), Postives = 218/220 (99.09%), Query Frame = 0 

Query: 39  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 98
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 99  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 159 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 218
           KP GTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA+
Sbjct: 121 KPLGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180

Query: 219 YLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 259
           YL+YKAENKILPDGVNAKLLGCHGPLANRQPGRAFL QTA
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

[Close]
BLAST of Spg004168 vs. ExPASy TrEMBL
Match: A0A6J1FVN9 (60S ribosomal protein L10-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447292 PE=3 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 8.5e-124
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 0 

Query: 38  TMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKEN 97
           TMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKEN
Sbjct: 21  TMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKEN 80

Query: 98  VSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF 157
           VSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF
Sbjct: 81  VSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF 140

Query: 158 GKPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA 217
           GKPQGTCARV IGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA
Sbjct: 141 GKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA 200

Query: 218 DYLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 259
           DYL++KAENKILPDGVNAKLLGCHGPLANRQPGRAFL Q A
Sbjct: 201 DYLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 241

[Close]
BLAST of Spg004168 vs. TAIR 10
Match: AT1G14320.1 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 406.4 bits (1043), Expect = 1.7e-113
Identity = 190/217 (87.56%), Postives = 202/217 (93.09%), Query Frame = 0 

Query: 39  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 98
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 99  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 159 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 218
           K  GTCARV IGQVLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 219 YLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP 256
           + + + E +++PDGVNAK L CHGPLANRQPG AFLP
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLP 217

[Close]
BLAST of Spg004168 vs. TAIR 10
Match: AT1G26910.1 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 404.4 bits (1038), Expect = 6.6e-113
Identity = 190/216 (87.96%), Postives = 201/216 (93.06%), Query Frame = 0 

Query: 39  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 98
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60

Query: 99  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 159 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 218
           K  GTCARV IGQVLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 219 YLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL 255
           Y + + E +I+PDGVNAK L CHGPLANRQPG AFL
Sbjct: 181 YTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFL 216

[Close]
BLAST of Spg004168 vs. TAIR 10
Match: AT1G66580.1 (senescence associated gene 24 )

HSP 1 Score: 402.1 bits (1032), Expect = 3.3e-112
Identity = 190/220 (86.36%), Postives = 203/220 (92.27%), Query Frame = 0 

Query: 39  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 98
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 99  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 159 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 218
           K  GTCARV IGQVLLSVRCKDN+G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RA+
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDNHGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAE 180

Query: 219 YLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 259
           Y + +A  +I+PDGVNAK L  HGPLANRQPG AF+  T+
Sbjct: 181 YTKLRAMKRIVPDGVNAKFLSNHGPLANRQPGSAFISATS 220

[Close]
BLAST of Spg004168 vs. TAIR 10
Match: AT1G14320.2 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 275.8 bits (704), Expect = 3.6e-74
Identity = 139/217 (64.06%), Postives = 150/217 (69.12%), Query Frame = 0 

Query: 39  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 98
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 99  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYM                                            
Sbjct: 61  SSEALEAARIACNKYM-------------------------------------------- 120

Query: 159 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 218
                        VLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 -------------VLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 160

Query: 219 YLQYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP 256
           + + + E +++PDGVNAK L CHGPLANRQPG AFLP
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLP 160

The following BLAST results are available for this feature:
BLAST of Spg004168 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008451785.13.2e-12599.09PREDICTED: 60S ribosomal protein L10-like [Cucumis melo] >TYK16331.1 60S ribosom... [more]
XP_038906131.17.1e-12598.6460S ribosomal protein L10-like [Benincasa hispida][more]
XP_004137249.12.7e-12498.1860S ribosomal protein L10 [Cucumis sativus] >KAE8649248.1 hypothetical protein C... [more]
XP_022931333.11.3e-12397.7360S ribosomal protein L10-like [Cucurbita moschata] >XP_022985026.1 60S ribosoma... [more]
XP_022942135.11.7e-12397.2960S ribosomal protein L10-like isoform X1 [Cucurbita moschata][more]
BLAST of Spg004168 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M5M77.9e-11992.2760S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1[more]
Q9SPB31.3e-11891.6760S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1[more]
P938472.5e-11793.0660S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1[more]
Q93VT92.5e-11287.5660S ribosomal protein L10-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10A PE=1 SV=1[more]
A2ZCQ72.5e-11287.2160S ribosomal protein L10-1 OS=Oryza sativa subsp. indica OX=39946 GN=SC34 PE=2 ... [more]
BLAST of Spg004168 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CWP61.5e-12599.0960S ribosomal protein L10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3BT361.5e-12599.0960S ribosomal protein L10-like OS=Cucumis melo OX=3656 GN=LOC103492967 PE=3 SV=1[more]
A0A6J1J6Y16.5e-12497.7360S ribosomal protein L10-like OS=Cucurbita maxima OX=3661 GN=LOC111483117 PE=3 ... [more]
A0A6J1EY906.5e-12497.7360S ribosomal protein L10-like OS=Cucurbita moschata OX=3662 GN=LOC111437559 PE=... [more]
A0A6J1FVN98.5e-12497.2960S ribosomal protein L10-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
BLAST of Spg004168 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G14320.11.7e-11387.56Ribosomal protein L16p/L10e family protein [more]
AT1G26910.16.6e-11387.96Ribosomal protein L16p/L10e family protein [more]
AT1G66580.13.3e-11286.36senescence associated gene 24 [more]
AT1G14320.23.6e-7464.06Ribosomal protein L16p/L10e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016180Ribosomal protein L10e/L16PFAMPF00252Ribosomal_L16coord: 50..204
e-value: 2.3E-36
score: 124.7
IPR016180Ribosomal protein L10e/L16CDDcd01433Ribosomal_L16_L10ecoord: 79..204
e-value: 4.86136E-46
score: 148.023
IPR036920Ribosomal protein L10e/L16 superfamilyGENE3D3.90.1170.10Ribosomal protein L10e/L16coord: 39..253
e-value: 9.3E-117
score: 390.2
IPR036920Ribosomal protein L10e/L16 superfamilySUPERFAMILY54686Ribosomal protein L16p/L10ecoord: 42..211
IPR001197Ribosomal protein L10eTIGRFAMTIGR00279TIGR00279coord: 39..212
e-value: 1.4E-77
score: 257.1
IPR001197Ribosomal protein L10ePANTHERPTHR1172660S RIBOSOMAL PROTEIN L10coord: 39..255
NoneNo IPR availablePANTHERPTHR11726:SF4260S RIBOSOMAL PROTEIN L10-LIKEcoord: 39..255
IPR018255Ribosomal protein L10e, conserved sitePROSITEPS01257RIBOSOMAL_L10Ecoord: 146..167

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg004168.1Spg004168.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome