Spg004005 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg004005
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	MADS-box protein JOINTLESS-like isoform X2
Location	scaffold4: 1182000 .. 1183287 (-)
RNA-Seq Expression	Spg004005
Synteny	Spg004005

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCACATCGTTCACGATAACGCCCGCACTATCCATATTTTATGGGAGGATATTTTGTCTCTTGGCTGCTTTTTGGTCTTCAGTTTCTAGCGACTTTTCCAATTATAATGCCTCGGACATTGCTCTTAATTGGAAGGCGTTCTTCTAGCCTTTGTATGTTTCTCACATAGGCAATAATATAAGTATCCTCTTTCTAAAAGTTACCTCCCAAACAAGCTTTAACTCATAAGCTCTTCTAATTTCTGTCAATTCATGAGCATAACTCAATTGACATAAAACTTGTACCAATGGCCAAGAGGTCTGTGGTTTGAATCCCCTACCCCACATGTGGTCAAAAAGAAAAAAAAAAAAAAAATCTTCTAATTTCCAAGACCTGAAAGGTATTTTATATTTCTTTTTTCTGTACTTTTATAAATTATATACACCTGTAATCTCTCTCTCTCTGAACTTAATTTTATTGTCAATATTTTCCCTGTTTCATTTGTAATACTATATATTCCTTGAAGTATTATGTATGTATTTAAATATAATATAACTTTTTTTTTCATCTTCTGAAGTATGCAGGGGCTACTTGAGAGGCATAGTAGTGTCCATTCAGAGAACCTTCCCAATTTGAATGAACCATCAGTTGAGTTGCAGGTAAATTCTATTCACTTCAAACCTAGATATATTTTAAAAAATAGAGTGATTATTTTCTCAAATCATCTTACAAATAAGATTGTTGCAGCAGCTTTGAAATCAGAACTTTAGTAGTCAAATGTATCTCTAATTTTGTTTTAATAGGTTGTAGGTTCGAATCTTCCCATTCACATGTGGTGTAATATTTTCAAAACTATTTCTTTGACGGCGATTCTTATTACTATGATTATATTTTTTTACAGCTTGAGAGTAATATTCGAGCCAAGTTGAATGAAGAAGTTGATAAAAAGACCCATGAACTGAGGTGAGTGCAAACCCTAAATCGTTTTTCATGCTCGGATAAAAGAAACAAAAGAAAGAAAGAACATTGTTATTCATAAATTGTGTGAATGTAACAGGCAAATGAAGGGAGAAGAGCTTCAAGGATTGGGGCTGGAGGAACTTAAGAAATTAGAGAAGTCGCTTCAAGGAGGACTCAGCCGTGTTACAGAAATAATGGTTAATTCACAAACTCTTGGCTGCAACATCCATTTAAGTTGGTAAATAAATTTGATTGGAACTCTTCATATATGTTTCAGGATGGAAGAAATATTGAATTGATCAGTGATATTGAGAGGAAGGTAACCATTAAATTATACCCTGATTAG

mRNA sequence

ATGATCACATCGTTCACGATAACGCCCGCACTATCCATATTTTATGGGAGGATATTTTGTCTCTTGGCTGCTTTTTGGTCTTCAGTTTCTAGCGACTTTTCCAATTATAATGCCTCGGACATTGCTCTTAATTGGAAGGCTATGCAGGGGCTACTTGAGAGGCATAGTAGTGTCCATTCAGAGAACCTTCCCAATTTGAATGAACCATCAGTTGAGTTGCAGCTTGAGAGTAATATTCGAGCCAAGTTGAATGAAGAAGTTGATAAAAAGACCCATGAACTGAGGCAAATGAAGGGAGAAGAGCTTCAAGGATTGGGGCTGGAGGAACTTAAGAAATTAGAGAAGTCGCTTCAAGGAGGACTCAGCCGTGTTACAGAAATAATGGATGGAAGAAATATTGAATTGATCAGTGATATTGAGAGGAAGGTAACCATTAAATTATACCCTGATTAG

Coding sequence (CDS)

ATGATCACATCGTTCACGATAACGCCCGCACTATCCATATTTTATGGGAGGATATTTTGTCTCTTGGCTGCTTTTTGGTCTTCAGTTTCTAGCGACTTTTCCAATTATAATGCCTCGGACATTGCTCTTAATTGGAAGGCTATGCAGGGGCTACTTGAGAGGCATAGTAGTGTCCATTCAGAGAACCTTCCCAATTTGAATGAACCATCAGTTGAGTTGCAGCTTGAGAGTAATATTCGAGCCAAGTTGAATGAAGAAGTTGATAAAAAGACCCATGAACTGAGGCAAATGAAGGGAGAAGAGCTTCAAGGATTGGGGCTGGAGGAACTTAAGAAATTAGAGAAGTCGCTTCAAGGAGGACTCAGCCGTGTTACAGAAATAATGGATGGAAGAAATATTGAATTGATCAGTGATATTGAGAGGAAGGTAACCATTAAATTATACCCTGATTAG

Protein sequence

MITSFTITPALSIFYGRIFCLLAAFWSSVSSDFSNYNASDIALNWKAMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTIKLYPD

Homology

[Close]

BLAST of Spg004005 vs. NCBI nr
Match: XP_022141962.1 (MADS-box protein JOINTLESS-like isoform X2 [Momordica charantia])

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-38
Identity = 87/97 (89.69%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 47  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLG 106
           +MQGLLERH+SVHSENLPNLNEPSVELQLESN+RAKLNEEV+KKTHELRQMKGEELQGLG
Sbjct: 61  SMQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLG 120

Query: 107 LEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKV 144
           +EELKKLEKSLQGGL+RV+E+MDGRNI+LI DIERKV
Sbjct: 121 MEELKKLEKSLQGGLNRVSEMMDGRNIDLIHDIERKV 157

[Close]

BLAST of Spg004005 vs. NCBI nr
Match: XP_022141961.1 (MADS-box protein JOINTLESS-like isoform X1 [Momordica charantia])

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-38
Identity = 87/97 (89.69%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 47  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLG 106
           +MQGLLERH+SVHSENLPNLNEPSVELQLESN+RAKLNEEV+KKTHELRQMKGEELQGLG
Sbjct: 61  SMQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLG 120

Query: 107 LEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKV 144
           +EELKKLEKSLQGGL+RV+E+MDGRNI+LI DIERKV
Sbjct: 121 MEELKKLEKSLQGGLNRVSEMMDGRNIDLIHDIERKV 157

[Close]

BLAST of Spg004005 vs. NCBI nr
Match: XP_031744925.1 (MADS-box protein SVP isoform X2 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 3.6e-36
Identity = 83/99 (83.84%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 47  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLG 106
           ++Q +LERH+SVHSENLPNLNEPSVELQLESNIRAKLNEEV+KK+HELRQMKGEELQGLG
Sbjct: 61  SIQEILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLG 120

Query: 107 LEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI 146
           +EELKKLEKSLQGGLSRV EIMDG+N +L+SDI RKV +
Sbjct: 121 MEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKVDL 159

[Close]

BLAST of Spg004005 vs. NCBI nr
Match: XP_004136891.2 (MADS-box protein SVP isoform X1 [Cucumis sativus] >XP_011658821.1 MADS-box protein SVP isoform X1 [Cucumis sativus] >KAE8645819.1 hypothetical protein Csa_017269 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 3.6e-36
Identity = 83/99 (83.84%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 47  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLG 106
           ++Q +LERH+SVHSENLPNLNEPSVELQLESNIRAKLNEEV+KK+HELRQMKGEELQGLG
Sbjct: 61  SIQEILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLG 120

Query: 107 LEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI 146
           +EELKKLEKSLQGGLSRV EIMDG+N +L+SDI RKV +
Sbjct: 121 MEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKVDL 159

[Close]

BLAST of Spg004005 vs. NCBI nr
Match: XP_022971944.1 (MADS-box protein JOINTLESS-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 161.8 bits (408), Expect = 4.7e-36
Identity = 85/99 (85.86%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 47  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLG 106
           ++QGLLE+HSSVHSENLPNLNEPSVE QLESNIRAKLNEEV+KK HELRQMKGEELQGLG
Sbjct: 61  SVQGLLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNEEVEKKRHELRQMKGEELQGLG 120

Query: 107 LEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI 146
           LEELKKLEKSL GGLSRV E+MDGRN ELI DI RKV +
Sbjct: 121 LEELKKLEKSLLGGLSRVAEMMDGRNAELICDIGRKVDL 159

[Close]

BLAST of Spg004005 vs. ExPASy Swiss-Prot
Match: Q9FVC1 (MADS-box protein SVP OS=Arabidopsis thaliana OX=3702 GN=SVP PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-15
Identity = 46/97 (47.42%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 47  AMQGLLERHSSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVDKKTHELRQMKGEELQGL 106
           +M+ +LERH ++ S+NL  L++PS+ELQL E++  A++++E+  K+H LRQM+GEELQGL
Sbjct: 61  SMKEVLERH-NLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGL 120

Query: 107 GLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK 143
            +EEL++LEK+L+ GL+RV E    + +  IS++++K
Sbjct: 121 DIEELQQLEKALETGLTRVIETKSDKIMSEISELQKK 156

[Close]

BLAST of Spg004005 vs. ExPASy Swiss-Prot
Match: Q9FUY6 (MADS-box protein JOINTLESS OS=Solanum lycopersicum OX=4081 GN=J PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.7e-15
Identity = 46/97 (47.42%), Postives = 75/97 (77.32%), Query Frame = 0


Query: 47  AMQGLLERHSSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVDKKTHELRQMKGEELQGL 106
           +M+ +LER   +HS+NL  L++PS+ELQL E++  ++L++E+ +K+H LRQM+GEELQGL
Sbjct: 61  SMKQILERR-DLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGL 120

Query: 107 GLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK 143
            +EEL++LE+SL+ GLSRV E    + +  I+ +++K
Sbjct: 121 NIEELQQLERSLETGLSRVIERKGDKIMREINQLQQK 156

[Close]

BLAST of Spg004005 vs. ExPASy Swiss-Prot
Match: Q9XJ66 (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS22 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12
Identity = 40/96 (41.67%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 47  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLG 106
           +M  +++++++ HS NL    +PS++L LE +  A LNE++ + +  LRQM+GEEL+GL 
Sbjct: 61  SMNEIIDKYNT-HSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLS 120

Query: 107 LEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK 143
           ++EL++LEK+L+ GL RV    D + +E IS+++RK
Sbjct: 121 IDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRK 155

[Close]

BLAST of Spg004005 vs. ExPASy Swiss-Prot
Match: O82794 (MADS-box protein AGL24 OS=Arabidopsis thaliana OX=3702 GN=AGL24 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.0e-10
Identity = 38/80 (47.50%), Postives = 61/80 (76.25%), Query Frame = 0


Query: 48  MQGLLERHSSVHSENLPNL-NEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLG 107
           M+ +L R+ S+H+ N+  L + PS  L+LE+   ++L++EV+ KT +LR+++GE+L GL 
Sbjct: 62  MRDILGRY-SLHASNINKLMDPPSTHLRLENCNLSRLSKEVEDKTKQLRKLRGEDLDGLN 121

Query: 108 LEELKKLEKSLQGGLSRVTE 127
           LEEL++LEK L+ GLSRV+E
Sbjct: 122 LEELQRLEKLLESGLSRVSE 140

[Close]

BLAST of Spg004005 vs. ExPASy Swiss-Prot
Match: Q69TG5 (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS55 PE=2 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 3.3e-08
Identity = 32/70 (45.71%), Postives = 53/70 (75.71%), Query Frame = 0


Query: 73  LQLESNIRAKLNEEVDKKTHELRQMKGEELQGLGLEELKKLEKSLQGGLSRVTEIMDGRN 132
           LQLE +  + LNE++ + + +LRQM+GEEL+GL +EEL+++EK+L+ GL RV    D + 
Sbjct: 109 LQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQF 168

Query: 133 IELISDIERK 143
           ++ IS+++RK
Sbjct: 169 MQEISELQRK 178

[Close]

BLAST of Spg004005 vs. ExPASy TrEMBL
Match: A0A6J1CLA0 (MADS-box protein JOINTLESS-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012209 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 6.4e-39
Identity = 87/97 (89.69%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 47  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLG 106
           +MQGLLERH+SVHSENLPNLNEPSVELQLESN+RAKLNEEV+KKTHELRQMKGEELQGLG
Sbjct: 61  SMQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLG 120

Query: 107 LEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKV 144
           +EELKKLEKSLQGGL+RV+E+MDGRNI+LI DIERKV
Sbjct: 121 MEELKKLEKSLQGGLNRVSEMMDGRNIDLIHDIERKV 157

[Close]

BLAST of Spg004005 vs. ExPASy TrEMBL
Match: A0A6J1CKS2 (MADS-box protein JOINTLESS-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012209 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 6.4e-39
Identity = 87/97 (89.69%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 47  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLG 106
           +MQGLLERH+SVHSENLPNLNEPSVELQLESN+RAKLNEEV+KKTHELRQMKGEELQGLG
Sbjct: 61  SMQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLG 120

Query: 107 LEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKV 144
           +EELKKLEKSLQGGL+RV+E+MDGRNI+LI DIERKV
Sbjct: 121 MEELKKLEKSLQGGLNRVSEMMDGRNIDLIHDIERKV 157

[Close]

BLAST of Spg004005 vs. ExPASy TrEMBL
Match: A0A6J1IA12 (MADS-box protein JOINTLESS-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470617 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.3e-36
Identity = 85/99 (85.86%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 47  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLG 106
           ++QGLLE+HSSVHSENLPNLNEPSVE QLESNIRAKLNEEV+KK HELRQMKGEELQGLG
Sbjct: 61  SVQGLLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNEEVEKKRHELRQMKGEELQGLG 120

Query: 107 LEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI 146
           LEELKKLEKSL GGLSRV E+MDGRN ELI DI RKV +
Sbjct: 121 LEELKKLEKSLLGGLSRVAEMMDGRNAELICDIGRKVDL 159

[Close]

BLAST of Spg004005 vs. ExPASy TrEMBL
Match: A0A6J1I4L2 (MADS-box protein JOINTLESS-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111470617 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.3e-36
Identity = 85/99 (85.86%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 47  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLG 106
           ++QGLLE+HSSVHSENLPNLNEPSVE QLESNIRAKLNEEV+KK HELRQMKGEELQGLG
Sbjct: 61  SVQGLLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNEEVEKKRHELRQMKGEELQGLG 120

Query: 107 LEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI 146
           LEELKKLEKSL GGLSRV E+MDGRN ELI DI RKV +
Sbjct: 121 LEELKKLEKSLLGGLSRVAEMMDGRNAELICDIGRKVDL 159

[Close]

BLAST of Spg004005 vs. ExPASy TrEMBL
Match: A0A6J1I8F3 (MADS-box protein JOINTLESS-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470617 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.3e-36
Identity = 85/99 (85.86%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 47  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLG 106
           ++QGLLE+HSSVHSENLPNLNEPSVE QLESNIRAKLNEEV+KK HELRQMKGEELQGLG
Sbjct: 61  SVQGLLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNEEVEKKRHELRQMKGEELQGLG 120

Query: 107 LEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERKVTI 146
           LEELKKLEKSL GGLSRV E+MDGRN ELI DI RKV +
Sbjct: 121 LEELKKLEKSLLGGLSRVAEMMDGRNAELICDIGRKVDL 159

[Close]

BLAST of Spg004005 vs. TAIR 10
Match: AT2G22540.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-16
Identity = 46/97 (47.42%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 47  AMQGLLERHSSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVDKKTHELRQMKGEELQGL 106
           +M+ +LERH ++ S+NL  L++PS+ELQL E++  A++++E+  K+H LRQM+GEELQGL
Sbjct: 61  SMKEVLERH-NLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGL 120

Query: 107 GLEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK 143
            +EEL++LEK+L+ GL+RV E    + +  IS++++K
Sbjct: 121 DIEELQQLEKALETGLTRVIETKSDKIMSEISELQKK 156

[Close]

BLAST of Spg004005 vs. TAIR 10
Match: AT2G22540.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-16
Identity = 46/96 (47.92%), Postives = 75/96 (78.12%), Query Frame = 0


Query: 48  MQGLLERHSSVHSENLPNLNEPSVELQL-ESNIRAKLNEEVDKKTHELRQMKGEELQGLG 107
           M+ +LERH ++ S+NL  L++PS+ELQL E++  A++++E+  K+H LRQM+GEELQGL 
Sbjct: 57  MKEVLERH-NLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLD 116

Query: 108 LEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK 143
           +EEL++LEK+L+ GL+RV E    + +  IS++++K
Sbjct: 117 IEELQQLEKALETGLTRVIETKSDKIMSEISELQKK 151

[Close]

BLAST of Spg004005 vs. TAIR 10
Match: AT4G24540.1 (AGAMOUS-like 24 )

HSP 1 Score: 65.5 bits (158), Expect = 4.3e-11
Identity = 38/80 (47.50%), Postives = 61/80 (76.25%), Query Frame = 0


Query: 48  MQGLLERHSSVHSENLPNL-NEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLG 107
           M+ +L R+ S+H+ N+  L + PS  L+LE+   ++L++EV+ KT +LR+++GE+L GL 
Sbjct: 62  MRDILGRY-SLHASNINKLMDPPSTHLRLENCNLSRLSKEVEDKTKQLRKLRGEDLDGLN 121

Query: 108 LEELKKLEKSLQGGLSRVTE 127
           LEEL++LEK L+ GLSRV+E
Sbjct: 122 LEELQRLEKLLESGLSRVSE 140

[Close]

BLAST of Spg004005 vs. TAIR 10
Match: AT3G57230.1 (AGAMOUS-like 16 )

HSP 1 Score: 42.4 bits (98), Expect = 3.9e-04
Identity = 32/96 (33.33%), Postives = 48/96 (50.00%), Query Frame = 0


Query: 47  AMQGLLERHSSVHSENLPNLNEPSVELQLESNIRAKLNEEVDKKTHELRQMKGEELQGLG 106
           +M+ ++ER+S    E   + N+P+ E+Q      A L  ++       RQM GEEL GL 
Sbjct: 61  SMKSVIERYSDAKGET-SSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLS 120

Query: 107 LEELKKLEKSLQGGLSRVTEIMDGRNIELISDIERK 143
           +E L+ LE  L+  L  V    D   IE I  + R+
Sbjct: 121 VEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNRE 155

The following BLAST results are available for this feature:

BLAST of Spg004005 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141962.1	1.3e-38	89.69	MADS-box protein JOINTLESS-like isoform X2 [Momordica charantia]	[more]
XP_022141961.1	1.3e-38	89.69	MADS-box protein JOINTLESS-like isoform X1 [Momordica charantia]	[more]
XP_031744925.1	3.6e-36	83.84	MADS-box protein SVP isoform X2 [Cucumis sativus]	[more]
XP_004136891.2	3.6e-36	83.84	MADS-box protein SVP isoform X1 [Cucumis sativus] >XP_011658821.1 MADS-box prote...	[more]
XP_022971944.1	4.7e-36	85.86	MADS-box protein JOINTLESS-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Spg004005 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVC1	1.6e-15	47.42	MADS-box protein SVP OS=Arabidopsis thaliana OX=3702 GN=SVP PE=1 SV=1	[more]
Q9FUY6	4.7e-15	47.42	MADS-box protein JOINTLESS OS=Solanum lycopersicum OX=4081 GN=J PE=1 SV=1	[more]
Q9XJ66	1.7e-12	41.67	MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
O82794	6.0e-10	47.50	MADS-box protein AGL24 OS=Arabidopsis thaliana OX=3702 GN=AGL24 PE=1 SV=1	[more]
Q69TG5	3.3e-08	45.71	MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]

BLAST of Spg004005 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLA0	6.4e-39	89.69	MADS-box protein JOINTLESS-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1CKS2	6.4e-39	89.69	MADS-box protein JOINTLESS-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1IA12	2.3e-36	85.86	MADS-box protein JOINTLESS-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1I4L2	2.3e-36	85.86	MADS-box protein JOINTLESS-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1I8F3	2.3e-36	85.86	MADS-box protein JOINTLESS-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Spg004005 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22540.1	1.2e-16	47.42	K-box region and MADS-box transcription factor family protein	[more]
AT2G22540.2	1.5e-16	47.92	K-box region and MADS-box transcription factor family protein	[more]
AT4G24540.1	4.3e-11	47.50	AGAMOUS-like 24	[more]
AT3G57230.1	3.9e-04	33.33	AGAMOUS-like 16	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 80..100
None	No IPR available	PANTHER	PTHR48019:SF57	SUBFAMILY NOT NAMED	coord: 47..138
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 47..138
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 81..142 e-value: 1.9E-7 score: 31.2
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 73..150 score: 8.772484

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg004005.1	Spg004005.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding