Spg004044 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg004044
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Locationscaffold4: 1315755 .. 1318857 (-)
RNA-Seq ExpressionSpg004044
SyntenySpg004044
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATGAAGTATGTCAACTTAATCTAACCCCATAGATATCGAATTGTTTCCTTGGAATTGCTTTTCTTATACAAAGCTTTTCTTTACGCAATATTGTATGTGCAGGGGCTGATGTGTCCTATAACTATTAGCTAATTTTGAACGTTGCAATCAACTATATTGGTTATGAACTATTTTTAGTTTCTTTTTATTTAAATAAGGTTTTGAACTATGTTTATTCAGTTTGGCAGCTTCAGGACTCAGAAATATTCTACACGTATGTGATCATCAATAATCTTGACATATATCACACTGAATGCCGTGATTATTGATGGATGTGGAGTATGCCAAGTTTTATGACTGTGATTTCTCTGTTTTGCATGATGTGTTGGTAAGAGTGGGGTTCAAACGTAAAAATGCAACCTGTGTGCGCACATGTTTTATTTCCATAATTTTGGAACTATTTTGGCCACTGCTATATTAAATGTGCTGTCTGAACTATTTCTTGTGCCTTCAATCCAGTTGCAAAAGGTGCCAAAAGTTTAAGCAGGAATCTTAGCGATGAGCTCATTGATATTGACGCTGAAGGTAAGGTAATGTATTTTTTTTGTTCGTTTCCTTAGTGCATCACCCATTCTTTCCTTGTATTTCATTTTCTCTTTTCCTTTTTGCTATCAACACATCTGGTCTTTTTTCTTTTACCGTATTTATAGATTGTGCATGTGAAGTGTCTGAGATTTTTTTCCCACCCCTCCTTTCCTTCGAATGGTTTGACTCCATGGAAAGCACCATTTAGTGTAACATGTATGTCATCTGAAATTTGTTTTCCTTATTTACCTCTAATCCAGTTGGAAAAGGTGCCGACACTGATAGTTTCTCTGAAAATGTCAGCTACGAAGTCATTCACATTGATTCTGAAGGTAAGGCTATTTTCTGATTTTTTATTCTCACTAGTCAGCACTCACATTGCACCTGTTCTTTTAAAGCTTTAAAATAATCCTCGACAATAATGTTTTAAAATTATTTAACAATCTTGTTTTATTTTTCAGCATCACTCCACTTCACAGTTGAAAATGTTTTCTTTTGACCAAATCCAAGATCTAAGAGCTATTAAAAGTACAGAACAGTAATTTTTCAATGTGCAATGAAAGAACAAATGAGATTGATCTTCACCTGCTAAGAGGCATGAAACACACGTATGAACAATCCATGGAAAAATATTCACCTGGTTTCTTGAACCTTTTGATTTTCATCATGCCTCGAACCATCTTCTATCTACTTTGGGAAGAACAGACAAAACTTTAACTAAAAATGTCATTGAAAAGCCATCCACAGAGTCTCATTTCTGTATGCACTTCATTAATTGTGACCAATAAACCTCGAAGATCTTCTATTTCTTCCTTTTGCAAATTCCTCCTAGCCCAAATCATCCGCAAGCTAAATTTTAGAGTCCCTCTATAAAATCCTGTTTCTTATGAAATAAAGATGTGGTTGCTAGAGAAAGATGGAGCATTTGTGAAAAAGAAGGATACTGTCTTTTGTAACTACTCATCTTCCATGGCTCTAGCCAGTTAACTGCAAGCTCCTTGTGTTTAGTTTTTATGTGTCTATCTCAGTAGGACCCACGCTCCATGTATGCATATTCTTTTCTTTCTTTTTAAATTTGTTTGTCTGACTGAATTTTAAACCTCTCATTCAGTTGGCAACTCTACTCTAAATACAAGTCATCAAGTTTGCATTGGACCAACTGATCTCGATCCCGAAGATGCATGTGCAGGTGATCCTATTTTTTTTTTTTTTGAATATTTAAATATATTCTATGTTTGATCCTTTCTCCTGATGGTTAAGTTGGATAAGAAGAAAACTGTTCTAGAAAGATGTAGTACTGTGGGTTATTTGATGCTTCTGTTACAGCTTATATAAGTGCATATCTTTTGTTGCATTTGCTGTAGATTGGTCACTTGAAGGTGGTGATTCTACAAAGCAGGAAATTTCTGAAACCAATGATGCTCTTTTGCTTTCTCGTTCTTCAACTAATGAGGTGGACACTCCAGCTTATTGTGAATTTTGAGTTTGCCCCAACTTGATATTATTTCAATCATGTAACAAATATTTAATTCATATAATCTTTATATGGGATGGACTTATGCAAGGTTCCTCCTTACCTGTATTGATAATTAGAGAGAATGACACTTAAGTAATACAAAACCCTCAGACAATTCAAAAGGATTGGTAATCTCTCTCACCTCTCTGAGCTACTAGAGCAAAGCTAACAAAAAGCATAAAAACATTCTTACAAACCTGTCACCAAGAGGAAAAATTAGGGCTACTAGAGGTATTAGGCAAGGGGATCCGCTCTCCCCCTTCCTTTTCACTATAGTGGCTGATTCTTTCGATAGATTCATTAATCTTTGTAAGGAGAGACTTTTCTTGAAAGGCTTTAGTATTGGTAGTGAAGAGGTCGACGTTTCTCATATTCAATTTGCGGATGACACTTCGATTTTTAGCGAAGGTTCTAGCTCAATAGTTCAGAATTGGAAGACTTTATTGGAGTTCTTTGAAAAAGCCTCGGGTCTGTCCATCAATATGCATAAATCCTCCTTAATTGGTATCAATGTTGAGAATGAGGAAGTGAGTAAAATGGCTCAGGTGGTTGGATGCAAAGCTGAAGGTCTCCCTTTTCCCTATTTGGGAGTCACGATTGGAGGTAAGGCCAGAGTGGCCTCGTTCTGGGATCCAATGTACGATAAAATTCGTGGTAAGTTGGCTATGTGGAGGGGCTTTCCCATCTCGAAAGGTGGGAGAGTTACCCTTATCAAAGCTGTCTTGTCTAGCGTGCCTACGTATTTCTTCTCTGTTTTTAGAGCCCCCCTTCAGGTGTGTAAGAACATCGAGGCCTTACTTATAAATTTTATGTGGAAGGGCGTTGATTTGGCTAAAGGCAGTCACTTAGTTAATTGGGGCAAAGTTACCACCCGTAGATCTTTGGGAGGCTTGGGGATTGACAATTTGAGGGCCAAAAATCTTGCCCTTTTAGCTAAATGGCTGTGGAGGTTTGAGAAAGAGAAGTCTGCTTTGTGGCGTGTGGTGGTGAAGACAAATTTGGTGACAACTTCATGA

mRNA sequence

ATGGAAAATGAAGGGCTGATGACTCAGAAATATTCTACACTTGCAAAAGGTGCCAAAAGTTTAAGCAGGAATCTTAGCGATGAGCTCATTGATATTGACGCTGAAGTTGGAAAAGGTGCCGACACTGATAGTTTCTCTGAAAATGTCAGCTACGAAGTCATTCACATTGATTCTGAAGAGAAAGATGGAGCATTTGTGAAAAAGAAGGATACTGTCTTTTGTAACTACTCATCTTCCATGGCTCTAGCCATTGGCAACTCTACTCTAAATACAAGTCATCAAGTTTGCATTGGACCAACTGATCTCGATCCCGAAGATGCATGTGCAGATTGGTCACTTGAAGGTGGTGATTCTACAAAGCAGGAAATTTCTGAAACCAATGATGCTCTTTTGCTTTCTCGTTCTTCAACTAATGAGGTGTGTAAGAACATCGAGGCCTTACTTATAAATTTTATGTGGAAGGGCGTTGATTTGGCTAAAGGCAGTCACTTAGTTAATTGGGGCAAAGTTACCACCCGTAGATCTTTGGGAGGCTTGGGGATTGACAATTTGAGGGCCAAAAATCTTGCCCTTTTAGCTAAATGGCTGTGGAGGTTTGAGAAAGAGAAGTCTGCTTTGTGGCGTGTGGTGGTGAAGACAAATTTGGTGACAACTTCATGA

Coding sequence (CDS)

ATGGAAAATGAAGGGCTGATGACTCAGAAATATTCTACACTTGCAAAAGGTGCCAAAAGTTTAAGCAGGAATCTTAGCGATGAGCTCATTGATATTGACGCTGAAGTTGGAAAAGGTGCCGACACTGATAGTTTCTCTGAAAATGTCAGCTACGAAGTCATTCACATTGATTCTGAAGAGAAAGATGGAGCATTTGTGAAAAAGAAGGATACTGTCTTTTGTAACTACTCATCTTCCATGGCTCTAGCCATTGGCAACTCTACTCTAAATACAAGTCATCAAGTTTGCATTGGACCAACTGATCTCGATCCCGAAGATGCATGTGCAGATTGGTCACTTGAAGGTGGTGATTCTACAAAGCAGGAAATTTCTGAAACCAATGATGCTCTTTTGCTTTCTCGTTCTTCAACTAATGAGGTGTGTAAGAACATCGAGGCCTTACTTATAAATTTTATGTGGAAGGGCGTTGATTTGGCTAAAGGCAGTCACTTAGTTAATTGGGGCAAAGTTACCACCCGTAGATCTTTGGGAGGCTTGGGGATTGACAATTTGAGGGCCAAAAATCTTGCCCTTTTAGCTAAATGGCTGTGGAGGTTTGAGAAAGAGAAGTCTGCTTTGTGGCGTGTGGTGGTGAAGACAAATTTGGTGACAACTTCATGA

Protein sequence

MENEGLMTQKYSTLAKGAKSLSRNLSDELIDIDAEVGKGADTDSFSENVSYEVIHIDSEEKDGAFVKKKDTVFCNYSSSMALAIGNSTLNTSHQVCIGPTDLDPEDACADWSLEGGDSTKQEISETNDALLLSRSSTNEVCKNIEALLINFMWKGVDLAKGSHLVNWGKVTTRRSLGGLGIDNLRAKNLALLAKWLWRFEKEKSALWRVVVKTNLVTTS
Homology
[Close]
BLAST of Spg004044 vs. NCBI nr
Match: XP_008455146.1 (PREDICTED: probable ubiquitin-like-specific protease 2A isoform X2 [Cucumis melo] >KAA0031447.1 putative ubiquitin-like-specific protease 2A isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 134.0 bits (336), Expect = 1.5e-27
Identity = 79/124 (63.71%), Postives = 87/124 (70.16%), Query Frame = 0 

Query: 16  KGAKSLSRNLSDELIDIDAEVGKGADTDSFSENVSYEVIHIDSEEKDGAFVKKKDTVFCN 75
           KGAKS+SRNLSDELIDIDAEVGKGA+TDSFSE++SYE+IHIDSE                
Sbjct: 70  KGAKSVSRNLSDELIDIDAEVGKGANTDSFSEDISYELIHIDSE---------------- 129

Query: 76  YSSSMALAIGNSTLNTSHQVCIGPTDLDPEDACADWSLEGGDSTKQEISETNDALLLSRS 135
                   +  STLNTSHQ+  GP DL+ ED CAD SLEGG S KQEI ETND LL SRS
Sbjct: 130 --------VSISTLNTSHQISPGPIDLNAEDTCADGSLEGGGSMKQEILETND-LLRSRS 168

Query: 136 STNE 140
           STNE
Sbjct: 190 STNE 168

[Close]
BLAST of Spg004044 vs. NCBI nr
Match: XP_008455144.1 (PREDICTED: probable ubiquitin-like-specific protease 2A isoform X1 [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 1.5e-27
Identity = 79/124 (63.71%), Postives = 87/124 (70.16%), Query Frame = 0 

Query: 16  KGAKSLSRNLSDELIDIDAEVGKGADTDSFSENVSYEVIHIDSEEKDGAFVKKKDTVFCN 75
           KGAKS+SRNLSDELIDIDAEVGKGA+TDSFSE++SYE+IHIDSE                
Sbjct: 70  KGAKSVSRNLSDELIDIDAEVGKGANTDSFSEDISYELIHIDSE---------------- 129

Query: 76  YSSSMALAIGNSTLNTSHQVCIGPTDLDPEDACADWSLEGGDSTKQEISETNDALLLSRS 135
                   +  STLNTSHQ+  GP DL+ ED CAD SLEGG S KQEI ETND LL SRS
Sbjct: 130 --------VSISTLNTSHQISPGPIDLNAEDTCADGSLEGGGSMKQEILETND-LLRSRS 168

Query: 136 STNE 140
           STNE
Sbjct: 190 STNE 168

[Close]
BLAST of Spg004044 vs. NCBI nr
Match: XP_038888441.1 (probable ubiquitin-like-specific protease 2A isoform X3 [Benincasa hispida])

HSP 1 Score: 119.8 bits (299), Expect = 3.0e-23
Identity = 75/126 (59.52%), Postives = 83/126 (65.87%), Query Frame = 0 

Query: 14  LAKGAKSLSRNLSDELIDIDAEVGKGADTDSFSENVSYEVIHIDSEEKDGAFVKKKDTVF 73
           +AKGA+S+SRNLSD  I IDAEVGK A+TDSFSE+VS E+IH DSE              
Sbjct: 13  VAKGAESVSRNLSDVFIVIDAEVGKSANTDSFSEDVSNELIHNDSE-------------- 72

Query: 74  CNYSSSMALAIGNSTLNTSHQVCIGPTDLDPEDACADWSLEGGDSTKQEISETNDALLLS 133
                     +  STLNTSHQ+  GPTDLD ED CAD SLEG  STKQEI ETND  LLS
Sbjct: 73  ----------VSISTLNTSHQISPGPTDLDTEDTCADRSLEGSGSTKQEIFETNDQ-LLS 113

Query: 134 RSSTNE 140
            SSTNE
Sbjct: 133 CSSTNE 113

[Close]
BLAST of Spg004044 vs. NCBI nr
Match: XP_038888439.1 (probable ubiquitin-like-specific protease 2A isoform X1 [Benincasa hispida])

HSP 1 Score: 119.4 bits (298), Expect = 3.9e-23
Identity = 75/125 (60.00%), Postives = 82/125 (65.60%), Query Frame = 0 

Query: 15  AKGAKSLSRNLSDELIDIDAEVGKGADTDSFSENVSYEVIHIDSEEKDGAFVKKKDTVFC 74
           AKGA+S+SRNLSD  I IDAEVGK A+TDSFSE+VS E+IH DSE               
Sbjct: 67  AKGAESVSRNLSDVFIVIDAEVGKSANTDSFSEDVSNELIHNDSE--------------- 126

Query: 75  NYSSSMALAIGNSTLNTSHQVCIGPTDLDPEDACADWSLEGGDSTKQEISETNDALLLSR 134
                    +  STLNTSHQ+  GPTDLD ED CAD SLEG  STKQEI ETND  LLS 
Sbjct: 127 ---------VSISTLNTSHQISPGPTDLDTEDTCADRSLEGSGSTKQEIFETNDQ-LLSC 166

Query: 135 SSTNE 140
           SSTNE
Sbjct: 187 SSTNE 166

[Close]
BLAST of Spg004044 vs. NCBI nr
Match: XP_038888442.1 (uncharacterized protein LOC120078284 isoform X4 [Benincasa hispida])

HSP 1 Score: 119.4 bits (298), Expect = 3.9e-23
Identity = 75/125 (60.00%), Postives = 82/125 (65.60%), Query Frame = 0 

Query: 15  AKGAKSLSRNLSDELIDIDAEVGKGADTDSFSENVSYEVIHIDSEEKDGAFVKKKDTVFC 74
           AKGA+S+SRNLSD  I IDAEVGK A+TDSFSE+VS E+IH DSE               
Sbjct: 67  AKGAESVSRNLSDVFIVIDAEVGKSANTDSFSEDVSNELIHNDSE--------------- 126

Query: 75  NYSSSMALAIGNSTLNTSHQVCIGPTDLDPEDACADWSLEGGDSTKQEISETNDALLLSR 134
                    +  STLNTSHQ+  GPTDLD ED CAD SLEG  STKQEI ETND  LLS 
Sbjct: 127 ---------VSISTLNTSHQISPGPTDLDTEDTCADRSLEGSGSTKQEIFETNDQ-LLSC 166

Query: 135 SSTNE 140
           SSTNE
Sbjct: 187 SSTNE 166

[Close]
BLAST of Spg004044 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.0e-07
Identity = 25/73 (34.25%), Postives = 42/73 (57.53%), Query Frame = 0 

Query: 140 VCKNIEALLINFMWKGVDLAKGSHLVNWGKVTTRRSLGGLGIDNLRAKNLALLAKWLWRF 199
           +   ++ L   F+W      K  HLV W KV + +  GGLG+   ++ N AL++K  WR 
Sbjct: 62  ILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRL 121

Query: 200 EKEKSALWRVVVK 213
            +EK++LW +V++
Sbjct: 122 LQEKNSLWTLVLQ 134

[Close]
BLAST of Spg004044 vs. ExPASy TrEMBL
Match: A0A5A7SPN7 (Putative ubiquitin-like-specific protease 2A isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G002040 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 7.4e-28
Identity = 79/124 (63.71%), Postives = 87/124 (70.16%), Query Frame = 0 

Query: 16  KGAKSLSRNLSDELIDIDAEVGKGADTDSFSENVSYEVIHIDSEEKDGAFVKKKDTVFCN 75
           KGAKS+SRNLSDELIDIDAEVGKGA+TDSFSE++SYE+IHIDSE                
Sbjct: 70  KGAKSVSRNLSDELIDIDAEVGKGANTDSFSEDISYELIHIDSE---------------- 129

Query: 76  YSSSMALAIGNSTLNTSHQVCIGPTDLDPEDACADWSLEGGDSTKQEISETNDALLLSRS 135
                   +  STLNTSHQ+  GP DL+ ED CAD SLEGG S KQEI ETND LL SRS
Sbjct: 130 --------VSISTLNTSHQISPGPIDLNAEDTCADGSLEGGGSMKQEILETND-LLRSRS 168

Query: 136 STNE 140
           STNE
Sbjct: 190 STNE 168

[Close]
BLAST of Spg004044 vs. ExPASy TrEMBL
Match: A0A1S3C1G7 (probable ubiquitin-like-specific protease 2A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495387 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 7.4e-28
Identity = 79/124 (63.71%), Postives = 87/124 (70.16%), Query Frame = 0 

Query: 16  KGAKSLSRNLSDELIDIDAEVGKGADTDSFSENVSYEVIHIDSEEKDGAFVKKKDTVFCN 75
           KGAKS+SRNLSDELIDIDAEVGKGA+TDSFSE++SYE+IHIDSE                
Sbjct: 70  KGAKSVSRNLSDELIDIDAEVGKGANTDSFSEDISYELIHIDSE---------------- 129

Query: 76  YSSSMALAIGNSTLNTSHQVCIGPTDLDPEDACADWSLEGGDSTKQEISETNDALLLSRS 135
                   +  STLNTSHQ+  GP DL+ ED CAD SLEGG S KQEI ETND LL SRS
Sbjct: 130 --------VSISTLNTSHQISPGPIDLNAEDTCADGSLEGGGSMKQEILETND-LLRSRS 168

Query: 136 STNE 140
           STNE
Sbjct: 190 STNE 168

[Close]
BLAST of Spg004044 vs. ExPASy TrEMBL
Match: A0A1S3C0Z2 (probable ubiquitin-like-specific protease 2A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495387 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 7.4e-28
Identity = 79/124 (63.71%), Postives = 87/124 (70.16%), Query Frame = 0 

Query: 16  KGAKSLSRNLSDELIDIDAEVGKGADTDSFSENVSYEVIHIDSEEKDGAFVKKKDTVFCN 75
           KGAKS+SRNLSDELIDIDAEVGKGA+TDSFSE++SYE+IHIDSE                
Sbjct: 70  KGAKSVSRNLSDELIDIDAEVGKGANTDSFSEDISYELIHIDSE---------------- 129

Query: 76  YSSSMALAIGNSTLNTSHQVCIGPTDLDPEDACADWSLEGGDSTKQEISETNDALLLSRS 135
                   +  STLNTSHQ+  GP DL+ ED CAD SLEGG S KQEI ETND LL SRS
Sbjct: 130 --------VSISTLNTSHQISPGPIDLNAEDTCADGSLEGGGSMKQEILETND-LLRSRS 168

Query: 136 STNE 140
           STNE
Sbjct: 190 STNE 168

[Close]
BLAST of Spg004044 vs. ExPASy TrEMBL
Match: A0A0A0K633 (ULP_PROTEASE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G065160 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 6.1e-22
Identity = 71/124 (57.26%), Postives = 78/124 (62.90%), Query Frame = 0 

Query: 16  KGAKSLSRNLSDELIDIDAEVGKGADTDSFSENVSYEVIHIDSEEKDGAFVKKKDTVFCN 75
           KGAKS+SRNLSDELIDIDAEVGK A+ DSFSE+VS E+IHIDSE                
Sbjct: 70  KGAKSVSRNLSDELIDIDAEVGKSANIDSFSEDVSDELIHIDSE---------------- 129

Query: 76  YSSSMALAIGNSTLNTSHQVCIGPTDLDPEDACADWSLEGGDSTKQEISETNDALLLSRS 135
                            HQ+  GPTDL+ ED CAD  LEGG S KQEI ETND +LLSRS
Sbjct: 130 ----------------GHQISPGPTDLNAEDTCADTPLEGGGSMKQEILETND-ILLSRS 160

Query: 136 STNE 140
           STNE
Sbjct: 190 STNE 160

[Close]
BLAST of Spg004044 vs. ExPASy TrEMBL
Match: A0A5D3C6D6 (Putative ubiquitin-like-specific protease 2A isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002070 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.4e-15
Identity = 64/125 (51.20%), Postives = 69/125 (55.20%), Query Frame = 0 

Query: 16  KGAKSLSRNLSDELIDIDAEVGKGADTDSFSENVSYEVIHIDSEEKDGAFVKKKDTVFCN 75
           KGAKS+SRNLSDELIDIDAEVGKGA+TDSFSE++SYE+IHIDSE                
Sbjct: 70  KGAKSVSRNLSDELIDIDAEVGKGANTDSFSEDISYELIHIDSE---------------- 129

Query: 76  YSSSMALAIGNSTLNTSHQVCIGPTDLDPEDACADWSLEGGDSTKQEISETNDALLLSRS 135
                                             D SLEGG S KQEI ETND LL SRS
Sbjct: 130 ----------------------------------DGSLEGGGSMKQEILETND-LLRSRS 143

Query: 136 STNEV 141
           STNEV
Sbjct: 190 STNEV 143

[Close]
BLAST of Spg004044 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 4.9e-08
Identity = 27/74 (36.49%), Postives = 41/74 (55.41%), Query Frame = 0 

Query: 140 VCKNIEALLINFMWKGVDLAKGSHLVNWGKVTTRRSLGGLGIDNLRAKNLALLAKWLWRF 199
           VCK I ++L +F W+    AKG H   W  ++  ++ GG+G  ++ A NLALL K +WR 
Sbjct: 17  VCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQMWRM 76

Query: 200 EKEKSALWRVVVKT 214
                +L   V K+
Sbjct: 77  LSRPESLMAKVFKS 90

The following BLAST results are available for this feature:
BLAST of Spg004044 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455146.11.5e-2763.71PREDICTED: probable ubiquitin-like-specific protease 2A isoform X2 [Cucumis melo... [more]
XP_008455144.11.5e-2763.71PREDICTED: probable ubiquitin-like-specific protease 2A isoform X1 [Cucumis melo... [more]
XP_038888441.13.0e-2359.52probable ubiquitin-like-specific protease 2A isoform X3 [Benincasa hispida][more]
XP_038888439.13.9e-2360.00probable ubiquitin-like-specific protease 2A isoform X1 [Benincasa hispida][more]
XP_038888442.13.9e-2360.00uncharacterized protein LOC120078284 isoform X4 [Benincasa hispida][more]
BLAST of Spg004044 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P0C2F69.0e-0734.25Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
BLAST of Spg004044 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SPN77.4e-2863.71Putative ubiquitin-like-specific protease 2A isoform X2 OS=Cucumis melo var. mak... [more]
A0A1S3C1G77.4e-2863.71probable ubiquitin-like-specific protease 2A isoform X2 OS=Cucumis melo OX=3656 ... [more]
A0A1S3C0Z27.4e-2863.71probable ubiquitin-like-specific protease 2A isoform X1 OS=Cucumis melo OX=3656 ... [more]
A0A0A0K6336.1e-2257.26ULP_PROTEASE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G06516... [more]
A0A5D3C6D61.4e-1551.20Putative ubiquitin-like-specific protease 2A isoform X2 OS=Cucumis melo var. mak... [more]
BLAST of Spg004044 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G29090.14.9e-0836.49Ribonuclease H-like superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg004044.1Spg004044.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity