Spg003619 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003619
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	HTH cro/C1-type domain-containing protein
Location	scaffold4: 48175340 .. 48175780 (+)
RNA-Seq Expression	Spg003619
Synteny	Spg003619

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGAGCCGATTCCCCGGAGCCATGGCTCAAGATTGGGAGCCAGTGGTGCTCCACAAGTCGAAGCACAAGGCTCAGGACCTTCGCGATCCGAAGGCCGTGAACCAGGCGATCCGATCGGGAATACCGGTCCAGACGGTGAAGAAGTTCGACGCCGGTTCGAACAAGAAAGCCGCGGCGGCGCCGGTGAAGAACGCGAGGAAGCTGGACGAAGGAACGGAGCCGGCGGCGCTGGAGCGGGTAGCGGCGGAGGTGAGGCAGGCGATTCAGAAGGCGCGGGTGGAGAAGAAGATGAGCCAAGCGGAACTCGCGAAGCAGATCAACGAGCGGATCCAGGTGGTGCAGGAGTACGAAAACGGGAAGGCGGTGCCGAATCAGGCCGTTTTGGCGAAGATGGAGAAGGTTTTGGGCGTGAAGCTTCGAGGCAAATCGGGCAAGTGA

mRNA sequence

ATGCCGAGCCGATTCCCCGGAGCCATGGCTCAAGATTGGGAGCCAGTGGTGCTCCACAAGTCGAAGCACAAGGCTCAGGACCTTCGCGATCCGAAGGCCGTGAACCAGGCGATCCGATCGGGAATACCGGTCCAGACGGTGAAGAAGTTCGACGCCGGTTCGAACAAGAAAGCCGCGGCGGCGCCGGTGAAGAACGCGAGGAAGCTGGACGAAGGAACGGAGCCGGCGGCGCTGGAGCGGGTAGCGGCGGAGGTGAGGCAGGCGATTCAGAAGGCGCGGGTGGAGAAGAAGATGAGCCAAGCGGAACTCGCGAAGCAGATCAACGAGCGGATCCAGGTGGTGCAGGAGTACGAAAACGGGAAGGCGGTGCCGAATCAGGCCGTTTTGGCGAAGATGGAGAAGGTTTTGGGCGTGAAGCTTCGAGGCAAATCGGGCAAGTGA

Coding sequence (CDS)

ATGCCGAGCCGATTCCCCGGAGCCATGGCTCAAGATTGGGAGCCAGTGGTGCTCCACAAGTCGAAGCACAAGGCTCAGGACCTTCGCGATCCGAAGGCCGTGAACCAGGCGATCCGATCGGGAATACCGGTCCAGACGGTGAAGAAGTTCGACGCCGGTTCGAACAAGAAAGCCGCGGCGGCGCCGGTGAAGAACGCGAGGAAGCTGGACGAAGGAACGGAGCCGGCGGCGCTGGAGCGGGTAGCGGCGGAGGTGAGGCAGGCGATTCAGAAGGCGCGGGTGGAGAAGAAGATGAGCCAAGCGGAACTCGCGAAGCAGATCAACGAGCGGATCCAGGTGGTGCAGGAGTACGAAAACGGGAAGGCGGTGCCGAATCAGGCCGTTTTGGCGAAGATGGAGAAGGTTTTGGGCGTGAAGCTTCGAGGCAAATCGGGCAAGTGA

Protein sequence

MPSRFPGAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNKKAAAAPVKNARKLDEGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGKSGK

Homology

[Close]

BLAST of Spg003619 vs. NCBI nr
Match: TYK10712.1 (multiprotein-bridging factor 1c [Cucumis melo var. makuwa])

HSP 1 Score: 242.7 bits (618), Expect = 2.0e-60
Identity = 132/146 (90.41%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MPSRFPGAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEPVVLHK+K KAQ LRDPKAVNQAIRSG PVQTVKKFDAG NKK AA
Sbjct: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 60

Query: 61  APVKNARKLDEGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYENG 120
           APV NARKLDEGTEPAAL+RV  EVRQAIQKARVEKKMSQAELAKQINER QVVQEYENG
Sbjct: 61  APV-NARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENG 120

Query: 121 KAVPNQAVLAKMEKVLGVKLRGKSGK 147
           KAVPNQAVLAKMEKVLGVKLRG+SGK
Sbjct: 121 KAVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of Spg003619 vs. NCBI nr
Match: XP_022965996.1 (multiprotein-bridging factor 1c [Cucurbita maxima] >XP_023537921.1 multiprotein-bridging factor 1c [Cucurbita pepo subsp. pepo])

HSP 1 Score: 242.3 bits (617), Expect = 2.7e-60
Identity = 132/146 (90.41%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MPSRFPGAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEPVVLHKSK KAQDLRDPKAVNQAIRSG PV TVKKFDAGSNKKA A
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 61  APVKNARKLDEGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYENG 120
           APV NARKL+EGTEPAAL+RV  EVR AIQKAR+EKKMSQAELAKQINER QVVQEYENG
Sbjct: 61  APV-NARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELAKQINERTQVVQEYENG 120

Query: 121 KAVPNQAVLAKMEKVLGVKLRGKSGK 147
           KAVPNQAVLAKMEKVLGVKLRGKSGK
Sbjct: 121 KAVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]

BLAST of Spg003619 vs. NCBI nr
Match: XP_008458302.1 (PREDICTED: multiprotein-bridging factor 1c [Cucumis melo])

HSP 1 Score: 242.3 bits (617), Expect = 2.7e-60
Identity = 132/146 (90.41%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MPSRFPGAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEPVVLHK+K KAQ LRDPKAVNQAIRSG PVQTVKKFDAG NKK AA
Sbjct: 68  MPSRFPGALSQDWEPVVLHKAKPKAQVLRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 127

Query: 61  APVKNARKLDEGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYENG 120
           APV NARKLDEGTEPAAL+RV  EVRQAIQKARVEKKMSQAELAKQINER QVVQEYENG
Sbjct: 128 APV-NARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENG 187

Query: 121 KAVPNQAVLAKMEKVLGVKLRGKSGK 147
           KAVPNQAVLAKMEKVLGVKLRG+SGK
Sbjct: 188 KAVPNQAVLAKMEKVLGVKLRGRSGK 212

[Close]

BLAST of Spg003619 vs. NCBI nr
Match: KAA0061560.1 (multiprotein-bridging factor 1c [Cucumis melo var. makuwa])

HSP 1 Score: 242.3 bits (617), Expect = 2.7e-60
Identity = 132/146 (90.41%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MPSRFPGAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEPVVLHK+K KAQ LRDPKAVNQAIRSG PVQTVKKFDAG NKK AA
Sbjct: 68  MPSRFPGALSQDWEPVVLHKAKPKAQVLRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 127

Query: 61  APVKNARKLDEGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYENG 120
           APV NARKLDEGTEPAAL+RV  EVRQAIQKARVEKKMSQAELAKQINER QVVQEYENG
Sbjct: 128 APV-NARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENG 187

Query: 121 KAVPNQAVLAKMEKVLGVKLRGKSGK 147
           KAVPNQAVLAKMEKVLGVKLRG+SGK
Sbjct: 188 KAVPNQAVLAKMEKVLGVKLRGRSGK 212

[Close]

BLAST of Spg003619 vs. NCBI nr
Match: XP_022937454.1 (multiprotein-bridging factor 1c [Cucurbita moschata] >KAG6586426.1 Multiprotein-bridging factor 1c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021281.1 Multiprotein-bridging factor 1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 240.7 bits (613), Expect = 7.7e-60
Identity = 131/146 (89.73%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MPSRFPGAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEPVVLHKSK KAQDLRDPKAVNQAIRSG PV TVKKFDAGSNKKA A
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 61  APVKNARKLDEGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYENG 120
           APV NARKL+EGTEPAAL+RV  EVR AIQKAR+EKKMSQAEL KQINER QVVQEYENG
Sbjct: 61  APV-NARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELGKQINERTQVVQEYENG 120

Query: 121 KAVPNQAVLAKMEKVLGVKLRGKSGK 147
           KAVPNQAVLAKMEKVLGVKLRGKSGK
Sbjct: 121 KAVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]

BLAST of Spg003619 vs. ExPASy Swiss-Prot
Match: Q9LV58 (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 6.4e-57
Identity = 119/148 (80.41%), Postives = 132/148 (89.19%), Query Frame = 0


Query: 1   MPSRFPGAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNK--KA 60
           MPSR+PGA+ QDWEPVVLHKSK K+QDLRDPKAVN A+R+G+ VQTVKKFDAGSNK  K+
Sbjct: 1   MPSRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKS 60

Query: 61  AAAPVKNARKLDEGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYE 120
            A PV N +KL+E TEPAA++RV AEVR  IQKAR+EKKMSQA+LAKQINER QVVQEYE
Sbjct: 61  TAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYE 120

Query: 121 NGKAVPNQAVLAKMEKVLGVKLRGKSGK 147
           NGKAVPNQAVLAKMEKVLGVKLRGK GK
Sbjct: 121 NGKAVPNQAVLAKMEKVLGVKLRGKIGK 148

[Close]

BLAST of Spg003619 vs. ExPASy Swiss-Prot
Match: Q9LXT3 (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.1e-32
Identity = 73/137 (53.28%), Postives = 101/137 (73.72%), Query Frame = 0


Query: 7   GAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNKKAAAAPVKNA 66
           G + QDWEPVV+ K    A   RD K VN A RSG  ++TV+KF+AGSNK A++    N 
Sbjct: 5   GPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNT 64

Query: 67  RKLDEGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYENGKAVPNQ 126
           +KLD+ TE  + +RV  E+++AI +AR EKK++Q++LA  INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQ 124

Query: 127 AVLAKMEKVLGVKLRGK 144
            +L+K+E+ LG KLRGK
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of Spg003619 vs. ExPASy Swiss-Prot
Match: Q9SJI8 (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.7e-31
Identity = 71/137 (51.82%), Postives = 100/137 (72.99%), Query Frame = 0


Query: 7   GAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNKKAAAAPVKNA 66
           G + QDWEPVV+ K    A   RD K VN A RSG  ++TV+KF+AG+NK A++    N 
Sbjct: 5   GPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNT 64

Query: 67  RKLDEGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYENGKAVPNQ 126
           + LD+ TE    ERV  E+++AI +AR +KK++Q++LA+ INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQ 124

Query: 127 AVLAKMEKVLGVKLRGK 144
            +L+K+E+ LG KLRGK
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of Spg003619 vs. ExPASy Swiss-Prot
Match: Q6PBY3 (Endothelial differentiation-related factor 1 homolog OS=Danio rerio OX=7955 GN=edf1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.4e-19
Identity = 57/132 (43.18%), Postives = 82/132 (62.12%), Query Frame = 0


Query: 12  DWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNKKAAAAPVKNARKLDE 71
           DW+ V + + K  A   +  +AV  A R G  V+T KK+ AG NK+      KN  KLD 
Sbjct: 5   DWDTVTVLRKKGSAAQSKSKQAVTAAQRKGEAVETSKKWAAGQNKQHVV--TKNTAKLDR 64

Query: 72  GTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYENGKAVPNQAVLAK 131
            TE  + +RV  EV + IQ+ R  K ++Q +LA +INE+ Q++ EYE GKA+PN  V+ K
Sbjct: 65  ETEELSHQRVPLEVGKVIQQGRQNKGLTQKDLATKINEKPQIIAEYECGKAIPNNQVMGK 124

Query: 132 MEKVLGVKLRGK 144
           +E+ +G+KLRGK
Sbjct: 125 IERAIGLKLRGK 134

[Close]

BLAST of Spg003619 vs. ExPASy Swiss-Prot
Match: Q6GPQ6 (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 GN=edf1 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.4e-18
Identity = 59/133 (44.36%), Postives = 82/133 (61.65%), Query Frame = 0


Query: 12  DWEPV-VLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNKKAAAAPVKNARKLD 71
           DW+ V VL K    A   +  +A+  A R G  V+T KK+ AG NK+      +N  KLD
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAITAAQRRGEEVETSKKWSAGQNKQHTI--TRNTAKLD 64

Query: 72  EGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYENGKAVPNQAVLA 131
             TE    +RV  EV + IQ+ R  K M+Q +LA +INE+ QV+ +YE GKA+PN  V+ 
Sbjct: 65  RETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIPNNQVMG 124

Query: 132 KMEKVLGVKLRGK 144
           K+E+V+G+KLRGK
Sbjct: 125 KIERVIGLKLRGK 135

[Close]

BLAST of Spg003619 vs. ExPASy TrEMBL
Match: A0A5D3CHG2 (Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00210 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 9.8e-61
Identity = 132/146 (90.41%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MPSRFPGAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEPVVLHK+K KAQ LRDPKAVNQAIRSG PVQTVKKFDAG NKK AA
Sbjct: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 60

Query: 61  APVKNARKLDEGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYENG 120
           APV NARKLDEGTEPAAL+RV  EVRQAIQKARVEKKMSQAELAKQINER QVVQEYENG
Sbjct: 61  APV-NARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENG 120

Query: 121 KAVPNQAVLAKMEKVLGVKLRGKSGK 147
           KAVPNQAVLAKMEKVLGVKLRG+SGK
Sbjct: 121 KAVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of Spg003619 vs. ExPASy TrEMBL
Match: A0A6J1HN61 (multiprotein-bridging factor 1c OS=Cucurbita maxima OX=3661 GN=LOC111465714 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.3e-60
Identity = 132/146 (90.41%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MPSRFPGAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEPVVLHKSK KAQDLRDPKAVNQAIRSG PV TVKKFDAGSNKKA A
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 61  APVKNARKLDEGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYENG 120
           APV NARKL+EGTEPAAL+RV  EVR AIQKAR+EKKMSQAELAKQINER QVVQEYENG
Sbjct: 61  APV-NARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELAKQINERTQVVQEYENG 120

Query: 121 KAVPNQAVLAKMEKVLGVKLRGKSGK 147
           KAVPNQAVLAKMEKVLGVKLRGKSGK
Sbjct: 121 KAVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]

BLAST of Spg003619 vs. ExPASy TrEMBL
Match: A0A5A7V2S1 (Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001220 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.3e-60
Identity = 132/146 (90.41%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MPSRFPGAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEPVVLHK+K KAQ LRDPKAVNQAIRSG PVQTVKKFDAG NKK AA
Sbjct: 68  MPSRFPGALSQDWEPVVLHKAKPKAQVLRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 127

Query: 61  APVKNARKLDEGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYENG 120
           APV NARKLDEGTEPAAL+RV  EVRQAIQKARVEKKMSQAELAKQINER QVVQEYENG
Sbjct: 128 APV-NARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENG 187

Query: 121 KAVPNQAVLAKMEKVLGVKLRGKSGK 147
           KAVPNQAVLAKMEKVLGVKLRG+SGK
Sbjct: 188 KAVPNQAVLAKMEKVLGVKLRGRSGK 212

[Close]

BLAST of Spg003619 vs. ExPASy TrEMBL
Match: A0A1S3C8T1 (multiprotein-bridging factor 1c OS=Cucumis melo OX=3656 GN=LOC103497758 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.3e-60
Identity = 132/146 (90.41%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MPSRFPGAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEPVVLHK+K KAQ LRDPKAVNQAIRSG PVQTVKKFDAG NKK AA
Sbjct: 68  MPSRFPGALSQDWEPVVLHKAKPKAQVLRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 127

Query: 61  APVKNARKLDEGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYENG 120
           APV NARKLDEGTEPAAL+RV  EVRQAIQKARVEKKMSQAELAKQINER QVVQEYENG
Sbjct: 128 APV-NARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENG 187

Query: 121 KAVPNQAVLAKMEKVLGVKLRGKSGK 147
           KAVPNQAVLAKMEKVLGVKLRG+SGK
Sbjct: 188 KAVPNQAVLAKMEKVLGVKLRGRSGK 212

[Close]

BLAST of Spg003619 vs. ExPASy TrEMBL
Match: A0A6J1FB80 (multiprotein-bridging factor 1c OS=Cucurbita moschata OX=3662 GN=LOC111443860 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.7e-60
Identity = 131/146 (89.73%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MPSRFPGAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEPVVLHKSK KAQDLRDPKAVNQAIRSG PV TVKKFDAGSNKKA A
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 61  APVKNARKLDEGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYENG 120
           APV NARKL+EGTEPAAL+RV  EVR AIQKAR+EKKMSQAEL KQINER QVVQEYENG
Sbjct: 61  APV-NARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELGKQINERTQVVQEYENG 120

Query: 121 KAVPNQAVLAKMEKVLGVKLRGKSGK 147
           KAVPNQAVLAKMEKVLGVKLRGKSGK
Sbjct: 121 KAVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]

BLAST of Spg003619 vs. TAIR 10
Match: AT3G24500.1 (multiprotein bridging factor 1C )

HSP 1 Score: 221.5 bits (563), Expect = 4.5e-58
Identity = 119/148 (80.41%), Postives = 132/148 (89.19%), Query Frame = 0


Query: 1   MPSRFPGAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNK--KA 60
           MPSR+PGA+ QDWEPVVLHKSK K+QDLRDPKAVN A+R+G+ VQTVKKFDAGSNK  K+
Sbjct: 1   MPSRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKS 60

Query: 61  AAAPVKNARKLDEGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYE 120
            A PV N +KL+E TEPAA++RV AEVR  IQKAR+EKKMSQA+LAKQINER QVVQEYE
Sbjct: 61  TAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYE 120

Query: 121 NGKAVPNQAVLAKMEKVLGVKLRGKSGK 147
           NGKAVPNQAVLAKMEKVLGVKLRGK GK
Sbjct: 121 NGKAVPNQAVLAKMEKVLGVKLRGKIGK 148

[Close]

BLAST of Spg003619 vs. TAIR 10
Match: AT3G58680.1 (multiprotein bridging factor 1B )

HSP 1 Score: 138.3 bits (347), Expect = 5.0e-33
Identity = 73/137 (53.28%), Postives = 101/137 (73.72%), Query Frame = 0


Query: 7   GAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNKKAAAAPVKNA 66
           G + QDWEPVV+ K    A   RD K VN A RSG  ++TV+KF+AGSNK A++    N 
Sbjct: 5   GPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNT 64

Query: 67  RKLDEGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYENGKAVPNQ 126
           +KLD+ TE  + +RV  E+++AI +AR EKK++Q++LA  INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQ 124

Query: 127 AVLAKMEKVLGVKLRGK 144
            +L+K+E+ LG KLRGK
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of Spg003619 vs. TAIR 10
Match: AT2G42680.1 (multiprotein bridging factor 1A )

HSP 1 Score: 136.3 bits (342), Expect = 1.9e-32
Identity = 71/137 (51.82%), Postives = 100/137 (72.99%), Query Frame = 0


Query: 7   GAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNKKAAAAPVKNA 66
           G + QDWEPVV+ K    A   RD K VN A RSG  ++TV+KF+AG+NK A++    N 
Sbjct: 5   GPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNT 64

Query: 67  RKLDEGTEPAALERVAAEVRQAIQKARVEKKMSQAELAKQINERIQVVQEYENGKAVPNQ 126
           + LD+ TE    ERV  E+++AI +AR +KK++Q++LA+ INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQ 124

Query: 127 AVLAKMEKVLGVKLRGK 144
            +L+K+E+ LG KLRGK
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of Spg003619 vs. TAIR 10
Match: AT3G24500.2 (multiprotein bridging factor 1C )

HSP 1 Score: 129.0 bits (323), Expect = 3.0e-30
Identity = 66/95 (69.47%), Postives = 80/95 (84.21%), Query Frame = 0


Query: 1  MPSRFPGAMAQDWEPVVLHKSKHKAQDLRDPKAVNQAIRSGIPVQTVKKFDAGSNK--KA 60
          MPSR+PGA+ QDWEPVVLHKSK K+QDLRDPKAVN A+R+G+ VQTVKKFDAGSNK  K+
Sbjct: 1  MPSRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKS 60

Query: 61 AAAPVKNARKLDEGTEPAALERVAAEVRQAIQKAR 94
           A PV N +KL+E TEPAA++RV AEVR  +++ R
Sbjct: 61 TAVPVINTKKLEEETEPAAMDRVKAEVRLCLRRWR 95

The following BLAST results are available for this feature:

BLAST of Spg003619 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK10712.1	2.0e-60	90.41	multiprotein-bridging factor 1c [Cucumis melo var. makuwa]	[more]
XP_022965996.1	2.7e-60	90.41	multiprotein-bridging factor 1c [Cucurbita maxima] >XP_023537921.1 multiprotein-...	[more]
XP_008458302.1	2.7e-60	90.41	PREDICTED: multiprotein-bridging factor 1c [Cucumis melo]	[more]
KAA0061560.1	2.7e-60	90.41	multiprotein-bridging factor 1c [Cucumis melo var. makuwa]	[more]
XP_022937454.1	7.7e-60	89.73	multiprotein-bridging factor 1c [Cucurbita moschata] >KAG6586426.1 Multiprotein-...	[more]

BLAST of Spg003619 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LV58	6.4e-57	80.41	Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV...	[more]
Q9LXT3	7.1e-32	53.28	Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV...	[more]
Q9SJI8	2.7e-31	51.82	Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV...	[more]
Q6PBY3	2.4e-19	43.18	Endothelial differentiation-related factor 1 homolog OS=Danio rerio OX=7955 GN=e...	[more]
Q6GPQ6	3.4e-18	44.36	Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 G...	[more]

BLAST of Spg003619 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CHG2	9.8e-61	90.41	Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1HN61	1.3e-60	90.41	multiprotein-bridging factor 1c OS=Cucurbita maxima OX=3661 GN=LOC111465714 PE=4...	[more]
A0A5A7V2S1	1.3e-60	90.41	Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S3C8T1	1.3e-60	90.41	multiprotein-bridging factor 1c OS=Cucumis melo OX=3656 GN=LOC103497758 PE=4 SV=...	[more]
A0A6J1FB80	3.7e-60	89.73	multiprotein-bridging factor 1c OS=Cucurbita moschata OX=3662 GN=LOC111443860 PE...	[more]

BLAST of Spg003619 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24500.1	4.5e-58	80.41	multiprotein bridging factor 1C	[more]
AT3G58680.1	5.0e-33	53.28	multiprotein bridging factor 1B	[more]
AT2G42680.1	1.9e-32	51.82	multiprotein bridging factor 1A	[more]
AT3G24500.2	3.0e-30	69.47	multiprotein bridging factor 1C	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 82..109
None	No IPR available	PANTHER	PTHR10245	ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1	coord: 1..145
None	No IPR available	PANTHER	PTHR10245:SF71	MULTIPROTEIN-BRIDGING FACTOR 1C	coord: 1..145
IPR001387	Cro/C1-type helix-turn-helix domain	SMART	SM00530	mbf_short4	coord: 88..143 e-value: 3.8E-13 score: 59.7
IPR001387	Cro/C1-type helix-turn-helix domain	PFAM	PF01381	HTH_3	coord: 89..140 e-value: 3.8E-13 score: 49.3
IPR001387	Cro/C1-type helix-turn-helix domain	PROSITE	PS50943	HTH_CROC1	coord: 89..143 score: 13.637897
IPR001387	Cro/C1-type helix-turn-helix domain	CDD	cd00093	HTH_XRE	coord: 87..140 e-value: 2.9269E-11 score: 53.3258
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	GENE3D	1.10.260.40		coord: 72..146 e-value: 2.5E-28 score: 99.4
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	SUPERFAMILY	47413	lambda repressor-like DNA-binding domains	coord: 84..140
IPR013729	Multiprotein bridging factor 1, N-terminal	PFAM	PF08523	MBF1	coord: 11..81 e-value: 5.4E-21 score: 74.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003619.1	Spg003619.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009408	response to heat
biological_process	GO:0009414	response to water deprivation
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003713	transcription coactivator activity