Spg003466 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg003466
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMuDRA-like transposase
Locationscaffold4: 49409811 .. 49414712 (-)
RNA-Seq ExpressionSpg003466
SyntenySpg003466
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGGGCGGGATCCCTTTGTTCAAGCCCCGGAGTCAGCACTTAAGGGAACAACCTCTCTACTATCCCTTATTCGGGTAGGAGTGAATTCCTTCTTGCACGACTATGTCCCCAGCTATCTACCCGTTCCTATCCCTGAAATGGGAGGCTTATTGAGTCGGCGATACCGAGCCACTCTCACCTATGCAGATCTAAGGATAAGCCCGAATAAACAGGAGTTCATAGTTAGCTCAGGATTAAGATCGAGTTACCTAGGTCATCATATGAAATAGTCAGTCTCGTCAGTAAACGGTGTTATAAAGAGAGAGTGACTTATTTCTTGGTCCTGGTCTTATGCAAACTCATTGCATAGGACGCCCCCACTCGCATGTCTCTACATGGACGATTTAGGATCACATCGTCTATACCATCTATAAAGTGGGCCGCGTCTCATAGTGTCCCCAGAATAAGGTACCCAACCCTATCCCTATACTATAGACCGTTTTGGCTATTACTCAAGCTTGATCCACTTTTATGTCTCTACATAAAGCTCAAGTGTTCATCCTATAGCCATGGATCTTAGTTTATTGGATTTGAGTTATTATATGTGCAATTTACTTTATTCAGTAATAACTTTACTGAATTAATCTCGATAACGCCTTTATCGAATAAGTATATAATTCGTTTAACATTCACTATCTACGAGTTTTAGGACACCAATCCCAACAGATGTACGACGACGACCAATTTAACATATTAGATTTACGATTTTCAGATTTAGAATTTAGAGGTTAATGTTTGTGGGTTTATGTCTAAAGGTATCTTGATGATGATGATGATGATGATGATCGATGACAACGACTAGTTTAGCGTTATGGATTTACGTTTAGGGTTTGGTGTATTGGGTTTAGGGTTTGGTGTATTGGGGTTAGGGTTTAGTGGTTAGGGGATACGGTTCTCAGGTTTAGTGAAAGCATTTTCGATTCAGTGTTTTTTTCTTTTGGGAAAAATACACTTTTGGTCCCTGAGATTTGGGTTAGGTTTCATTTTGGTCCCTGAGTTTTCAAACTCAACATTTTTACCCCTAAGGTTTGGATTTCGTTACAATCTTGGTGAAATTTTCTGTTAATACTAACAGATTGATGATGTGGCATACACATTTTTTTATTAAAAAATATTTTTTTGAATTTTCTTAATAAAATAAAATATTAAATATTTTTTTCTTTTTCTTTTTCTTTTTTTTGTTTCCTTTTTTCTTTTTTCTCTTTTCCATTTTCTTTTCCCTCTTCTCCCTTTTCTTTTCCCTCTTCTTCTTCCAACCACTGTCACTGTCACCGACCACTGTATCCGCCCGTTGTCGTTGCCCTCCGTTGCCGGCCGTCCGCCAACATTTTTTTTCTTCCTTTTTTCCTTCTTCTACTCTTCTTCCCCTTCGTTTTCCCTTTTTTCTTTATGTTTTTTATTTAAAAAAATGAAGAACTAAAACTCAGATCTAGAACGAGCCCATATCTGAGCTCGTTCCAGCCCCCTTCATTTAAAAAAAAAAACACAACGAAGCAGAGCGATTCGGGTTCACGCAACGGAACGGAAGATAGAGAGTTTCAGAACTGCACGGTGGTTGTTCAACGATGCGATTTATTTATAATTCGTTGTAGTGATTTGTATAGTTTAATTGGGTGGGGTTTTAGTTCTGTGTCAGTAGTTTTGGTAAATTGTTTTAGGAGAATAGATTTGGGACTAAGGCCACGTTTGGGAATGATTTTAAAAGTAGTAATTTTAGGGGAAATTGTCAAAATTGACCCTTTTAAGTTTTGGGTTTTCAAAATTGACACACTTCCTAAAAACTTGTTTTTTTAACCCATTTTATATAAATTTGGATACTTTTTGGTGGGACCCACTAGGTAAAAAGTCTTTATTACCCTTCTTCAATTTTGATTAATAATGGTTATTAAATTGTCAACTAACCTCTCAACCAACTAATTCCAACAATTAAAACAAAATTCAAACATGAAAACATAATTTACCATTTGACCAACAACATACTCTAGAGAAAAGAAAAAAGGTCAAACACGTGAAGTCAAAATCCGGGTATTGTCAACGCTTTTTTAAAGAAGGTATGTAGATTACATGTTTTAAATCATAAGTAGGTTTTTTAAGAGTTTTATTCGAAAATCTGGAAAAAAAAAATTTGAATGTTGACCGGGAAATGATGAATCCCGACCGGGATTTCTTGGTCAAACGACCGGGATTTCCTGGTCGGGAAATCCACCAGGAAATTTTCCAGATTTTGTTTTTTCCTTTATTCCTTTGATTTTTCTTTCCTTCTTTTACAAAAGTTGTTTTTTTCTAATGAATCTTGTATATATATATATATCTTGCAGAATGCCTCGAATCTTTGTGTGTTACGGTGGTGTATGGAAGGAGAATGAAAGAGATTATGAGGGTGGCTATTTAGCAGGATTGGATGTGAATATTGACATAAGGTATGAAGAGTTTTTAAGAGAGCTGTATAACGTGAGTGGCATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAAATGATAGAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCTAAATTGCCGTTATACTTATCAATGATTTCGAAAGATGTCCATGGTAGTGGCAGTAACTTAGGTAGTCATAGCCATATACCACACACTCTCTCACAACCTTTTCCACAACCGCCACCATCATTTGCACAAACTGTACCCTACAATTTGGCCGAAAACATACCATCATCCATTCCCTCGTATCATCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTCCCACTAGACTTAGCCGATGATAATACACCAAATTTTGGGATTGAAGAGAATTTGTATACTGGTGACGATACACTTAATTACGAGGAACAAGAGTATGATGAAGAGGAAGATGAAAATTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAAGAAGAATCTGAAGCAGATGAATTTGAGGAAGTAGATGGAGTTGAGGCAGATGGTGGGACAGATGGAGGCAACGAAGTTGAGGAAGATGTTACTCCTCTTGCTTCTAGAATGGAAGGTGCTTCTAGCCAACAATTGATCACATCAGGTCAGTGTTCATATTCTACTGGTGATGTTGAACTTGGACAACTATATGATTGTAAAGAAGAATTGAAAACGAGGTTGTCTGTAATGGCCATGAAGAAAAATTTTGAGTTTAGGGTTAAGAAATCCACGAAGTCTTTGTTTGTGGTGAAATGTATAATCGAATCTTGCAAATGGAAAGTTAGAGCTATAAAACCGAAGGGTTATGACGTATTCAAGATTTCGAAATATTATAATGTCCATACATGCTCCCATGAATTACTAAATCACCACCATAGACAAGCGAAGAGTCGGGTGGTAGGGCATTTGATTAAGTCGAAATTTGAGGATGTAAGACGAATTTACAAGCCGAATGACATTATACAGGACATGCGAAAAAGACTACGGGGTCACTATTAGTTATGAGAAAGCATGGCGAGCTAGAGAGGAGGCACTAGCTTTTGTTAGAGGATCACCAGAAGAGTCATTTGGTCACTTACATACATATGGTGAAGCGCTGAAGATCGTGAACCCTGGGACCGTATATGATATAAAGCTCGAGGATGGAAAGTATTTTAAATATGTGTTCATGGCACTAGGTCAGTGCATTAGGGGGTTTATTCAATACATTAGGCCAGTCATTATAGTTGATGGCGCGCACCTAAAGGGGAAGTTCGGAGGTTGGCTTCTAATTGCGGCTGGAGTGGATGGAAACAATCAAATATACCCCATTGCATTTGGAGTTGTTGATGGTGAGACAGATGATGCGTGGCAGTGGTTCTTTGAGAGAGTTAAACGTTCTATTGGAGATCCCACTGGATTGGTTATAGTATCAGATCGAAAGTCCAGTATTGGCAAGGCAATTAGAACAGTGTATCCATCTGCATTTCATTGTTTTTGCATACACCATTTATCTATGAACCTCATGAAGAATTTTAAGTGCGAAGGTGCAATACCTATCTTTTTTTCTTGCTGCTAAAGCATGTCGAGAGTCGGAGTTTCAAAACATGTTTGCTAAACTTCGTCCATTCAGTGGTGTTGCTAAGTACTTGGAAGAATTGGGTTTCCCACGTTGGGCTCGGGCTTTTCAGTGTGGACGAAGATACAATCAGATGACAACTAATGTGGCCGAAAGTATGAATGCAACATTGGTACATGCTCGAACCTTACCTGTGACGAAGATGTTGGACAATATACGAGGCATGCTTCAAAGTTGGTTTTATAAGCGTCGGACACATGCCTCTAACCGATCTTCGAGGTTATCAGAGTACGCAGAGAACCTATTGATGGAGGCCGAGAAGAAGTCTCGAAGGCATAATGTGGACCCGATTGATTGCTACCAATATCAAGTATACGAAGGGCAATTAGACTTTCGTGTCGACTTGCACCTGAGGACGTGCACTTGTCGAGAGTTTGAGTACTACGAGATTCCATGCTCTCATGCAATCGCCGCAGCCCGAGACCGTAATGTTAATGTGGCCATTCTTTGTTCCCCCGCATATCACACAGAATCTATGATCCTATCATACGCAGAACCGATATATCCTGTTGGCCCTATGTCTGAGTGGAAGAGACCCGCTGAATTTCAAGAGATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAAATACAACAAGTTCATAAGTGCGGTCGATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA

mRNA sequence

ATGAGAGGGCGGGATCCCTTTGTTCAAGCCCCGGAGTCAGCACTTAAGGGAACAACCTCTCTACTATCCCTTATTCGGGTAGGAGTGAATTCCTTCTTGCACGACTATGTCCCCAGCTATCTACCCGTTCCTATCCCTGAAATGGGAGGCTTATTGAGTCGGCGATACCGAGCCACTCTCACCTATGCAGATCTAAGGATAAGCCCGAATAAACAGGAGTTCATAGACGCCCCCACTCGCATGTCTCTACATGGACGATTTAGGATCACATCGTCTATACCATCTATAAAGTGGGCCGCGTCTCATAGTGTCCCCAGAATAAGAATGCCTCGAATCTTTGTGTGTTACGGTGGTGTATGGAAGGAGAATGAAAGAGATTATGAGGGTGGCTATTTAGCAGGATTGGATGTGAATATTGACATAAGGTATGAAGAGTTTTTAAGAGAGCTGTATAACGTGAGTGGCATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAAATGATAGAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCTAAATTGCCGTTATACTTATCAATGATTTCGAAAGATGTCCATGGTAGTGGCAGTAACTTAGGTAGTCATAGCCATATACCACACACTCTCTCACAACCTTTTCCACAACCGCCACCATCATTTGCACAAACTGTACCCTACAATTTGGCCGAAAACATACCATCATCCATTCCCTCGTATCATCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTCCCACTAGACTTAGCCGATGATAATACACCAAATTTTGGGATTGAAGAGAATTTGTATACTGGTGACGATACACTTAATTACGAGGAACAAGAGTATGATGAAGAGGAAGATGAAAATTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAAGAAGAATCTGAAGCAGATGAATTTGAGGAAGTAGATGGAGTTGAGGCAGATGAACCGATATATCCTGTTGGCCCTATGTCTGAGTGGAAGAGACCCGCTGAATTTCAAGAGATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAAATACAACAAGTTCATAAGTGCGGTCGATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA

Coding sequence (CDS)

ATGAGAGGGCGGGATCCCTTTGTTCAAGCCCCGGAGTCAGCACTTAAGGGAACAACCTCTCTACTATCCCTTATTCGGGTAGGAGTGAATTCCTTCTTGCACGACTATGTCCCCAGCTATCTACCCGTTCCTATCCCTGAAATGGGAGGCTTATTGAGTCGGCGATACCGAGCCACTCTCACCTATGCAGATCTAAGGATAAGCCCGAATAAACAGGAGTTCATAGACGCCCCCACTCGCATGTCTCTACATGGACGATTTAGGATCACATCGTCTATACCATCTATAAAGTGGGCCGCGTCTCATAGTGTCCCCAGAATAAGAATGCCTCGAATCTTTGTGTGTTACGGTGGTGTATGGAAGGAGAATGAAAGAGATTATGAGGGTGGCTATTTAGCAGGATTGGATGTGAATATTGACATAAGGTATGAAGAGTTTTTAAGAGAGCTGTATAACGTGAGTGGCATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAAATGATAGAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCTAAATTGCCGTTATACTTATCAATGATTTCGAAAGATGTCCATGGTAGTGGCAGTAACTTAGGTAGTCATAGCCATATACCACACACTCTCTCACAACCTTTTCCACAACCGCCACCATCATTTGCACAAACTGTACCCTACAATTTGGCCGAAAACATACCATCATCCATTCCCTCGTATCATCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTCCCACTAGACTTAGCCGATGATAATACACCAAATTTTGGGATTGAAGAGAATTTGTATACTGGTGACGATACACTTAATTACGAGGAACAAGAGTATGATGAAGAGGAAGATGAAAATTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAAGAAGAATCTGAAGCAGATGAATTTGAGGAAGTAGATGGAGTTGAGGCAGATGAACCGATATATCCTGTTGGCCCTATGTCTGAGTGGAAGAGACCCGCTGAATTTCAAGAGATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAAATACAACAAGTTCATAAGTGCGGTCGATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA

Protein sequence

MRGRDPFVQAPESALKGTTSLLSLIRVGVNSFLHDYVPSYLPVPIPEMGGLLSRRYRATLTYADLRISPNKQEFIDAPTRMSLHGRFRITSSIPSIKWAASHSVPRIRMPRIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYNFGSRVPTYLIRNDRELRFFLSGEDASKLPLYLSMISKDVHGSGSNLGSHSHIPHTLSQPFPQPPPSFAQTVPYNLAENIPSSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFGIEENLYTGDDTLNYEEQEYDEEEDENWEYNEEDEELDESYEEESEADEFEEVDGVEADEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT
Homology
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BLAST of Spg003466 vs. NCBI nr
Match: XP_022156834.1 (uncharacterized protein LOC111023667 [Momordica charantia])

HSP 1 Score: 120.9 bits (302), Expect = 2.6e-23
Identity = 97/256 (37.89%), Postives = 137/256 (53.52%), Query Frame = 0 

Query: 104 VPRIRMPRIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDL 163
           VP + M R+FV YGG W E    YEGG + GLDV+  I Y   +  L+ ++ I+PDQFDL
Sbjct: 16  VPPLVMRRLFVIYGGKWNEAGTMYEGGVMGGLDVDETITYANLVSALHMLTRIDPDQFDL 75

Query: 164 IIRCLYNFGSR--VPTYLIRNDRELRFFLSG-EDASKLPLYLSMISKDVHGSGSNLGSHS 223
           I++C+Y F  R  VP YLI +D  L+F+L+G  D S++PLY+++I K  +GSGS  G++ 
Sbjct: 76  IVQCVYRFDFRYEVPNYLIFDDSSLKFYLNGPPDPSQVPLYVTVIPKASYGSGSRRGNNF 135

Query: 224 HIPHTLSQPFPQPP----PSFAQTVPYNLA---ENIPSSIPSYHPTYDNVSSPTPISNTF 283
               T S  FP  P    P F +T+  +       +PS IP   P  DNV          
Sbjct: 136 FETQT-SSSFPYYPRQNDPCFGRTISIDSPLDDVGLPSFIPQITPLADNV---------- 195

Query: 284 VPLDLADDNTPNFG-IEEN----LYTGDDTLNYEEQE------------YDEEEDENWEY 333
           +P +L DD +P +G + EN     +  DD  +Y+E              YD  E++  EY
Sbjct: 196 IPCNLDDDESPYYGQLYENEVEYKFQSDDEYDYDEYRTEDGVEGDGGNGYDNGEED--EY 255

[Close]
BLAST of Spg003466 vs. NCBI nr
Match: KAA0050460.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 103.6 bits (257), Expect = 4.2e-18
Identity = 107/368 (29.08%), Postives = 156/368 (42.39%), Query Frame = 0 

Query: 111 RIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYN 170
           RI V YG  W E  R YEG  L G+ V+ +I +++   ELY+++ ++P +FD+ IRC+Y 
Sbjct: 5   RILVRYGSAWDEGRRKYEGEVLKGIVVSKEITHKDLHDELYDLAEVDPTKFDIKIRCIYE 64

Query: 171 F--GSRVPTYLIRNDRELRFFLSGEDASKLPLYLS----------MISKDVHGSG----- 230
                  P + + ND +L+F++  E+  ++PLYLS          +++KD +        
Sbjct: 65  IKREKEAPPFELSNDCDLKFYILSENPLEVPLYLSFEPTNNQSKKLLNKDYNSVSRSNQV 124

Query: 231 SNLGSHSHI-PHTL----------------SQPFPQPPPSFAQT--------VPYNLAEN 290
            NL SH  I   TL                ++ F  P    A T        V Y+ ++ 
Sbjct: 125 QNLNSHPSIGMDTLHGNEVDISELQSVEMNNELFDIPQQRDAPTKDCKGKGKVDYSFSKE 184

Query: 291 IPSSIPSYHPTYDNVSSPTPISNTFVPLDLADDN------------TPNFGIEENLYTGD 350
           +  S  +               NT     + D                 F     LY   
Sbjct: 185 VVGSKKALKFVVKKFIKEVLFVNTSTTSVVGDCERKAKSWVVGELIKSKFKGASRLYKPR 244

Query: 351 DTLNYEEQEYD--EEEDENWEYNEEDEE--LDESYEEESEADEFEEVDGVEADEPIYPVG 410
           D +    Q+YD     ++ W   E   E  L    E  +    + E       E IY VG
Sbjct: 245 DIIEDMRQDYDINMSYEKAWRARENAYERVLGSPEESYNLLRRYGEALKFTNPEVIYLVG 304

Query: 411 PMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKT 421
             S+WK   ++  M +LPPK V RVGR +  RI S GE P++   HKC RC  IGHNR T
Sbjct: 305 NQSDWKTSEDYIRMTVLPPKVVKRVGRSKKKRISSIGEAPKL---HKCSRCKQIGHNRLT 364

[Close]
BLAST of Spg003466 vs. NCBI nr
Match: XP_022156830.1 (uncharacterized protein LOC111023664 [Momordica charantia])

HSP 1 Score: 98.2 bits (243), Expect = 1.8e-16
Identity = 44/74 (59.46%), Postives = 57/74 (77.03%), Query Frame = 0 

Query: 346 EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGN 405
           EP+YP+G   +W  P +F +  + PP+ V+RVGRR+T+RIPSAGE    +QVHKCG CGN
Sbjct: 141 EPVYPLGDKDDWILPDDFVDRIVEPPRYVSRVGRRQTIRIPSAGE---TRQVHKCGWCGN 200

Query: 406 IGHNRKTCREPLST 420
           +GHNRKTCR+PL T
Sbjct: 201 MGHNRKTCRQPLRT 211

[Close]
BLAST of Spg003466 vs. NCBI nr
Match: XP_022153143.1 (uncharacterized protein LOC111020711 [Momordica charantia])

HSP 1 Score: 98.2 bits (243), Expect = 1.8e-16
Identity = 46/75 (61.33%), Postives = 54/75 (72.00%), Query Frame = 0 

Query: 346 EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGN 405
           EP+YP G   +W  P  F E ++ PPK V RVGR +TVRIPS GE    +QVHKC RCGN
Sbjct: 124 EPVYPPGDEVDWILPDNFVEFKVEPPKYVKRVGRNQTVRIPSVGE---TRQVHKCNRCGN 183

Query: 406 IGHNRKTCREPLSTT 421
           +GHNRKTCR+PL TT
Sbjct: 184 MGHNRKTCRQPLRTT 195

[Close]
BLAST of Spg003466 vs. NCBI nr
Match: XP_022157875.1 (uncharacterized protein LOC111024486 [Momordica charantia])

HSP 1 Score: 97.1 bits (240), Expect = 4.0e-16
Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 0 

Query: 346 EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGN 405
           EP+YP+G   +W    ++    I PPK V RVGRR+T RIPSAGE   ++QVHKCGRCGN
Sbjct: 327 EPVYPLGDEKDWILLDDYVPKMIKPPKFVPRVGRRQTTRIPSAGE---VRQVHKCGRCGN 386

Query: 406 IGHNRKTCREPLST 420
           +GHNRKTCR+PL T
Sbjct: 387 VGHNRKTCRQPLRT 397

[Close]
BLAST of Spg003466 vs. ExPASy TrEMBL
Match: A0A6J1DUS4 (uncharacterized protein LOC111023667 OS=Momordica charantia OX=3673 GN=LOC111023667 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-23
Identity = 97/256 (37.89%), Postives = 137/256 (53.52%), Query Frame = 0 

Query: 104 VPRIRMPRIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDL 163
           VP + M R+FV YGG W E    YEGG + GLDV+  I Y   +  L+ ++ I+PDQFDL
Sbjct: 16  VPPLVMRRLFVIYGGKWNEAGTMYEGGVMGGLDVDETITYANLVSALHMLTRIDPDQFDL 75

Query: 164 IIRCLYNFGSR--VPTYLIRNDRELRFFLSG-EDASKLPLYLSMISKDVHGSGSNLGSHS 223
           I++C+Y F  R  VP YLI +D  L+F+L+G  D S++PLY+++I K  +GSGS  G++ 
Sbjct: 76  IVQCVYRFDFRYEVPNYLIFDDSSLKFYLNGPPDPSQVPLYVTVIPKASYGSGSRRGNNF 135

Query: 224 HIPHTLSQPFPQPP----PSFAQTVPYNLA---ENIPSSIPSYHPTYDNVSSPTPISNTF 283
               T S  FP  P    P F +T+  +       +PS IP   P  DNV          
Sbjct: 136 FETQT-SSSFPYYPRQNDPCFGRTISIDSPLDDVGLPSFIPQITPLADNV---------- 195

Query: 284 VPLDLADDNTPNFG-IEEN----LYTGDDTLNYEEQE------------YDEEEDENWEY 333
           +P +L DD +P +G + EN     +  DD  +Y+E              YD  E++  EY
Sbjct: 196 IPCNLDDDESPYYGQLYENEVEYKFQSDDEYDYDEYRTEDGVEGDGGNGYDNGEED--EY 255

[Close]
BLAST of Spg003466 vs. ExPASy TrEMBL
Match: A0A5A7U5G9 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00730 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-18
Identity = 107/368 (29.08%), Postives = 156/368 (42.39%), Query Frame = 0 

Query: 111 RIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYN 170
           RI V YG  W E  R YEG  L G+ V+ +I +++   ELY+++ ++P +FD+ IRC+Y 
Sbjct: 5   RILVRYGSAWDEGRRKYEGEVLKGIVVSKEITHKDLHDELYDLAEVDPTKFDIKIRCIYE 64

Query: 171 F--GSRVPTYLIRNDRELRFFLSGEDASKLPLYLS----------MISKDVHGSG----- 230
                  P + + ND +L+F++  E+  ++PLYLS          +++KD +        
Sbjct: 65  IKREKEAPPFELSNDCDLKFYILSENPLEVPLYLSFEPTNNQSKKLLNKDYNSVSRSNQV 124

Query: 231 SNLGSHSHI-PHTL----------------SQPFPQPPPSFAQT--------VPYNLAEN 290
            NL SH  I   TL                ++ F  P    A T        V Y+ ++ 
Sbjct: 125 QNLNSHPSIGMDTLHGNEVDISELQSVEMNNELFDIPQQRDAPTKDCKGKGKVDYSFSKE 184

Query: 291 IPSSIPSYHPTYDNVSSPTPISNTFVPLDLADDN------------TPNFGIEENLYTGD 350
           +  S  +               NT     + D                 F     LY   
Sbjct: 185 VVGSKKALKFVVKKFIKEVLFVNTSTTSVVGDCERKAKSWVVGELIKSKFKGASRLYKPR 244

Query: 351 DTLNYEEQEYD--EEEDENWEYNEEDEE--LDESYEEESEADEFEEVDGVEADEPIYPVG 410
           D +    Q+YD     ++ W   E   E  L    E  +    + E       E IY VG
Sbjct: 245 DIIEDMRQDYDINMSYEKAWRARENAYERVLGSPEESYNLLRRYGEALKFTNPEVIYLVG 304

Query: 411 PMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKT 421
             S+WK   ++  M +LPPK V RVGR +  RI S GE P++   HKC RC  IGHNR T
Sbjct: 305 NQSDWKTSEDYIRMTVLPPKVVKRVGRSKKKRISSIGEAPKL---HKCSRCKQIGHNRLT 364

[Close]
BLAST of Spg003466 vs. ExPASy TrEMBL
Match: A0A6J1DRF6 (uncharacterized protein LOC111023664 OS=Momordica charantia OX=3673 GN=LOC111023664 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.6e-17
Identity = 44/74 (59.46%), Postives = 57/74 (77.03%), Query Frame = 0 

Query: 346 EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGN 405
           EP+YP+G   +W  P +F +  + PP+ V+RVGRR+T+RIPSAGE    +QVHKCG CGN
Sbjct: 141 EPVYPLGDKDDWILPDDFVDRIVEPPRYVSRVGRRQTIRIPSAGE---TRQVHKCGWCGN 200

Query: 406 IGHNRKTCREPLST 420
           +GHNRKTCR+PL T
Sbjct: 201 MGHNRKTCRQPLRT 211

[Close]
BLAST of Spg003466 vs. ExPASy TrEMBL
Match: A0A6J1DGQ6 (uncharacterized protein LOC111020711 OS=Momordica charantia OX=3673 GN=LOC111020711 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.6e-17
Identity = 46/75 (61.33%), Postives = 54/75 (72.00%), Query Frame = 0 

Query: 346 EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGN 405
           EP+YP G   +W  P  F E ++ PPK V RVGR +TVRIPS GE    +QVHKC RCGN
Sbjct: 124 EPVYPPGDEVDWILPDNFVEFKVEPPKYVKRVGRNQTVRIPSVGE---TRQVHKCNRCGN 183

Query: 406 IGHNRKTCREPLSTT 421
           +GHNRKTCR+PL TT
Sbjct: 184 MGHNRKTCRQPLRTT 195

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BLAST of Spg003466 vs. ExPASy TrEMBL
Match: A0A6J1DU86 (uncharacterized protein LOC111024486 OS=Momordica charantia OX=3673 GN=LOC111024486 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-16
Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 0 

Query: 346 EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGN 405
           EP+YP+G   +W    ++    I PPK V RVGRR+T RIPSAGE   ++QVHKCGRCGN
Sbjct: 327 EPVYPLGDEKDWILLDDYVPKMIKPPKFVPRVGRRQTTRIPSAGE---VRQVHKCGRCGN 386

Query: 406 IGHNRKTCREPLST 420
           +GHNRKTCR+PL T
Sbjct: 387 VGHNRKTCRQPLRT 397

The following BLAST results are available for this feature:
BLAST of Spg003466 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022156834.12.6e-2337.89uncharacterized protein LOC111023667 [Momordica charantia][more]
KAA0050460.14.2e-1829.08MuDRA-like transposase [Cucumis melo var. makuwa][more]
XP_022156830.11.8e-1659.46uncharacterized protein LOC111023664 [Momordica charantia][more]
XP_022153143.11.8e-1661.33uncharacterized protein LOC111020711 [Momordica charantia][more]
XP_022157875.14.0e-1660.81uncharacterized protein LOC111024486 [Momordica charantia][more]
BLAST of Spg003466 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg003466 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DUS41.2e-2337.89uncharacterized protein LOC111023667 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A5A7U5G92.1e-1829.08MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1... [more]
A0A6J1DRF68.6e-1759.46uncharacterized protein LOC111023664 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DGQ68.6e-1761.33uncharacterized protein LOC111020711 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1DU861.9e-1660.81uncharacterized protein LOC111024486 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
BLAST of Spg003466 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 299..326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..344
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..354
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 399..415
score: 8.614303

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg003466.1Spg003466.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding