Spg003671 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003671
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	BRCA1-associated protein
Location	scaffold4: 47494558 .. 47499231 (-)
RNA-Seq Expression	Spg003671
Synteny	Spg003671

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCGGCCACCGTGTCTCGTAAAATCTCTCTCAACTGTAGAACCGACTCCGACGGAGCCTCCGCCATGTTTTCCCTGCAAATTCATTCAGTGGACACCGATCACCCTCTCACCGTCGGAATTTCGCCGGACGAATCTTCAACCACCAGCACCATTTCTCAACGAAACCACGCAGCTTCTTACGCCAACACGAAATTCAGCGAACGAAGAGGTATCGTCCACTTATTCCGAAGCATTTTGCCCTCATCGCTCCCGAACCCTAGCCCTCAGTCCACGATCCTCTTTGTTGTTGCCGTTCCGAACTATTTGTCATACGATGATTTCGTCAGCTTCTGTGGCTCTCGCATCAACCATGTCTCCGAGGTTCTCTTCATCAGGTAACCCTTGTTATTGCCTACGTTTTTTTTTTCTTTTGTCTTTGTGGTCGATGAATCGAATTCTACTGATTGGAAGAACATCGAGCCGAGCGTTCTGGATTTACTTGGTTTCCCATCTCAAACGTACCTTGATTCTGGAGAAGGTTCTTTGATGTTGGATTATGAATAGCGTGTCTGATCAAGGAAAATGGCTAATGAGACTCGAGACTTGAAATCTTTTATTTCCATGGATTCTTTGCATGGGTTTTTCTTTGGTATTCACGAAGCACAATTGAGTTGTTGATTGTGACTTTATGATAGCTGTTACGTTGGAATTCTCTTGGAAATGGCTTGTTCTTCTTCTGTGCTTTGAGTGAAACTGTCACTACGTTTAAGGCGATCATTGGAATGATGCTATTGTCTGAATATAGGTTGCATTTGATAGAAGGGTAGTTGGTGGCAGTTTTGATTGCTTTTCTTGTTTTTTTACATGCCGCGCTCTCGGTTGTATCTTTAGGAACGATGGTGTGGAAGAAAGATACAGTGTTTTGATTAAGCTTGAAAATCAGATGGATGCCGATGGGTTTTTTGGCAATTTGAATGGCAGGAAGTTTTCTCCCTCTGAGGTACAAGAACTGCAATTTGAGTCATTCATTTGATTTAATGGAAATATGCTCATATAATATTGCCACACATATTATTCATTTTTAGGCTGAGGTATGTCATATTCTGTTTCTGATGTCTGTCGAGTACACAGAATCAGCAGAGGTAGCTGGGTCGCCTACTGACGGTTGTACTGAATTGCCTACTTGCCCCGTTTGCCTGGGTGAGTCAAGTGTTTCTGTTCCTCTGTCTGCATGTGCCATCTGAGGCTTGATTTATTTTGGTTGAGTTCTGATAGTCTAATTCTTCGAACCTAATCCATTTGTATGTTAGAGAGATTTGATCCTGATACTAGTGGAATAATTCACACTCTATGTGACCATTCGTTTCACTGCCCCTGCATTTCAAAATGGACTTCTTTATCTTGTCAGGTGAATACATACTCTGTTCTTTCTATTATCGTTTTGCACTAGTTTTTCTACCTCTGAACCCTCACTTGACATTACCTGAAAACTAATGGTGATGCAGGAGTTTTTGTGTTTGTTATGACCATCTTAATTTGTAAATTGAAAAATACACCATGATTGAAATGTCAATGAACTTATCTTTACATGACTTTTCACCTCCTCATGATATGATATAGAACAATAGCTATAACTTACTGCGTTTGATATATATAATATTATTTTTTATTTTGAACTACTAATAATGTGAAATACAACAATTTACATTTGTATGAGTTCTATCTGGTTATGCTCTCTGTGCGAAGCCTTTTGGTATTGGTCAATTTGTTTGAAAATTGAAACTGTTACATTGGACGATCACACCATCTATCTATTTTTGGCAAGTCATCAGGTCTGTCGATTCTGTCAGCAGCAGGATGAGAAACAAGCTTGCTTCATTTGTGGAACTGTGGAGAATCTCTGGGTGTGCGTGATATGTGGCTTTCTAGGATGTGGAAGGTTACTAGCTAATATTGACTTCCCTTCTTTTTCTTTTTCTTGTGCTTCTTTTTTCTTCTTCGTTTTTTTTTTTTCTTTCACTTATATTGACTTCTCTTCTTATATATTCTAATTTGACATATTCAAGAAGACTGCTATCAGGAAAATACTTCACTTTCTGTCATAACTCATAACAAAAAATGATAATCGTGATGTTATTTACTGCCTTGCATCATATTCATCTTAGGTATAAGGAAGGGCATGCAATCAGGCACTGGAAAAATATGCATCACTGCTATTCTCTTGATTTAAGAACACAGCAAATTTGGGATTATGTTGGTGACACTTATGTTCACCGCTTGAACCATTCAAAAGTTGATGGTAAGTTTGGGGAAATGAATTCGCACTGTATCTCACATGAAGGAGAGTGTAGAACTTGTGAATATGATGAAGACTCCGGAATCAATGAGGCCCTGTACAGCAGTAAAGTTGAAGCAGTATGTTTTTCTGACAATTTTCTTTGGCATACGTATGACATGAATTCTCTTTTTTATTATTTTGTAAACATGCTGTTTCCATTAGGCAGTTGTGGTCTGAGAATTGTATGGACTCAGGGCCAAATTTTAGTCCATGTGACATTGTACGTTTAAAGGTGGCATTTAGTACCTTAATCACATTATTCATTCAAGTTTATTTTCCTGATTCGAATATTTGCAAACAGATTGTGGATGAATATAATCGGCTTCTTGCAACCCAGCTGGAAACTCAGAGACAAGTATGTAATCTAGCTTCTCTACTTTAGAATGGGCTTCTCTAATTTTTCTTGCATCTTCTTATTGTGATATTGCAGTTCATTTTTATTCAATATTTCTTGCTACTTTCAACACTACCTTTGGCCCCCCAATATTAGTTCACGGGGAAGATATTCATATGATATAGCAAATTTCCGGAGAATTTTTTTCGGAAGTGAAAGTTGAGTATTTGTCAGCATTAATATTTTAGTTCTTGGCTTTTCTTGTTTTTAATTTTTTTTTTTTTTTTTTTGAAATATATTTATTGCCATGCATAGATATAATTCTTGGCATATGATGAGAGAAGACAAAATGTACCGCAAATGCTGAAAAATGAATGGCTCTTTGTAACTCAGCCTGACTCCATTTCTGTACCCCAGACTTCAAACTCAATTGACTTGAGCAAGGCATTGGATCAGATAATAAACCATATATTCATGAATCAGGATTTTGGTTCAGTATTGGCTAGATATGGTTGTTTCTAAATCAAACAATAACGTGTTTCAAGACCTTCCAATGACCTATAGCATACCACTTTGAACCATGCGGCACATCCATGTAATATCTTTATAAAAATTCTTATTTAGTTGCTTGAACTTGAAGTAAAGTGGAAATAAACGTTTTTTCCCCTTATTAATTAAGCAATCGCATGTACACACATGCATATAGTGATCAATTGCTTTGCTTTTGTTTCGACAGTATTATGAATCTCTGCTGGCAGAGGCGAAAAGCAAAAGGGAAGTTTCCATTTCTGAAGCAGTGGAAGAGGCTTTAATATCCAAGACTCAGGACATTCAAGACAAACTTGAAAAATTTGTCAAGGAGAAAAATGCTGTTTCTGACGTACGTTGTACATATTATATCATTCTCACAGTTTAGATGATCACGCTTTTTCATGCCCAATGACTATCTGGTCTTTTCATTTCTTTATCTGTGCAATATAATTATGTGTTTTTCTAAATACTTCCCCCCTTCTAGGTAAATCAGAAGCTCATCAAGAACCAAGAAATGTGGGTGGCTAAAGCAAAGCAAATTGAAGAAAGGTACATAATCTTGCCTTCCTTGATTTGAAGGATTTCTACAATACCTTGTCCAATAGTATGATATGAAGATGACATAATTAATCAGCTATTCGGAACTTGGTTCAAGAAATTAAGCTGGTAAATTACAACCTCTTTTAGTCCACCATTTCCTTATTTCTGCTGCAGCAATCTTTGCTTTTCAGGATGCATAAAGGTATTGGATTTATCGCTGACTTTAGCCTCCAATAGTGAACGTTTACATGAGAAGTAAAAAGAAAAATGTAACCTCAGATAATTATTTAAGATATATGACACATAGATTTAGTAGGAATGGAGTTAAGAATGGGAGTATATTGAATAATACTTTACCAGCATCGGTACGCACTAGTATGGTGTCAAGTTCTTGCCTTAATAGTCACTATGGGATTAACTCATTACACTTTGTATGACAGAGAACTCGCTTCGTTGAAGTCGAGGAATGAGACAATACATGATTTGGAAGAACAGGTCTGCATTTACACCACGCCGTAAGTTTGTTTTAGTTCTTGCGCTTACCTCTGTTTGGTTATGATGTTACAGATTAGAGATCTTACAGTCTACATTGAAGCCCAAAAGACACTCAATAACATCACAGATTCAGACGACATAAAAGGAGGAACACTCTTGCCTGTACCTGCAAAAGAATCTTCCCCCGGCAACGGCAGAAAGAAGAAGGGTGGCCGAAGGCGGAATTAGAGATGCTTGTTCTTGTATTCACACAGGTTCTGCTTGTAAACATTTTGCTTAAACTAAGGGGATATGCTTTCTTTCATTCATGTTCCAAAAGAAAAGATGTTTGATTGACTGAGATCTTTGATTTGTTGTCACATGTAAAGCAATCATGTCTATAGCTTAGTATTAGGGTATATATTTTAGACACTGATCTGATTTTTCTCGCAATCAACAAGTGCCATTGTTCTCTG

mRNA sequence

ATGGGATTAACTCATTACACTTTGTATGACAGAGAACTCGCTTCGTTGAAGTCGAGGAATGAGACAATACATGATTTGGAAGAACAGATTAGAGATCTTACAGTCTACATTGAAGCCCAAAAGACACTCAATAACATCACAGATTCAGACGACATAAAAGGAGGAACACTCTTGCCTGTACCTGCAAAAGAATCTTCCCCCGGCAACGGCAGAAAGAAGAAGGGTGGCCGAAGGCGGAATTAG

Coding sequence (CDS)

ATGGGATTAACTCATTACACTTTGTATGACAGAGAACTCGCTTCGTTGAAGTCGAGGAATGAGACAATACATGATTTGGAAGAACAGATTAGAGATCTTACAGTCTACATTGAAGCCCAAAAGACACTCAATAACATCACAGATTCAGACGACATAAAAGGAGGAACACTCTTGCCTGTACCTGCAAAAGAATCTTCCCCCGGCAACGGCAGAAAGAAGAAGGGTGGCCGAAGGCGGAATTAG

Protein sequence

MGLTHYTLYDRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN

Homology

[Close]

BLAST of Spg003671 vs. NCBI nr
Match: KAG7030373.1 (BRCA1-associated protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 131.7 bits (330), Expect = 2.8e-27
Identity = 68/80 (85.00%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1   MGLTHYTLYDRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPV 60
           +GLT+YTLY REL SLK RNE IHDLEEQIRDLTVYIEAQKTLN IT SDDIKGGT+LPV
Sbjct: 432 VGLTNYTLYARELTSLKWRNEKIHDLEEQIRDLTVYIEAQKTLNKITGSDDIKGGTVLPV 491

Query: 61  PAKESSPGNGRKKKGGRRRN 81
           PAKESSP +GRKKKG RRRN
Sbjct: 492 PAKESSPSSGRKKKGSRRRN 511

[Close]

BLAST of Spg003671 vs. NCBI nr
Match: XP_004139299.1 (BRAP2 RING ZnF UBP domain-containing protein 1 [Cucumis sativus] >KGN60697.1 hypothetical protein Csa_019257 [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 6.2e-27
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 10  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGN 69
           +RELASLKSRNE IHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGN
Sbjct: 417 ERELASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGN 476

Query: 70  GRKKKGGRRRN 81
           GRKKKG RRR+
Sbjct: 477 GRKKKGNRRRS 487

[Close]

BLAST of Spg003671 vs. NCBI nr
Match: XP_008456935.1 (PREDICTED: BRCA1-associated protein [Cucumis melo] >KAA0063536.1 BRCA1-associated protein [Cucumis melo var. makuwa] >TYJ97863.1 BRCA1-associated protein [Cucumis melo var. makuwa])

HSP 1 Score: 128.3 bits (321), Expect = 3.1e-26
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 10  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGN 69
           +RELASLKSRNE IHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSP N
Sbjct: 417 ERELASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPAN 476

Query: 70  GRKKKGGRRRN 81
           GRKKKG RRR+
Sbjct: 477 GRKKKGNRRRS 487

[Close]

BLAST of Spg003671 vs. NCBI nr
Match: XP_022143225.1 (BRCA1-associated protein [Momordica charantia])

HSP 1 Score: 125.9 bits (315), Expect = 1.5e-25
Identity = 65/71 (91.55%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 10  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGN 69
           +RELASLKSR+E IHDLEEQIRDLTVYI AQKTL+NITDSDDIKGGTLLPVPAKESSPGN
Sbjct: 417 ERELASLKSRSEKIHDLEEQIRDLTVYIGAQKTLDNITDSDDIKGGTLLPVPAKESSPGN 476

Query: 70  GRKKKGGRRRN 81
            RKKKGGRRRN
Sbjct: 477 SRKKKGGRRRN 487

[Close]

BLAST of Spg003671 vs. NCBI nr
Match: XP_038889999.1 (BRAP2 RING ZnF UBP domain-containing protein 1 [Benincasa hispida])

HSP 1 Score: 125.6 bits (314), Expect = 2.0e-25
Identity = 65/71 (91.55%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 10  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGN 69
           +RELA LK RNE IHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSP N
Sbjct: 417 ERELALLKLRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPSN 476

Query: 70  GRKKKGGRRRN 81
           GRKKKG RRRN
Sbjct: 477 GRKKKGSRRRN 487

[Close]

BLAST of Spg003671 vs. ExPASy Swiss-Prot
Match: E5KGE0 (BRAP2 RING ZnF UBP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRIZ1 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.5e-09
Identity = 35/71 (49.30%), Postives = 50/71 (70.42%), Query Frame = 0


Query: 10  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNI-TDSDDIKGGTLLPVPAKESSPG 69
           +RE A L S++E I DL+EQIRD+TV+IEA+KTL  + +D+D I+ GT+LPVP       
Sbjct: 417 EREAALLGSKDEMITDLQEQIRDITVFIEAKKTLKKMSSDTDGIREGTVLPVPISPEPVS 476

Query: 70  NGRKKKGGRRR 80
           + R++K   RR
Sbjct: 477 SVRRQKKSNRR 487

[Close]

BLAST of Spg003671 vs. ExPASy TrEMBL
Match: A0A0A0LIZ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G007410 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.0e-27
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 10  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGN 69
           +RELASLKSRNE IHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGN
Sbjct: 417 ERELASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGN 476

Query: 70  GRKKKGGRRRN 81
           GRKKKG RRR+
Sbjct: 477 GRKKKGNRRRS 487

[Close]

BLAST of Spg003671 vs. ExPASy TrEMBL
Match: A0A5D3BF17 (BRCA1-associated protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00750 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.5e-26
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 10  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGN 69
           +RELASLKSRNE IHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSP N
Sbjct: 417 ERELASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPAN 476

Query: 70  GRKKKGGRRRN 81
           GRKKKG RRR+
Sbjct: 477 GRKKKGNRRRS 487

[Close]

BLAST of Spg003671 vs. ExPASy TrEMBL
Match: A0A1S3C5L6 (BRCA1-associated protein OS=Cucumis melo OX=3656 GN=LOC103496733 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.5e-26
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 10  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGN 69
           +RELASLKSRNE IHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSP N
Sbjct: 417 ERELASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPAN 476

Query: 70  GRKKKGGRRRN 81
           GRKKKG RRR+
Sbjct: 477 GRKKKGNRRRS 487

[Close]

BLAST of Spg003671 vs. ExPASy TrEMBL
Match: A0A6J1CN86 (BRCA1-associated protein OS=Momordica charantia OX=3673 GN=LOC111013142 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.3e-26
Identity = 65/71 (91.55%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 10  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGN 69
           +RELASLKSR+E IHDLEEQIRDLTVYI AQKTL+NITDSDDIKGGTLLPVPAKESSPGN
Sbjct: 417 ERELASLKSRSEKIHDLEEQIRDLTVYIGAQKTLDNITDSDDIKGGTLLPVPAKESSPGN 476

Query: 70  GRKKKGGRRRN 81
            RKKKGGRRRN
Sbjct: 477 SRKKKGGRRRN 487

[Close]

BLAST of Spg003671 vs. ExPASy TrEMBL
Match: A0A6J1KCX7 (BRCA1-associated protein OS=Cucurbita maxima OX=3661 GN=LOC111493779 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.3e-24
Identity = 64/71 (90.14%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 10  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGN 69
           +RELASLKSRNE IHDLEEQIRDLTVYIEAQKTLN ITDSDDIKGGTLLPVPAKESSP +
Sbjct: 417 ERELASLKSRNEKIHDLEEQIRDLTVYIEAQKTLNKITDSDDIKGGTLLPVPAKESSPSS 476

Query: 70  GRKKKGGRRRN 81
           GR KKG RRRN
Sbjct: 477 GR-KKGSRRRN 486

[Close]

BLAST of Spg003671 vs. TAIR 10
Match: AT2G42160.1 (zinc finger (ubiquitin-hydrolase) domain-containing protein )

HSP 1 Score: 62.0 bits (149), Expect = 2.5e-10
Identity = 35/71 (49.30%), Postives = 50/71 (70.42%), Query Frame = 0


Query: 10  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNI-TDSDDIKGGTLLPVPAKESSPG 69
           +RE A L S++E I DL+EQIRD+TV+IEA+KTL  + +D+D I+ GT+LPVP       
Sbjct: 417 EREAALLGSKDEMITDLQEQIRDITVFIEAKKTLKKMSSDTDGIREGTVLPVPISPEPVS 476

Query: 70  NGRKKKGGRRR 80
           + R++K   RR
Sbjct: 477 SVRRQKKSNRR 487

The following BLAST results are available for this feature:

BLAST of Spg003671 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030373.1	2.8e-27	85.00	BRCA1-associated protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_004139299.1	6.2e-27	94.37	BRAP2 RING ZnF UBP domain-containing protein 1 [Cucumis sativus] >KGN60697.1 hyp...	[more]
XP_008456935.1	3.1e-26	92.96	PREDICTED: BRCA1-associated protein [Cucumis melo] >KAA0063536.1 BRCA1-associate...	[more]
XP_022143225.1	1.5e-25	91.55	BRCA1-associated protein [Momordica charantia]	[more]
XP_038889999.1	2.0e-25	91.55	BRAP2 RING ZnF UBP domain-containing protein 1 [Benincasa hispida]	[more]

BLAST of Spg003671 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
E5KGE0	3.5e-09	49.30	BRAP2 RING ZnF UBP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Spg003671 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIZ8	3.0e-27	94.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G007410 PE=4 SV=1	[more]
A0A5D3BF17	1.5e-26	92.96	BRCA1-associated protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3C5L6	1.5e-26	92.96	BRCA1-associated protein OS=Cucumis melo OX=3656 GN=LOC103496733 PE=4 SV=1	[more]
A0A6J1CN86	7.3e-26	91.55	BRCA1-associated protein OS=Momordica charantia OX=3673 GN=LOC111013142 PE=4 SV=...	[more]
A0A6J1KCX7	5.3e-24	90.14	BRCA1-associated protein OS=Cucurbita maxima OX=3661 GN=LOC111493779 PE=4 SV=1	[more]

BLAST of Spg003671 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42160.1	2.5e-10	49.30	zinc finger (ubiquitin-hydrolase) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..80
None	No IPR available	PANTHER	PTHR24007	BRCA1-ASSOCIATED PROTEIN	coord: 10..80
IPR033273	RING domain containing protein BRIZ1/BRIZ2	PANTHER	PTHR24007:SF10	BRAP2 RING ZNF UBP DOMAIN-CONTAINING PROTEIN 1	coord: 10..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003671.1	Spg003671.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0010029	regulation of seed germination
cellular_component	GO:0000151	ubiquitin ligase complex
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding