Spg003648 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003648
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Alba domain-containing protein
Location	scaffold4: 46305249 .. 46307452 (+)
RNA-Seq Expression	Spg003648
Synteny	Spg003648

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCCCCTTCAATTTTTCCCGCTCCTCAGAATTTTCCCGAGAAAATTGCGAGAGAAAATCTTTTCTTGTTTGTTTGATCTGAGAGAAACAGAAATATATAGTGAGAGAGAGTTTGAAGTTAAAAAAAAAAAAAAAACCCAAGAAATGGCAACGATTGCAGTATCTGGAGCCGCCACTGAAACACAGAAGAAGAACAGAATTCAGGTTTCGAACACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGGTATACACAAATCCATTCCTTCATTAATCGATCCTTCGATTTGATTATAATGAGTGAGATTTCCGATTTGCGATTTCGATCTGTTTTTATTTGTTTCTCGAGAAATGGAATCGAGACGTGCAATGTAAGAACCGTCCATGAATTTGTGTGATTCTTCTGAATTGCTTTACGATTTCAACGATTTTATTTGCGGAATCTTCTGATTTTAGTTTCTTGGCAGTTTGGTTGTTTGTATTAGAAATTTGAATAATGTTGCTCTCTGTTTGCCCTAATATCCCCTTTTCTTCCTTTTCGATGAAACGTCATTGTTCTAATTCTTGATTCAGAGGTATATTCAACAGCACAATGAGGTTGAGCTTTCTGCATTGGGAATGGGTACTGTTTTGTTTCTTGAACGTCTTTGAAATTTTCTGTTATTCGACACATCATATCTAATGAAATTTTGGTTTTCTTGGCTCAAATCCTTTGCATCGTTACAGCAATCACTACCGTTGTCACAATTGCGGAGATTCTCAAGAACAATGGGCTGGCTACAGAGAAGAGTAATTCAATTTATTGTCTCTTTAATGCTAATTTATGTTCGTTCATTCATAAAATCTGTTGTTAAAAATGGTGATGACTGCTGATGGTTTGGTTTTGTTATGAAACAGAAGTTTTGACTTCTACAGTCGGCATGAAGGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCCAAGGTTGGTTCTTTTTTTAATGAAGCAATTTAAACTTTGATGAGACGTTAAACTTAATAAGCAATAAAATGAATGTTGCTGATTGGTTATGTTTTCATTTCTAGTTATGAACGTTGAGATAATTCTTGTGGGATTGTTTGATTTTTGATTAGTATGAGTTATGTTTGAGAATTTTATAGTTAAGTTCGAGGGATTGTATCACATGAATTTCTAGGTATGTTTACGTTTTTCATAGTTTGGATTAAAGCATTTCTATAGTTTGATCTTTAGTTTCTTAATTGAATGAATTTTATATGACTTATGAGTTATTTGGTAAAAGAAAAAGAAAAAAACACCTAATCTAGGTTTGAAGATGTATTAAATTTAAGACTACCAACTCAACTTCTTAAAAAAAAATCCTAATCTAAATTTAGTCAAGTTTTGTAACAATTTATGTGCAACAATTTAGTTCCTTGTAAAATGTGTCATTAAAATTTAATGAAATTCCTTCTTCACCTATGTAGATTGATAAAGACAAATTCTGTTTATAAACCATGAGTAAGTTTCATGATAAAAACACCTCATGGGATATTTTCATAATATGATTTAAATTGTTGTATACCTAAGTTAGGGAACTAAATTGTTATAAACTAGTTAAAGCGTGAAGTACTTTTGTAGGGACTAAATTTACCAATACCATTCAAGTTTAGTATTTGATGGAATGGAATTGAAAGTTATGATATTAATTTAGGCAGAGATTGAGATTCTGAAACTTGGTTTTTGTTGGTGTTTGGATTTTGATAGATTGAGATCGTTCTGGGAAAGTCTGAGAAATTTGATTCTCTGATGACTGCGGCCACAGCTGCGCCAGAGCCAGCAGCAGTTGCAGTTGCAGCTGCAGCAGCAACTGAAGAGAAAAAAGCAGAGGAAAGCAAGGAGGAGCAGCAGTAGAGAATCAGGAGAGGGGAAGAAAATATCTGATGTGTTACATTGTTGTAGTTTAAGAATCACAATGGCAATGTTATTAGGATAGGCTGTTTTCATTTTGAATTGCTTTTCTAGTTTTCATTTTTGGACAGTCACAGTTGTGAATGAGATGCCCTGCCATCACCTCCCCCCACAAACAAAAAAAAACCCCTTTTTCTTTCTCTATCAACTGTGTGTTGAGAAGGAAGCCTCTCTGTGTTGCATTTCTTACTTCATGTTTGATCTAATGAAGTGAATTTTTTTTTTCTTTTGGAATTTTCCCTTTTTATCTTTCC

mRNA sequence

ATGGCAACGATTGCAGTATCTGGAGCCGCCACTGAAACACAGAAGAAGAACAGAATTCAGGTTTCGAACACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGAGGTATATTCAACAGCACAATGAGGTTGAGCTTTCTGCATTGGGAATGGCAATCACTACCGTTGTCACAATTGCGGAGATTCTCAAGAACAATGGGCTGGCTACAGAGAAGAAAGTTTTGACTTCTACAGTCGGCATGAAGGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCCAAGATTGAGATCGTTCTGGGAAAGTCTGAGAAATTTGATTCTCTGATGACTGCGGCCACAGCTGCGCCAGAGCCAGCAGCAGTTGCAGTTGCAGCTGCAGCAGCAACTGAAGAGAAAAAAGCAGAGGAAAGCAAGGAGGAGCAGCAGTAG

Coding sequence (CDS)

ATGGCAACGATTGCAGTATCTGGAGCCGCCACTGAAACACAGAAGAAGAACAGAATTCAGGTTTCGAACACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGAGGTATATTCAACAGCACAATGAGGTTGAGCTTTCTGCATTGGGAATGGCAATCACTACCGTTGTCACAATTGCGGAGATTCTCAAGAACAATGGGCTGGCTACAGAGAAGAAAGTTTTGACTTCTACAGTCGGCATGAAGGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCCAAGATTGAGATCGTTCTGGGAAAGTCTGAGAAATTTGATTCTCTGATGACTGCGGCCACAGCTGCGCCAGAGCCAGCAGCAGTTGCAGTTGCAGCTGCAGCAGCAACTGAAGAGAAAAAAGCAGAGGAAAGCAAGGAGGAGCAGCAGTAG

Protein sequence

MATIAVSGAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAPEPAAVAVAAAAATEEKKAEESKEEQQ

Homology

[Close]

BLAST of Spg003648 vs. NCBI nr
Match: XP_004139384.1 (uncharacterized protein At2g34160 [Cucumis sativus])

HSP 1 Score: 224.6 bits (571), Expect = 5.6e-55
Identity = 133/143 (93.01%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 2   ATIAVSGA--ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 61
           ATIAVSGA  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT
Sbjct: 3   ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 62

Query: 62  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAPEP 121
           IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATA PE 
Sbjct: 63  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPE- 122

Query: 122 AAVAVAAAAATEEKKAEESKEEQ 143
             V   AAAA EEKKAEESKEEQ
Sbjct: 123 -TVVAVAAAAEEEKKAEESKEEQ 143

[Close]

BLAST of Spg003648 vs. NCBI nr
Match: XP_008456222.1 (PREDICTED: uncharacterized protein At2g34160 [Cucumis melo] >KAA0063590.1 alba DNA/RNA-binding protein [Cucumis melo var. makuwa] >TYK18437.1 alba DNA/RNA-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 223.8 bits (569), Expect = 9.6e-55
Identity = 132/144 (91.67%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 1   MATIAVSGA--ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV 60
           MATIAVSGA  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV
Sbjct: 1   MATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV 60

Query: 61  TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAPE 120
           TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATA PE
Sbjct: 61  TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPE 120

Query: 121 PAAVAVAAAAATEEKKAEESKEEQ 143
              V   AAA  EEKKAEE+KEEQ
Sbjct: 121 --TVVAVAAAGEEEKKAEENKEEQ 142

[Close]

BLAST of Spg003648 vs. NCBI nr
Match: XP_038877259.1 (uncharacterized protein At2g34160-like [Benincasa hispida])

HSP 1 Score: 223.4 bits (568), Expect = 1.2e-54
Identity = 132/143 (92.31%), Postives = 134/143 (93.71%), Query Frame = 0


Query: 1   MATIAVSG-AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 60
           MATIAVSG AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT
Sbjct: 1   MATIAVSGAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 60

Query: 61  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAPEP 120
           IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATA PE 
Sbjct: 61  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPEV 120

Query: 121 A-AVAVAAAAATEEKKAEESKEE 142
              VA  AAAA EEKKAEE+KE+
Sbjct: 121 VETVATGAAAAEEEKKAEENKEQ 143

[Close]

BLAST of Spg003648 vs. NCBI nr
Match: XP_022946134.1 (uncharacterized protein At2g34160-like isoform X1 [Cucurbita moschata] >KAG7030319.1 hypothetical protein SDJN02_08666 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221.1 bits (562), Expect = 6.2e-54
Identity = 133/158 (84.18%), Postives = 135/158 (85.44%), Query Frame = 0


Query: 1   MATIAVSG-----------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MAT+AVSG           AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120

Query: 121 MTAATAAPEPA-----AVAVAAAAATEEKKAEESKEEQ 143
           MTAAT  PEPA     A A+AA  A EEKK EESKEEQ
Sbjct: 121 MTAATTVPEPAVATATATAMAAPVAAEEKKEEESKEEQ 158

[Close]

BLAST of Spg003648 vs. NCBI nr
Match: XP_023521159.1 (uncharacterized protein At2g34160-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 218.0 bits (554), Expect = 5.2e-53
Identity = 134/165 (81.21%), Postives = 135/165 (81.82%), Query Frame = 0


Query: 1   MATIAVSG-----------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MAT+AVSG           AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120

Query: 121 MTAATAAPEPAA------------VAVAAAAATEEKKAEESKEEQ 143
           MTAATA PE AA             A AA AA EEKK EESKEEQ
Sbjct: 121 MTAATAVPEAAAATTAVVAATATVTATAAPAAAEEKKEEESKEEQ 165

[Close]

BLAST of Spg003648 vs. ExPASy Swiss-Prot
Match: O22969 (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.4e-37
Identity = 85/115 (73.91%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 10  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 69
           AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG 
Sbjct: 14  ATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGF 73

Query: 70  ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAPEPAAVAV 125
           A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD LM AA    E A   V
Sbjct: 74  AVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEEKEDAEAQV 128

[Close]

BLAST of Spg003648 vs. ExPASy TrEMBL
Match: A0A0A0LG69 (Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010240 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.7e-55
Identity = 133/143 (93.01%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 2   ATIAVSGA--ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 61
           ATIAVSGA  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT
Sbjct: 3   ATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 62

Query: 62  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAPEP 121
           IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATA PE 
Sbjct: 63  IAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPE- 122

Query: 122 AAVAVAAAAATEEKKAEESKEEQ 143
             V   AAAA EEKKAEESKEEQ
Sbjct: 123 -TVVAVAAAAEEEKKAEESKEEQ 143

[Close]

BLAST of Spg003648 vs. ExPASy TrEMBL
Match: A0A5D3D4G4 (Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001630 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.6e-55
Identity = 132/144 (91.67%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 1   MATIAVSGA--ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV 60
           MATIAVSGA  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV
Sbjct: 1   MATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV 60

Query: 61  TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAPE 120
           TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATA PE
Sbjct: 61  TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPE 120

Query: 121 PAAVAVAAAAATEEKKAEESKEEQ 143
              V   AAA  EEKKAEE+KEEQ
Sbjct: 121 --TVVAVAAAGEEEKKAEENKEEQ 142

[Close]

BLAST of Spg003648 vs. ExPASy TrEMBL
Match: A0A1S3C2U1 (uncharacterized protein At2g34160 OS=Cucumis melo OX=3656 GN=LOC103496224 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.6e-55
Identity = 132/144 (91.67%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 1   MATIAVSGA--ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV 60
           MATIAVSGA  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV
Sbjct: 1   MATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVV 60

Query: 61  TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAPE 120
           TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATA PE
Sbjct: 61  TIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPE 120

Query: 121 PAAVAVAAAAATEEKKAEESKEEQ 143
              V   AAA  EEKKAEE+KEEQ
Sbjct: 121 --TVVAVAAAGEEEKKAEENKEEQ 142

[Close]

BLAST of Spg003648 vs. ExPASy TrEMBL
Match: A0A6J1G2Y0 (uncharacterized protein At2g34160-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450305 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.0e-54
Identity = 133/158 (84.18%), Postives = 135/158 (85.44%), Query Frame = 0


Query: 1   MATIAVSG-----------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MAT+AVSG           AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120

Query: 121 MTAATAAPEPA-----AVAVAAAAATEEKKAEESKEEQ 143
           MTAAT  PEPA     A A+AA  A EEKK EESKEEQ
Sbjct: 121 MTAATTVPEPAVATATATAMAAPVAAEEKKEEESKEEQ 158

[Close]

BLAST of Spg003648 vs. ExPASy TrEMBL
Match: A0A6J1KEC8 (uncharacterized protein At2g34160 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493582 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.3e-52
Identity = 132/163 (80.98%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 1   MATIAVSG-----------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MAT+AVSG           AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPVAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120

Query: 121 MTAATAAPEPA----------AVAVAAAAATEEKKAEESKEEQ 143
           MTAAT  PE A          A   AA AA EEKK EESKEEQ
Sbjct: 121 MTAATVVPEAAVATTAVVAATATVTAAPAAAEEKKEEESKEEQ 163

[Close]

BLAST of Spg003648 vs. TAIR 10
Match: AT3G04620.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 176.0 bits (445), Expect = 2.1e-44
Identity = 100/128 (78.12%), Postives = 107/128 (83.59%), Query Frame = 0


Query: 9   AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNG 68
           A  ET KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI+EILKNNG
Sbjct: 30  ATVETHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTISEILKNNG 89

Query: 69  LATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAPEPAAVAVAAAA 128
           LATEKKVLTSTVGMKDE KG++VQKAKIEIVLGKS+KFDSL+   T    P   A A   
Sbjct: 90  LATEKKVLTSTVGMKDETKGKMVQKAKIEIVLGKSDKFDSLVPPVTNGKTPEEEASAETE 149

Query: 129 ATEEKKAE 137
           A+ E + E
Sbjct: 150 ASVEAQEE 157

[Close]

BLAST of Spg003648 vs. TAIR 10
Match: AT2G34160.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 157.1 bits (396), Expect = 1.0e-38
Identity = 85/115 (73.91%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 10  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 69
           AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG 
Sbjct: 14  ATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGF 73

Query: 70  ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAPEPAAVAV 125
           A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD LM AA    E A   V
Sbjct: 74  AVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEEKEDAEAQV 128

[Close]

BLAST of Spg003648 vs. TAIR 10
Match: AT1G29250.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.3e-38
Identity = 89/132 (67.42%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 10  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 69
           A +TQKKNRIQVSNTKKPLFFYVNLAKRY+QQ+ +VELSALGMAI TVVT+AEILKNNG 
Sbjct: 14  AVDTQKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIATVVTVAEILKNNGF 73

Query: 70  ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAPEPAAVAVAAAAA 129
           A EKK++TSTV +KD+++GR VQKAKIEI L KSEKFD LM                AAA
Sbjct: 74  AVEKKIMTSTVDIKDDSRGRPVQKAKIEITLAKSEKFDELM----------------AAA 129

Query: 130 TEEKKAEESKEE 142
            EEK+A E++E+
Sbjct: 134 NEEKEAAEAQEQ 129

The following BLAST results are available for this feature:

BLAST of Spg003648 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139384.1	5.6e-55	93.01	uncharacterized protein At2g34160 [Cucumis sativus]	[more]
XP_008456222.1	9.6e-55	91.67	PREDICTED: uncharacterized protein At2g34160 [Cucumis melo] >KAA0063590.1 alba D...	[more]
XP_038877259.1	1.2e-54	92.31	uncharacterized protein At2g34160-like [Benincasa hispida]	[more]
XP_022946134.1	6.2e-54	84.18	uncharacterized protein At2g34160-like isoform X1 [Cucurbita moschata] >KAG70303...	[more]
XP_023521159.1	5.2e-53	81.21	uncharacterized protein At2g34160-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg003648 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22969	1.4e-37	73.91	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 P...	[more]

BLAST of Spg003648 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG69	2.7e-55	93.01	Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010240 PE=4 S...	[more]
A0A5D3D4G4	4.6e-55	91.67	Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C2U1	4.6e-55	91.67	uncharacterized protein At2g34160 OS=Cucumis melo OX=3656 GN=LOC103496224 PE=4 S...	[more]
A0A6J1G2Y0	3.0e-54	84.18	uncharacterized protein At2g34160-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1KEC8	1.3e-52	80.98	uncharacterized protein At2g34160 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of Spg003648 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04620.1	2.1e-44	78.13	Alba DNA/RNA-binding protein	[more]
AT2G34160.1	1.0e-38	73.91	Alba DNA/RNA-binding protein	[more]
AT1G29250.1	1.3e-38	67.42	Alba DNA/RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 15..126 e-value: 2.4E-53 score: 180.9
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 16..111
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PIRSF	PIRSF030333	UCP030333_Alba	coord: 1..141 e-value: 1.8E-62 score: 207.7
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PANTHER	PTHR31947	DNA/RNA-BINDING PROTEIN ALBA 3	coord: 10..139
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 17..79 e-value: 3.0E-13 score: 49.4
None	No IPR available	PANTHER	PTHR31947:SF19	ALBA DNA/RNA-BINDING PROTEIN	coord: 10..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003648.1	Spg003648.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048235	pollen sperm cell differentiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding