Spg003461 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCAAAGCTCTTCCATACTCAGAACCGCCTCTTCCTCCGCCGTGCCGGAACTTAAGCTATCGGCGATTTCTTCTCTTCTTCTCCGATTTCCTCGTTTTTTATGGGCTTGCTTGACCAACTCTGGGACGACACCGTCGCCGGACCGCGGCCGGAAAGTGGCCTCGGCAAGCTTCGCAAACACTCGACGTTTTCCGGCCGACCTAGCTCCGGCAGCAAGGGTACGCTATGGCTTTCCTTATTCCACTGCTTGCCATGGCGGACACTTGATCTAATTCGATAAACGTCAACTCGAAACCCTAATTATAAGCATAATCACGGAATATTGAGTTTTCGATTTTATTTTTCTTGATTAAAAGTGGTTTAACCTGTAGGCCGCCGATCGAATGAGATTCTAATTTGTTGTTATAAATCTCTTAATAAGAAACCTACTGTTGATTTTGTTAAAGAAATAGCCGGCAGCTCAGATTTGTCTCGCAACTTGACCGGATCTGTACTTTTGAACTGAAAAAGATGCTCAATCGATACCTCGAACTCCATAGTTTCCATGTTGACTTTTCTTTTATTCTTGTTTTTTAATTAACTCTTTTTGGATCAGATCTCGATGGCGGCAGCGCGAGATCGTACGGCGACGATTCTTCAGAGTCGTCGGTGAGGATCACGAGGAGTATTATGATAGTAAGGCCTCCAGGGTACCAGAACGGTTCGCCTCCTATTTCACCGGCCGGATCCAATTCTCCGGCGTCGCCCTTTTCTGGTAAGTTACAGAGTCGTCCTTTTCCCCTTTTCTCTTTATTCGAAATGACCAATATGACCTTCATGTAGAATCCCAAAATTCCTTAATTGCTTAGATTTTTCTTTCCAATACAAGTTGGTAATAATTTACACGAGGGGGTGTTTTTTGTCCTTTGGTGATGGCGTCGCCTTCATGATTGGACAAGCTCAGGCCACAGTAGTTGTGTTTGGTAAAAAGATAATGTTCTAATTAAACCTGAATTCAGATTGTGGTTCCATTGGCAGCGCTTCTCAGCTTCTGTTTGTTGAAATTCGATGGCCATAGAATGGTTAATTCAATGACCCACCGTATTTATGGAGAATCATTTACAGCTTTCAGTTCAATCGTTTTCAATTCATTGCATGCTTCTCTTCTTTGTGGACATCATTTTAGATGTGGAAAATTGGACCATTTGTAACACTGTTCTTCTGTTCTCTGGTGTGGAAATTAGGTTGCCTTGTTTGTTGGTTGGGAGGTCTTGTCAAACTTAAGTTAAATATTTCGTGTGGATCTGCTTCTTTGTTATATAAAGTTGGATGAAGTAGGTGGAGAGTGGTGGTTGAAAACGTAGAGCTTACTTCATAAGCATGCATGTTGGTCAAACAAAAAATATGGCTCTTGTGAAGACATTATTGCAAACTTAATTAATGATCATTGTTACTCTGTTGCAAATATCCTTACCCCTAAGTTTTTGCTTTTATGGGTTGCATTTACTGTTACTAAAATTTCAAGTTGTGCTTAGCTCAACTTGTTAAAGTATATATCATCAATTTAGCTCAACCGGTTAAAGTATATAAAGTATATATCATCAATCAGGAGTTCAAAGATTTAAATCCTCCTCTCAACCTCCAACATGTTGTTGGACTAAAAAAATCATCTGGGAATTCATTAATGATTGAAATCTTTCTCTGTAATTTTGTTTTGCCTTCGGGTTTGATGTTTCAAACCTTGTTTTTAGTGACCCTTTTCTGTTGGCTCTTTCATCAATGCTTGTTTGCAGGAATATTTCTCTGATTGCCATACTTGTACAGATTGCTTACATGAAGTTGTGTACTCATTAGAAATAGAAACTGATTCAAATACTGATTGGTTTTCTGGATCTTCATGAAAATCTATCCTTCAGTACTTGTTTAGCTTCTTTCCATTTTATGTTTGTTTATAAGTAATTTCTCCCTTTTGGAGGTAGAGAGTCCTTCCGGTTTCGAAGAAGGTCGATCTCCGACGCATATACGAAGGCAACCGAAGGTGGACCCGGGAGCCCTTCTTCTCCTCACAACATGTGAGATGTAAGCTGAGCTCTCTTATTCCCTTGAAGAATGTGTCTTCAAAACGGTAACCTTCATAGATTTGTGTAATTTTTGTGTATTGTAATGCGGCTGTATCAGTATGCATGTGAATTGATCAGTATGAAGGGTGTTAGAATAAGTCTTGTAGGAAGGAATATCTTCATATAGGAAGCTAAAGCGAGGGAGATTATGGTAATTTTCAAATGTGTAGATGAGGGTACTATAGTAAATTTGGTATTAATGTAATATGTAAATATAGAAGAAGGGCATCATCTTGTTGTTTCATCTCCATCTGTCAAACTTGTCACTGTTGGTTTTGTTAGTGGAATGTAAAAGGGAAGTTCCTTTCATGTGGACCTGCTTGTGATTGATTGTCTCTCATTTTCAATTGGACAGTGCTTGCTAAATGCAAAACAGCACTGTTTTTCTTTTCTTTTTTTCTTTGGATGGTGACCACAAAGCACCAAATCTCAATTCTTTGGATAGATGCTTTTTGATCAGTGCCACTTTCAGGTTTTAATGCCATTCCATGAGTCATGAGTGTTTTGTAGTGATTTTGCTTTTTGGTTCTGTTATGCCTTGGATTTTAACCCAGATAAAGTTGGAAGAGTGGGGTTAGGACTTTAAACAAAATTTTGTGCTTTTTCTTTCTTTATTATTATTATTATTATTATTATTTTTTGTTTTTGCCCATCCCCTTGGATCTTACATTTGTTCTCTAGCTATTATAATGGTCATTATGTTTTATTCCAGATCTTTTAAATATTTATTTTAGTTTAAAATCTCTTCTTTTGTAAGTTCAACCATTATCTTTTAAATGATAATTATTATTTTATCCACTGAACTATGTTTAGATTGACACATCGATGTAGTTAAAGTTTAATGGATAATACATTATTATGTACGACATTATAGGTCGGTTTGGGATTAC ATGGGCTTGCTTGACCAACTCTGGGACGACACCGTCGCCGGACCGCGGCCGGAAAGTGGCCTCGGCAAGCTTCGCAAACACTCGACGTTTTCCGGCCGACCTAGCTCCGGCAGCAAGGATCTCGATGGCGGCAGCGCGAGATCGTACGGCGACGATTCTTCAGAGTCGTCGGTGAGGATCACGAGGAGTATTATGATAGTAAGGCCTCCAGGGTACCAGAACGGTTCGCCTCCTATTTCACCGGCCGGATCCAATTCTCCGGCGTCGCCCTTTTCTGGTAAGTTACAGAGTCATGTGGAAAATTGGACCATTTGTAACACTGTTCTTCTGTTCTCTGGTGTGGAAATTAGGTTGCCTTGTTTGTTGGTAGAGAGTCCTTCCGGTTTCGAAGAAGGTCGATCTCCGACGCATATACGAAGGCAACCGAAGGTGGACCCGGGAGCCCTTCTTCTCCTCACAACATGTGAGATGTAA ATGGGCTTGCTTGACCAACTCTGGGACGACACCGTCGCCGGACCGCGGCCGGAAAGTGGCCTCGGCAAGCTTCGCAAACACTCGACGTTTTCCGGCCGACCTAGCTCCGGCAGCAAGGATCTCGATGGCGGCAGCGCGAGATCGTACGGCGACGATTCTTCAGAGTCGTCGGTGAGGATCACGAGGAGTATTATGATAGTAAGGCCTCCAGGGTACCAGAACGGTTCGCCTCCTATTTCACCGGCCGGATCCAATTCTCCGGCGTCGCCCTTTTCTGGTAAGTTACAGAGTCATGTGGAAAATTGGACCATTTGTAACACTGTTCTTCTGTTCTCTGGTGTGGAAATTAGGTTGCCTTGTTTGTTGGTAGAGAGTCCTTCCGGTTTCGAAGAAGGTCGATCTCCGACGCATATACGAAGGCAACCGAAGGTGGACCCGGGAGCCCTTCTTCTCCTCACAACATGTGAGATGTAA MGLLDQLWDDTVAGPRPESGLGKLRKHSTFSGRPSSGSKDLDGGSARSYGDDSSESSVRITRSIMIVRPPGYQNGSPPISPAGSNSPASPFSGKLQSHVENWTICNTVLLFSGVEIRLPCLLVESPSGFEEGRSPTHIRRQPKVDPGALLLLTTCEM Homology
BLAST of Spg003461 vs. NCBI nr
Match: TYK13787.1 (dormancy-associated protein-like protein 3 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 217.6 bits (553), Expect = 7.5e-53 Identity = 113/157 (71.97%), Postives = 123/157 (78.34%), Query Frame = 0
BLAST of Spg003461 vs. NCBI nr
Match: XP_022966006.1 (dormancy-associated protein homolog 3 isoform X1 [Cucurbita maxima]) HSP 1 Score: 215.3 bits (547), Expect = 3.7e-52 Identity = 114/157 (72.61%), Postives = 122/157 (77.71%), Query Frame = 0
BLAST of Spg003461 vs. NCBI nr
Match: XP_023537708.1 (dormancy-associated protein homolog 3 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 215.3 bits (547), Expect = 3.7e-52 Identity = 113/157 (71.97%), Postives = 123/157 (78.34%), Query Frame = 0
BLAST of Spg003461 vs. NCBI nr
Match: XP_008454074.1 (PREDICTED: dormancy-associated protein homolog 3 isoform X1 [Cucumis melo]) HSP 1 Score: 214.9 bits (546), Expect = 4.9e-52 Identity = 113/157 (71.97%), Postives = 122/157 (77.71%), Query Frame = 0
BLAST of Spg003461 vs. NCBI nr
Match: XP_022937951.1 (dormancy-associated protein homolog 3 isoform X1 [Cucurbita moschata]) HSP 1 Score: 214.2 bits (544), Expect = 8.3e-52 Identity = 112/157 (71.34%), Postives = 123/157 (78.34%), Query Frame = 0
BLAST of Spg003461 vs. ExPASy Swiss-Prot
Match: Q8LD26 (Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g56220 PE=1 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.1e-30 Identity = 68/96 (70.83%), Postives = 77/96 (80.21%), Query Frame = 0
BLAST of Spg003461 vs. ExPASy Swiss-Prot
Match: F4HV65 (Dormancy-associated protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g54070 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.4e-06 Identity = 36/98 (36.73%), Postives = 49/98 (50.00%), Query Frame = 0
BLAST of Spg003461 vs. ExPASy Swiss-Prot
Match: Q05349 (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa OX=3747 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 5.1e-04 Identity = 20/26 (76.92%), Postives = 22/26 (84.62%), Query Frame = 0
BLAST of Spg003461 vs. ExPASy TrEMBL
Match: A0A5D3CPF9 (Dormancy-associated protein-like protein 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00490 PE=3 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 3.6e-53 Identity = 113/157 (71.97%), Postives = 123/157 (78.34%), Query Frame = 0
BLAST of Spg003461 vs. ExPASy TrEMBL
Match: A0A6J1HN70 (dormancy-associated protein homolog 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465724 PE=3 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 1.8e-52 Identity = 114/157 (72.61%), Postives = 122/157 (77.71%), Query Frame = 0
BLAST of Spg003461 vs. ExPASy TrEMBL
Match: A0A1S3BXW6 (dormancy-associated protein homolog 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494595 PE=3 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.4e-52 Identity = 113/157 (71.97%), Postives = 122/157 (77.71%), Query Frame = 0
BLAST of Spg003461 vs. ExPASy TrEMBL
Match: A0A6J1FBT2 (dormancy-associated protein homolog 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444188 PE=3 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 4.0e-52 Identity = 112/157 (71.34%), Postives = 123/157 (78.34%), Query Frame = 0
BLAST of Spg003461 vs. ExPASy TrEMBL
Match: A0A6J1DB48 (dormancy-associated protein homolog 3 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018856 PE=3 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.5e-46 Identity = 107/157 (68.15%), Postives = 114/157 (72.61%), Query Frame = 0
BLAST of Spg003461 vs. TAIR 10
Match: AT1G56220.3 (Dormancy/auxin associated family protein ) HSP 1 Score: 135.6 bits (340), Expect = 3.5e-32 Identity = 69/102 (67.65%), Postives = 78/102 (76.47%), Query Frame = 0
BLAST of Spg003461 vs. TAIR 10
Match: AT1G56220.1 (Dormancy/auxin associated family protein ) HSP 1 Score: 134.4 bits (337), Expect = 7.8e-32 Identity = 68/96 (70.83%), Postives = 77/96 (80.21%), Query Frame = 0
BLAST of Spg003461 vs. TAIR 10
Match: AT1G56220.2 (Dormancy/auxin associated family protein ) HSP 1 Score: 134.4 bits (337), Expect = 7.8e-32 Identity = 68/96 (70.83%), Postives = 77/96 (80.21%), Query Frame = 0
BLAST of Spg003461 vs. TAIR 10
Match: AT1G56220.4 (Dormancy/auxin associated family protein ) HSP 1 Score: 134.4 bits (337), Expect = 7.8e-32 Identity = 68/96 (70.83%), Postives = 77/96 (80.21%), Query Frame = 0
BLAST of Spg003461 vs. TAIR 10
Match: AT1G54070.1 (Dormancy/auxin associated family protein ) HSP 1 Score: 54.3 bits (129), Expect = 1.0e-07 Identity = 36/98 (36.73%), Postives = 49/98 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|