Spg003690 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003690
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	methyl-CpG-binding domain-containing protein 11-like
Location	scaffold4: 47550722 .. 47551645 (-)
RNA-Seq Expression	Spg003690
Synteny	Spg003690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATATTTGGCAGTTTTTTCCCAAGCAAGGTAAATCCCCTAAGAAACATGAAGTCATCTTCACAGCTCCCACAGGGGAGGAGATCAACAACAAAAGGAAGTTGGATCAGTACCTGAAGGCACACCCCGGTGGCCCAGCAGCTGCTGAATTTGATTGGGGCACAGGTGAGACGCCAAGGAGGTCAGCAAGGATAAGTGAAAAGGCTAAAGTGACTCCACCAATCGAAAGTGAGCACCCCAAGAGAAGAAGATCTTCGGTGTCAAAGAAAGATCTTAAGGAAACAGAAGCTGAACCAGAAGTTCTGGAGGAGAAGAAAGAAGTTGACAACCAAGATGCTGGAAAAGATGAGAACATGGCTGATGCTGAGGTAAAAGATGATGATAAGAAGGAAAATCAAGATGAGAAGGAAGCAAAAGATGATGATAAGAAGGAAAATCAAGATGAGAAGGAAGCAAAAGATGAAGCTGCCGAAGCAGAGGCACCAAAACCTGATGAGCAGTTGAATGCAGAAAATGATGCTGAAAAACAAGAACATAAGACAACTAATGAATCAGATCAAGAAAAATTGGAAAGAAATCTCAATGAGAAGGAACCTGAAAGCTCTATACTAAACCTCAATGAGAATCTGGAGGCAGCAAAGCATGAAGAGAACATTGAGCAACCACAAGTTGAGGAGAAGAATGATGGTAATTTGGGTGAAACCGCCAAACCTGAAACTCATGTATCCGATGAAAAAGAAAAGGAACTAGAGGAGAATCAAAATCCTAATCAACAGGATATTGAACTGGAAGGAGAAATCAAGGACAAAGCACAAGCAGCTGCAACTCAAGAAAAGAGTGAGAAGCACTCTGAGACAAACAAGACTATTGAAGTCACTGAGAATGGCAACCACAGGAATGAAGCTGGTGAGGTAAAGCCTTGA

mRNA sequence

ATGAATATTTGGCAGTTTTTTCCCAAGCAAGGTAAATCCCCTAAGAAACATGAAGTCATCTTCACAGCTCCCACAGGGGAGGAGATCAACAACAAAAGGAAGTTGGATCAGTACCTGAAGGCACACCCCGGTGGCCCAGCAGCTGCTGAATTTGATTGGGGCACAGGTGAGACGCCAAGGAGGTCAGCAAGGATAAGTGAAAAGGCTAAAGTGACTCCACCAATCGAAAGTGAGCACCCCAAGAGAAGAAGATCTTCGGTGTCAAAGAAAGATCTTAAGGAAACAGAAGCTGAACCAGAAGTTCTGGAGGAGAAGAAAGAAGTTGACAACCAAGATGCTGGAAAAGATGAGAACATGGCTGATGCTGAGGTAAAAGATGATGATAAGAAGGAAAATCAAGATGAGAAGGAAGCAAAAGATGATGATAAGAAGGAAAATCAAGATGAGAAGGAAGCAAAAGATGAAGCTGCCGAAGCAGAGGCACCAAAACCTGATGAGCAGTTGAATGCAGAAAATGATGCTGAAAAACAAGAACATAAGACAACTAATGAATCAGATCAAGAAAAATTGGAAAGAAATCTCAATGAGAAGGAACCTGAAAGCTCTATACTAAACCTCAATGAGAATCTGGAGGCAGCAAAGCATGAAGAGAACATTGAGCAACCACAAGTTGAGGAGAAGAATGATGGTAATTTGGGTGAAACCGCCAAACCTGAAACTCATGTATCCGATGAAAAAGAAAAGGAACTAGAGGAGAATCAAAATCCTAATCAACAGGATATTGAACTGGAAGGAGAAATCAAGGACAAAGCACAAGCAGCTGCAACTCAAGAAAAGAGTGAGAAGCACTCTGAGACAAACAAGACTATTGAAGTCACTGAGAATGGCAACCACAGGAATGAAGCTGGTGAGGTAAAGCCTTGA

Coding sequence (CDS)

ATGAATATTTGGCAGTTTTTTCCCAAGCAAGGTAAATCCCCTAAGAAACATGAAGTCATCTTCACAGCTCCCACAGGGGAGGAGATCAACAACAAAAGGAAGTTGGATCAGTACCTGAAGGCACACCCCGGTGGCCCAGCAGCTGCTGAATTTGATTGGGGCACAGGTGAGACGCCAAGGAGGTCAGCAAGGATAAGTGAAAAGGCTAAAGTGACTCCACCAATCGAAAGTGAGCACCCCAAGAGAAGAAGATCTTCGGTGTCAAAGAAAGATCTTAAGGAAACAGAAGCTGAACCAGAAGTTCTGGAGGAGAAGAAAGAAGTTGACAACCAAGATGCTGGAAAAGATGAGAACATGGCTGATGCTGAGGTAAAAGATGATGATAAGAAGGAAAATCAAGATGAGAAGGAAGCAAAAGATGATGATAAGAAGGAAAATCAAGATGAGAAGGAAGCAAAAGATGAAGCTGCCGAAGCAGAGGCACCAAAACCTGATGAGCAGTTGAATGCAGAAAATGATGCTGAAAAACAAGAACATAAGACAACTAATGAATCAGATCAAGAAAAATTGGAAAGAAATCTCAATGAGAAGGAACCTGAAAGCTCTATACTAAACCTCAATGAGAATCTGGAGGCAGCAAAGCATGAAGAGAACATTGAGCAACCACAAGTTGAGGAGAAGAATGATGGTAATTTGGGTGAAACCGCCAAACCTGAAACTCATGTATCCGATGAAAAAGAAAAGGAACTAGAGGAGAATCAAAATCCTAATCAACAGGATATTGAACTGGAAGGAGAAATCAAGGACAAAGCACAAGCAGCTGCAACTCAAGAAAAGAGTGAGAAGCACTCTGAGACAAACAAGACTATTGAAGTCACTGAGAATGGCAACCACAGGAATGAAGCTGGTGAGGTAAAGCCTTGA

Protein sequence

MNIWQFFPKQGKSPKKHEVIFTAPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVTPPIESEHPKRRRSSVSKKDLKETEAEPEVLEEKKEVDNQDAGKDENMADAEVKDDDKKENQDEKEAKDDDKKENQDEKEAKDEAAEAEAPKPDEQLNAENDAEKQEHKTTNESDQEKLERNLNEKEPESSILNLNENLEAAKHEENIEQPQVEEKNDGNLGETAKPETHVSDEKEKELEENQNPNQQDIELEGEIKDKAQAAATQEKSEKHSETNKTIEVTENGNHRNEAGEVKP

Homology

[Close]

BLAST of Spg003690 vs. NCBI nr
Match: XP_008457463.1 (PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo] >KAA0063499.1 methyl-CpG-binding domain-containing protein 11-like [Cucumis melo var. makuwa] >TYJ97825.1 methyl-CpG-binding domain-containing protein 11-like [Cucumis melo var. makuwa])

HSP 1 Score: 413.3 bits (1061), Expect = 1.8e-111
Identity = 243/303 (80.20%), Postives = 262/303 (86.47%), Query Frame = 0


Query: 5   QFFPKQGKSPKKHEVIFTAPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQG SP+KHEVIFT PTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGNSPRKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVTPPIESEHPKRRRSSVSKKDLKETEAEPEVLEEKKEVDNQDAGKDENMADAEV 124
           ISEKAK +PP+ESEHPKR+R+SVSKKDLKETEAEPEVLEEKKEVDN DAGKDE+MADAEV
Sbjct: 88  ISEKAKASPPMESEHPKRKRTSVSKKDLKETEAEPEVLEEKKEVDNPDAGKDESMADAEV 147

Query: 125 KDDDKKENQDEKEAKDDDKKENQDEKEAKDEAAEAEAPKPDEQLNAENDAEKQEHKTTNE 184
                         KD +KKEN DEKE K+EAAEAE PKPD+QLNA+N+AEKQEHK TNE
Sbjct: 148 --------------KDANKKENIDEKETKNEAAEAEPPKPDDQLNADNEAEKQEHKITNE 207

Query: 185 SDQEKLERNLNEKEPESSILNLNENLEAAKHEENIEQPQVEEKNDGNLGETAKPETHVSD 244
           S+QEKLE NLNEKEPESS LNLNENLE AKHEE IEQPQV EKNDGN  E  KP+T VSD
Sbjct: 208 SNQEKLEGNLNEKEPESSKLNLNENLEGAKHEEKIEQPQV-EKNDGNFAEAVKPDTLVSD 267

Query: 245 EKEKELEENQNPNQQDIELEGEIKDKAQAAATQEKSEKHSETNKTIEVTENGNHRNEAGE 304
           ++E  L ENQNPNQQ+IELEGEIKDKA AA  +EKSEKH+ETNKTIEVTENGNHRN  GE
Sbjct: 268 KQENAL-ENQNPNQQEIELEGEIKDKAGAA--EEKSEKHTETNKTIEVTENGNHRNGTGE 312

Query: 305 VKP 308
           VKP
Sbjct: 328 VKP 312

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BLAST of Spg003690 vs. NCBI nr
Match: XP_023545855.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 411.8 bits (1057), Expect = 5.3e-111
Identity = 245/322 (76.09%), Postives = 273/322 (84.78%), Query Frame = 0


Query: 5   QFFPKQGKSPKKHEVIFTAPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQG SPKK+EVIF  PTGEE +NKRKLDQYLK+HPGGPA+AEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQYLKSHPGGPASAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVTPPIESEHPKRRRSSVSKKDLKETEAEP-EVLEEKKEVDNQDAGKDENMADAE 124
           ISEKAKV  P+ESEHPKR+R+SVSKK LKE E EP EVLEEKKEVDNQDAGKDE++ADAE
Sbjct: 88  ISEKAKVISPMESEHPKRKRTSVSKKGLKEIETEPAEVLEEKKEVDNQDAGKDESIADAE 147

Query: 125 VKDDDKKENQDE------------------KEAKDDDKKENQDEKEAKDEAAEAEAPKPD 184
           VKDDDK E +DE                   + KD DKKENQDEKE KDEAAEAE PKPD
Sbjct: 148 VKDDDKNETKDEAAEADPPKPDDQLNADNDADIKDADKKENQDEKETKDEAAEAEPPKPD 207

Query: 185 EQLNAENDAEKQEHKTTNESDQEKLERNLNEKEPESSILNLNENLEAAKHEENIEQPQVE 244
           +QLNA+NDAEKQEHK T+ES+QEKLERNLNEKEPESS LNLNENLE AKH+E IEQPQVE
Sbjct: 208 DQLNADNDAEKQEHKITSESEQEKLERNLNEKEPESSKLNLNENLEGAKHDEQIEQPQVE 267

Query: 245 EKNDGNLGETAKPETHVSDEKEKELEENQNPNQQDIELEGEIKDKAQAAATQEKSEKHSE 304
           EKND NLGET KP+T +SD +EKE +ENQ P +QDIELEGEIKDK  AAAT+EK+EKH+E
Sbjct: 268 EKNDSNLGETVKPDTLLSDRQEKE-QENQKPYEQDIELEGEIKDK--AAATEEKNEKHTE 327

Query: 305 TNKTIEVTENGNHRNEAGEVKP 308
           TNK+IE TENG+HRN+AGEVKP
Sbjct: 328 TNKSIEATENGSHRNDAGEVKP 346

[Close]

BLAST of Spg003690 vs. NCBI nr
Match: XP_022143242.1 (methyl-CpG-binding domain-containing protein 11-like [Momordica charantia])

HSP 1 Score: 411.0 bits (1055), Expect = 9.1e-111
Identity = 242/303 (79.87%), Postives = 268/303 (88.45%), Query Frame = 0


Query: 5   QFFPKQGKSPKKHEVIFTAPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQGKSPKK EVIFT PTGEEINNKRKL+QYLKAHPGGPA+AEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGKSPKKQEVIFTTPTGEEINNKRKLEQYLKAHPGGPASAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVTPPIESEHPKRRRSSVSKKDLKETEAEPEVLEEKKEVDNQDAGKDENMADAEV 124
           ISEKAK TPP+ESEHPKR+R+SVS+KDLKETEAEPEVLEE KEV++QDAGK E++ADAEV
Sbjct: 88  ISEKAKATPPMESEHPKRKRTSVSRKDLKETEAEPEVLEEMKEVNDQDAGKYESIADAEV 147

Query: 125 KDDDKKENQDEKEAKDDDKKENQDEKEAKDEAAEAEAPKPDEQLNAENDAEKQEHKTTNE 184
           K+DDK ENQDEKE   + K ENQDE++ KDEAA AEA K D QLNA+N+AE  EHK T E
Sbjct: 148 KNDDKMENQDEKET--EVKDENQDEEKTKDEAAVAEAAKSDNQLNADNNAE--EHKITAE 207

Query: 185 SDQEKLERNLNEKEPESSILNLNENLEAAKHEENIEQPQVEEKNDGNLGETAKPETHVSD 244
           SDQEKLERNLNEKEP+SS LNLNENLE AKHEE IEQPQ+EEKND NLGETAKP+T +SD
Sbjct: 208 SDQEKLERNLNEKEPDSSKLNLNENLEGAKHEEKIEQPQIEEKNDSNLGETAKPDTVISD 267

Query: 245 EKEKELEENQNPNQQDIELEGEIKDKAQAAATQEKSEKHSETNKTIEVTENGNHRNEAGE 304
            KE ELEE Q PNQQDIELEGEI+DK  AAA  E SEKH+ETN+T EVTENGNH+N+AGE
Sbjct: 268 VKESELEEKQKPNQQDIELEGEIEDK--AAAALENSEKHTETNQTKEVTENGNHKNDAGE 324

Query: 305 VKP 308
           VKP
Sbjct: 328 VKP 324

[Close]

BLAST of Spg003690 vs. NCBI nr
Match: XP_004139304.1 (methyl-CpG-binding domain-containing protein 11 [Cucumis sativus] >KAE8651531.1 hypothetical protein Csa_019489 [Cucumis sativus])

HSP 1 Score: 408.3 bits (1048), Expect = 5.9e-110
Identity = 241/303 (79.54%), Postives = 260/303 (85.81%), Query Frame = 0


Query: 5   QFFPKQGKSPKKHEVIFTAPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQG SP+KHEVIFT PTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGNSPRKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVTPPIESEHPKRRRSSVSKKDLKETEAEPEVLEEKKEVDNQDAGKDENMADAEV 124
           ISEKAKV+PP+ESEHPKR+R+SVSKKDLKETEAEPEV+EEKKEVDN DAGKDE+MADAEV
Sbjct: 88  ISEKAKVSPPMESEHPKRKRTSVSKKDLKETEAEPEVMEEKKEVDNPDAGKDESMADAEV 147

Query: 125 KDDDKKENQDEKEAKDDDKKENQDEKEAKDEAAEAEAPKPDEQLNAENDAEKQEHKTTNE 184
                         KD DKKENQDEKE K+EAAEAE PKPD+QLNA N+AEKQEHK TNE
Sbjct: 148 --------------KDADKKENQDEKETKNEAAEAEPPKPDDQLNAGNEAEKQEHKITNE 207

Query: 185 SDQEKLERNLNEKEPESSILNLNENLEAAKHEENIEQPQVEEKNDGNLGETAKPETHVSD 244
           S+QEK E NLNEKEPESS LNLNEN+E AKHEE IE+PQV EKNDGN  E  KP+T VSD
Sbjct: 208 SNQEKSEGNLNEKEPESSKLNLNENVEGAKHEEMIEKPQV-EKNDGNFAEAVKPDTLVSD 267

Query: 245 EKEKELEENQNPNQQDIELEGEIKDKAQAAATQEKSEKHSETNKTIEVTENGNHRNEAGE 304
           ++E  L ENQNPNQQDIELE EIKDKA  A  +EKSEKH+ETNKTIEVTENGNHRN  GE
Sbjct: 268 KQENAL-ENQNPNQQDIELEEEIKDKAGEA--EEKSEKHTETNKTIEVTENGNHRNGTGE 312

Query: 305 VKP 308
           VKP
Sbjct: 328 VKP 312

[Close]

BLAST of Spg003690 vs. NCBI nr
Match: XP_022946072.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita moschata])

HSP 1 Score: 406.4 bits (1043), Expect = 2.2e-109
Identity = 243/322 (75.47%), Postives = 270/322 (83.85%), Query Frame = 0


Query: 5   QFFPKQGKSPKKHEVIFTAPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQG SPKK+EVIF  PTGEE +NKRKLDQYLK+HPGGPA+AEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQYLKSHPGGPASAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVTPPIESEHPKRRRSSVSKKDLKETEAEP-EVLEEKKEVDNQDAGKDENMADAE 124
           ISEKAKV  P+ESEHPKR+R+SVSKK LKE E EP EV EEKKEVDNQDAGKDE +ADAE
Sbjct: 88  ISEKAKVISPMESEHPKRKRTSVSKKGLKEIETEPAEVREEKKEVDNQDAGKDETIADAE 147

Query: 125 VKDDDKKENQDE------------------KEAKDDDKKENQDEKEAKDEAAEAEAPKPD 184
           VKDDDK E +DE                   + KD DKKENQDEKE KDEAAEAE PKPD
Sbjct: 148 VKDDDKNETKDEAAEADPPKPDDQLNADNDADIKDADKKENQDEKETKDEAAEAEPPKPD 207

Query: 185 EQLNAENDAEKQEHKTTNESDQEKLERNLNEKEPESSILNLNENLEAAKHEENIEQPQVE 244
           +QLNA+NDAEKQEHK T+ES+QEKLERNLNEKEPESS LNLNENLE AKH+E IEQPQVE
Sbjct: 208 DQLNADNDAEKQEHKITSESEQEKLERNLNEKEPESSKLNLNENLEGAKHDEKIEQPQVE 267

Query: 245 EKNDGNLGETAKPETHVSDEKEKELEENQNPNQQDIELEGEIKDKAQAAATQEKSEKHSE 304
           EKND  LGET KP+T +SD +EKE +ENQ P +QDIELEGEIKDK  AAAT+EK+EKH+E
Sbjct: 268 EKNDSTLGETVKPDTLLSDRQEKE-QENQKPCEQDIELEGEIKDK--AAATEEKNEKHTE 327

Query: 305 TNKTIEVTENGNHRNEAGEVKP 308
           TNK+IE TENG+HRN+AGEVKP
Sbjct: 328 TNKSIEATENGSHRNDAGEVKP 346

[Close]

BLAST of Spg003690 vs. ExPASy Swiss-Prot
Match: Q9XI36 (Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=MBD10 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.5e-20
Identity = 111/321 (34.58%), Postives = 175/321 (54.52%), Query Frame = 0


Query: 6   FFPKQGKSPKKHEVIFTAPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARI 65
           F+PK+  +P+K E++F APTGEEI+++++L+QYLKAHPG P  +EF+W TGETPRRS+RI
Sbjct: 22  FYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVISEFEWTTGETPRRSSRI 81

Query: 66  SEKAKVTPPIESEHP--KRRRSSVSKKDLKETEAEPEVLEEKKEVDNQDAGKDEN----- 125
           S+K K T P   + P  K+RRSS++KKD KE   + E    K+ +D    GK EN     
Sbjct: 82  SQKVKATTPTPDKEPLLKKRRSSLTKKDNKEAAEKNEEAAVKENMDVDKDGKTENAEAEK 141

Query: 126 ---------MADAEVKDDDKKENQDEKEAKDDDKKENQDEKEAKDEAAEAEAPKPDEQLN 185
                    +A+AE ++++ ++ + EK  K+ +K E    KE + E AEAE  K  E+  
Sbjct: 142 EKEKEGVTEIAEAEKENNEGEKTEAEKVNKEGEKTE--AGKEGQTEIAEAEKEKEGEKAE 201

Query: 186 AEN-DAE-KQEHKTTNESDQEKLERNLNEKE--PESSILNLNENLEAAKHEENIEQPQVE 245
           AEN +AE  ++ K + E D  +LE+     E   E S +   ++ E  + +E + +  VE
Sbjct: 202 AENKEAEVVRDKKESMEVDTSELEKKAGSGEGAEEPSKVEGLKDTEMKEAQEVVTEADVE 261

Query: 246 EKNDGNLGETAKPETHVSDEKEKELEENQNPNQQDIELEGEIKDKAQAAATQEKSEKHSE 305
           +K         K E   S   E   E+N    + +++ + E  DK + +   ++    +E
Sbjct: 262 KK-----PAEEKTENKGSVTTEANGEQNVTLGEPNLDADAE-ADKGKESKEYDEKTTEAE 321

Query: 306 TNKTIEVTENGNHRNEAGEVK 307
            NK  +  E+   + EA   K
Sbjct: 322 ANKENDTQESDEKKTEAAANK 334

[Close]

BLAST of Spg003690 vs. ExPASy Swiss-Prot
Match: Q9LW00 (Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=MBD11 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.6e-17
Identity = 93/235 (39.57%), Postives = 130/235 (55.32%), Query Frame = 0


Query: 6   FFPKQGKSPKKHEVIFTAPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARI 65
           F+P +  S KK EV+F APTGEEI+N+++L+QYLK+HPG PA AEFDW T  TPRRSARI
Sbjct: 22  FYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSGTPRRSARI 81

Query: 66  SEKAKVTPPIESEHPKRR---RSSVSKKDLKETEAEPEVLEEKKEVDNQDAGKDENMADA 125
           SEK K TP  + E PK+R   +S VSKKD +  ++E    EE   V + +    E +A+ 
Sbjct: 82  SEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGG-EENSHVKDTEMNPPEGIAEN 141

Query: 126 EVKDDDKKENQDEKEAKDDDKKENQDEKEAKDEA---AEAEAPKPDEQLNAENDAEKQEH 185
           E   D     + E+    +D KEN   +E  + A    E E+ K ++ L++ +D  K+  
Sbjct: 142 ENVTDKNGSGETERV---NDAKENIVAEETPNAAPVQEEGESMK-EKALDSVDDKSKETD 201

Query: 186 KTTNESDQEKLERNLNEKEPESSILNLNENLEAAKHEENIEQPQVEEKNDGNLGE 235
           K  +    EK   ++ +K  E+S    N   E   HEEN    + E K     GE
Sbjct: 202 KEKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNHEENGLTTEAEGKEKTAEGE 251

[Close]

BLAST of Spg003690 vs. ExPASy TrEMBL
Match: A0A0A0LG01 (MBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G006830 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 7.2e-114
Identity = 246/307 (80.13%), Postives = 264/307 (85.99%), Query Frame = 0


Query: 1   MNIWQFFPKQGKSPKKHEVIFTAPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPR 60
           MNIWQFFPKQG SP+KHEVIFT PTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPR
Sbjct: 1   MNIWQFFPKQGNSPRKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPR 60

Query: 61  RSARISEKAKVTPPIESEHPKRRRSSVSKKDLKETEAEPEVLEEKKEVDNQDAGKDENMA 120
           RSARISEKAKV+PP+ESEHPKR+R+SVSKKDLKETEAEPEV+EEKKEVDN DAGKDE+MA
Sbjct: 61  RSARISEKAKVSPPMESEHPKRKRTSVSKKDLKETEAEPEVMEEKKEVDNPDAGKDESMA 120

Query: 121 DAEVKDDDKKENQDEKEAKDDDKKENQDEKEAKDEAAEAEAPKPDEQLNAENDAEKQEHK 180
           DAEV              KD DKKENQDEKE K+EAAEAE PKPD+QLNA N+AEKQEHK
Sbjct: 121 DAEV--------------KDADKKENQDEKETKNEAAEAEPPKPDDQLNAGNEAEKQEHK 180

Query: 181 TTNESDQEKLERNLNEKEPESSILNLNENLEAAKHEENIEQPQVEEKNDGNLGETAKPET 240
            TNES+QEK E NLNEKEPESS LNLNEN+E AKHEE IE+PQV EKNDGN  E  KP+T
Sbjct: 181 ITNESNQEKSEGNLNEKEPESSKLNLNENVEGAKHEEMIEKPQV-EKNDGNFAEAVKPDT 240

Query: 241 HVSDEKEKELEENQNPNQQDIELEGEIKDKAQAAATQEKSEKHSETNKTIEVTENGNHRN 300
            VSD++E  L ENQNPNQQDIELE EIKDKA  A  +EKSEKH+ETNKTIEVTENGNHRN
Sbjct: 241 LVSDKQENAL-ENQNPNQQDIELEEEIKDKAGEA--EEKSEKHTETNKTIEVTENGNHRN 289

Query: 301 EAGEVKP 308
             GEVKP
Sbjct: 301 GTGEVKP 289

[Close]

BLAST of Spg003690 vs. ExPASy TrEMBL
Match: A0A5D3BH67 (Methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00350 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 8.8e-112
Identity = 243/303 (80.20%), Postives = 262/303 (86.47%), Query Frame = 0


Query: 5   QFFPKQGKSPKKHEVIFTAPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQG SP+KHEVIFT PTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGNSPRKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVTPPIESEHPKRRRSSVSKKDLKETEAEPEVLEEKKEVDNQDAGKDENMADAEV 124
           ISEKAK +PP+ESEHPKR+R+SVSKKDLKETEAEPEVLEEKKEVDN DAGKDE+MADAEV
Sbjct: 88  ISEKAKASPPMESEHPKRKRTSVSKKDLKETEAEPEVLEEKKEVDNPDAGKDESMADAEV 147

Query: 125 KDDDKKENQDEKEAKDDDKKENQDEKEAKDEAAEAEAPKPDEQLNAENDAEKQEHKTTNE 184
                         KD +KKEN DEKE K+EAAEAE PKPD+QLNA+N+AEKQEHK TNE
Sbjct: 148 --------------KDANKKENIDEKETKNEAAEAEPPKPDDQLNADNEAEKQEHKITNE 207

Query: 185 SDQEKLERNLNEKEPESSILNLNENLEAAKHEENIEQPQVEEKNDGNLGETAKPETHVSD 244
           S+QEKLE NLNEKEPESS LNLNENLE AKHEE IEQPQV EKNDGN  E  KP+T VSD
Sbjct: 208 SNQEKLEGNLNEKEPESSKLNLNENLEGAKHEEKIEQPQV-EKNDGNFAEAVKPDTLVSD 267

Query: 245 EKEKELEENQNPNQQDIELEGEIKDKAQAAATQEKSEKHSETNKTIEVTENGNHRNEAGE 304
           ++E  L ENQNPNQQ+IELEGEIKDKA AA  +EKSEKH+ETNKTIEVTENGNHRN  GE
Sbjct: 268 KQENAL-ENQNPNQQEIELEGEIKDKAGAA--EEKSEKHTETNKTIEVTENGNHRNGTGE 312

Query: 305 VKP 308
           VKP
Sbjct: 328 VKP 312

[Close]

BLAST of Spg003690 vs. ExPASy TrEMBL
Match: A0A1S3C687 (methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=LOC103497143 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 8.8e-112
Identity = 243/303 (80.20%), Postives = 262/303 (86.47%), Query Frame = 0


Query: 5   QFFPKQGKSPKKHEVIFTAPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQG SP+KHEVIFT PTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGNSPRKHEVIFTTPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVTPPIESEHPKRRRSSVSKKDLKETEAEPEVLEEKKEVDNQDAGKDENMADAEV 124
           ISEKAK +PP+ESEHPKR+R+SVSKKDLKETEAEPEVLEEKKEVDN DAGKDE+MADAEV
Sbjct: 88  ISEKAKASPPMESEHPKRKRTSVSKKDLKETEAEPEVLEEKKEVDNPDAGKDESMADAEV 147

Query: 125 KDDDKKENQDEKEAKDDDKKENQDEKEAKDEAAEAEAPKPDEQLNAENDAEKQEHKTTNE 184
                         KD +KKEN DEKE K+EAAEAE PKPD+QLNA+N+AEKQEHK TNE
Sbjct: 148 --------------KDANKKENIDEKETKNEAAEAEPPKPDDQLNADNEAEKQEHKITNE 207

Query: 185 SDQEKLERNLNEKEPESSILNLNENLEAAKHEENIEQPQVEEKNDGNLGETAKPETHVSD 244
           S+QEKLE NLNEKEPESS LNLNENLE AKHEE IEQPQV EKNDGN  E  KP+T VSD
Sbjct: 208 SNQEKLEGNLNEKEPESSKLNLNENLEGAKHEEKIEQPQV-EKNDGNFAEAVKPDTLVSD 267

Query: 245 EKEKELEENQNPNQQDIELEGEIKDKAQAAATQEKSEKHSETNKTIEVTENGNHRNEAGE 304
           ++E  L ENQNPNQQ+IELEGEIKDKA AA  +EKSEKH+ETNKTIEVTENGNHRN  GE
Sbjct: 268 KQENAL-ENQNPNQQEIELEGEIKDKAGAA--EEKSEKHTETNKTIEVTENGNHRNGTGE 312

Query: 305 VKP 308
           VKP
Sbjct: 328 VKP 312

[Close]

BLAST of Spg003690 vs. ExPASy TrEMBL
Match: A0A6J1CQ83 (methyl-CpG-binding domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC111013157 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 4.4e-111
Identity = 242/303 (79.87%), Postives = 268/303 (88.45%), Query Frame = 0


Query: 5   QFFPKQGKSPKKHEVIFTAPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQGKSPKK EVIFT PTGEEINNKRKL+QYLKAHPGGPA+AEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGKSPKKQEVIFTTPTGEEINNKRKLEQYLKAHPGGPASAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVTPPIESEHPKRRRSSVSKKDLKETEAEPEVLEEKKEVDNQDAGKDENMADAEV 124
           ISEKAK TPP+ESEHPKR+R+SVS+KDLKETEAEPEVLEE KEV++QDAGK E++ADAEV
Sbjct: 88  ISEKAKATPPMESEHPKRKRTSVSRKDLKETEAEPEVLEEMKEVNDQDAGKYESIADAEV 147

Query: 125 KDDDKKENQDEKEAKDDDKKENQDEKEAKDEAAEAEAPKPDEQLNAENDAEKQEHKTTNE 184
           K+DDK ENQDEKE   + K ENQDE++ KDEAA AEA K D QLNA+N+AE  EHK T E
Sbjct: 148 KNDDKMENQDEKET--EVKDENQDEEKTKDEAAVAEAAKSDNQLNADNNAE--EHKITAE 207

Query: 185 SDQEKLERNLNEKEPESSILNLNENLEAAKHEENIEQPQVEEKNDGNLGETAKPETHVSD 244
           SDQEKLERNLNEKEP+SS LNLNENLE AKHEE IEQPQ+EEKND NLGETAKP+T +SD
Sbjct: 208 SDQEKLERNLNEKEPDSSKLNLNENLEGAKHEEKIEQPQIEEKNDSNLGETAKPDTVISD 267

Query: 245 EKEKELEENQNPNQQDIELEGEIKDKAQAAATQEKSEKHSETNKTIEVTENGNHRNEAGE 304
            KE ELEE Q PNQQDIELEGEI+DK  AAA  E SEKH+ETN+T EVTENGNH+N+AGE
Sbjct: 268 VKESELEEKQKPNQQDIELEGEIEDK--AAAALENSEKHTETNQTKEVTENGNHKNDAGE 324

Query: 305 VKP 308
           VKP
Sbjct: 328 VKP 324

[Close]

BLAST of Spg003690 vs. ExPASy TrEMBL
Match: A0A6J1G2N9 (methyl-CpG-binding domain-containing protein 11-like OS=Cucurbita moschata OX=3662 GN=LOC111450270 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 1.1e-109
Identity = 243/322 (75.47%), Postives = 270/322 (83.85%), Query Frame = 0


Query: 5   QFFPKQGKSPKKHEVIFTAPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSAR 64
           +FFPKQG SPKK+EVIF  PTGEE +NKRKLDQYLK+HPGGPA+AEFDWGTGETPRRSAR
Sbjct: 28  KFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQYLKSHPGGPASAEFDWGTGETPRRSAR 87

Query: 65  ISEKAKVTPPIESEHPKRRRSSVSKKDLKETEAEP-EVLEEKKEVDNQDAGKDENMADAE 124
           ISEKAKV  P+ESEHPKR+R+SVSKK LKE E EP EV EEKKEVDNQDAGKDE +ADAE
Sbjct: 88  ISEKAKVISPMESEHPKRKRTSVSKKGLKEIETEPAEVREEKKEVDNQDAGKDETIADAE 147

Query: 125 VKDDDKKENQDE------------------KEAKDDDKKENQDEKEAKDEAAEAEAPKPD 184
           VKDDDK E +DE                   + KD DKKENQDEKE KDEAAEAE PKPD
Sbjct: 148 VKDDDKNETKDEAAEADPPKPDDQLNADNDADIKDADKKENQDEKETKDEAAEAEPPKPD 207

Query: 185 EQLNAENDAEKQEHKTTNESDQEKLERNLNEKEPESSILNLNENLEAAKHEENIEQPQVE 244
           +QLNA+NDAEKQEHK T+ES+QEKLERNLNEKEPESS LNLNENLE AKH+E IEQPQVE
Sbjct: 208 DQLNADNDAEKQEHKITSESEQEKLERNLNEKEPESSKLNLNENLEGAKHDEKIEQPQVE 267

Query: 245 EKNDGNLGETAKPETHVSDEKEKELEENQNPNQQDIELEGEIKDKAQAAATQEKSEKHSE 304
           EKND  LGET KP+T +SD +EKE +ENQ P +QDIELEGEIKDK  AAAT+EK+EKH+E
Sbjct: 268 EKNDSTLGETVKPDTLLSDRQEKE-QENQKPCEQDIELEGEIKDK--AAATEEKNEKHTE 327

Query: 305 TNKTIEVTENGNHRNEAGEVKP 308
           TNK+IE TENG+HRN+AGEVKP
Sbjct: 328 TNKSIEATENGSHRNDAGEVKP 346

[Close]

BLAST of Spg003690 vs. TAIR 10
Match: AT1G15340.1 (methyl-CPG-binding domain 10 )

HSP 1 Score: 100.1 bits (248), Expect = 3.2e-21
Identity = 111/321 (34.58%), Postives = 175/321 (54.52%), Query Frame = 0


Query: 6   FFPKQGKSPKKHEVIFTAPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARI 65
           F+PK+  +P+K E++F APTGEEI+++++L+QYLKAHPG P  +EF+W TGETPRRS+RI
Sbjct: 22  FYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVISEFEWTTGETPRRSSRI 81

Query: 66  SEKAKVTPPIESEHP--KRRRSSVSKKDLKETEAEPEVLEEKKEVDNQDAGKDEN----- 125
           S+K K T P   + P  K+RRSS++KKD KE   + E    K+ +D    GK EN     
Sbjct: 82  SQKVKATTPTPDKEPLLKKRRSSLTKKDNKEAAEKNEEAAVKENMDVDKDGKTENAEAEK 141

Query: 126 ---------MADAEVKDDDKKENQDEKEAKDDDKKENQDEKEAKDEAAEAEAPKPDEQLN 185
                    +A+AE ++++ ++ + EK  K+ +K E    KE + E AEAE  K  E+  
Sbjct: 142 EKEKEGVTEIAEAEKENNEGEKTEAEKVNKEGEKTE--AGKEGQTEIAEAEKEKEGEKAE 201

Query: 186 AEN-DAE-KQEHKTTNESDQEKLERNLNEKE--PESSILNLNENLEAAKHEENIEQPQVE 245
           AEN +AE  ++ K + E D  +LE+     E   E S +   ++ E  + +E + +  VE
Sbjct: 202 AENKEAEVVRDKKESMEVDTSELEKKAGSGEGAEEPSKVEGLKDTEMKEAQEVVTEADVE 261

Query: 246 EKNDGNLGETAKPETHVSDEKEKELEENQNPNQQDIELEGEIKDKAQAAATQEKSEKHSE 305
           +K         K E   S   E   E+N    + +++ + E  DK + +   ++    +E
Sbjct: 262 KK-----PAEEKTENKGSVTTEANGEQNVTLGEPNLDADAE-ADKGKESKEYDEKTTEAE 321

Query: 306 TNKTIEVTENGNHRNEAGEVK 307
            NK  +  E+   + EA   K
Sbjct: 322 ANKENDTQESDEKKTEAAANK 334

[Close]

BLAST of Spg003690 vs. TAIR 10
Match: AT3G15790.1 (methyl-CPG-binding domain 11 )

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-18
Identity = 93/235 (39.57%), Postives = 130/235 (55.32%), Query Frame = 0


Query: 6   FFPKQGKSPKKHEVIFTAPTGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARI 65
           F+P +  S KK EV+F APTGEEI+N+++L+QYLK+HPG PA AEFDW T  TPRRSARI
Sbjct: 22  FYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSGTPRRSARI 81

Query: 66  SEKAKVTPPIESEHPKRR---RSSVSKKDLKETEAEPEVLEEKKEVDNQDAGKDENMADA 125
           SEK K TP  + E PK+R   +S VSKKD +  ++E    EE   V + +    E +A+ 
Sbjct: 82  SEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGG-EENSHVKDTEMNPPEGIAEN 141

Query: 126 EVKDDDKKENQDEKEAKDDDKKENQDEKEAKDEA---AEAEAPKPDEQLNAENDAEKQEH 185
           E   D     + E+    +D KEN   +E  + A    E E+ K ++ L++ +D  K+  
Sbjct: 142 ENVTDKNGSGETERV---NDAKENIVAEETPNAAPVQEEGESMK-EKALDSVDDKSKETD 201

Query: 186 KTTNESDQEKLERNLNEKEPESSILNLNENLEAAKHEENIEQPQVEEKNDGNLGE 235
           K  +    EK   ++ +K  E+S    N   E   HEEN    + E K     GE
Sbjct: 202 KEKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNHEENGLTTEAEGKEKTAEGE 251

The following BLAST results are available for this feature:

BLAST of Spg003690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457463.1	1.8e-111	80.20	PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo] >...	[more]
XP_023545855.1	5.3e-111	76.09	methyl-CpG-binding domain-containing protein 11-like [Cucurbita pepo subsp. pepo...	[more]
XP_022143242.1	9.1e-111	79.87	methyl-CpG-binding domain-containing protein 11-like [Momordica charantia]	[more]
XP_004139304.1	5.9e-110	79.54	methyl-CpG-binding domain-containing protein 11 [Cucumis sativus] >KAE8651531.1 ...	[more]
XP_022946072.1	2.2e-109	75.47	methyl-CpG-binding domain-containing protein 11-like [Cucurbita moschata]	[more]

BLAST of Spg003690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI36	4.5e-20	34.58	Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LW00	1.6e-17	39.57	Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Spg003690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG01	7.2e-114	80.13	MBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G006830 PE=4 SV...	[more]
A0A5D3BH67	8.8e-112	80.20	Methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo var. makuwa...	[more]
A0A1S3C687	8.8e-112	80.20	methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1CQ83	4.4e-111	79.87	methyl-CpG-binding domain-containing protein 11-like OS=Momordica charantia OX=3...	[more]
A0A6J1G2N9	1.1e-109	75.47	methyl-CpG-binding domain-containing protein 11-like OS=Cucurbita moschata OX=36...	[more]

BLAST of Spg003690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15340.1	3.2e-21	34.58	methyl-CPG-binding domain 10	[more]
AT3G15790.1	1.1e-18	39.57	methyl-CPG-binding domain 11	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 132..159
None	No IPR available	GENE3D	3.30.890.10		coord: 6..100 e-value: 1.5E-5 score: 26.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..255
None	No IPR available	PANTHER	PTHR33729:SF6	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11-LIKE	coord: 5..302
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 7..56 e-value: 1.6E-4 score: 21.3
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 1..58 score: 9.478137
IPR039622	Methyl-CpG-binding domain-containing protein 10/11	PANTHER	PTHR33729	METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 5..302
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 9..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003690.1	Spg003690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding