Spg003449 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTAGGCTCTGGAAATGGTATCAGAACTGTCTCACCTTCCATCCGGTGAAGACCCAGGTCATCAGTTCCGGCTTCATATGGGGCACCGGCGACATTGCAGCCCAATACATTACTCACTCCGCCGCCAAAAACCGTCTCCGAACTTCTGTGAGCATCAATTCCTTCATTTTCTTTTCGCTTTTACTGTAATTTTGATGGGGTTATCTTTCTTGATTCCTTCTTTGAGCTGGTGGGTTTCCCTTTGATTTTCTTTCCTTGATCGGAATTTTCTTGTTGACTTGAATTGCTCTCGTTCTTGCCCTGCTTTCTGTCTGATTTGGGATTGAGCGGTGAACTATTTCGTTTTCTTGTTCTTGTTATCAGAAGATGGGGCATTTGTCTTTTACCGTCGGTTTCGGTGATCTTTGTTTTGTAGAATCAATCGGCCAAAAGTTTAAGGGCTTCTTGCATGTGTATGTTGATTCTGTATCTTGATTGAATCTTCAGGTCAATGGTTTTCTGTTACCTTCACTGCAGTCTGAAGTCTTTTGATTAATGCAACTTGGGCTGTGCGATATCATTTTTTGTGTAAATGTAAAAGAAGGTTGAAGGATATTTGTTTTCAGTTTCTTTTTTTTTTTTGGGTCAAATTTTGAATGGTAAAATTTATGCGTACAATGTAGATTCTTCAAGTATTATAGACTTTAGGTGCGTTTGGTATTATAGGTTTTGGAATAGTGAAGTGTATTTAGTCATTTAAAGGCATTTTTCTCGTTCTTTATGATGTTGGTTAAATTCTCGAAAGCGATTTTGGATATTCTTAAAACACTTGGAAGCACGACCTTACTTGAACAGGATCTGTTCTATAGGTTGTACAACTAGCCAGTCTTCTTCGAAGCGTGTTTTGAATTGCTTCTAATCTTTTGGAAACTAATCTGTACTTCAGAAATCTCAGAACATGTGGCTGAATTAGGACTTGGATTGGATGTCATTGTATTCTCCTGCCCCTCCGAAGTGCATTGACTATTGCTATTTGTGGAACCTCTATGAGCTTAAGTTCTTGTAGTTCCATCAAATAACTGTTTCTCAATTGTCAATTTCCTTGTTAGTTCACAACCTATTTACCTACTCATAGTTCATGTTTGGCATGATAATCAATTTACTCTCAAATTTCAAACGTTGCTCTATGTCAGTGAACTGATATGATCCTTTTCTGACCTTACAATGGTGATGATATTTGTTTTTTCAAGTCACTTTGTTTGGTTATTCCAGTTCATTTTTGTGCACAAGATTGCAGTTTGCAGCTCTAGCTTTATAATCTGGTTTTGTTAATCAGTGAGATCACTTAATAGATCCTAAACCAGTCATCTATTTTTGGTTTTGTTTTCATATATTTGTTTTTCTCCTTTACTTCACTGTTATCGTCTTTGGTTTTGCTTTGAAGTTGTTGGTATGTGGTGCTCTTCCTTCATTGGTTGATCTGAAATAATTTCTTGAACTGAAATTAGGTGTATGTTATAACTGAACTCATTCCTACAATTATTTTCTTATGTAGTCAGAAGCTGAAGAAGAGTTCAAAATCAACTGGAAACGTGTCGGTATCACAAGCATGTTTGGATTTGGTTTTGTTGGACCGGTCGGCCACATGTGGTTTGTTTCCTTTATCTTTTCCTTATCTACTTCTGGCCATATCTATTATCTTTGTTACCAAATGAAAAGTGCCAACAATGTTGCTTGAATCAAGATTTTTCTTGAAAGCAAAAATAGAATTGCTCATCTAATGCCGTCCTCATTTTTAAGAATAAGCTATTATTATTCTGAACTTTGATTTCGGTTTGGACATTTCTTTATCTTGAAATATATGGATGGATGTTTGAAATCGGGTTTCAAGGCCACGAGATATTTAGTTTAGCTATATATATTTTTCCACAGATGTCTCCCTATACTCTCAGGAAGGCAACATGGTTCTGCTTTGTCTGTTATTTTTTATTCTCGTGTTTTTGTAAATGCATACATTGAAGTGCTGAATCTCACTAGCAGATTTGAACTAAGTTTGCTGATGAAAATTGGTTTGTCTGATTTAATCTTCATTGTTCTTTATGACGTTAACACCTTAAAACAATTAACAGCATGATGGTGTGATAAAGTACTTTAGATTCTTGTATCAAGTGCACTAATGGAGAGAAAATCGTTTCCTTTTTATCTTTTTATCTTTTGCAACATGTGTGGAACTAATCAATAATATTTAACCATATAGGGATGTTCCATTTATGGTTTTGATAATTTTGGATCCATGAAGTTCAGGGTAGGATAGTCTGAAGTGTATAATTTGTGTTTGGCTTATACTAGGAAATAAATTCTAAAGATATAAGAGTTTGGTTTGTGGATTTATAATTTGTGAAAGTTAACCAGTAGTATAAAAAGTGGGTTTCATATGCTTGAGTTTATATAACCTTTGGGTTTATCTAACTCATATTTTGAGATGAGTAAACCCATTTACCAAACATAGGCTCAATTTATTATTTGTATATTATTTGTCACAAATTTTTTTAAGAGATTTGATCCTGTGGGCAGGTATGAAGGCTTGGACAGATTTATAAGGCTAAGACTTCAGCTACAGCCAAAATCAGCTAAGTTTGTTGGGGCAAAACTGGCACTGGATGGTCTTCTCTTCGGGCCAATCGACTTAATTGTCTTCTTCAGTTATATGGGACTTGCCAACGGCAAAAATGTTTCTGAAGTGAAAGAAGACTTGAAGAGGGACGTCCTCCCTGCGTTTCTCTTGTCGGGGACAGTGTGGCCTATCGTTCAGGTCGCAAACTTCCGATACGTGCCAGTGAGGTACCAACTCCTCTATGTTAACTTGTTCTGCTTGTTGGACAGTGCGTTTTTGTCATGGTTTGAGCAACAAAATGATGCTCCTTGGAAGCAATGGTTTACATCTTTTAACCCTTTTAAAGAAAGATAAGAGATTTTGAGAGCTATCTTCTCAATCTTGTAGCCTTCTTTTTCTTTTAACTCATCACATTGGACAGAGGAACGCTGATTTGTTCCCTTTATAGACTGTGAAGATATTCTAAGCCACTTTTGTGCAATCTCTGTGTTTCAATCAATCATCATGCCCTGTTTCATTGAAATATAGCCCATAGATTTTCCTGTGCATTCCCAACTTTGACCCTGTATTTCTCAAGAGGAAGTAACA ATGTTTAGGCTCTGGAAATGGTATCAGAACTGTCTCACCTTCCATCCGGTGAAGACCCAGGTCATCAGTTCCGGCTTCATATGGGGCACCGGCGACATTGCAGCCCAATACATTACTCACTCCGCCGCCAAAAACCGTCTCCGAACTTCTGTGAGCATCAATTCCTTCATTTTCTTTTCGCTTTTACTTTGTTGGTATGTGTCAGAAGCTGAAGAAGAGTTCAAAATCAACTGGAAACGTGTCGGTATCACAAGCATGTTTGGATTTGGTTTTGTTGGACCGGTCGGCCACATGTGGTATGAAGGCTTGGACAGATTTATAAGGCTAAGACTTCAGCTACAGCCAAAATCAGCTAAGTTTGTTGGGGCAAAACTGGCACTGGATGGTCTTCTCTTCGGGCCAATCGACTTAATTGTCTTCTTCAGTTATATGGGACTTGCCAACGGCAAAAATGTTTCTGAAGTGAAAGAAGACTTGAAGAGGGACGTCCTCCCTGCGTTTCTCTTGTCGGGGACAGTGTGGCCTATCGTTCAGGTCGCAAACTTCCGATACGTGCCAGTGAGGTACCAACTCCTCTATGTTAACTTGTTCTGCTTGTTGGACAGTGCGTTTTTGTCATGGTTTGAGCAACAAAATGATGCTCCTTGGAAGCAATGGTTTACATCTTTTAACCCTTTTAAAGAAAGATAA ATGTTTAGGCTCTGGAAATGGTATCAGAACTGTCTCACCTTCCATCCGGTGAAGACCCAGGTCATCAGTTCCGGCTTCATATGGGGCACCGGCGACATTGCAGCCCAATACATTACTCACTCCGCCGCCAAAAACCGTCTCCGAACTTCTGTGAGCATCAATTCCTTCATTTTCTTTTCGCTTTTACTTTGTTGGTATGTGTCAGAAGCTGAAGAAGAGTTCAAAATCAACTGGAAACGTGTCGGTATCACAAGCATGTTTGGATTTGGTTTTGTTGGACCGGTCGGCCACATGTGGTATGAAGGCTTGGACAGATTTATAAGGCTAAGACTTCAGCTACAGCCAAAATCAGCTAAGTTTGTTGGGGCAAAACTGGCACTGGATGGTCTTCTCTTCGGGCCAATCGACTTAATTGTCTTCTTCAGTTATATGGGACTTGCCAACGGCAAAAATGTTTCTGAAGTGAAAGAAGACTTGAAGAGGGACGTCCTCCCTGCGTTTCTCTTGTCGGGGACAGTGTGGCCTATCGTTCAGGTCGCAAACTTCCGATACGTGCCAGTGAGGTACCAACTCCTCTATGTTAACTTGTTCTGCTTGTTGGACAGTGCGTTTTTGTCATGGTTTGAGCAACAAAATGATGCTCCTTGGAAGCAATGGTTTACATCTTTTAACCCTTTTAAAGAAAGATAA MFRLWKWYQNCLTFHPVKTQVISSGFIWGTGDIAAQYITHSAAKNRLRTSVSINSFIFFSLLLCWYVSEAEEEFKINWKRVGITSMFGFGFVGPVGHMWYEGLDRFIRLRLQLQPKSAKFVGAKLALDGLLFGPIDLIVFFSYMGLANGKNVSEVKEDLKRDVLPAFLLSGTVWPIVQVANFRYVPVRYQLLYVNLFCLLDSAFLSWFEQQNDAPWKQWFTSFNPFKER Homology
BLAST of Spg003449 vs. NCBI nr
Match: XP_038890073.1 (PXMP2/4 family protein 2 [Benincasa hispida]) HSP 1 Score: 419.9 bits (1078), Expect = 1.5e-113 Identity = 196/229 (85.59%), Postives = 208/229 (90.83%), Query Frame = 0
BLAST of Spg003449 vs. NCBI nr
Match: XP_008458377.1 (PREDICTED: protein Mpv17 [Cucumis melo] >KAA0061553.1 protein Mpv17 [Cucumis melo var. makuwa] >TYK10719.1 protein Mpv17 [Cucumis melo var. makuwa]) HSP 1 Score: 414.8 bits (1065), Expect = 4.7e-112 Identity = 195/229 (85.15%), Postives = 206/229 (89.96%), Query Frame = 0
BLAST of Spg003449 vs. NCBI nr
Match: XP_022157554.1 (protein Mpv17 isoform X1 [Momordica charantia]) HSP 1 Score: 412.9 bits (1060), Expect = 1.8e-111 Identity = 195/229 (85.15%), Postives = 205/229 (89.52%), Query Frame = 0
BLAST of Spg003449 vs. NCBI nr
Match: KAG6586431.1 (PXMP2/4 family protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021285.1 PXMP2/4 family protein 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 412.5 bits (1059), Expect = 2.3e-111 Identity = 196/229 (85.59%), Postives = 205/229 (89.52%), Query Frame = 0
BLAST of Spg003449 vs. NCBI nr
Match: XP_004139343.1 (protein Mpv17 [Cucumis sativus] >KGN60615.1 hypothetical protein Csa_019184 [Cucumis sativus]) HSP 1 Score: 412.1 bits (1058), Expect = 3.0e-111 Identity = 193/229 (84.28%), Postives = 205/229 (89.52%), Query Frame = 0
BLAST of Spg003449 vs. ExPASy Swiss-Prot
Match: Q66GV0 (Protein Mpv17 OS=Xenopus laevis OX=8355 GN=mpv17 PE=2 SV=2) HSP 1 Score: 95.1 bits (235), Expect = 1.1e-18 Identity = 66/208 (31.73%), Postives = 98/208 (47.12%), Query Frame = 0
BLAST of Spg003449 vs. ExPASy Swiss-Prot
Match: Q4IPX8 (Protein SYM1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=SYM1 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.1e-18 Identity = 60/206 (29.13%), Postives = 96/206 (46.60%), Query Frame = 0
BLAST of Spg003449 vs. ExPASy Swiss-Prot
Match: Q5BK62 (Protein Mpv17 OS=Rattus norvegicus OX=10116 GN=Mpv17 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 7.0e-18 Identity = 63/209 (30.14%), Postives = 90/209 (43.06%), Query Frame = 0
BLAST of Spg003449 vs. ExPASy Swiss-Prot
Match: P39210 (Protein Mpv17 OS=Homo sapiens OX=9606 GN=MPV17 PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 9.1e-18 Identity = 65/210 (30.95%), Postives = 92/210 (43.81%), Query Frame = 0
BLAST of Spg003449 vs. ExPASy Swiss-Prot
Match: Q5TZ51 (Protein Mpv17 OS=Danio rerio OX=7955 GN=mpv17 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.6e-17 Identity = 60/207 (28.99%), Postives = 92/207 (44.44%), Query Frame = 0
BLAST of Spg003449 vs. ExPASy TrEMBL
Match: A0A5A7V092 (Protein Mpv17 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00280 PE=3 SV=1) HSP 1 Score: 414.8 bits (1065), Expect = 2.3e-112 Identity = 195/229 (85.15%), Postives = 206/229 (89.96%), Query Frame = 0
BLAST of Spg003449 vs. ExPASy TrEMBL
Match: A0A1S3C7P9 (protein Mpv17 OS=Cucumis melo OX=3656 GN=LOC103497800 PE=3 SV=1) HSP 1 Score: 414.8 bits (1065), Expect = 2.3e-112 Identity = 195/229 (85.15%), Postives = 206/229 (89.96%), Query Frame = 0
BLAST of Spg003449 vs. ExPASy TrEMBL
Match: A0A6J1DWT2 (protein Mpv17 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024221 PE=3 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 8.6e-112 Identity = 195/229 (85.15%), Postives = 205/229 (89.52%), Query Frame = 0
BLAST of Spg003449 vs. ExPASy TrEMBL
Match: A0A0A0LF15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004160 PE=3 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 1.5e-111 Identity = 193/229 (84.28%), Postives = 205/229 (89.52%), Query Frame = 0
BLAST of Spg003449 vs. ExPASy TrEMBL
Match: A0A6J1FIE5 (protein SYM1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444406 PE=3 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 4.3e-111 Identity = 195/229 (85.15%), Postives = 204/229 (89.08%), Query Frame = 0
BLAST of Spg003449 vs. TAIR 10
Match: AT3G24570.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 336.7 bits (862), Expect = 1.5e-92 Identity = 155/232 (66.81%), Postives = 185/232 (79.74%), Query Frame = 0
BLAST of Spg003449 vs. TAIR 10
Match: AT3G24570.2 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 298.5 bits (763), Expect = 4.6e-81 Identity = 143/232 (61.64%), Postives = 173/232 (74.57%), Query Frame = 0
BLAST of Spg003449 vs. TAIR 10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 83.6 bits (205), Expect = 2.3e-16 Identity = 54/209 (25.84%), Postives = 85/209 (40.67%), Query Frame = 0
BLAST of Spg003449 vs. TAIR 10
Match: AT2G14860.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 72.8 bits (177), Expect = 4.1e-13 Identity = 53/204 (25.98%), Postives = 87/204 (42.65%), Query Frame = 0
BLAST of Spg003449 vs. TAIR 10
Match: AT4G04470.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 72.0 bits (175), Expect = 6.9e-13 Identity = 47/200 (23.50%), Postives = 92/200 (46.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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