Spg003951 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg003951
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiondynamin-related protein 3A-like
Locationscaffold4: 1399028 .. 1400644 (-)
RNA-Seq ExpressionSpg003951
SyntenySpg003951
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCAACCTCTAGCCCATGGGCGGGGGCGCAATGTCGGCACACCCGTGCCGCCCGACACTGTCCTTGGAAACCCATTCCCAAAGGAAGACGCCCAAGACACTCGTCTTACAACGCTCGCCCACGCCATGACACACGCATGTGCCATGGGGTAGCTCACTTAGGCCACAGGGCCCAGGGGTGGTGGAGAGCTAACACCATGCCTCCCCTTATAGTGCATTCTGAGGCATATTTGGTCTGACACCCTTGCACGTCATATTCACGAGGAGTCATACGCCAACGTGGAGCGCCCGTCTGGTGTCCGATTGACATGAAACTTTGCGGGCTTGCATACTTCACTCATATGCACTTAACTCCAGAGCCGCTCGTCAAAACTCACGACTGAACCCCGACTTCCGAGGTCATGGCCCGGGGCCCCATCTGACCCCATTAAGCATACCACTAACGCGTCTGACGACACTGTTGCTTCTCAATATGCTCATGCCTTCTTGTGGCATTTATGCCCACTCATTCTGGTGTGTTGGATGATGCATCGTCCTCCTCGATCGCATCATGGCACTTTTCTCTCTCGGCCCTCTGACATGGCCCGATGGGCGACACTCGACGTGTCACCACTTCACTGTCTGCTCAGTGAGGGTCACAACCTACTCTCTTCTAGTATGGTTGTGACACTTTGCATGAAGAGTTGATTTTGGTTGTAGAGTCTTTTAATGGTGATCTCTTGCATGCCGCTTCAATATTATAGCCTCTTCAAGTTTGATGGTTCTGTTGAAGATTTATCTTTGGCAGTCAAATGGTTGCTTGATTTTGGATGTCTAATGGTTGCTTGATGTTGTTGGTTTTGGTCAGCTTGCTGCGTTTTTTGTCTTTGGAAGCTTCTCAATTGGGTTTCTAGTTTCATGAATGCTCTCTGGCTTTGTTTCTTCTTTTTGGGTTTTTATTTGGCTCCTTTGTCTATCTTTTTTGGTTGTTTTGCTGTTGTAGTTTTTCTTTCAGCATTTGATTGGGTTGCTATTTACTTTATTATTTTGTTTTATCTTCTTTTTCTCCCTTGTGGTGTTTGTATGAGCATGAGTCTCTTTTCATTTCTTCGATGAAAATTTTGGTTTCTTGTTCAATTATACTTGTATTTGCAGATGGGGTACATAAACACTTCACACCCAAATTTTCTTGGTGGGAGCAAGGCCGTTGAGATTGCATTGCAACAAGTCAAATCCTCTAGGGTTTCCCTGCCTATCTCTAGACAGAAGGTAAAGGCAACAACAACTGCTTACCTTTTTTTTTTCGATAAAGAAACACTACATTTAAGAAAAATTTTACTTTCAAGGAACCTTACGTTTCTAATATTTTTGGAAAAAATTATTTTCATGTGTTTTCCACCCTCCCCTCTCTTGTGTTGAGCTCCATTAGGAAGTAATTTTATGTAAATGCTCTTTCCCTTCTCCCTCTCTCCTGAGCGTGACTAGCCTTGGCCTTTGGTGCCCTTTGCATTAATCTTTTGGGTAAAGGTGATGGCGTTTAAGGCACAAAAATGGGGAATAGAAGAGAAATGGTTTGTTGTTGACTTTGGTCGGAAGAAGAAAGCTAGATATGTTTCGTTTTCAGAAAATGACTAG

mRNA sequence

ATGGTGCAACCTCTAGCCCATGGGCGGGGGCGCAATGTCGGCACACCCGTGCCGCCCGACACTGTCCTTGGAAACCCATTCCCAAAGGAAGACGCCCAAGACACTCGTCTTACAACGCTCGCCCACGCCATGACACACGCATGTGCCATGGGCCGCTCGTCAAAACTCACGACTGAACCCCGACTTCCGAGGTCATGGCCCGGGGCCCCATCTGACCCCATTAAGCATACCACTAACGCGTCTGACGACACTGTTGCTTCTCAATATGCTCATGCCTTCTTGTGGCATTTATGCCCACTCATTCTGAGTCTTTTAATGGTGATCTCTTGCATGCCGCTTCAATATTATAGCCTCTTCAAGTTTGATGGTTCTGTTGAAGATTTATCTTTGGCAGTCAAATGGTTGCTTGATTTTGGATGTCTAATGATGGGGTACATAAACACTTCACACCCAAATTTTCTTGGTGGGAGCAAGGCCGTTGAGATTGCATTGCAACAAGTCAAATCCTCTAGGGTTTCCCTGCCTATCTCTAGACAGAAGGTGATGGCGTTTAAGGCACAAAAATGGGGAATAGAAGAGAAATGGTTTGTTGTTGACTTTGGTCGGAAGAAGAAAGCTAGATATGTTTCGTTTTCAGAAAATGACTAG

Coding sequence (CDS)

ATGGTGCAACCTCTAGCCCATGGGCGGGGGCGCAATGTCGGCACACCCGTGCCGCCCGACACTGTCCTTGGAAACCCATTCCCAAAGGAAGACGCCCAAGACACTCGTCTTACAACGCTCGCCCACGCCATGACACACGCATGTGCCATGGGCCGCTCGTCAAAACTCACGACTGAACCCCGACTTCCGAGGTCATGGCCCGGGGCCCCATCTGACCCCATTAAGCATACCACTAACGCGTCTGACGACACTGTTGCTTCTCAATATGCTCATGCCTTCTTGTGGCATTTATGCCCACTCATTCTGAGTCTTTTAATGGTGATCTCTTGCATGCCGCTTCAATATTATAGCCTCTTCAAGTTTGATGGTTCTGTTGAAGATTTATCTTTGGCAGTCAAATGGTTGCTTGATTTTGGATGTCTAATGATGGGGTACATAAACACTTCACACCCAAATTTTCTTGGTGGGAGCAAGGCCGTTGAGATTGCATTGCAACAAGTCAAATCCTCTAGGGTTTCCCTGCCTATCTCTAGACAGAAGGTGATGGCGTTTAAGGCACAAAAATGGGGAATAGAAGAGAAATGGTTTGTTGTTGACTTTGGTCGGAAGAAGAAAGCTAGATATGTTTCGTTTTCAGAAAATGACTAG

Protein sequence

MVQPLAHGRGRNVGTPVPPDTVLGNPFPKEDAQDTRLTTLAHAMTHACAMGRSSKLTTEPRLPRSWPGAPSDPIKHTTNASDDTVASQYAHAFLWHLCPLILSLLMVISCMPLQYYSLFKFDGSVEDLSLAVKWLLDFGCLMMGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQKVMAFKAQKWGIEEKWFVVDFGRKKKARYVSFSEND
Homology
[Close]
BLAST of Spg003951 vs. NCBI nr
Match: XP_038888013.1 (dynamin-related protein 3A-like isoform X1 [Benincasa hispida])

HSP 1 Score: 75.9 bits (185), Expect = 4.8e-10
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 143 MGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQKV 182
           M YINTSHPNF+GGSKAVEIALQQVKSSRVSLPISRQKV
Sbjct: 501 MNYINTSHPNFIGGSKAVEIALQQVKSSRVSLPISRQKV 539

[Close]
BLAST of Spg003951 vs. NCBI nr
Match: XP_038888015.1 (dynamin-related protein 3A-like isoform X3 [Benincasa hispida])

HSP 1 Score: 75.9 bits (185), Expect = 4.8e-10
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 143 MGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQKV 182
           M YINTSHPNF+GGSKAVEIALQQVKSSRVSLPISRQKV
Sbjct: 501 MNYINTSHPNFIGGSKAVEIALQQVKSSRVSLPISRQKV 539

[Close]
BLAST of Spg003951 vs. NCBI nr
Match: XP_038888016.1 (dynamin-related protein 3A-like isoform X4 [Benincasa hispida])

HSP 1 Score: 75.9 bits (185), Expect = 4.8e-10
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0 

Query: 143 MGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQKV 182
           M YINTSHPNF+GGSKAVEIALQQVKSSRVSLPISRQKV
Sbjct: 459 MNYINTSHPNFIGGSKAVEIALQQVKSSRVSLPISRQKV 497

[Close]
BLAST of Spg003951 vs. NCBI nr
Match: XP_022927872.1 (dynamin-related protein 3A-like [Cucurbita moschata])

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-09
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 143 MGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 181
           M YINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK
Sbjct: 501 MDYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 538

[Close]
BLAST of Spg003951 vs. NCBI nr
Match: KAG7022524.1 (Dynamin-related protein 3A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-09
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 143 MGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 181
           M YINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK
Sbjct: 514 MDYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 551

[Close]
BLAST of Spg003951 vs. ExPASy Swiss-Prot
Match: Q8S944 (Dynamin-related protein 3A OS=Arabidopsis thaliana OX=3702 GN=DRP3A PE=1 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 6.1e-08
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 143 MGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 181
           M YINTSHPNF+GG+KAVE A+ QVKSSR+  P++R K
Sbjct: 519 MDYINTSHPNFIGGTKAVEAAMHQVKSSRIPHPVARPK 556

[Close]
BLAST of Spg003951 vs. ExPASy Swiss-Prot
Match: Q8LFT2 (Dynamin-related protein 3B OS=Arabidopsis thaliana OX=3702 GN=DRP3B PE=1 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 3.1e-07
Identity = 25/38 (65.79%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 143 MGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 181
           M YINTSHPNF+GG+KAVE A+Q VKSSR+  P++R +
Sbjct: 504 MDYINTSHPNFIGGTKAVEQAMQTVKSSRIPHPVARPR 541

[Close]
BLAST of Spg003951 vs. ExPASy TrEMBL
Match: A0A6J1JN11 (dynamin-related protein 3A-like OS=Cucurbita maxima OX=3661 GN=LOC111485945 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.2e-10
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 143 MGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 181
           M YINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK
Sbjct: 501 MDYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 538

[Close]
BLAST of Spg003951 vs. ExPASy TrEMBL
Match: A0A6J1C4L9 (dynamin-related protein 3A-like OS=Momordica charantia OX=3673 GN=LOC111008327 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.2e-10
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 143 MGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 181
           M YINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK
Sbjct: 445 MDYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 482

[Close]
BLAST of Spg003951 vs. ExPASy TrEMBL
Match: A0A6J1EIE6 (dynamin-related protein 3A-like OS=Cucurbita moschata OX=3662 GN=LOC111434639 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.2e-10
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 143 MGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 181
           M YINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK
Sbjct: 501 MDYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 538

[Close]
BLAST of Spg003951 vs. ExPASy TrEMBL
Match: A0A5A7SPG0 (Dynamin-related protein 3A-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001870 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 6.8e-10
Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 143 MGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 181
           M YINTSHPNF+GGSKAVEIALQQVKSSRVSLPISRQK
Sbjct: 501 MNYINTSHPNFIGGSKAVEIALQQVKSSRVSLPISRQK 538

[Close]
BLAST of Spg003951 vs. ExPASy TrEMBL
Match: A0A6J1I716 (dynamin-related protein 3A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470584 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 6.8e-10
Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 143 MGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 181
           M YINTSHPNF+GGSKAVEIALQQVKSSRVSLPISRQK
Sbjct: 501 MNYINTSHPNFIGGSKAVEIALQQVKSSRVSLPISRQK 538

[Close]
BLAST of Spg003951 vs. TAIR 10
Match: AT4G33650.1 (dynamin-related protein 3A )

HSP 1 Score: 59.3 bits (142), Expect = 4.4e-09
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 143 MGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 181
           M YINTSHPNF+GG+KAVE A+ QVKSSR+  P++R K
Sbjct: 519 MDYINTSHPNFIGGTKAVEAAMHQVKSSRIPHPVARPK 556

[Close]
BLAST of Spg003951 vs. TAIR 10
Match: AT4G33650.2 (dynamin-related protein 3A )

HSP 1 Score: 59.3 bits (142), Expect = 4.4e-09
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 143 MGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 181
           M YINTSHPNF+GG+KAVE A+ QVKSSR+  P++R K
Sbjct: 519 MDYINTSHPNFIGGTKAVEAAMHQVKSSRIPHPVARPK 556

[Close]
BLAST of Spg003951 vs. TAIR 10
Match: AT2G14120.1 (dynamin related protein )

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-08
Identity = 25/38 (65.79%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 143 MGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 181
           M YINTSHPNF+GG+KAVE A+Q VKSSR+  P++R +
Sbjct: 504 MDYINTSHPNFIGGTKAVEQAMQTVKSSRIPHPVARPR 541

[Close]
BLAST of Spg003951 vs. TAIR 10
Match: AT2G14120.2 (dynamin related protein )

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-08
Identity = 25/38 (65.79%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 143 MGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 181
           M YINTSHPNF+GG+KAVE A+Q VKSSR+  P++R +
Sbjct: 504 MDYINTSHPNFIGGTKAVEQAMQTVKSSRIPHPVARPR 541

[Close]
BLAST of Spg003951 vs. TAIR 10
Match: AT2G14120.3 (dynamin related protein )

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-08
Identity = 25/38 (65.79%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 143 MGYINTSHPNFLGGSKAVEIALQQVKSSRVSLPISRQK 181
           M YINTSHPNF+GG+KAVE A+Q VKSSR+  P++R +
Sbjct: 533 MDYINTSHPNFIGGTKAVEQAMQTVKSSRIPHPVARPR 570

The following BLAST results are available for this feature:
BLAST of Spg003951 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038888013.14.8e-1094.87dynamin-related protein 3A-like isoform X1 [Benincasa hispida][more]
XP_038888015.14.8e-1094.87dynamin-related protein 3A-like isoform X3 [Benincasa hispida][more]
XP_038888016.14.8e-1094.87dynamin-related protein 3A-like isoform X4 [Benincasa hispida][more]
XP_022927872.11.1e-0997.37dynamin-related protein 3A-like [Cucurbita moschata][more]
KAG7022524.11.1e-0997.37Dynamin-related protein 3A [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Spg003951 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8S9446.1e-0868.42Dynamin-related protein 3A OS=Arabidopsis thaliana OX=3702 GN=DRP3A PE=1 SV=2[more]
Q8LFT23.1e-0765.79Dynamin-related protein 3B OS=Arabidopsis thaliana OX=3702 GN=DRP3B PE=1 SV=2[more]
BLAST of Spg003951 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JN115.2e-1097.37dynamin-related protein 3A-like OS=Cucurbita maxima OX=3661 GN=LOC111485945 PE=3... [more]
A0A6J1C4L95.2e-1097.37dynamin-related protein 3A-like OS=Momordica charantia OX=3673 GN=LOC111008327 P... [more]
A0A6J1EIE65.2e-1097.37dynamin-related protein 3A-like OS=Cucurbita moschata OX=3662 GN=LOC111434639 PE... [more]
A0A5A7SPG06.8e-1094.74Dynamin-related protein 3A-like isoform X1 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A6J1I7166.8e-1094.74dynamin-related protein 3A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
BLAST of Spg003951 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G33650.14.4e-0968.42dynamin-related protein 3A [more]
AT4G33650.24.4e-0968.42dynamin-related protein 3A [more]
AT2G14120.12.2e-0865.79dynamin related protein [more]
AT2G14120.22.2e-0865.79dynamin related protein [more]
AT2G14120.32.2e-0865.79dynamin related protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg003951.1Spg003951.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000266 mitochondrial fission
biological_process GO:0016559 peroxisome fission
cellular_component GO:0016020 membrane
cellular_component GO:0005874 microtubule
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005777 peroxisome
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0008017 microtubule binding