Spg003817 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003817
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	flowering locus K homology domain
Location	scaffold4: 46311602 .. 46316312 (+)
RNA-Seq Expression	Spg003817
Synteny	Spg003817

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGACGTGGACCAAAACTATACGCATGTTGACGATAATCAGGTAGATGAGAGTGCACAAATATATGAGAATGCTCAAGTACAGGACACTACACTGGAACAGGAGAATATACAGGAGCCAGAGAACTTGCATGAAATTGAGAATGAACATGTACCGGAAACCTTAGAGTCTGAGCCAAAACAGGTGCATAATGAGGATCCTCTGGCTGTAGTAGGTGAGAAGAAGTGGCCTGGATGGCCAGGAGAGAGTGTTTTTCGGATGCTGGTTCCTGCACAAAAGGTTGGTAGTATAATTGGTCGCAAAGGTGAGTTTATCAAGAAAATAGTTGAGGAAACGAGAGCTCGGATTAAAATTCTTGATGGTCCTCCAGGAACAGCCGAAAGAGCTGTAAGTTTTTCTCCCTTCGGATAGGAACTTTTCTCTAATAATTTATCTAGTTTTCTTGTGTAAATTATTTGGATTTAGGGAGGTGCAGATGATTTAATATCAAATTAACGTGGTCTATCCAGTTTCTATTTTTTATCTTAATGGATATTGAGGCTTCATTAAAAATTATTGTTTTAGGTTTTCTTAATTTTCGTATTCTCAATATGTATAGCACCTTGTTTCAAGGTAGGCAAATATAGGGCATTGCATGACTTGATTAGCCCAATCTGCTTGAGCTTCGAGTTTGGGTGATTGTTAATTATTTTTAGTCAATTGTTAATCTCTTTTGGACTCTTGGTTTGTCATATTGAAGCACGTGACATCAGTTATAAGGCTGTATAATGATGAAAACATGACACTGAAGATCCCTAGGAGAATTTCAGACTATGAAGAGTTAATAAAATATTATCATTAATAATTTGAATAGAACTTGTACTAAAAGCCATTAAATCATTGATAAAAAAAATTTGAAGTTGGATAATGTTCTAAAATTCTTCTGAGTCATGAAACAAACATTTGATCATATTAAACCACTCGGCAAACTTAAAATGGATCTGCTAACAGTTATGGGGAAGCTGCATCTTTCAAAGATATCTGTGCTTTTACACCCCATCAATGGGTGTTAAACATGATTCTCTTTCAGCTTTATAACTGCCAAAAGGAAATGTCCAGAAACTAAGATCGACCCTTTAAACATGTAAAAACAACATTATAAATAAAACAAAAAGGAAAGTAAGACTAATCCAGGTAATCCAAAAATATGGATACAGTTGCCTTGATTGTAGTAACAAAAATGAATCTGTGCAGGTTGTGTGCAAACTTTAAGGCAACGACTCAATCTTCAATAGGATTCCATATTTGAAGAACCAAAGATCCAGATGCGGGGATCAGCATTCAACATTACAAAGTTCTGAAAAGTTGATCTGAATAACACGTAGGCATCTGGAACTTTTGTACCACGAAGCACTGCAATATCTCTGGTAACTTCAGATCTGAAGATTGATGTCAAGATTTCCAACGGGATAATAGATATGAAAAATGGAGAAAACATAATGATAAATGTTAAGAGTTAAAAATTCTAGTAATTTTAAAGATGTTTACACACGATTAAAGATATGCTTAAAATAAAAATTGAGGCTCTAATACTGGCCAATCAATATCAAATAGAAGTGATGTGTTTTTGCTTATGCTTCTATTGCGTCTTTGCCAATAACTGGGTCTATAATCCAACAACATATGAAGTAATGAAGTAATACTGTGAAAACCTAAACTCATTAATTTAAAAATGAGGAAAACATAATTATATTATCTAATTTCTTGAAACACTGAAAGCTGGTAAATAACCTCCGTGTTCAAAACTGGCTCACAAATTTCAACATTTGCTGCACGGTTCTTTTGATCCGTTATCCTCGTATATATTTGCATCCTCTAAGATGTGCCTTGCATGATAAATTGGAGGAAGAAATCATCCATCGTTTTGGCCCTTGCCTCTTCAGATGTATAGTTTGGGAGAAATATTTTTGAATTGTTTGGTCTGCCTGATAGTTTTGGCAACTTTATTATTCTAATTACAAGGTGCTCAAAATTAAATTAAGAGGTTAAGCAAGTTTGATGAGTAAGGGTTTGGACATCTTGTGGGAGATCTTAATGGTAACTAATATGAATAGTTTTTGAAGGCCACTGTGGTATATGTAGTGCGTGTACATTTTGTGGCATCTTTATGGTCCTTGCAGATAAATTGAATTCGTTGTAGGCCATACAAATCGGGGGAGGGACTCTTTTTGTTATTTCCTTTTTTTCCCCTACGATTGGATGCCCAACAAAATCTATAAGTGCATTTAGCATAAGTGGATGTTTGTGCAAATAAACTGATCTGCTACTATTTTTATCTTTTCTCAGAAGTGTATTTAGTAGTGAAATTGTATCTTTAGAGGTTGTGGATTGTGATTGGAATGTCCTTTGTTATTTTCTATAGATGTTATAAAATGATTCTGTCTTTTCATTGGTGGGCATTTCATGTGTTTTCCCTGCCATGGTCTCTCACTAGCTGGCTTTGAAATCTGACCAATTATTTTTGCTTTGTATTTGTTATATGAGCGGTTCTGTCTCTTTTGAACCGGGAATTTCAGGTTCTAGTAATAATTACCTATTTGATATTTTTCCTTGTGGTCTTAGTCAATTTGTGATGAAAATTTGTAGTTCTCACAAGATTGTATGCTTCATTTAATAGGTAATGGTGTCTGCTAAGGAGGAACCCGATTCTGCTTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGCATTGTTGATGGTCTGGAGGGTGATAATGCTCATGCTCCCAACATGGCAGGTAAAGTCTCAACGAGACTGCTAGTGGCAGCTTCACAAGCGGGAAGTTTGATTGGGAAGCAGGGAGGGACTGTTAAATCCATTCAAGAAGAGTCAAATTGTATAGTTAGAGTTCTTGGAACAGGTGACTTCTCTAGATGCAATTTGATTCTCTGCTTTATTGTTCTTATATTTGTCAATAGAAACATGTCTTTATTTGCCATCTACTTCATCTGTTTCTGAATTGATAATTATATACTCCGTTTTGGTTTTCCCTTTTCAATGCATCATCCTTACCCAATGTCATCTGGGAATTTGCTGCAGAAGATTTACCTGTTTTTGCTCTCCAAGACGATAGAGTTGTTGAAGTACTAGGTGATCCAGCCGGCGTGCACAAAGCAGTGGAACTCATTGCTTCTCATCTTAGAAAGTTTCTGGTTGACCGAAGTATTATCCCAGTTTTTGAAATGAATGTGAGTATGGTTTCCTAATGATTTTTCAACCACTTCCATTTTTAGAAGTAATTGAAGTCTTAACTATTCCTACTCTCCCATCCAACCCGAATGCCCAAAAATCAGATGCAGATGTCAAATCCACAGATGGAGCACATGCCACCACCACACCAATCATGGGGCCCGCCTCAAGGAATGCCACCAAATGCTGGGGGTGGTCCTGGCTTTGGCCCGAATCCTCAATACATGCCACCACCTCGTCAATTCGACAATTACTATCCACCTGCTGATATGCCATCGGTTATGGATAAGCAACCTCATCATGGGATTTCTGCTTATGGAAGGGAAGCTCCTATGGGTGTTCATACATCATCGAATGCACAGTCAGCGCCTTCAATTGTCACACAGGTTAGATAAGCCTTTGAACTCTTATGTTTGATGTGGCTTTGCAAACTCTTTAAAGTTTTTCAAAAGTAATTCTGAAGTGGTGCTTGTGTTGCATTCATGTTTCTAATCCTATCCCATTTTCTGATTGCTAAGACAAGAAACATGTTAATTGCATGCTGAGTCATTGAGTTAAAAGTGTTCGCTCATTAAACACTTGCCGTTTGGCCTAATCCCATGGTTTCTCAGATTTTCATTCTACAAATACTTGGGAGCACCCTTGAGAGACTTGTTAGTGAATATTTTAAGATATTCAGAATGGTTTTTGTTGTACTTGCAGACAACTCAACAAATGCAGATTCCATTATCTTTTGCTGATGCTGTTATTGGAACTGCCGGTGCTAGTATAAGCTACATTCGTCGTGCTAGTGGGGCGACTGTTACCATCCAAGAAACGAGGGGAGTCCCTGGGGAAATGACGGTAGAAATGAGTGGAACTGCTTCTCAAGTTCAAGCAGCCCAGCAGCTTATACAGGCAATTATTTTTTCTGGTTCTTTTTGATTTTGCATCTTCTTCAATATGAAGACTTTAGATATGATGTCAACTTTCAATAATAAGTTCTTTTAGTTATAAATTTTTTTTCTGGTTGCTTGACTTGATGATGACTTGGTGAAGATGTAGACCTCAATCCATTTGGGCATCCAGCCGAGATAACTTTTCTCATTCTTTGAAAAAGTACATTCTTTACAAACAAAAGTCGGGGAAGCTCTAACTAACCGTGGACATTGTACAAGTTCTTGTTGAATCATGGCTTAATGTTTTCTTCAGGAGTTGTTCTTTTTTAGACCTGATTAATATTAATTTGAAGGAAACATTACTGCCCTTTGGTTGCTAACAGAGGCCTCTAAACATCCTTGTTTAATTGTGTTGCAGAATTTTATGGCCGGTGCTGGAGCTCCAGCCCAGACTCAAGCTGGGGGTTCGACAGACCAAGGCTACAACTCTTATGCTGCTCACGGTTCAGTCTATGCATCTCCCCCTGCAAACCCGGCTCATGCTAGTCATGCTGGAGGCTATGGCTCTGTCTACGGTACGAATTATGGATACTGA

mRNA sequence

ATGGCTGACGTGGACCAAAACTATACGCATGTTGACGATAATCAGGTAGATGAGAGTGCACAAATATATGAGAATGCTCAAGTACAGGACACTACACTGGAACAGGAGAATATACAGGAGCCAGAGAACTTGCATGAAATTGAGAATGAACATGTACCGGAAACCTTAGAGTCTGAGCCAAAACAGGTGCATAATGAGGATCCTCTGGCTGTAGTAGGTGAGAAGAAGTGGCCTGGATGGCCAGGAGAGAGTGTTTTTCGGATGCTGGTTCCTGCACAAAAGGTTGGTAGTATAATTGGTCGCAAAGGTGAGTTTATCAAGAAAATAGTTGAGGAAACGAGAGCTCGGATTAAAATTCTTGATGGTCCTCCAGGAACAGCCGAAAGAGCTGCATCTGGAACTTTTGTACCACGAAGCACTGCAATATCTCTGGTAATGGTGTCTGCTAAGGAGGAACCCGATTCTGCTTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGCATTGTTGATGGTCTGGAGGGTGATAATGCTCATGCTCCCAACATGGCAGGTAAAGTCTCAACGAGACTGCTAGTGGCAGCTTCACAAGCGGGAAGTTTGATTGGGAAGCAGGGAGGGACTGTTAAATCCATTCAAGAAGAGTCAAATTGTATAGTTAGAGTTCTTGGAACAGAAGATTTACCTGTTTTTGCTCTCCAAGACGATAGAGTTGTTGAAGTACTAGGTGATCCAGCCGGCGTGCACAAAGCAGTGGAACTCATTGCTTCTCATCTTAGAAAGTTTCTGGTTGACCGAAGTATTATCCCAGTTTTTGAAATGAATATGGAGCACATGCCACCACCACACCAATCATGGGGCCCGCCTCAAGGAATGCCACCAAATGCTGGGGGTGGTCCTGGCTTTGGCCCGAATCCTCAATACATGCCACCACCTCGTCAATTCGACAATTACTATCCACCTGCTGATATGCCATCGGTTATGGATAAGCAACCTCATCATGGGATTTCTGCTTATGGAAGGGAAGCTCCTATGGGTGTTCATACATCATCGAATGCACAGTCAGCGCCTTCAATTGTCACACAGACAACTCAACAAATGCAGATTCCATTATCTTTTGCTGATGCTGTTATTGGAACTGCCGGTGCTAGTATAAGCTACATTCGTCGTGCTAGTGGGGCGACTGTTACCATCCAAGAAACGAGGGGAGTCCCTGGGGAAATGACGGTAGAAATGAGTGGAACTGCTTCTCAAGTTCAAGCAGCCCAGCAGCTTATACAGGCAATTATTTTTTCTGAGGCCTCTAAACATCCTTGTTTAATTGTGTTGCAGAATTTTATGGCCGGTGCTGGAGCTCCAGCCCAGACTCAAGCTGGGGGTTCGACAGACCAAGGCTACAACTCTTATGCTGCTCACGGTTCAGTCTATGCATCTCCCCCTGCAAACCCGGCTCATGCTAGTCATGCTGGAGGCTATGGCTCTGTCTACGGTACGAATTATGGATACTGA

Coding sequence (CDS)

ATGGCTGACGTGGACCAAAACTATACGCATGTTGACGATAATCAGGTAGATGAGAGTGCACAAATATATGAGAATGCTCAAGTACAGGACACTACACTGGAACAGGAGAATATACAGGAGCCAGAGAACTTGCATGAAATTGAGAATGAACATGTACCGGAAACCTTAGAGTCTGAGCCAAAACAGGTGCATAATGAGGATCCTCTGGCTGTAGTAGGTGAGAAGAAGTGGCCTGGATGGCCAGGAGAGAGTGTTTTTCGGATGCTGGTTCCTGCACAAAAGGTTGGTAGTATAATTGGTCGCAAAGGTGAGTTTATCAAGAAAATAGTTGAGGAAACGAGAGCTCGGATTAAAATTCTTGATGGTCCTCCAGGAACAGCCGAAAGAGCTGCATCTGGAACTTTTGTACCACGAAGCACTGCAATATCTCTGGTAATGGTGTCTGCTAAGGAGGAACCCGATTCTGCTTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGCATTGTTGATGGTCTGGAGGGTGATAATGCTCATGCTCCCAACATGGCAGGTAAAGTCTCAACGAGACTGCTAGTGGCAGCTTCACAAGCGGGAAGTTTGATTGGGAAGCAGGGAGGGACTGTTAAATCCATTCAAGAAGAGTCAAATTGTATAGTTAGAGTTCTTGGAACAGAAGATTTACCTGTTTTTGCTCTCCAAGACGATAGAGTTGTTGAAGTACTAGGTGATCCAGCCGGCGTGCACAAAGCAGTGGAACTCATTGCTTCTCATCTTAGAAAGTTTCTGGTTGACCGAAGTATTATCCCAGTTTTTGAAATGAATATGGAGCACATGCCACCACCACACCAATCATGGGGCCCGCCTCAAGGAATGCCACCAAATGCTGGGGGTGGTCCTGGCTTTGGCCCGAATCCTCAATACATGCCACCACCTCGTCAATTCGACAATTACTATCCACCTGCTGATATGCCATCGGTTATGGATAAGCAACCTCATCATGGGATTTCTGCTTATGGAAGGGAAGCTCCTATGGGTGTTCATACATCATCGAATGCACAGTCAGCGCCTTCAATTGTCACACAGACAACTCAACAAATGCAGATTCCATTATCTTTTGCTGATGCTGTTATTGGAACTGCCGGTGCTAGTATAAGCTACATTCGTCGTGCTAGTGGGGCGACTGTTACCATCCAAGAAACGAGGGGAGTCCCTGGGGAAATGACGGTAGAAATGAGTGGAACTGCTTCTCAAGTTCAAGCAGCCCAGCAGCTTATACAGGCAATTATTTTTTCTGAGGCCTCTAAACATCCTTGTTTAATTGTGTTGCAGAATTTTATGGCCGGTGCTGGAGCTCCAGCCCAGACTCAAGCTGGGGGTTCGACAGACCAAGGCTACAACTCTTATGCTGCTCACGGTTCAGTCTATGCATCTCCCCCTGCAAACCCGGCTCATGCTAGTCATGCTGGAGGCTATGGCTCTGTCTACGGTACGAATTATGGATACTGA

Protein sequence

MADVDQNYTHVDDNQVDESAQIYENAQVQDTTLEQENIQEPENLHEIENEHVPETLESEPKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAASGTFVPRSTAISLVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMAGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMNMEHMPPPHQSWGPPQGMPPNAGGGPGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHTSSNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQAIIFSEASKHPCLIVLQNFMAGAGAPAQTQAGGSTDQGYNSYAAHGSVYASPPANPAHASHAGGYGSVYGTNYGY

Homology

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BLAST of Spg003817 vs. NCBI nr
Match: KAG7030320.1 (Flowering locus K-likey domain protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 844.7 bits (2181), Expect = 4.0e-241
Identity = 455/527 (86.34%), Postives = 467/527 (88.61%), Query Frame = 0


Query: 1   MADVDQNYTHVDDNQVDESAQIYENAQVQDTTLEQENIQEPENLHEIENEHVPETLES-E 60
           MADVDQ+Y HVDD++VDE+ QIYEN QVQDTTLEQ+N QEPENLHE++NEH+P TLES E
Sbjct: 13  MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 72

Query: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 73  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 132

Query: 121 LDGPPGTAERAASGTFVPRSTAISLVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDN 180
           LDGPPGTAERA              VMVSAKEEPDSAFPPAVDGLLRVH RIVDGLEGDN
Sbjct: 133 LDGPPGTAERA--------------VMVSAKEEPDSAFPPAVDGLLRVHNRIVDGLEGDN 192

Query: 181 AHAPNMAGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDR 240
           AHAPNM GKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDR
Sbjct: 193 AHAPNMGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDR 252

Query: 241 VVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMN-------MEHMPPP-HQSWGPP 300
           VVEVLGDP  VHKAVELIASHLRKFLVDRSIIPVFEMN       MEHMPPP HQ WGPP
Sbjct: 253 VVEVLGDPTSVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNPQMEHMPPPQHQPWGPP 312

Query: 301 QGMPPNAGGGPGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHT 360
           QG+PPNAGGGPGFGPNPQYMPPPRQFD+YYPPADMPSVMDKQPHHGISAYGREAPMGVH 
Sbjct: 313 QGIPPNAGGGPGFGPNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHA 372

Query: 361 SSNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT 420
           +SNAQS PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT
Sbjct: 373 ASNAQSVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT 432

Query: 421 VEMSGTASQVQAAQQLIQAIIFSEASKHPCLI-------------VLQNFMAGAGAPAQT 480
           VEMSGTASQVQAAQQLIQAIIFS  S   C+I              L NFMAGAGA AQ 
Sbjct: 433 VEMSGTASQVQAAQQLIQAIIFS-GSFLFCIIFNMRTLDMMFKLEFLANFMAGAGASAQA 492

Query: 481 QAGGSTDQGYNSYAAHGSVYASPPANPAHASHA-GGYGSVYGTNYGY 505
           QAGGSTDQGYNSYA HGSVYASPPAN AHASHA GGYGSVYGTNYGY
Sbjct: 493 QAGGSTDQGYNSYAGHGSVYASPPANQAHASHAGGGYGSVYGTNYGY 524

[Close]

BLAST of Spg003817 vs. NCBI nr
Match: XP_022143057.1 (flowering locus K homology domain [Momordica charantia] >XP_022143058.1 flowering locus K homology domain [Momordica charantia])

HSP 1 Score: 841.6 bits (2173), Expect = 3.4e-240
Identity = 449/513 (87.52%), Postives = 458/513 (89.28%), Query Frame = 0


Query: 1   MADVDQNYTHVDDNQVDESAQIYENAQVQDTTLEQENIQEPENLHEIENEHVPETLESEP 60
           MADVDQNYTHV+DNQVDE+ QIYENAQ QD TLEQ+N QEPE LHE+ENEHV ETLE E 
Sbjct: 1   MADVDQNYTHVEDNQVDENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQETLEPEQ 60

Query: 61  KQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 120
           KQVHNED LAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL
Sbjct: 61  KQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 120

Query: 121 DGPPGTAERAASGTFVPRSTAISLVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNA 180
           DGPPGTAERA              VMVSAKEEPDS FPPAVDGLLRVHKRIVDGLEGDNA
Sbjct: 121 DGPPGTAERA--------------VMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNA 180

Query: 181 HAPNMAGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRV 240
           HAP+M GKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLG+EDLPVFALQDDRV
Sbjct: 181 HAPSMGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRV 240

Query: 241 VEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMN-------MEHMPPPHQSWGPPQG 300
           VEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMN       M+HMPPPHQSWGPPQG
Sbjct: 241 VEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQG 300

Query: 301 MPPNAGGGPGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHTSS 360
           MPPNAGGGPGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVH SS
Sbjct: 301 MPPNAGGGPGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASS 360

Query: 361 NAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVE 420
           NAQ+APSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVE
Sbjct: 361 NAQAAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVE 420

Query: 421 MSGTASQVQAAQQLIQAIIFSEASKHPCLIVLQNFMAGAGAPAQTQAGGSTDQGYNSY-A 480
           MSGTASQVQAAQQLI                 QNFMAGAGAPAQ QAG +TDQGYNSY A
Sbjct: 421 MSGTASQVQAAQQLI-----------------QNFMAGAGAPAQAQAGATTDQGYNSYAA 480

Query: 481 AHGSVYASPPANP-AHASHAGGYGSVYGTNYGY 505
           AHGSVYASPPANP AHA HAGGYGSVYGTNYGY
Sbjct: 481 AHGSVYASPPANPAAHAGHAGGYGSVYGTNYGY 482

[Close]

BLAST of Spg003817 vs. NCBI nr
Match: XP_023538035.1 (flowering locus K homology domain-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 839.0 bits (2166), Expect = 2.2e-239
Identity = 448/518 (86.49%), Postives = 459/518 (88.61%), Query Frame = 0


Query: 1   MADVDQNYTHVDDNQVDESAQI------YENAQVQDTTLEQENIQEPENLHEIENEHVPE 60
           MADV+Q+YTHVDDN+VDE+AQI      YENAQVQD TLEQE+ +EPENLH +ENEHVPE
Sbjct: 1   MADVEQSYTHVDDNEVDETAQIYENAQLYENAQVQDNTLEQESTEEPENLHGLENEHVPE 60

Query: 61  TLESEPKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 120
           TLE EPK+VHNED LAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR
Sbjct: 61  TLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 120

Query: 121 ARIKILDGPPGTAERAASGTFVPRSTAISLVMVSAKEEPDSAFPPAVDGLLRVHKRIVDG 180
           ARIKILDGPPGTAERA              VMVSAKEEPDS FPPAVDGLLRVHKRIVDG
Sbjct: 121 ARIKILDGPPGTAERA--------------VMVSAKEEPDSDFPPAVDGLLRVHKRIVDG 180

Query: 181 LEGDNAHAPNMAGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFA 240
           LEGDNA+APNM GKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLG+EDLPVFA
Sbjct: 181 LEGDNANAPNMGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFA 240

Query: 241 LQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMN-------MEHMPPPHQS 300
           LQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMN       MEHMPPPHQS
Sbjct: 241 LQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQMEHMPPPHQS 300

Query: 301 WGPPQGMPPNAGGGPGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPM 360
           WGPPQGMPPNAGGGPGFGPNP YMPPPRQFDNYYPPADMPS MDKQPHHGISAYGREAPM
Sbjct: 301 WGPPQGMPPNAGGGPGFGPNPPYMPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPM 360

Query: 361 GVHTSSNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVP 420
           GVH  +NAQS PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVP
Sbjct: 361 GVHPQTNAQSVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVP 420

Query: 421 GEMTVEMSGTASQVQAAQQLIQAIIFSEASKHPCLIVLQNFMAGAGAPAQTQAGGSTDQG 480
           GEMTVEMSGTASQVQAAQQLI                 QNFMAGAGAPAQTQAGGS DQG
Sbjct: 421 GEMTVEMSGTASQVQAAQQLI-----------------QNFMAGAGAPAQTQAGGSADQG 480

Query: 481 YNSYAAHGSVYASPP-ANPAHASHAGGYGSVYGTNYGY 505
           YNSYAAHGSVYASPP ANPAHASHAGGYGSVY TNYGY
Sbjct: 481 YNSYAAHGSVYASPPAANPAHASHAGGYGSVYSTNYGY 487

[Close]

BLAST of Spg003817 vs. NCBI nr
Match: XP_023546728.1 (flowering locus K homology domain-like [Cucurbita pepo subsp. pepo] >XP_023546729.1 flowering locus K homology domain-like [Cucurbita pepo subsp. pepo] >XP_023546731.1 flowering locus K homology domain-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 835.9 bits (2158), Expect = 1.9e-238
Identity = 446/514 (86.77%), Postives = 457/514 (88.91%), Query Frame = 0


Query: 1   MADVDQNYTHVDDNQVDESAQIYENAQVQDTTLEQENIQEPENLHEIENEHVPETLES-E 60
           MADVDQ+Y HVDD++VDE+ QIYEN QVQDTTLEQ+N QEPENLHE++NEH+P TLES E
Sbjct: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 60

Query: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAASGTFVPRSTAISLVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDN 180
           LDGPPGTAERA              VMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDN
Sbjct: 121 LDGPPGTAERA--------------VMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDN 180

Query: 181 AHAPNMAGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDR 240
           AH PNM GKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDR
Sbjct: 181 AHTPNMGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDR 240

Query: 241 VVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMN-------MEHMPPP-HQSWGPP 300
           VVEVLGDP  VHKAVELIASHLRKFLVDRSIIPVFEMN       MEHMPPP HQ WGPP
Sbjct: 241 VVEVLGDPTSVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNPQMEHMPPPQHQPWGPP 300

Query: 301 QGMPPNAGGGPGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHT 360
           QG+PPNAGGGPGFGPNPQYMPPPRQFD+YYPPADMPSVMDKQPHHGISAYGREAPMGVH 
Sbjct: 301 QGIPPNAGGGPGFGPNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHA 360

Query: 361 SSNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT 420
           +SNAQS PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT
Sbjct: 361 ASNAQSVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT 420

Query: 421 VEMSGTASQVQAAQQLIQAIIFSEASKHPCLIVLQNFMAGAGAPAQTQAGGSTDQGYNSY 480
           VEMSGTASQVQAAQQLI                 QNFMAGAGA AQ QAGGSTDQGYNSY
Sbjct: 421 VEMSGTASQVQAAQQLI-----------------QNFMAGAGASAQAQAGGSTDQGYNSY 480

Query: 481 AAHGSVYASPPANPAHASHA-GGYGSVYGTNYGY 505
           A HGSVYASPPAN AHASHA GGYGSVYGTNYGY
Sbjct: 481 AGHGSVYASPPANQAHASHAGGGYGSVYGTNYGY 483

[Close]

BLAST of Spg003817 vs. NCBI nr
Match: XP_022946120.1 (flowering locus K homology domain-like [Cucurbita moschata] >XP_022946121.1 flowering locus K homology domain-like [Cucurbita moschata] >XP_022946122.1 flowering locus K homology domain-like [Cucurbita moschata])

HSP 1 Score: 835.5 bits (2157), Expect = 2.4e-238
Identity = 446/514 (86.77%), Postives = 457/514 (88.91%), Query Frame = 0


Query: 1   MADVDQNYTHVDDNQVDESAQIYENAQVQDTTLEQENIQEPENLHEIENEHVPETLES-E 60
           MADVDQ+Y HVDD++VDE+ QIYEN QVQDTTLEQ+N QEPENLHE++NEH+P TLES E
Sbjct: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 60

Query: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAASGTFVPRSTAISLVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDN 180
           LDGPPGTAERA              VMVSAKEEPDSAFPPAVDGLLRVH RIVDGLEGDN
Sbjct: 121 LDGPPGTAERA--------------VMVSAKEEPDSAFPPAVDGLLRVHNRIVDGLEGDN 180

Query: 181 AHAPNMAGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDR 240
           AHAPNM GKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDR
Sbjct: 181 AHAPNMGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDR 240

Query: 241 VVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMN-------MEHMPPP-HQSWGPP 300
           VVEVLGDP  VHKAVELIASHLRKFLVDRSIIPVFEMN       MEHMPPP HQ WGPP
Sbjct: 241 VVEVLGDPTSVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNPQMEHMPPPQHQPWGPP 300

Query: 301 QGMPPNAGGGPGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHT 360
           QG+PPNAGGGPGFGPNPQYMPPPRQFD+YYPPADMPSVMDKQPHHGISAYGREAPMGVH 
Sbjct: 301 QGIPPNAGGGPGFGPNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHA 360

Query: 361 SSNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT 420
           +SNAQS PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT
Sbjct: 361 ASNAQSVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT 420

Query: 421 VEMSGTASQVQAAQQLIQAIIFSEASKHPCLIVLQNFMAGAGAPAQTQAGGSTDQGYNSY 480
           VEMSGTASQVQAAQQLI                 QNFMAGAGA AQ QAGGSTDQGYNSY
Sbjct: 421 VEMSGTASQVQAAQQLI-----------------QNFMAGAGASAQAQAGGSTDQGYNSY 480

Query: 481 AAHGSVYASPPANPAHASHA-GGYGSVYGTNYGY 505
           A HGSVYASPPAN AHASHA GGYGSVYGTNYGY
Sbjct: 481 AGHGSVYASPPANQAHASHAGGGYGSVYGTNYGY 483

[Close]

BLAST of Spg003817 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 1.1e-148
Identity = 319/524 (60.88%), Postives = 361/524 (68.89%), Query Frame = 0


Query: 5   DQNYTHVDDNQVDE---SAQIYENAQVQDTTLEQENIQ-----EPENLHEIEN-----EH 64
           DQ    V D+  D+     Q  E  Q+QD   +Q   Q     +  N  E+++     E 
Sbjct: 95  DQANEDVQDHSQDDLQYQPQNQEQFQLQDEAHDQAQYQAQGDVQDHNGDEVQDKVEDEEG 154

Query: 65  VPETLESEPKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVE 124
           +PE LES  K    ED      EK+WPGWPGE+VFRMLVPAQKVGSIIGRKG+ IKKIVE
Sbjct: 155 IPEHLESLQKSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVE 214

Query: 125 ETRARIKILDGPPGTAERAASGTFVPRSTAISLVMVSAKEEPDSAFPPAVDGLLRVHKRI 184
           ETRARIKILDGPPGT ERA              VMVS KEEP+S+ PP++DGLLRVH RI
Sbjct: 215 ETRARIKILDGPPGTTERA--------------VMVSGKEEPESSLPPSMDGLLRVHMRI 274

Query: 185 VDGLEGDNAHAPNMAGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLP 244
           VDGL+G+ + AP    KVSTRLLV ASQAGSLIGKQGGTVK+IQE S CIVRVLG+EDLP
Sbjct: 275 VDGLDGEASQAP-PPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLP 334

Query: 245 VFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFE-------MNMEHMPPP 304
           VFALQDDRVVEV+G+P  VH+A+ELIASHLRKFLVDRSIIP FE         M+HMPPP
Sbjct: 335 VFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQMDHMPPP 394

Query: 305 HQSWGPPQGMPPNAGGGPGFGPN-PQYMPPPRQFDNYYPPADM-PSVMDKQPHHGISAYG 364
           HQSWGPPQG  P+ GGG G+G N P YM PP + D+YYPP +M    M+KQPH GISAYG
Sbjct: 395 HQSWGPPQGHAPSVGGG-GYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYG 454

Query: 365 REAPMGVHTSSNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQE 424
           RE PM VH SS   + P +  Q TQQMQIPLS+ADAVIGT+G++ISY RR SGATVTIQE
Sbjct: 455 REPPMNVHVSS---APPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQE 514

Query: 425 TRGVPGEMTVEMSGTASQVQAAQQLIQAIIFSEASKHPCLIVLQNFM--AGAGAPAQTQA 484
           TRGVPGEMTVE+SGT SQVQ A QLI                 QNFM  AGA APAQ Q 
Sbjct: 515 TRGVPGEMTVEVSGTGSQVQTAVQLI-----------------QNFMAEAGAPAPAQPQT 574

Query: 485 GGSTDQGYNSYAAHGSVYASPPANPAHASHAGGYGSVYGTNYGY 505
                QGYN YA HGSVYA+ P NP      GGY + Y + YGY
Sbjct: 575 VAPEQQGYNPYATHGSVYAAAPTNP-----PGGYATDYSSGYGY 577

[Close]

BLAST of Spg003817 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 7.0e-63
Identity = 172/433 (39.72%), Postives = 243/433 (56.12%), Query Frame = 0


Query: 26  AQVQDTTLEQENIQEPENLHEIENEHVPETLESEPK----QVHNEDPLAVV--------- 85
           A V D+     +I  PEN + I        L  E      +++  D LA           
Sbjct: 2   AAVADSVENNGSINLPENENLIPAGFSAAALLDENSGAFPELNQPDSLAAAETTFPDTND 61

Query: 86  -GEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAA 145
             E++WPGWPG+ VFRM+VP  KVG+IIGRKG+FIKK+ EETRARIK+LDGP  T +R  
Sbjct: 62  SAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDR-- 121

Query: 146 SGTFVPRSTAISLVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMAGKV-- 205
                       +V++S KEEP++   PA+D +LRV +R V GL  ++      AG V  
Sbjct: 122 ------------IVLISGKEEPEAYMSPAMDAVLRVFRR-VSGLPDNDDDDVQNAGSVFS 181

Query: 206 STRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPAG 265
           S RLLVA++QA +LIGKQG  +KSI E S   VR+L  E+ P +A QD+R+V++ G+   
Sbjct: 182 SVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALK 241

Query: 266 VHKAVELIASHLRKFLVDRSIIPVFE-------MNMEHMPPPHQSWGPPQGMPPNAGGGP 325
           + KA+E I  HLR+FLVD +++P+FE              P  +S      +  N    P
Sbjct: 242 ILKALEAIVGHLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL-MEP 301

Query: 326 GFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGV-HTSSNAQSAPSI 385
            F    +  P   + D+       PS        G+S Y ++  +   H+   A+ + + 
Sbjct: 302 DFSLLARREPLFLERDSRVDSRVQPS--------GVSIYSQDPVLSARHSPGLARVSSAF 361

Query: 386 VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQV 435
           VTQ +Q MQIP S+A+ +IG  GA+I+YIRR SGAT+TI+E+   P ++TVE+ GT SQV
Sbjct: 362 VTQVSQTMQIPFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQV 409

[Close]

BLAST of Spg003817 vs. ExPASy Swiss-Prot
Match: Q5E9A3 (Poly(rC)-binding protein 1 OS=Bos taurus OX=9913 GN=PCBP1 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 3.5e-14
Identity = 100/366 (27.32%), Postives = 158/366 (43.17%), Query Frame = 0


Query: 87  RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAASGTFVPRSTAISLVM 146
           R+L+  ++VGSIIG+KGE +K+I EE+ ARI I +G     ER  + T            
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLT------------ 76

Query: 147 VSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGD-NAHAPNMAG----KVSTRLLVAASQAG 206
                          + + +    I+D LE D N+   N        V+ RL+V A+Q G
Sbjct: 77  ------------GPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCG 136

Query: 207 SLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHL 266
           SLIGK G  +K I+E +   V+V G     +     +R + + G P  V + V+ I   +
Sbjct: 137 SLIGKGGCKIKEIRESTGAQVQVAG----DMLPNSTERAITIAGVPQSVTECVKQICLVM 196

Query: 267 RKFLVDRSIIPVFEMNMEHMPPPHQSWGPPQGMPPNAGGGPGFGPNPQYMPPPR------ 326
            + L       V  M + + P P  S     G         G+      +  P       
Sbjct: 197 LETLSQSPQGRV--MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSI 256

Query: 327 QFDNYYPPADMPSV--MDKQPHHGISAYGREAPMGVHTSS----NAQSAPSIVTQTTQQM 386
           Q  +   P D+  +  + +Q  H    +G     G+ +SS       ++    TQTT ++
Sbjct: 257 QGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHEL 316

Query: 387 QIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQ 436
            IP +    +IG  GA+I+ IR+ SGA + I           V ++G+A+ +  AQ LI 
Sbjct: 317 TIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLIN 350

[Close]

BLAST of Spg003817 vs. ExPASy Swiss-Prot
Match: Q15365 (Poly(rC)-binding protein 1 OS=Homo sapiens OX=9606 GN=PCBP1 PE=1 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 3.5e-14
Identity = 100/366 (27.32%), Postives = 158/366 (43.17%), Query Frame = 0


Query: 87  RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAASGTFVPRSTAISLVM 146
           R+L+  ++VGSIIG+KGE +K+I EE+ ARI I +G     ER  + T            
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLT------------ 76

Query: 147 VSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGD-NAHAPNMAG----KVSTRLLVAASQAG 206
                          + + +    I+D LE D N+   N        V+ RL+V A+Q G
Sbjct: 77  ------------GPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCG 136

Query: 207 SLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHL 266
           SLIGK G  +K I+E +   V+V G     +     +R + + G P  V + V+ I   +
Sbjct: 137 SLIGKGGCKIKEIRESTGAQVQVAG----DMLPNSTERAITIAGVPQSVTECVKQICLVM 196

Query: 267 RKFLVDRSIIPVFEMNMEHMPPPHQSWGPPQGMPPNAGGGPGFGPNPQYMPPPR------ 326
            + L       V  M + + P P  S     G         G+      +  P       
Sbjct: 197 LETLSQSPQGRV--MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSI 256

Query: 327 QFDNYYPPADMPSV--MDKQPHHGISAYGREAPMGVHTSS----NAQSAPSIVTQTTQQM 386
           Q  +   P D+  +  + +Q  H    +G     G+ +SS       ++    TQTT ++
Sbjct: 257 QGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHEL 316

Query: 387 QIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQ 436
            IP +    +IG  GA+I+ IR+ SGA + I           V ++G+A+ +  AQ LI 
Sbjct: 317 TIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLIN 350

[Close]

BLAST of Spg003817 vs. ExPASy Swiss-Prot
Match: P60335 (Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 3.5e-14
Identity = 100/366 (27.32%), Postives = 158/366 (43.17%), Query Frame = 0


Query: 87  RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAASGTFVPRSTAISLVM 146
           R+L+  ++VGSIIG+KGE +K+I EE+ ARI I +G     ER  + T            
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLT------------ 76

Query: 147 VSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGD-NAHAPNMAG----KVSTRLLVAASQAG 206
                          + + +    I+D LE D N+   N        V+ RL+V A+Q G
Sbjct: 77  ------------GPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCG 136

Query: 207 SLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHL 266
           SLIGK G  +K I+E +   V+V G     +     +R + + G P  V + V+ I   +
Sbjct: 137 SLIGKGGCKIKEIRESTGAQVQVAG----DMLPNSTERAITIAGVPQSVTECVKQICLVM 196

Query: 267 RKFLVDRSIIPVFEMNMEHMPPPHQSWGPPQGMPPNAGGGPGFGPNPQYMPPPR------ 326
            + L       V  M + + P P  S     G         G+      +  P       
Sbjct: 197 LETLSQSPQGRV--MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSI 256

Query: 327 QFDNYYPPADMPSV--MDKQPHHGISAYGREAPMGVHTSS----NAQSAPSIVTQTTQQM 386
           Q  +   P D+  +  + +Q  H    +G     G+ +SS       ++    TQTT ++
Sbjct: 257 QGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHEL 316

Query: 387 QIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQ 436
            IP +    +IG  GA+I+ IR+ SGA + I           V ++G+A+ +  AQ LI 
Sbjct: 317 TIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLIN 350

[Close]

BLAST of Spg003817 vs. ExPASy TrEMBL
Match: A0A6J1CPP3 (flowering locus K homology domain OS=Momordica charantia OX=3673 GN=LOC111013036 PE=4 SV=1)

HSP 1 Score: 841.6 bits (2173), Expect = 1.7e-240
Identity = 449/513 (87.52%), Postives = 458/513 (89.28%), Query Frame = 0


Query: 1   MADVDQNYTHVDDNQVDESAQIYENAQVQDTTLEQENIQEPENLHEIENEHVPETLESEP 60
           MADVDQNYTHV+DNQVDE+ QIYENAQ QD TLEQ+N QEPE LHE+ENEHV ETLE E 
Sbjct: 1   MADVDQNYTHVEDNQVDENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQETLEPEQ 60

Query: 61  KQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 120
           KQVHNED LAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL
Sbjct: 61  KQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 120

Query: 121 DGPPGTAERAASGTFVPRSTAISLVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNA 180
           DGPPGTAERA              VMVSAKEEPDS FPPAVDGLLRVHKRIVDGLEGDNA
Sbjct: 121 DGPPGTAERA--------------VMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNA 180

Query: 181 HAPNMAGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRV 240
           HAP+M GKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLG+EDLPVFALQDDRV
Sbjct: 181 HAPSMGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRV 240

Query: 241 VEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMN-------MEHMPPPHQSWGPPQG 300
           VEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMN       M+HMPPPHQSWGPPQG
Sbjct: 241 VEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPPHQSWGPPQG 300

Query: 301 MPPNAGGGPGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHTSS 360
           MPPNAGGGPGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVH SS
Sbjct: 301 MPPNAGGGPGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASS 360

Query: 361 NAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVE 420
           NAQ+APSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVE
Sbjct: 361 NAQAAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVE 420

Query: 421 MSGTASQVQAAQQLIQAIIFSEASKHPCLIVLQNFMAGAGAPAQTQAGGSTDQGYNSY-A 480
           MSGTASQVQAAQQLI                 QNFMAGAGAPAQ QAG +TDQGYNSY A
Sbjct: 421 MSGTASQVQAAQQLI-----------------QNFMAGAGAPAQAQAGATTDQGYNSYAA 480

Query: 481 AHGSVYASPPANP-AHASHAGGYGSVYGTNYGY 505
           AHGSVYASPPANP AHA HAGGYGSVYGTNYGY
Sbjct: 481 AHGSVYASPPANPAAHAGHAGGYGSVYGTNYGY 482

[Close]

BLAST of Spg003817 vs. ExPASy TrEMBL
Match: A0A6J1G2W6 (flowering locus K homology domain-like OS=Cucurbita moschata OX=3662 GN=LOC111450297 PE=4 SV=1)

HSP 1 Score: 835.5 bits (2157), Expect = 1.2e-238
Identity = 446/514 (86.77%), Postives = 457/514 (88.91%), Query Frame = 0


Query: 1   MADVDQNYTHVDDNQVDESAQIYENAQVQDTTLEQENIQEPENLHEIENEHVPETLES-E 60
           MADVDQ+Y HVDD++VDE+ QIYEN QVQDTTLEQ+N QEPENLHE++NEH+P TLES E
Sbjct: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 60

Query: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAASGTFVPRSTAISLVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDN 180
           LDGPPGTAERA              VMVSAKEEPDSAFPPAVDGLLRVH RIVDGLEGDN
Sbjct: 121 LDGPPGTAERA--------------VMVSAKEEPDSAFPPAVDGLLRVHNRIVDGLEGDN 180

Query: 181 AHAPNMAGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDR 240
           AHAPNM GKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDR
Sbjct: 181 AHAPNMGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDR 240

Query: 241 VVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMN-------MEHMPPP-HQSWGPP 300
           VVEVLGDP  VHKAVELIASHLRKFLVDRSIIPVFEMN       MEHMPPP HQ WGPP
Sbjct: 241 VVEVLGDPTSVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNPQMEHMPPPQHQPWGPP 300

Query: 301 QGMPPNAGGGPGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHT 360
           QG+PPNAGGGPGFGPNPQYMPPPRQFD+YYPPADMPSVMDKQPHHGISAYGREAPMGVH 
Sbjct: 301 QGIPPNAGGGPGFGPNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHA 360

Query: 361 SSNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT 420
           +SNAQS PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT
Sbjct: 361 ASNAQSVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT 420

Query: 421 VEMSGTASQVQAAQQLIQAIIFSEASKHPCLIVLQNFMAGAGAPAQTQAGGSTDQGYNSY 480
           VEMSGTASQVQAAQQLI                 QNFMAGAGA AQ QAGGSTDQGYNSY
Sbjct: 421 VEMSGTASQVQAAQQLI-----------------QNFMAGAGASAQAQAGGSTDQGYNSY 480

Query: 481 AAHGSVYASPPANPAHASHA-GGYGSVYGTNYGY 505
           A HGSVYASPPAN AHASHA GGYGSVYGTNYGY
Sbjct: 481 AGHGSVYASPPANQAHASHAGGGYGSVYGTNYGY 483

[Close]

BLAST of Spg003817 vs. ExPASy TrEMBL
Match: A0A6J1FHB5 (flowering locus K homology domain-like OS=Cucurbita moschata OX=3662 GN=LOC111444152 PE=4 SV=1)

HSP 1 Score: 833.6 bits (2152), Expect = 4.5e-238
Identity = 446/518 (86.10%), Postives = 458/518 (88.42%), Query Frame = 0


Query: 1   MADVDQNYTHVDDNQVD------ESAQIYENAQVQDTTLEQENIQEPENLHEIENEHVPE 60
           MADV+Q+YTHVDDN+VD      E+AQIYENAQVQD TLEQE+ +EPENLH +ENE+ PE
Sbjct: 1   MADVEQSYTHVDDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENENGPE 60

Query: 61  TLESEPKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 120
           TLE EPK+VHNED LAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR
Sbjct: 61  TLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 120

Query: 121 ARIKILDGPPGTAERAASGTFVPRSTAISLVMVSAKEEPDSAFPPAVDGLLRVHKRIVDG 180
           ARIKILDGPPGTAERA              VMVSAKEEPDS FPPAVDGLLRVHKRIVDG
Sbjct: 121 ARIKILDGPPGTAERA--------------VMVSAKEEPDSDFPPAVDGLLRVHKRIVDG 180

Query: 181 LEGDNAHAPNMAGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFA 240
           LEGDNA+APNM GKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLG+EDLPVFA
Sbjct: 181 LEGDNANAPNMGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFA 240

Query: 241 LQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMN-------MEHMPPPHQS 300
           LQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMN       MEHMPPPHQS
Sbjct: 241 LQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQMEHMPPPHQS 300

Query: 301 WGPPQGMPPNAGGGPGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPM 360
           WGPPQGMPPNAGGGPGFGPNP YMPPPRQFDNYYPPADMPS MDKQPHHGISAYGREAPM
Sbjct: 301 WGPPQGMPPNAGGGPGFGPNPPYMPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPM 360

Query: 361 GVHTSSNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVP 420
           GVH  +NAQS PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVP
Sbjct: 361 GVHPQTNAQSVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVP 420

Query: 421 GEMTVEMSGTASQVQAAQQLIQAIIFSEASKHPCLIVLQNFMAGAGAPAQTQAGGSTDQG 480
           GEMTVEMSGTASQVQAAQQLI                 QNFMAGAGAPAQTQAGGS DQG
Sbjct: 421 GEMTVEMSGTASQVQAAQQLI-----------------QNFMAGAGAPAQTQAGGSADQG 480

Query: 481 YNSYAAHGSVYASPP-ANPAHASHAGGYGSVYGTNYGY 505
           YNSYAAHGSVYASPP ANPAHASHAGGYGSVY TNYGY
Sbjct: 481 YNSYAAHGSVYASPPAANPAHASHAGGYGSVYSTNYGY 487

[Close]

BLAST of Spg003817 vs. ExPASy TrEMBL
Match: A0A6J1KG23 (flowering locus K homology domain-like OS=Cucurbita maxima OX=3661 GN=LOC111493565 PE=4 SV=1)

HSP 1 Score: 830.9 bits (2145), Expect = 2.9e-237
Identity = 444/514 (86.38%), Postives = 455/514 (88.52%), Query Frame = 0


Query: 1   MADVDQNYTHVDDNQVDESAQIYENAQVQDTTLEQENIQEPENLHEIENEHVPETLES-E 60
           MADVDQ+Y HVDD++VDE+ QIYEN QVQDTTLEQ+N QEPENLHE++NEH+P T  S E
Sbjct: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATSGSDE 60

Query: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAASGTFVPRSTAISLVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDN 180
           LDGPPGTAERA              VMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDN
Sbjct: 121 LDGPPGTAERA--------------VMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDN 180

Query: 181 AHAPNMAGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDR 240
           AHAPNM GKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDR
Sbjct: 181 AHAPNMGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDR 240

Query: 241 VVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMN-------MEHMPPP-HQSWGPP 300
           VVEVLGDP  VHKAVELIASHLRKFLVDRSIIPVFEMN       MEHMPPP HQ WGPP
Sbjct: 241 VVEVLGDPTSVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNPQMEHMPPPQHQPWGPP 300

Query: 301 QGMPPNAGGGPGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHT 360
           QG+PPNAGGGPGFGPNPQYMPPPRQFD+YYPPADMPSVMDKQPHHGISAYGREAPMGVH 
Sbjct: 301 QGIPPNAGGGPGFGPNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHA 360

Query: 361 SSNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT 420
           +SNAQS PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT
Sbjct: 361 ASNAQSVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT 420

Query: 421 VEMSGTASQVQAAQQLIQAIIFSEASKHPCLIVLQNFMAGAGAPAQTQAGGSTDQGYNSY 480
           VEMSGTASQVQAAQQLI                 QNFMAGAGA AQ QAGGSTDQGYNSY
Sbjct: 421 VEMSGTASQVQAAQQLI-----------------QNFMAGAGASAQAQAGGSTDQGYNSY 480

Query: 481 AAHGSVYASPPANPAHASHAGG-YGSVYGTNYGY 505
           A HGSVYASPPAN AHASH GG YGSVYGTNYGY
Sbjct: 481 AGHGSVYASPPANQAHASHVGGDYGSVYGTNYGY 483

[Close]

BLAST of Spg003817 vs. ExPASy TrEMBL
Match: A0A6J1HPQ7 (flowering locus K homology domain-like OS=Cucurbita maxima OX=3661 GN=LOC111465516 PE=4 SV=1)

HSP 1 Score: 825.1 bits (2130), Expect = 1.6e-235
Identity = 443/518 (85.52%), Postives = 454/518 (87.64%), Query Frame = 0


Query: 1   MADVDQNYTHVDDNQVD------ESAQIYENAQVQDTTLEQENIQEPENLHEIENEHVPE 60
           MADV+Q+YTHVDDN+VD      E+AQIYENAQVQD TLEQE+ +EPENLH +ENEHVPE
Sbjct: 1   MADVEQSYTHVDDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENEHVPE 60

Query: 61  TLESEPKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 120
           TLE EPK+VHNED LAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR
Sbjct: 61  TLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETR 120

Query: 121 ARIKILDGPPGTAERAASGTFVPRSTAISLVMVSAKEEPDSAFPPAVDGLLRVHKRIVDG 180
           ARIKILDGPPGTAERA              VMVSAKEEPDS FPPAVDGLLRVHKRIVDG
Sbjct: 121 ARIKILDGPPGTAERA--------------VMVSAKEEPDSDFPPAVDGLLRVHKRIVDG 180

Query: 181 LEGDNAHAPNMAGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFA 240
           LEGDNA+APNM GKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLG+EDLPVFA
Sbjct: 181 LEGDNANAPNMGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFA 240

Query: 241 LQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMN-------MEHMPPPHQS 300
           LQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMN       MEHMPPPHQS
Sbjct: 241 LQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQMEHMPPPHQS 300

Query: 301 WGPPQGMPPNAGGGPGFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPM 360
           WGPPQGMPPNAGGGPGFGPNP YMPPPRQFDNYYPPADMPS MDKQPHHGISAYGREAPM
Sbjct: 301 WGPPQGMPPNAGGGPGFGPNPPYMPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPM 360

Query: 361 GVHTSSNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVP 420
           GVH  +NAQS PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVP
Sbjct: 361 GVHPQTNAQSVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVP 420

Query: 421 GEMTVEMSGTASQVQAAQQLIQAIIFSEASKHPCLIVLQNFMAGAGAPAQTQAGGSTDQG 480
           GEMTVEMSGTASQVQAAQQLI                 QNFMAGAGAPAQ QAGGS DQG
Sbjct: 421 GEMTVEMSGTASQVQAAQQLI-----------------QNFMAGAGAPAQAQAGGSADQG 480

Query: 481 YNSYAAHGSVYASPP-ANPAHASHAGGYGSVYGTNYGY 505
           YNSY   GSVYASPP ANP HASHAGGYGSVY TNYGY
Sbjct: 481 YNSY-TQGSVYASPPAANPGHASHAGGYGSVYSTNYGY 486

[Close]

BLAST of Spg003817 vs. TAIR 10
Match: AT3G04610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 528.1 bits (1359), Expect = 7.8e-150
Identity = 319/524 (60.88%), Postives = 361/524 (68.89%), Query Frame = 0


Query: 5   DQNYTHVDDNQVDE---SAQIYENAQVQDTTLEQENIQ-----EPENLHEIEN-----EH 64
           DQ    V D+  D+     Q  E  Q+QD   +Q   Q     +  N  E+++     E 
Sbjct: 95  DQANEDVQDHSQDDLQYQPQNQEQFQLQDEAHDQAQYQAQGDVQDHNGDEVQDKVEDEEG 154

Query: 65  VPETLESEPKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVE 124
           +PE LES  K    ED      EK+WPGWPGE+VFRMLVPAQKVGSIIGRKG+ IKKIVE
Sbjct: 155 IPEHLESLQKSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVE 214

Query: 125 ETRARIKILDGPPGTAERAASGTFVPRSTAISLVMVSAKEEPDSAFPPAVDGLLRVHKRI 184
           ETRARIKILDGPPGT ERA              VMVS KEEP+S+ PP++DGLLRVH RI
Sbjct: 215 ETRARIKILDGPPGTTERA--------------VMVSGKEEPESSLPPSMDGLLRVHMRI 274

Query: 185 VDGLEGDNAHAPNMAGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLP 244
           VDGL+G+ + AP    KVSTRLLV ASQAGSLIGKQGGTVK+IQE S CIVRVLG+EDLP
Sbjct: 275 VDGLDGEASQAP-PPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLP 334

Query: 245 VFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFE-------MNMEHMPPP 304
           VFALQDDRVVEV+G+P  VH+A+ELIASHLRKFLVDRSIIP FE         M+HMPPP
Sbjct: 335 VFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQMDHMPPP 394

Query: 305 HQSWGPPQGMPPNAGGGPGFGPN-PQYMPPPRQFDNYYPPADM-PSVMDKQPHHGISAYG 364
           HQSWGPPQG  P+ GGG G+G N P YM PP + D+YYPP +M    M+KQPH GISAYG
Sbjct: 395 HQSWGPPQGHAPSVGGG-GYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYG 454

Query: 365 REAPMGVHTSSNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQE 424
           RE PM VH SS   + P +  Q TQQMQIPLS+ADAVIGT+G++ISY RR SGATVTIQE
Sbjct: 455 REPPMNVHVSS---APPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQE 514

Query: 425 TRGVPGEMTVEMSGTASQVQAAQQLIQAIIFSEASKHPCLIVLQNFM--AGAGAPAQTQA 484
           TRGVPGEMTVE+SGT SQVQ A QLI                 QNFM  AGA APAQ Q 
Sbjct: 515 TRGVPGEMTVEVSGTGSQVQTAVQLI-----------------QNFMAEAGAPAPAQPQT 574

Query: 485 GGSTDQGYNSYAAHGSVYASPPANPAHASHAGGYGSVYGTNYGY 505
                QGYN YA HGSVYA+ P NP      GGY + Y + YGY
Sbjct: 575 VAPEQQGYNPYATHGSVYAAAPTNP-----PGGYATDYSSGYGY 577

[Close]

BLAST of Spg003817 vs. TAIR 10
Match: AT4G26000.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 243.0 bits (619), Expect = 5.0e-64
Identity = 172/433 (39.72%), Postives = 243/433 (56.12%), Query Frame = 0


Query: 26  AQVQDTTLEQENIQEPENLHEIENEHVPETLESEPK----QVHNEDPLAVV--------- 85
           A V D+     +I  PEN + I        L  E      +++  D LA           
Sbjct: 2   AAVADSVENNGSINLPENENLIPAGFSAAALLDENSGAFPELNQPDSLAAAETTFPDTND 61

Query: 86  -GEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAA 145
             E++WPGWPG+ VFRM+VP  KVG+IIGRKG+FIKK+ EETRARIK+LDGP  T +R  
Sbjct: 62  SAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDR-- 121

Query: 146 SGTFVPRSTAISLVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMAGKV-- 205
                       +V++S KEEP++   PA+D +LRV +R V GL  ++      AG V  
Sbjct: 122 ------------IVLISGKEEPEAYMSPAMDAVLRVFRR-VSGLPDNDDDDVQNAGSVFS 181

Query: 206 STRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPAG 265
           S RLLVA++QA +LIGKQG  +KSI E S   VR+L  E+ P +A QD+R+V++ G+   
Sbjct: 182 SVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALK 241

Query: 266 VHKAVELIASHLRKFLVDRSIIPVFE-------MNMEHMPPPHQSWGPPQGMPPNAGGGP 325
           + KA+E I  HLR+FLVD +++P+FE              P  +S      +  N    P
Sbjct: 242 ILKALEAIVGHLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL-MEP 301

Query: 326 GFGPNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGV-HTSSNAQSAPSI 385
            F    +  P   + D+       PS        G+S Y ++  +   H+   A+ + + 
Sbjct: 302 DFSLLARREPLFLERDSRVDSRVQPS--------GVSIYSQDPVLSARHSPGLARVSSAF 361

Query: 386 VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQV 435
           VTQ +Q MQIP S+A+ +IG  GA+I+YIRR SGAT+TI+E+   P ++TVE+ GT SQV
Sbjct: 362 VTQVSQTMQIPFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQV 409

[Close]

BLAST of Spg003817 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 95.5 bits (236), Expect = 1.3e-19
Identity = 85/350 (24.29%), Postives = 160/350 (45.71%), Query Frame = 0


Query: 83  ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAASGTFVPRSTAI 142
           ++VFR L P +K+GS+IGR G+ +K++  +TR++I+I +  PG  ER  +  + P     
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVIT-IYSPSDE-- 108

Query: 143 SLVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMAGKVSTRLLVAASQAGS 202
                +A  + +    PA D L R+H R+V   +  +  +P    +V+ +LLV + Q G 
Sbjct: 109 ----TNAFGDGEKVLSPAQDALFRIHDRVVAD-DARSEDSPEGEKQVTAKLLVPSDQIGC 168

Query: 203 LIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLR 262
           ++G+ G  V++I+ E+   +R++   ++P+ AL  D ++++ G+   V KA+  IAS L 
Sbjct: 169 ILGRGGQIVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRL- 228

Query: 263 KFLVDRSIIPVFEMNMEHMPPPHQSWGPPQGMPPNAGGGPGFGPNPQYMPPPRQFDNYYP 322
                                 H++    Q +  ++GG P                +   
Sbjct: 229 ----------------------HENPSRSQNLLSSSGGYPA--------------GSLMS 288

Query: 323 PADMPSVMDKQPHHGISAYGREAPMGVHTSSNAQSAPSIVTQTTQQMQIPLSFADAVIGT 382
            A  P ++   P  G  +YGR+A                 T+   ++  P+    +VIG 
Sbjct: 289 HAGGPRLVGLAPLMG--SYGRDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGK 348

Query: 383 AGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQAII 433
            GA I+ +R+ + AT+ +  +R    +  + +S       A    I+A++
Sbjct: 349 GGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVM 351

[Close]

BLAST of Spg003817 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 95.5 bits (236), Expect = 1.3e-19
Identity = 85/350 (24.29%), Postives = 160/350 (45.71%), Query Frame = 0


Query: 83  ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAASGTFVPRSTAI 142
           ++VFR L P +K+GS+IGR G+ +K++  +TR++I+I +  PG  ER  +  + P     
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVIT-IYSPSDE-- 108

Query: 143 SLVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMAGKVSTRLLVAASQAGS 202
                +A  + +    PA D L R+H R+V   +  +  +P    +V+ +LLV + Q G 
Sbjct: 109 ----TNAFGDGEKVLSPAQDALFRIHDRVVAD-DARSEDSPEGEKQVTAKLLVPSDQIGC 168

Query: 203 LIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLR 262
           ++G+ G  V++I+ E+   +R++   ++P+ AL  D ++++ G+   V KA+  IAS L 
Sbjct: 169 ILGRGGQIVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRL- 228

Query: 263 KFLVDRSIIPVFEMNMEHMPPPHQSWGPPQGMPPNAGGGPGFGPNPQYMPPPRQFDNYYP 322
                                 H++    Q +  ++GG P                +   
Sbjct: 229 ----------------------HENPSRSQNLLSSSGGYPA--------------GSLMS 288

Query: 323 PADMPSVMDKQPHHGISAYGREAPMGVHTSSNAQSAPSIVTQTTQQMQIPLSFADAVIGT 382
            A  P ++   P  G  +YGR+A                 T+   ++  P+    +VIG 
Sbjct: 289 HAGGPRLVGLAPLMG--SYGRDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGK 348

Query: 383 AGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQAII 433
            GA I+ +R+ + AT+ +  +R    +  + +S       A    I+A++
Sbjct: 349 GGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVM 351

[Close]

BLAST of Spg003817 vs. TAIR 10
Match: AT5G64390.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 77.0 bits (188), Expect = 4.7e-14
Identity = 104/449 (23.16%), Postives = 171/449 (38.08%), Query Frame = 0


Query: 51  HVPETLESEPKQVHNEDPLAVVGEKKWPGWPGE-------SVFRMLVPAQKVGSIIGRKG 110
           H   TL++ P        +A     K P  P E        VF++L   +  G +IG  G
Sbjct: 414 HRYSTLDTHPHSFTTSASMANTATMKPP--PSEVEVGNQDVVFKILCSTENAGGVIGTGG 473

Query: 111 EFIKKIVEETRARIKILDGPPGTAERAASGTFVPRSTAISLVMVSAKEEPDSAFPPAVDG 170
           + ++ +  ET A I + +      ER              L+ V+A E P+    PA   
Sbjct: 474 KVVRMLHSETGAFINVGNTLDDCEER--------------LIAVTASENPECQSSPAQKA 533

Query: 171 LLRVHKRIVDGLEGDNAHAPNMAGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVR 230
           ++ +  R+ + L  +          ++ RL+V  SQ G ++GK G  V  +++ +   ++
Sbjct: 534 IMLIFSRLFE-LATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQ 593

Query: 231 VLGTEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMNMEHMPP 290
           +L  E  P    ++D+VV++ G+   V +A+  I S LR  +   S+      +   +  
Sbjct: 594 ILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKSSSALTT 653

Query: 291 ---------------PHQSWGPP----------------QGMPPNAGGGPGFGPNPQYMP 350
                           HQS   P                 G   +       G +P   P
Sbjct: 654 ERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNYSRSVGTDPYIRP 713

Query: 351 PPRQFDNYYPPADMPS------VMD--KQPHHGISAYGR-------EAPMGVHTSSNAQS 410
                D + P A           MD     HH   A  R        AP G+  +S   S
Sbjct: 714 EDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPPAAPRGLSDASGGLS 773

Query: 411 A------------PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRG 435
           +             +IVT TT ++++P +    V G  G ++  +R+ SGA V I E   
Sbjct: 774 SARAGHVLGSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPL 833

The following BLAST results are available for this feature:

BLAST of Spg003817 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030320.1	4.0e-241	86.34	Flowering locus K-likey domain protein [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_022143057.1	3.4e-240	87.52	flowering locus K homology domain [Momordica charantia] >XP_022143058.1 flowerin...	[more]
XP_023538035.1	2.2e-239	86.49	flowering locus K homology domain-like [Cucurbita pepo subsp. pepo]	[more]
XP_023546728.1	1.9e-238	86.77	flowering locus K homology domain-like [Cucurbita pepo subsp. pepo] >XP_02354672...	[more]
XP_022946120.1	2.4e-238	86.77	flowering locus K homology domain-like [Cucurbita moschata] >XP_022946121.1 flow...	[more]

BLAST of Spg003817 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR13	1.1e-148	60.88	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
Q9SZH4	7.0e-63	39.72	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]
Q5E9A3	3.5e-14	27.32	Poly(rC)-binding protein 1 OS=Bos taurus OX=9913 GN=PCBP1 PE=2 SV=1	[more]
Q15365	3.5e-14	27.32	Poly(rC)-binding protein 1 OS=Homo sapiens OX=9606 GN=PCBP1 PE=1 SV=2	[more]
P60335	3.5e-14	27.32	Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1	[more]

BLAST of Spg003817 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPP3	1.7e-240	87.52	flowering locus K homology domain OS=Momordica charantia OX=3673 GN=LOC111013036...	[more]
A0A6J1G2W6	1.2e-238	86.77	flowering locus K homology domain-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1FHB5	4.5e-238	86.10	flowering locus K homology domain-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1KG23	2.9e-237	86.38	flowering locus K homology domain-like OS=Cucurbita maxima OX=3661 GN=LOC1114935...	[more]
A0A6J1HPQ7	1.6e-235	85.52	flowering locus K homology domain-like OS=Cucurbita maxima OX=3661 GN=LOC1114655...	[more]

BLAST of Spg003817 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04610.1	7.8e-150	60.88	RNA-binding KH domain-containing protein	[more]
AT4G26000.1	5.0e-64	39.72	RNA-binding KH domain-containing protein	[more]
AT5G15270.2	1.3e-19	24.29	RNA-binding KH domain-containing protein	[more]
AT5G15270.1	1.3e-19	24.29	RNA-binding KH domain-containing protein	[more]
AT5G64390.1	4.7e-14	23.16	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 187..262 e-value: 7.0E-14 score: 62.1 coord: 82..176 e-value: 9.4E-7 score: 38.4 coord: 363..433 e-value: 1.2E-8 score: 44.7
None	No IPR available	GENE3D	3.30.310.210		coord: 83..267 e-value: 2.3E-32 score: 113.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR10288:SF259	POLY(RC)-BINDING-LIKE PROTEIN	coord: 24..480
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 24..480
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 188..257 score: 15.556364
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 364..428 score: 14.508204
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 83..119 score: 12.831148
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 85..168 e-value: 1.53074E-15 score: 69.0423
None	No IPR available	CDD	cd00105	KH-I	coord: 366..429 e-value: 4.1474E-12 score: 59.4959
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 190..258 e-value: 2.38791E-19 score: 79.8279
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 351..439 e-value: 2.1E-15 score: 58.2
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 354..435
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 181..272
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 77..131
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 191..258 e-value: 7.8E-15 score: 54.4 coord: 366..429 e-value: 6.1E-11 score: 42.0 coord: 86..125 e-value: 1.4E-10 score: 40.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003817.1	Spg003817.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding