Spg003909 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003909
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold4: 1047278 .. 1052287 (+)
RNA-Seq Expression	Spg003909
Synteny	Spg003909

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTAAACGGCTAAAAAAAACATTTTTGAAATAACCTAATCTTGATAACTTAACAGAAAAAAAAGTACCAGTTTTTTTTTCCGACCGAGTGCTGTGTTAAGTGACAACACGTCCAGAAAGTCGTCGGCGATTAAAGAAACAAGCAAAACGGAAATCAGATCACCGACTGAACGATCCATTTCCATGGCTTCTCGCACTCTCTTCCTCACCTTAAGCCGGTAAGTATCGCTGTTTCTATATTCTATGCAATTTCATTTCTTCTCCATTTCTCCTTTTGGCTGCTGGGAAGATCGACGAGTGTTTGATCCCAAATTTCCGCTTTGAATTGAACTGAATCTTGTGTTCCATGAGGAACGGCTTACTGCATTCCTTTTAATCTCTAGCGTTTCCCGGCAGTCAAATCGGGTAGGGGTTGGGGACGTTCTATACCTCTTTCATTATTTGATGATTTGTGTGAATCGATCTGAACCCTAGAAAATTCAGGAACAGAGGCTTCTTAAATCGAAGTTTCAAAGCGACCCCGGTCTTCAATGAGGCTAGTGTTTCGAATTATTGCTCTCATGGAGCTCTGAGGAGTGAATCTTTTGAAGAATCAGTGAATTCTGAAGAATCCAATGACTTGAAGAGCAGAATATTCCGGCTCAGATTGCCCAAGCGGAGCGCTACCAACGTTCTTCAGAGATGGATGAGTGAGGGCAATCAAGTTTCGATCACTGAGCTCCGGCATATCTCCAAGGAGCTCAGAAGGGTTCAGCGGTATAAGCACGCGCTCGAGGTACTATTTTATTTGTTTTCTTCATCTTCTTGCTAAAGTCTTGTGCTTTCAGATGATAAGTGGCAATAACAAAATTGAAGTGAAATTTACTGTGGCTCTTAAGAGTCGTTGGGACAACTCTCAAGAAATCAAATGTGCACTTCTCTGTAATTAAACATGATTATAGGGGAAAGCGAACAAGTACTTCGAAAATTTTCAGCTAAATAAGAAATGGCTAGCTTCTAAAATCTAATTCTAAGGAAATGTGAAATTTAACTCATGTACTCGTGATCTGCATAAATATTGTTGAGGGAGGTTTGTATTTGTAATTCTTAGATATATGGTTAGTCTAGTTAGTTTAGTCTTCTAGAGTGAAGGAAGTATACTCTTCAACCTTATTTTTGGTATTAGAACAAGAAGATTTATATGTCCGCGAACCAGAACGTTTTAGCCTGTTGAATCAAACATGTGGAGAGACTGGTGTTTGATGCAAGCCATATGAAATAAGCATGAAAAGTACCATTTTTAGGAACTAGAAAACCAACGGGTCATTTCATGTAATATTTGCTGAGTTCATTTAGATTAACTTTCTAAAATGCATACCAATGTCTGGTTGTTGTGTCTCTGAAGTAAAAGTAGGACAAAGAGTAAATAAAATACTATTTGCTGAGGGCTAAAATTGCCAAAATAATTGAGCTCAAGAGTTTTTCACAACCCATATGCAACAAGACAGGCCTCAAGTCTACTGTCACTACCATCGTCATTAACCTTTCCTTTTAAAGCAAATACACCTATTATTAACATTGTAATCCCATAGAAAATAGAATACGTCAAAGAAACCATGTATTATTACACAAGAGAACGTTATACCCTGTTCCAGGGTAGACTTCCAAGTAGAATTAGCAATTTGTGGGTTCACTTGGTAATAGTGAAGAGGCATTGGCATCAAAGTAAGAATTAGATATTATTTTTCCTGCTTTGAATTGTTTTATCATGGTATGGTGGGATTAGGGAAGGATAGGTTATGAATAGAAATAGACAATTCAGTAGATAACAAAGGAAGAGAAGCAAACAACAGAGCCATTGATTGGTGAGGAAGTGTCAGAATCAGTAACTGGTAAAGGTGAATGGTTTGTGACATCGCTAGGAGGAGGGCTAAAATTATCATCACTAGTGACTTGGGATGCTTTGGAGCACATATCTAAATCAATTGACCACGATTGAAGTAATACAAAATCTTATGTTTAAAGCCTCCGGGGAAGAAGAGGAAACTTTGTGTTTGAAAGGAAATTCAGGCAGAAACGTATATGACCAGACCACTTTTTGCGGACTTATTAGACACAAATTGAAAGCTCTAGAACTTATTAGACACAAAATCAAAAGTTTAGAGACTTATTTGACACTTTTTAATGGCCAGAGACCTATTAGACACAAAATTGAAAGTTCAAGGAGTTGTTTGACACAAACATCCAAGTTCATGGACTGAACTTGTAATCTAATATTTCTTAAATCATCTGTTGATGTTTCCTTTCAACACACAAGTTTGTTGATGAACATGAAGATAAGGACAGGATGGTGGAAGAAAACACTTAGTTGATTGAGTGCAGCCATGATGCTTCTAAACTTACTTTCTAGGTAATTTGAGTTTTTCATCAAATTGTCCATCAATAAATGCATGAAATTGAAGGCAGAAAGATTTGGTCTCAGATATGTCTTAGAGGGATAATCTGAGTAAATGTATTTATAAAAAAAACTTGAATAGTATCAAAAACTTGATAAAGATAAAATAGGAACCGGTCCCTAATGTCTGCATGAATAACTTTAAATGATTTAGCAGCTATATGACTGATAGGAACTGTATTAGGATAAAATTAGGAATATAAATATTATTAGCGTATTAAGGGTACTTTGGTAATTGGTTATAGAAGTTTATGGTAAATTATTATAAATAGAGAGTGTGGGGAAGGAGAAAGGTAGGCAATTGTTTAGTTGGACTAGAGCTTGAGTGATCTCTAGGGAGGGAGGGTTAGATAAGGTTCAAGTACCTCAAATTACTCGGTTTATCTTGTAGTTCTTGTATTTTTTATGTTGCAATGTATTTGGGGTTCTATCAATGACGAGATGAAGGAAAAGAGATTTATGCAATTTGCTTAATCGACATGCTTGGACAAAGTTTTTAACTCTTTCCCTGGAATGTCCAGAACTGAGAGAAAGGATTCCAGTACAAAAAGGAATGGTCAATACACTGTTGCGATAGATTTGCTGAGCTGGCACTGGTAACATGGGGCAAAATTAGTAGTTGGGACACTATTGCAAGACAAATTACTGGGACCAGAGTTTCTAAATTTAGCAGAGAATAGACACTCCTGTGTTGTTAGCCCTGGATTTTGCAGCAGAAGTTTTAGTCTCAAAGTGATATGGCCCGTCCTTCACCCTGCAATAGTACTACTGTCTCAGTCTTGTCCTTTACTGCAAAACAAATTACTGGCTGCCATAGTTTCTAAATTTAGGAGGGAGTAGACACTATTGTGTTGTTAATCTTGGATTTTGCAGAAGCCATTTTAGTCTCAAAGTGATCTGGCCCATCCTTTGTTCTGCAACAGTACCACTGTCTCAGTCTTTGTCCTTTATGGAACATAAGAGGAGGGAATTCCACAACTGATGTACTCGGTAAATGTTTTGTAATGAGATGAATGCAAGAAGTATATTTATGGGCAAATGAAACAATGGGAAGAAGATTTGAGGGACTGTTGGGCTATACGAGAAATTGATAGTTGTGATCCATTAAAATGTTTTGCTGAAAAGAAAAGGAGGAATTATCCTGTTTGGAGTCTTCCTTAATCCTTGGAGAATAATCCACATATTTTGAGAGTCCAATTAAAAGGTTGAAGAATTGTATTTAAATGTTCCTTCAAAGGATACTCTGCTGCATAAATTATTAAAAATGTAATTGTATGCTAATATTCAGGAAAAATGGGTCAAGTTGCATTGTATTACAAGTGAAAATGAATTTTTCGTTTGCTGAAATATTTCTTATTTCTCATTTCTCATTTGAGAAAAGGATAAGGAACTGGTTAAAGGATCACCGTCGTTTTCTTTGGCTCATAATCTGTAGAACACTGATCAGGGGGCTTGTACGTCATCTTCTTTATTTACAATGAACGGACAATCTGTCTACATTACACTTTTGCACATCATTAACTGTCAACACTGTTTTCTTGCTTGCAGATTTTAGAATGGATGGTGACTCATAATAAATTTGAGTTATCTGATTCTGACTTTGCAGTCCGTATTGACTTGATGACAAAAGTATTTGGCATCGATGCTGCTGAACGTTACTTTGAAGGTCTGCCTATTCATGCCAAAACCTGTAAGACGTATACTGCTCTCCTTCACTCTTTTGCTGGGTCCAAATTGACTGAAAAGGCTGAAATTATTTATGAAAGAATAAAGGAGACAGAAGTACCTCTCACTGCTCTTCCGTTCAACGAGATGATGACTTTGTACATGTCGGTCGGGCTAGTAGAAAAGGTATCTTCGATTGTGGATGACCTGAAACAAAGGAAGGTTCATACTGACATTTTCACTTATAATCTTTGGATCAGCTCCTTGGCTGCAGCTTTAAATATCGATGGCGTTAGACGGGTTCTTGATGAGATGAAATGCGACCCCAATTCGAATGTAGATTGGGTGCGATATATTGATCTTGTGAACATCTATGTTACGTCAGCTCATCTATTGCATTCGGGGTCGAACTCCGTAGTCGAGTCTGAGAGTGGCATTACGCAGCGAGAATGGATTACATATGACCTCCTCGTTATCTTGTATGCTGGTCTTGGAAACAAAGACAAAATCGATCAGATTTGGAGATCATTAAGGATGACGAAGCAAAAGATGACAAGCAGAAACTACATTTGCATTCTTTCTTGTTACCTGATGCTTGATCATTTGAAGGAAATTGGAGAAGTTATTGATCAGTGGAAACAATCAACCACTACAGATTTTGATGTTTCTGCCTGTAACAGGCTTGTAAATGCGTTTGTTGAAGCTGGCTTGAATGAGAAAGCCAATAGTTTTGTTAACCTTTTGATTCAGAAGAACTGTAACCTCACAGAAGCAGAGTTGTAGAAAGTAGGTTTAATTCTTAATTTTGTCTATTTCGTTTTGATTCAACAAGTTTCAAATGTTTTGTTTTAGTTTTCAATTTTCAAACGTTGCCCTTAATTGTCTAAAAATAGTATATTAGTCATTATCAG

mRNA sequence

ATGGTGACTCATAATAAATTTGAGTTATCTGATTCTGACTTTGCAGTCCGTATTGACTTGATGACAAAAGTATTTGGCATCGATGCTGCTGAACGTTACTTTGAAGGTCTGCCTATTCATGCCAAAACCTGTAAGACGTATACTGCTCTCCTTCACTCTTTTGCTGGGTCCAAATTGACTGAAAAGGCTGAAATTATTTATGAAAGAATAAAGGAGACAGAAGTACCTCTCACTGCTCTTCCGTTCAACGAGATGATGACTTTGTACATGTCGGTCGGGCTAGTAGAAAAGGTATCTTCGATTGTGGATGACCTGAAACAAAGGAAGGTTCATACTGACATTTTCACTTATAATCTTTGGATCAGCTCCTTGGCTGCAGCTTTAAATATCGATGGCGTTAGACGGGTTCTTGATGAGATGAAATGCGACCCCAATTCGAATGTAGATTGGGTGCGATATATTGATCTTGTGAACATCTATGTTACGTCAGCTCATCTATTGCATTCGGGGTCGAACTCCGTAGTCGAGTCTGAGAGTGGCATTACGCAGCGAGAATGGATTACATATGACCTCCTCGTTATCTTGTATGCTGGTCTTGGAAACAAAGACAAAATCGATCAGATTTGGAGATCATTAAGGATGACGAAGCAAAAGATGACAAGCAGAAACTACATTTGCATTCTTTCTTGTTACCTGATGCTTGATCATTTGAAGGAAATTGGAGAAGTTATTGATCAGTGGAAACAATCAACCACTACAGATTTTGATGTTTCTGCCTGTAACAGGCTTGTAAATGCGTTTGTTGAAGCTGGCTTGAATGAGAAAGCCAATAGTTTTGTTAACCTTTTGATTCAGAAGAACTGTAACCTCACAGAAGCAGAGTTGTAG

Coding sequence (CDS)

ATGGTGACTCATAATAAATTTGAGTTATCTGATTCTGACTTTGCAGTCCGTATTGACTTGATGACAAAAGTATTTGGCATCGATGCTGCTGAACGTTACTTTGAAGGTCTGCCTATTCATGCCAAAACCTGTAAGACGTATACTGCTCTCCTTCACTCTTTTGCTGGGTCCAAATTGACTGAAAAGGCTGAAATTATTTATGAAAGAATAAAGGAGACAGAAGTACCTCTCACTGCTCTTCCGTTCAACGAGATGATGACTTTGTACATGTCGGTCGGGCTAGTAGAAAAGGTATCTTCGATTGTGGATGACCTGAAACAAAGGAAGGTTCATACTGACATTTTCACTTATAATCTTTGGATCAGCTCCTTGGCTGCAGCTTTAAATATCGATGGCGTTAGACGGGTTCTTGATGAGATGAAATGCGACCCCAATTCGAATGTAGATTGGGTGCGATATATTGATCTTGTGAACATCTATGTTACGTCAGCTCATCTATTGCATTCGGGGTCGAACTCCGTAGTCGAGTCTGAGAGTGGCATTACGCAGCGAGAATGGATTACATATGACCTCCTCGTTATCTTGTATGCTGGTCTTGGAAACAAAGACAAAATCGATCAGATTTGGAGATCATTAAGGATGACGAAGCAAAAGATGACAAGCAGAAACTACATTTGCATTCTTTCTTGTTACCTGATGCTTGATCATTTGAAGGAAATTGGAGAAGTTATTGATCAGTGGAAACAATCAACCACTACAGATTTTGATGTTTCTGCCTGTAACAGGCTTGTAAATGCGTTTGTTGAAGCTGGCTTGAATGAGAAAGCCAATAGTTTTGTTAACCTTTTGATTCAGAAGAACTGTAACCTCACAGAAGCAGAGTTGTAG

Protein sequence

MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLTEKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQKNCNLTEAEL

Homology

[Close]

BLAST of Spg003909 vs. NCBI nr
Match: XP_038888935.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X3 [Benincasa hispida])

HSP 1 Score: 523.9 bits (1348), Expect = 9.2e-145
Identity = 257/293 (87.71%), Postives = 274/293 (93.52%), Query Frame = 0


Query: 1   MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLT 60
           MVTHN+FELSDSDFA+RIDLMTKVFGIDAAERYFEGLP  +KTC+TYTALLHSFAGSKLT
Sbjct: 112 MVTHNEFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPTDSKTCETYTALLHSFAGSKLT 171

Query: 61  EKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLW 120
           EKAE +Y +I E ++PLTALPFNEMMTLYMSVG VEKVSSI+DDLKQR VH DIFTYNLW
Sbjct: 172 EKAESLYAKIMELDIPLTALPFNEMMTLYMSVGQVEKVSSIIDDLKQRMVHPDIFTYNLW 231

Query: 121 ISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESG 180
           ISSLA ALNIDGVR++L+EM   PNSN DWVRYIDLVNIYV SAHLLHSG NS+VESESG
Sbjct: 232 ISSLAGALNIDGVRQILNEMNQKPNSNEDWVRYIDLVNIYVKSAHLLHSGLNSLVESESG 291

Query: 181 ITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEI 240
           I+QREWITYDLL+ILYAGLGNKDKIDQIWRSL+MTKQKMTSRNYICILSCYLMLDHLKEI
Sbjct: 292 ISQREWITYDLLIILYAGLGNKDKIDQIWRSLKMTKQKMTSRNYICILSCYLMLDHLKEI 351

Query: 241 GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQKNCNLTEA 294
           GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKAN+FV LLIQKNC  TEA
Sbjct: 352 GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANNFVTLLIQKNCEPTEA 404

[Close]

BLAST of Spg003909 vs. NCBI nr
Match: XP_038888936.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X4 [Benincasa hispida])

HSP 1 Score: 523.9 bits (1348), Expect = 9.2e-145
Identity = 257/293 (87.71%), Postives = 274/293 (93.52%), Query Frame = 0


Query: 1   MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLT 60
           MVTHN+FELSDSDFA+RIDLMTKVFGIDAAERYFEGLP  +KTC+TYTALLHSFAGSKLT
Sbjct: 107 MVTHNEFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPTDSKTCETYTALLHSFAGSKLT 166

Query: 61  EKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLW 120
           EKAE +Y +I E ++PLTALPFNEMMTLYMSVG VEKVSSI+DDLKQR VH DIFTYNLW
Sbjct: 167 EKAESLYAKIMELDIPLTALPFNEMMTLYMSVGQVEKVSSIIDDLKQRMVHPDIFTYNLW 226

Query: 121 ISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESG 180
           ISSLA ALNIDGVR++L+EM   PNSN DWVRYIDLVNIYV SAHLLHSG NS+VESESG
Sbjct: 227 ISSLAGALNIDGVRQILNEMNQKPNSNEDWVRYIDLVNIYVKSAHLLHSGLNSLVESESG 286

Query: 181 ITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEI 240
           I+QREWITYDLL+ILYAGLGNKDKIDQIWRSL+MTKQKMTSRNYICILSCYLMLDHLKEI
Sbjct: 287 ISQREWITYDLLIILYAGLGNKDKIDQIWRSLKMTKQKMTSRNYICILSCYLMLDHLKEI 346

Query: 241 GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQKNCNLTEA 294
           GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKAN+FV LLIQKNC  TEA
Sbjct: 347 GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANNFVTLLIQKNCEPTEA 399

[Close]

BLAST of Spg003909 vs. NCBI nr
Match: XP_038888937.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X5 [Benincasa hispida])

HSP 1 Score: 523.9 bits (1348), Expect = 9.2e-145
Identity = 257/293 (87.71%), Postives = 274/293 (93.52%), Query Frame = 0


Query: 1   MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLT 60
           MVTHN+FELSDSDFA+RIDLMTKVFGIDAAERYFEGLP  +KTC+TYTALLHSFAGSKLT
Sbjct: 104 MVTHNEFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPTDSKTCETYTALLHSFAGSKLT 163

Query: 61  EKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLW 120
           EKAE +Y +I E ++PLTALPFNEMMTLYMSVG VEKVSSI+DDLKQR VH DIFTYNLW
Sbjct: 164 EKAESLYAKIMELDIPLTALPFNEMMTLYMSVGQVEKVSSIIDDLKQRMVHPDIFTYNLW 223

Query: 121 ISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESG 180
           ISSLA ALNIDGVR++L+EM   PNSN DWVRYIDLVNIYV SAHLLHSG NS+VESESG
Sbjct: 224 ISSLAGALNIDGVRQILNEMNQKPNSNEDWVRYIDLVNIYVKSAHLLHSGLNSLVESESG 283

Query: 181 ITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEI 240
           I+QREWITYDLL+ILYAGLGNKDKIDQIWRSL+MTKQKMTSRNYICILSCYLMLDHLKEI
Sbjct: 284 ISQREWITYDLLIILYAGLGNKDKIDQIWRSLKMTKQKMTSRNYICILSCYLMLDHLKEI 343

Query: 241 GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQKNCNLTEA 294
           GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKAN+FV LLIQKNC  TEA
Sbjct: 344 GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANNFVTLLIQKNCEPTEA 396

[Close]

BLAST of Spg003909 vs. NCBI nr
Match: XP_038888934.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 523.9 bits (1348), Expect = 9.2e-145
Identity = 257/293 (87.71%), Postives = 274/293 (93.52%), Query Frame = 0


Query: 1   MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLT 60
           MVTHN+FELSDSDFA+RIDLMTKVFGIDAAERYFEGLP  +KTC+TYTALLHSFAGSKLT
Sbjct: 114 MVTHNEFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPTDSKTCETYTALLHSFAGSKLT 173

Query: 61  EKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLW 120
           EKAE +Y +I E ++PLTALPFNEMMTLYMSVG VEKVSSI+DDLKQR VH DIFTYNLW
Sbjct: 174 EKAESLYAKIMELDIPLTALPFNEMMTLYMSVGQVEKVSSIIDDLKQRMVHPDIFTYNLW 233

Query: 121 ISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESG 180
           ISSLA ALNIDGVR++L+EM   PNSN DWVRYIDLVNIYV SAHLLHSG NS+VESESG
Sbjct: 234 ISSLAGALNIDGVRQILNEMNQKPNSNEDWVRYIDLVNIYVKSAHLLHSGLNSLVESESG 293

Query: 181 ITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEI 240
           I+QREWITYDLL+ILYAGLGNKDKIDQIWRSL+MTKQKMTSRNYICILSCYLMLDHLKEI
Sbjct: 294 ISQREWITYDLLIILYAGLGNKDKIDQIWRSLKMTKQKMTSRNYICILSCYLMLDHLKEI 353

Query: 241 GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQKNCNLTEA 294
           GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKAN+FV LLIQKNC  TEA
Sbjct: 354 GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANNFVTLLIQKNCEPTEA 406

[Close]

BLAST of Spg003909 vs. NCBI nr
Match: XP_038888933.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 523.9 bits (1348), Expect = 9.2e-145
Identity = 257/293 (87.71%), Postives = 274/293 (93.52%), Query Frame = 0


Query: 1   MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLT 60
           MVTHN+FELSDSDFA+RIDLMTKVFGIDAAERYFEGLP  +KTC+TYTALLHSFAGSKLT
Sbjct: 117 MVTHNEFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPTDSKTCETYTALLHSFAGSKLT 176

Query: 61  EKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLW 120
           EKAE +Y +I E ++PLTALPFNEMMTLYMSVG VEKVSSI+DDLKQR VH DIFTYNLW
Sbjct: 177 EKAESLYAKIMELDIPLTALPFNEMMTLYMSVGQVEKVSSIIDDLKQRMVHPDIFTYNLW 236

Query: 121 ISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESG 180
           ISSLA ALNIDGVR++L+EM   PNSN DWVRYIDLVNIYV SAHLLHSG NS+VESESG
Sbjct: 237 ISSLAGALNIDGVRQILNEMNQKPNSNEDWVRYIDLVNIYVKSAHLLHSGLNSLVESESG 296

Query: 181 ITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEI 240
           I+QREWITYDLL+ILYAGLGNKDKIDQIWRSL+MTKQKMTSRNYICILSCYLMLDHLKEI
Sbjct: 297 ISQREWITYDLLIILYAGLGNKDKIDQIWRSLKMTKQKMTSRNYICILSCYLMLDHLKEI 356

Query: 241 GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQKNCNLTEA 294
           GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKAN+FV LLIQKNC  TEA
Sbjct: 357 GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANNFVTLLIQKNCEPTEA 409

[Close]

BLAST of Spg003909 vs. ExPASy Swiss-Prot
Match: Q94B59 (Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g09450 PE=1 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 7.7e-94
Identity = 167/291 (57.39%), Postives = 225/291 (77.32%), Query Frame = 0


Query: 1   MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLT 60
           MV H + ++SD+D+A RIDL++KVFGIDAAERYFEGL I +KT +TYT+LLH++A SK T
Sbjct: 113 MVQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQT 172

Query: 61  EKAEIIYERIKETE-VPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNL 120
           E+AE +++RI E++ +   A+ +NEMMTLYMSVG VEKV  +++ LKQ+KV  DIFTYNL
Sbjct: 173 ERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNL 232

Query: 121 WISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESES 180
           W+SS AA  NID +R++L+EM+ D +SN  WVRYIDL +IY+ S+ + ++ S   VE+E 
Sbjct: 233 WLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEK 292

Query: 181 GITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKE 240
            I+QREWITYD L+IL+ GLGNK  IDQIW+SLR T Q ++SR+YIC+LS YLML HL+E
Sbjct: 293 SISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLRE 352

Query: 241 IGEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQKNCNL 291
             E+I QWK+S TT+FD SAC R++NAF + GL   A+ F  +L+   C+L
Sbjct: 353 AEEIIHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLILVHNKCSL 403

[Close]

BLAST of Spg003909 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.7e-43
Identity = 95/266 (35.71%), Postives = 152/266 (57.14%), Query Frame = 0


Query: 12  SDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLTEKAEIIYERIK 71
           SD A+ +DL+ K   I A E YF  LP  +KT  TY +LL+ +    LTEKAE +  ++K
Sbjct: 91  SDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMK 150

Query: 72  ETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISSLAAALNID 131
           E  +  +++ +N +MTLY   G  EKV +++ +LK   V  D +TYN+W+ +LAA  +I 
Sbjct: 151 ELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDIS 210

Query: 132 GVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGITQREWITYDL 191
           GV RV++EM  D     DW  Y ++ +IYV  A L      ++ E E   TQR++  Y  
Sbjct: 211 GVERVIEEMNRDGRVAPDWTTYSNMASIYV-DAGLSQKAEKALQELEMKNTQRDFTAYQF 270

Query: 192 LVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQST 251
           L+ LY  LG   ++ +IWRSLR+   K ++  Y+ ++   + L+ L     +  +W+ + 
Sbjct: 271 LITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANC 330

Query: 252 TTDFDVSACNRLVNAFVEAGLNEKAN 278
           +T +D+   N L+ A+ + GL +KAN
Sbjct: 331 ST-YDIRIVNVLIGAYAQEGLIQKAN 354

[Close]

BLAST of Spg003909 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 7.8e-38
Identity = 83/287 (28.92%), Postives = 155/287 (54.01%), Query Frame = 0


Query: 1   MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLT 60
           M  H   E+S+ D A+R+DL+ KV G+  AE++FE +P+  +    Y ALL+ +A  K+ 
Sbjct: 96  MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 155

Query: 61  EKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLW 120
            KAE +++ +KE       LP+N M+ LY+  G    V  ++ +++   V  DIFT N  
Sbjct: 156 HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTR 215

Query: 121 ISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESG 180
           + + +   +++G+ + L   + D   ++DW  Y D  N Y+  A L       + +SE  
Sbjct: 216 LHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYI-KAGLTEKALEMLRKSEQM 275

Query: 181 I-TQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKE 240
           +  Q+    Y++L+  Y   G K+++ ++W SL        +  YI ++S  L +D ++E
Sbjct: 276 VNAQKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEE 335

Query: 241 IGEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQK 287
           + +++++W+   +  FD+   + L+  + + G+ EKA   VN+L+QK
Sbjct: 336 VEKIMEEWEAGHSL-FDIRIPHLLITGYCKKGMMEKAEEVVNILVQK 379

[Close]

BLAST of Spg003909 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.3e-37
Identity = 83/289 (28.72%), Postives = 162/289 (56.06%), Query Frame = 0


Query: 1   MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLT 60
           MV     +L   D+AV +DL++K+ G+++AE++FE +P   +     T+LLHS+  +KL+
Sbjct: 119 MVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLS 178

Query: 61  EKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLW 120
           +KAE ++E++ E     + LP+N M+++Y+S G  EKV  ++ +LK R    DI TYNLW
Sbjct: 179 DKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLW 238

Query: 121 ISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESG 180
           +++ A+  +++G  +V  + K +   N DWV Y  L N+Y  + + +     ++ E E  
Sbjct: 239 LTAFASGNDVEGAEKVYLKAK-EEKLNPDWVTYSVLTNLYAKTDN-VEKARLALKEMEKL 298

Query: 181 ITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEI 240
           ++++  + Y  L+ L+A LG+KD ++  W+ ++ + +KM    Y+ ++S  + L   ++ 
Sbjct: 299 VSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQA 358

Query: 241 GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQKNCN 290
             + D+W+  + T  D    N ++  ++          F   +++K  N
Sbjct: 359 KGLYDEWESVSGTG-DARIPNLILAEYMNRDEVLLGEKFYERIVEKGIN 403

[Close]

BLAST of Spg003909 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 4.7e-35
Identity = 81/280 (28.93%), Postives = 154/280 (55.00%), Query Frame = 0


Query: 6   KFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLTEKAEI 65
           +F LS SD A+++DL+ KV GI  AE +F  LP + K  + Y +LL+++  +K  EKAE 
Sbjct: 131 RFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEA 190

Query: 66  IYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISSLA 125
           +   +++    L  LPFN MMTLYM++   +KV ++V ++KQ+ +  DI++YN+W+SS  
Sbjct: 191 LLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCG 250

Query: 126 AALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGITQRE 185
           +  +++ +  V  +MK D +   +W  +  +  +Y+          +++ + E+ IT R 
Sbjct: 251 SLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGE-TEKAEDALRKVEARITGRN 310

Query: 186 WITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVID 245
            I Y  L+ LY  LGNK ++ ++W   +     + +  Y  ++S  + +  ++   +V +
Sbjct: 311 RIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYE 370

Query: 246 QWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQ 286
           +W     + +D    N L+NA+V+    E A    + +++
Sbjct: 371 EW-LPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVE 408

[Close]

BLAST of Spg003909 vs. ExPASy TrEMBL
Match: A0A5D3C6J0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001890 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 2.7e-142
Identity = 249/293 (84.98%), Postives = 278/293 (94.88%), Query Frame = 0


Query: 1   MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLT 60
           MVTHNK +LSDSDFA+RIDLMTKVFG+DAAERYFEGLPI AKTC+TYTALLHSFAGSKLT
Sbjct: 114 MVTHNKSDLSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLT 173

Query: 61  EKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLW 120
           +KAE +YE+IKE+++PLTALPFNEMMTLY S+G VEKVSSIVDDLKQ+ VH DIFTYNLW
Sbjct: 174 DKAETLYEKIKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQKMVHPDIFTYNLW 233

Query: 121 ISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESG 180
           ISSLAAALNIDGV+++L+EM  +PNSN +WVRYI+LVNIY+ SA+LLHSGSNSVVES SG
Sbjct: 234 ISSLAAALNIDGVKQILNEMNQNPNSNENWVRYIELVNIYIKSANLLHSGSNSVVESASG 293

Query: 181 ITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEI 240
           I+QREWITYDLL+ILYAGLGNKD+IDQIWRSLRMTKQKMTSRNYICI+SCYLMLD LKEI
Sbjct: 294 ISQREWITYDLLIILYAGLGNKDRIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEI 353

Query: 241 GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQKNCNLTEA 294
           GEVIDQWKQSTTTDFD+S+CNRLVNAFVEAGLNEKANSFVN+LIQKNC+ T A
Sbjct: 354 GEVIDQWKQSTTTDFDISSCNRLVNAFVEAGLNEKANSFVNVLIQKNCDPTVA 406

[Close]

BLAST of Spg003909 vs. ExPASy TrEMBL
Match: A0A1S3C0B7 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495377 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 2.7e-142
Identity = 249/293 (84.98%), Postives = 278/293 (94.88%), Query Frame = 0


Query: 1   MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLT 60
           MVTHNK +LSDSDFA+RIDLMTKVFG+DAAERYFEGLPI AKTC+TYTALLHSFAGSKLT
Sbjct: 117 MVTHNKSDLSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLT 176

Query: 61  EKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLW 120
           +KAE +YE+IKE+++PLTALPFNEMMTLY S+G VEKVSSIVDDLKQ+ VH DIFTYNLW
Sbjct: 177 DKAETLYEKIKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQKMVHPDIFTYNLW 236

Query: 121 ISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESG 180
           ISSLAAALNIDGV+++L+EM  +PNSN +WVRYI+LVNIY+ SA+LLHSGSNSVVES SG
Sbjct: 237 ISSLAAALNIDGVKQILNEMNQNPNSNENWVRYIELVNIYIKSANLLHSGSNSVVESASG 296

Query: 181 ITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEI 240
           I+QREWITYDLL+ILYAGLGNKD+IDQIWRSLRMTKQKMTSRNYICI+SCYLMLD LKEI
Sbjct: 297 ISQREWITYDLLIILYAGLGNKDRIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEI 356

Query: 241 GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQKNCNLTEA 294
           GEVIDQWKQSTTTDFD+S+CNRLVNAFVEAGLNEKANSFVN+LIQKNC+ T A
Sbjct: 357 GEVIDQWKQSTTTDFDISSCNRLVNAFVEAGLNEKANSFVNVLIQKNCDPTVA 409

[Close]

BLAST of Spg003909 vs. ExPASy TrEMBL
Match: A0A1S3C072 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495377 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 2.7e-142
Identity = 249/293 (84.98%), Postives = 278/293 (94.88%), Query Frame = 0


Query: 1   MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLT 60
           MVTHNK +LSDSDFA+RIDLMTKVFG+DAAERYFEGLPI AKTC+TYTALLHSFAGSKLT
Sbjct: 114 MVTHNKSDLSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLT 173

Query: 61  EKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLW 120
           +KAE +YE+IKE+++PLTALPFNEMMTLY S+G VEKVSSIVDDLKQ+ VH DIFTYNLW
Sbjct: 174 DKAETLYEKIKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQKMVHPDIFTYNLW 233

Query: 121 ISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESG 180
           ISSLAAALNIDGV+++L+EM  +PNSN +WVRYI+LVNIY+ SA+LLHSGSNSVVES SG
Sbjct: 234 ISSLAAALNIDGVKQILNEMNQNPNSNENWVRYIELVNIYIKSANLLHSGSNSVVESASG 293

Query: 181 ITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEI 240
           I+QREWITYDLL+ILYAGLGNKD+IDQIWRSLRMTKQKMTSRNYICI+SCYLMLD LKEI
Sbjct: 294 ISQREWITYDLLIILYAGLGNKDRIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEI 353

Query: 241 GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQKNCNLTEA 294
           GEVIDQWKQSTTTDFD+S+CNRLVNAFVEAGLNEKANSFVN+LIQKNC+ T A
Sbjct: 354 GEVIDQWKQSTTTDFDISSCNRLVNAFVEAGLNEKANSFVNVLIQKNCDPTVA 406

[Close]

BLAST of Spg003909 vs. ExPASy TrEMBL
Match: A0A0A0K649 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066290 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 3.9e-141
Identity = 248/293 (84.64%), Postives = 277/293 (94.54%), Query Frame = 0


Query: 1   MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLT 60
           MV+HN+ ELSDSDFA+RIDLMTKVFG+DAAERYFEGLPI AKTC+TYTALLHSFAGSKLT
Sbjct: 117 MVSHNQSELSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLT 176

Query: 61  EKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLW 120
           +KAE +YE++KE+++PLTALPFNEMMTLY S+G VEKVSSIVDDLKQR VH DIFTYNLW
Sbjct: 177 DKAETLYEKMKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLW 236

Query: 121 ISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESG 180
           ISSLAAALNIDGV+++L+EM  +PNSN +WVRYI+LVNIYV SA+LLHS SNSVVES SG
Sbjct: 237 ISSLAAALNIDGVKQILNEMNHNPNSNENWVRYIELVNIYVKSANLLHSESNSVVESVSG 296

Query: 181 ITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEI 240
           I+QREWITYDLL+ILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICI+SCYLMLD LKEI
Sbjct: 297 ISQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEI 356

Query: 241 GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQKNCNLTEA 294
           GEVIDQWKQSTTTDFD+S+CNRLVNAF+EAGL+EKANSFVN+LIQKNC  TEA
Sbjct: 357 GEVIDQWKQSTTTDFDISSCNRLVNAFIEAGLHEKANSFVNVLIQKNCEPTEA 409

[Close]

BLAST of Spg003909 vs. ExPASy TrEMBL
Match: A0A6J1GLW9 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455447 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 7.4e-140
Identity = 251/293 (85.67%), Postives = 271/293 (92.49%), Query Frame = 0


Query: 1   MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLT 60
           MV+HN+ ELSDSDFA+RIDLMTKVFGIDAAERYFEGLPI+AKTC+TYTALLHSFAGSKLT
Sbjct: 117 MVSHNENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLT 176

Query: 61  EKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLW 120
           EKAE +YE++KE+ +PLTALPFNEMMTLY SVG VEKVSSIVDDLKQ KVH DIFTYNLW
Sbjct: 177 EKAETLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLW 236

Query: 121 ISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESG 180
           ISSLAA LNIDGVRR+LDEM  +PNSN  WVRYI+LVNIY+TSAHLLHS SNSVVESESG
Sbjct: 237 ISSLAATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESG 296

Query: 181 ITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEI 240
           ITQREWITYDLL+ILYAG+GNKDKIDQIWRSLRMT+QKMTSRNYICILSCYLMLDHLKEI
Sbjct: 297 ITQREWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEI 356

Query: 241 GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQKNCNLTEA 294
           GEVIDQWKQS++ DFDVSACNRLVNAFVEAG  EK NSFV +L  KNC  TEA
Sbjct: 357 GEVIDQWKQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL--KNCEPTEA 407

[Close]

BLAST of Spg003909 vs. TAIR 10
Match: AT5G09450.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 345.1 bits (884), Expect = 5.5e-95
Identity = 167/291 (57.39%), Postives = 225/291 (77.32%), Query Frame = 0


Query: 1   MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLT 60
           MV H + ++SD+D+A RIDL++KVFGIDAAERYFEGL I +KT +TYT+LLH++A SK T
Sbjct: 113 MVQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQT 172

Query: 61  EKAEIIYERIKETE-VPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNL 120
           E+AE +++RI E++ +   A+ +NEMMTLYMSVG VEKV  +++ LKQ+KV  DIFTYNL
Sbjct: 173 ERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNL 232

Query: 121 WISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESES 180
           W+SS AA  NID +R++L+EM+ D +SN  WVRYIDL +IY+ S+ + ++ S   VE+E 
Sbjct: 233 WLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEK 292

Query: 181 GITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKE 240
            I+QREWITYD L+IL+ GLGNK  IDQIW+SLR T Q ++SR+YIC+LS YLML HL+E
Sbjct: 293 SISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLRE 352

Query: 241 IGEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQKNCNL 291
             E+I QWK+S TT+FD SAC R++NAF + GL   A+ F  +L+   C+L
Sbjct: 353 AEEIIHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLILVHNKCSL 403

[Close]

BLAST of Spg003909 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 176.4 bits (446), Expect = 3.4e-44
Identity = 95/266 (35.71%), Postives = 152/266 (57.14%), Query Frame = 0


Query: 12  SDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLTEKAEIIYERIK 71
           SD A+ +DL+ K   I A E YF  LP  +KT  TY +LL+ +    LTEKAE +  ++K
Sbjct: 91  SDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMK 150

Query: 72  ETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISSLAAALNID 131
           E  +  +++ +N +MTLY   G  EKV +++ +LK   V  D +TYN+W+ +LAA  +I 
Sbjct: 151 ELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDIS 210

Query: 132 GVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGITQREWITYDL 191
           GV RV++EM  D     DW  Y ++ +IYV  A L      ++ E E   TQR++  Y  
Sbjct: 211 GVERVIEEMNRDGRVAPDWTTYSNMASIYV-DAGLSQKAEKALQELEMKNTQRDFTAYQF 270

Query: 192 LVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQST 251
           L+ LY  LG   ++ +IWRSLR+   K ++  Y+ ++   + L+ L     +  +W+ + 
Sbjct: 271 LITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANC 330

Query: 252 TTDFDVSACNRLVNAFVEAGLNEKAN 278
           +T +D+   N L+ A+ + GL +KAN
Sbjct: 331 ST-YDIRIVNVLIGAYAQEGLIQKAN 354

[Close]

BLAST of Spg003909 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 5.6e-39
Identity = 83/287 (28.92%), Postives = 155/287 (54.01%), Query Frame = 0


Query: 1   MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLT 60
           M  H   E+S+ D A+R+DL+ KV G+  AE++FE +P+  +    Y ALL+ +A  K+ 
Sbjct: 96  MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 155

Query: 61  EKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLW 120
            KAE +++ +KE       LP+N M+ LY+  G    V  ++ +++   V  DIFT N  
Sbjct: 156 HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTR 215

Query: 121 ISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESG 180
           + + +   +++G+ + L   + D   ++DW  Y D  N Y+  A L       + +SE  
Sbjct: 216 LHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYI-KAGLTEKALEMLRKSEQM 275

Query: 181 I-TQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKE 240
           +  Q+    Y++L+  Y   G K+++ ++W SL        +  YI ++S  L +D ++E
Sbjct: 276 VNAQKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEE 335

Query: 241 IGEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQK 287
           + +++++W+   +  FD+   + L+  + + G+ EKA   VN+L+QK
Sbjct: 336 VEKIMEEWEAGHSL-FDIRIPHLLITGYCKKGMMEKAEEVVNILVQK 379

[Close]

BLAST of Spg003909 vs. TAIR 10
Match: AT2G20710.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 5.6e-39
Identity = 83/287 (28.92%), Postives = 155/287 (54.01%), Query Frame = 0


Query: 1   MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLT 60
           M  H   E+S+ D A+R+DL+ KV G+  AE++FE +P+  +    Y ALL+ +A  K+ 
Sbjct: 1   MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 60

Query: 61  EKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLW 120
            KAE +++ +KE       LP+N M+ LY+  G    V  ++ +++   V  DIFT N  
Sbjct: 61  HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTR 120

Query: 121 ISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESG 180
           + + +   +++G+ + L   + D   ++DW  Y D  N Y+  A L       + +SE  
Sbjct: 121 LHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYI-KAGLTEKALEMLRKSEQM 180

Query: 181 I-TQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKE 240
           +  Q+    Y++L+  Y   G K+++ ++W SL        +  YI ++S  L +D ++E
Sbjct: 181 VNAQKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEE 240

Query: 241 IGEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQK 287
           + +++++W+   +  FD+   + L+  + + G+ EKA   VN+L+QK
Sbjct: 241 VEKIMEEWEAGHSL-FDIRIPHLLITGYCKKGMMEKAEEVVNILVQK 284

[Close]

BLAST of Spg003909 vs. TAIR 10
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-38
Identity = 83/289 (28.72%), Postives = 162/289 (56.06%), Query Frame = 0


Query: 1   MVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCKTYTALLHSFAGSKLT 60
           MV     +L   D+AV +DL++K+ G+++AE++FE +P   +     T+LLHS+  +KL+
Sbjct: 119 MVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLS 178

Query: 61  EKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLW 120
           +KAE ++E++ E     + LP+N M+++Y+S G  EKV  ++ +LK R    DI TYNLW
Sbjct: 179 DKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLW 238

Query: 121 ISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESG 180
           +++ A+  +++G  +V  + K +   N DWV Y  L N+Y  + + +     ++ E E  
Sbjct: 239 LTAFASGNDVEGAEKVYLKAK-EEKLNPDWVTYSVLTNLYAKTDN-VEKARLALKEMEKL 298

Query: 181 ITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEI 240
           ++++  + Y  L+ L+A LG+KD ++  W+ ++ + +KM    Y+ ++S  + L   ++ 
Sbjct: 299 VSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQA 358

Query: 241 GEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANSFVNLLIQKNCN 290
             + D+W+  + T  D    N ++  ++          F   +++K  N
Sbjct: 359 KGLYDEWESVSGTG-DARIPNLILAEYMNRDEVLLGEKFYERIVEKGIN 403

The following BLAST results are available for this feature:

BLAST of Spg003909 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888935.1	9.2e-145	87.71	pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X3 ...	[more]
XP_038888936.1	9.2e-145	87.71	pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X4 ...	[more]
XP_038888937.1	9.2e-145	87.71	pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X5 ...	[more]
XP_038888934.1	9.2e-145	87.71	pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X2 ...	[more]
XP_038888933.1	9.2e-145	87.71	pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 ...	[more]

BLAST of Spg003909 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94B59	7.7e-94	57.39	Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidop...	[more]
O22714	4.7e-43	35.71	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]
Q9SKU6	7.8e-38	28.92	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
Q9SY07	2.3e-37	28.72	Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop...	[more]
Q8LPS6	4.7e-35	28.93	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]

BLAST of Spg003909 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C6J0	2.7e-142	84.98	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C0B7	2.7e-142	84.98	pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 ...	[more]
A0A1S3C072	2.7e-142	84.98	pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X2 ...	[more]
A0A0A0K649	3.9e-141	84.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066290 PE=4 SV=1	[more]
A0A6J1GLW9	7.4e-140	85.67	pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 ...	[more]

BLAST of Spg003909 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09450.1	5.5e-95	57.39	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G60770.1	3.4e-44	35.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20710.1	5.6e-39	28.92	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20710.2	5.6e-39	28.92	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G02820.1	1.6e-38	28.72	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 44..143 e-value: 3.5E-10 score: 41.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 176..295 e-value: 2.4E-6 score: 29.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 115..142 e-value: 0.015 score: 15.5 coord: 46..72 e-value: 0.13 score: 12.5
None	No IPR available	PANTHER	PTHR45717:SF4	BNAC02G00860D PROTEIN	coord: 1..292
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 1..292

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003909.1	Spg003909.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding