Spg003293 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003293
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Serine-rich protein-like protein
Location	scaffold4: 46836689 .. 46837291 (-)
RNA-Seq Expression	Spg003293
Synteny	Spg003293

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCAACTTCTCGGAGATCGAACGGATCAGTTCTTAGATCGCTCTCACCGTCCGGTAGATTCTACGGTTACCGGAGTTCATCTCCGTCGGCGTTCGCGTCGTCGACCTCCAGTTTCTCCTCCAGATCCGCCACTTCCTTCTTTTGCAGATCGACTTCCCCGTCGCGCGTGAAGCTCCACGGTTCGTCTTCAGTTTCCGTGCCGTCGGTGCGTTTTTCTCTTGACCGTGCGACCTCTCCGAATAGATCCGTGTCCGTTTCTTCTCGCAGCGGGGGAAAGAATCAAGTGGTGCAGAGGCAGAGCAGTTCGAAGAGGACGTGTATGTGTTCTCCTACGACTCACCCTGGCTCGTTCCGGTGTAGCCTCCATAAAGGTATTATTTCGCAACCTCACGCGCCGTACTCGCCGAGTAGGTTGAATGCTCGTAGATCGGCGATGACGAATTCTCTGGTTAGAATCGGAGGTGTTGAAGGTGATCTTGTGAAGCGAGCTTTAGCTGCTTTGATTCGGCCTTCTTCTCATCAGCAGCGACGCAGAGTCGATTTTAAGCCGAAGCGTAGCCGGCTCTCGATCATGTCCAAGGCCGAAGAAACATTATAA

mRNA sequence

ATGGCGGCAACTTCTCGGAGATCGAACGGATCAGTTCTTAGATCGCTCTCACCGTCCGGTAGATTCTACGGTTACCGGAGTTCATCTCCGTCGGCGTTCGCGTCGTCGACCTCCAGTTTCTCCTCCAGATCCGCCACTTCCTTCTTTTGCAGATCGACTTCCCCGTCGCGCGTGAAGCTCCACGGTTCGTCTTCAGTTTCCGTGCCGTCGGTGCGTTTTTCTCTTGACCGTGCGACCTCTCCGAATAGATCCGTGTCCGTTTCTTCTCGCAGCGGGGGAAAGAATCAAGTGGTGCAGAGGCAGAGCAGTTCGAAGAGGACGTGTATGTGTTCTCCTACGACTCACCCTGGCTCGTTCCGGTGTAGCCTCCATAAAGGTATTATTTCGCAACCTCACGCGCCGTACTCGCCGAGTAGGTTGAATGCTCGTAGATCGGCGATGACGAATTCTCTGGTTAGAATCGGAGGTGTTGAAGGTGATCTTGTGAAGCGAGCTTTAGCTGCTTTGATTCGGCCTTCTTCTCATCAGCAGCGACGCAGAGTCGATTTTAAGCCGAAGCGTAGCCGGCTCTCGATCATGTCCAAGGCCGAAGAAACATTATAA

Coding sequence (CDS)

ATGGCGGCAACTTCTCGGAGATCGAACGGATCAGTTCTTAGATCGCTCTCACCGTCCGGTAGATTCTACGGTTACCGGAGTTCATCTCCGTCGGCGTTCGCGTCGTCGACCTCCAGTTTCTCCTCCAGATCCGCCACTTCCTTCTTTTGCAGATCGACTTCCCCGTCGCGCGTGAAGCTCCACGGTTCGTCTTCAGTTTCCGTGCCGTCGGTGCGTTTTTCTCTTGACCGTGCGACCTCTCCGAATAGATCCGTGTCCGTTTCTTCTCGCAGCGGGGGAAAGAATCAAGTGGTGCAGAGGCAGAGCAGTTCGAAGAGGACGTGTATGTGTTCTCCTACGACTCACCCTGGCTCGTTCCGGTGTAGCCTCCATAAAGGTATTATTTCGCAACCTCACGCGCCGTACTCGCCGAGTAGGTTGAATGCTCGTAGATCGGCGATGACGAATTCTCTGGTTAGAATCGGAGGTGTTGAAGGTGATCTTGTGAAGCGAGCTTTAGCTGCTTTGATTCGGCCTTCTTCTCATCAGCAGCGACGCAGAGTCGATTTTAAGCCGAAGCGTAGCCGGCTCTCGATCATGTCCAAGGCCGAAGAAACATTATAA

Protein sequence

MAATSRRSNGSVLRSLSPSGRFYGYRSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVKLHGSSSVSVPSVRFSLDRATSPNRSVSVSSRSGGKNQVVQRQSSSKRTCMCSPTTHPGSFRCSLHKGIISQPHAPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKPKRSRLSIMSKAEETL

Homology

[Close]

BLAST of Spg003293 vs. NCBI nr
Match: XP_038890503.1 (uncharacterized protein LOC120080038 [Benincasa hispida])

HSP 1 Score: 342.0 bits (876), Expect = 3.4e-90
Identity = 188/200 (94.00%), Postives = 192/200 (96.00%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSGRFYGYRSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVKL 60
           MAATSRRSN SVLRSLSPSGRFYGYRSSS SAFASS+SSFSS SATSFFCRSTSPSRVKL
Sbjct: 1   MAATSRRSNASVLRSLSPSGRFYGYRSSSSSAFASSSSSFSSGSATSFFCRSTSPSRVKL 60

Query: 61  HGSSSVSVPSVRFSLDRATSPNRSVSVSSRSGGKNQVVQRQSSSKRTCMCSPTTHPGSFR 120
           HGS SVSVPSVRFSLDRATSPNRSVSVSSRSGG ++VVQRQSSSKRTCMCSPTTHPGSFR
Sbjct: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSRSGGSHRVVQRQSSSKRTCMCSPTTHPGSFR 120

Query: 121 CSLHKGIISQPHAPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180
           CSLHKGIISQP  PYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR
Sbjct: 121 CSLHKGIISQPTVPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180

Query: 181 VDFKPKRSRLSIMSKAEETL 201
            DF+PKRSRLSIMSKAEETL
Sbjct: 181 SDFRPKRSRLSIMSKAEETL 200

[Close]

BLAST of Spg003293 vs. NCBI nr
Match: KAG6586344.1 (hypothetical protein SDJN03_19077, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021190.1 hypothetical protein SDJN02_17878, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 339.0 bits (868), Expect = 2.9e-89
Identity = 186/200 (93.00%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSGRFYGYRSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVKL 60
           MAATSRRSNGSVLRS S S RFYGYR+SSPSAFASSTSSFSS SATSFFCRSTSPSRVK+
Sbjct: 1   MAATSRRSNGSVLRSFSSSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60

Query: 61  HGSSSVSVPSVRFSLDRATSPNRSVSVSSRSGGKNQVVQRQSSSKRTCMCSPTTHPGSFR 120
           HGSSSVSVPSVRF +DRA SPNRSVSVSSRSGGKNQVV+RQSSSKRTCMCSPTTHPGSFR
Sbjct: 61  HGSSSVSVPSVRFYVDRAISPNRSVSVSSRSGGKNQVVKRQSSSKRTCMCSPTTHPGSFR 120

Query: 121 CSLHKGIISQPHAPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180
           CSLHKGIISQPHAPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR
Sbjct: 121 CSLHKGIISQPHAPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180

Query: 181 VDFKPKRSRLSIMSKAEETL 201
            DFKP+ SRLSIMSKA ETL
Sbjct: 181 GDFKPRSSRLSIMSKAVETL 200

[Close]

BLAST of Spg003293 vs. NCBI nr
Match: XP_022965947.1 (uncharacterized protein LOC111465673 [Cucurbita maxima])

HSP 1 Score: 339.0 bits (868), Expect = 2.9e-89
Identity = 186/200 (93.00%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSGRFYGYRSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVKL 60
           MAATSRRSNGSVLRS SPS RFYGYR+SSPSAFASSTSSFSS SATSFFCRSTSPSRVK+
Sbjct: 1   MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60

Query: 61  HGSSSVSVPSVRFSLDRATSPNRSVSVSSRSGGKNQVVQRQSSSKRTCMCSPTTHPGSFR 120
           HGSSSVSVPSVRF +DRA SPNRSVSVSSRS GKNQVV+RQSSSKRTCMCSPTTHPGSFR
Sbjct: 61  HGSSSVSVPSVRFYVDRAISPNRSVSVSSRSSGKNQVVKRQSSSKRTCMCSPTTHPGSFR 120

Query: 121 CSLHKGIISQPHAPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180
           CSLHKGIISQPHAPYSPSRL+ARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR
Sbjct: 121 CSLHKGIISQPHAPYSPSRLSARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180

Query: 181 VDFKPKRSRLSIMSKAEETL 201
            DFKPK SRLSIMSKA ETL
Sbjct: 181 GDFKPKSSRLSIMSKAVETL 200

[Close]

BLAST of Spg003293 vs. NCBI nr
Match: XP_022937837.1 (uncharacterized protein LOC111444107 [Cucurbita moschata])

HSP 1 Score: 338.2 bits (866), Expect = 4.9e-89
Identity = 185/200 (92.50%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSGRFYGYRSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVKL 60
           MAATSRRSNGSVLRS SPS RFYGYR+SSPSAFASSTSSFSS SATSFFCRSTSPSRVK+
Sbjct: 1   MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60

Query: 61  HGSSSVSVPSVRFSLDRATSPNRSVSVSSRSGGKNQVVQRQSSSKRTCMCSPTTHPGSFR 120
           HGSSSVSVPSVRF +DRA SPNRSVSVSSR GGKNQVV+RQ+SSKRTCMCSPTTHPGSFR
Sbjct: 61  HGSSSVSVPSVRFYVDRAISPNRSVSVSSRGGGKNQVVKRQNSSKRTCMCSPTTHPGSFR 120

Query: 121 CSLHKGIISQPHAPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180
           CSLHKGIISQPHAPY PSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR
Sbjct: 121 CSLHKGIISQPHAPYLPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180

Query: 181 VDFKPKRSRLSIMSKAEETL 201
            DFKPK SRLSIMSKA ETL
Sbjct: 181 GDFKPKSSRLSIMSKAVETL 200

[Close]

BLAST of Spg003293 vs. NCBI nr
Match: KAA0063558.1 (putative serine-rich protein C215.13-like protein [Cucumis melo var. makuwa] >TYJ97884.1 putative serine-rich protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 334.0 bits (855), Expect = 9.2e-88
Identity = 186/201 (92.54%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSGRFYGYRSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVKL 60
           MAATSRRS+ SVLRSLSPSGRFYG+R+SS SAFASSTS+FSSRSATSFFCRSTSPSRV L
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSSAFASSTSTFSSRSATSFFCRSTSPSRVNL 60

Query: 61  HGSSSVSVPSVRFSLDRATSPNRSVSV-SSRSGGKNQVVQRQSSSKRTCMCSPTTHPGSF 120
           HGS SVSVPSVRFSLDRATSPNRSVSV SSRSGG N+VVQRQSSSKRTCMCSPTTHPGSF
Sbjct: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSSRSGGTNRVVQRQSSSKRTCMCSPTTHPGSF 120

Query: 121 RCSLHKGIISQPHAPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180
           RCSLHKGIISQP A YSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR
Sbjct: 121 RCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180

Query: 181 RVDFKPKRSRLSIMSKAEETL 201
           RVDF+PKRSRLSIMSKA+ETL
Sbjct: 181 RVDFRPKRSRLSIMSKADETL 201

[Close]

BLAST of Spg003293 vs. ExPASy TrEMBL
Match: A0A6J1HLP3 (uncharacterized protein LOC111465673 OS=Cucurbita maxima OX=3661 GN=LOC111465673 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.4e-89
Identity = 186/200 (93.00%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSGRFYGYRSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVKL 60
           MAATSRRSNGSVLRS SPS RFYGYR+SSPSAFASSTSSFSS SATSFFCRSTSPSRVK+
Sbjct: 1   MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60

Query: 61  HGSSSVSVPSVRFSLDRATSPNRSVSVSSRSGGKNQVVQRQSSSKRTCMCSPTTHPGSFR 120
           HGSSSVSVPSVRF +DRA SPNRSVSVSSRS GKNQVV+RQSSSKRTCMCSPTTHPGSFR
Sbjct: 61  HGSSSVSVPSVRFYVDRAISPNRSVSVSSRSSGKNQVVKRQSSSKRTCMCSPTTHPGSFR 120

Query: 121 CSLHKGIISQPHAPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180
           CSLHKGIISQPHAPYSPSRL+ARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR
Sbjct: 121 CSLHKGIISQPHAPYSPSRLSARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180

Query: 181 VDFKPKRSRLSIMSKAEETL 201
            DFKPK SRLSIMSKA ETL
Sbjct: 181 GDFKPKSSRLSIMSKAVETL 200

[Close]

BLAST of Spg003293 vs. ExPASy TrEMBL
Match: A0A6J1FCB9 (uncharacterized protein LOC111444107 OS=Cucurbita moschata OX=3662 GN=LOC111444107 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.4e-89
Identity = 185/200 (92.50%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSGRFYGYRSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVKL 60
           MAATSRRSNGSVLRS SPS RFYGYR+SSPSAFASSTSSFSS SATSFFCRSTSPSRVK+
Sbjct: 1   MAATSRRSNGSVLRSFSPSERFYGYRNSSPSAFASSTSSFSSGSATSFFCRSTSPSRVKV 60

Query: 61  HGSSSVSVPSVRFSLDRATSPNRSVSVSSRSGGKNQVVQRQSSSKRTCMCSPTTHPGSFR 120
           HGSSSVSVPSVRF +DRA SPNRSVSVSSR GGKNQVV+RQ+SSKRTCMCSPTTHPGSFR
Sbjct: 61  HGSSSVSVPSVRFYVDRAISPNRSVSVSSRGGGKNQVVKRQNSSKRTCMCSPTTHPGSFR 120

Query: 121 CSLHKGIISQPHAPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180
           CSLHKGIISQPHAPY PSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR
Sbjct: 121 CSLHKGIISQPHAPYLPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRR 180

Query: 181 VDFKPKRSRLSIMSKAEETL 201
            DFKPK SRLSIMSKA ETL
Sbjct: 181 GDFKPKSSRLSIMSKAVETL 200

[Close]

BLAST of Spg003293 vs. ExPASy TrEMBL
Match: A0A5A7V7K3 (Putative serine-rich protein C215.13-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00990 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.4e-88
Identity = 186/201 (92.54%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSGRFYGYRSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVKL 60
           MAATSRRS+ SVLRSLSPSGRFYG+R+SS SAFASSTS+FSSRSATSFFCRSTSPSRV L
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSSAFASSTSTFSSRSATSFFCRSTSPSRVNL 60

Query: 61  HGSSSVSVPSVRFSLDRATSPNRSVSV-SSRSGGKNQVVQRQSSSKRTCMCSPTTHPGSF 120
           HGS SVSVPSVRFSLDRATSPNRSVSV SSRSGG N+VVQRQSSSKRTCMCSPTTHPGSF
Sbjct: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSSRSGGTNRVVQRQSSSKRTCMCSPTTHPGSF 120

Query: 121 RCSLHKGIISQPHAPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180
           RCSLHKGIISQP A YSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR
Sbjct: 121 RCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180

Query: 181 RVDFKPKRSRLSIMSKAEETL 201
           RVDF+PKRSRLSIMSKA+ETL
Sbjct: 181 RVDFRPKRSRLSIMSKADETL 201

[Close]

BLAST of Spg003293 vs. ExPASy TrEMBL
Match: A0A1S4E2K6 (uncharacterized protein LOC103496492 OS=Cucumis melo OX=3656 GN=LOC103496492 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.4e-88
Identity = 186/201 (92.54%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSGRFYGYRSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVKL 60
           MAATSRRS+ SVLRSLSPSGRFYG+R+SS SAFASSTS+FSSRSATSFFCRSTSPSRV L
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSSAFASSTSTFSSRSATSFFCRSTSPSRVNL 60

Query: 61  HGSSSVSVPSVRFSLDRATSPNRSVSVSS-RSGGKNQVVQRQSSSKRTCMCSPTTHPGSF 120
           HGS SVSVPSVRFSLDRATSPNRSVSVSS RSGG N+VVQRQSSSKRTCMCSPTTHPGSF
Sbjct: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSPRSGGTNRVVQRQSSSKRTCMCSPTTHPGSF 120

Query: 121 RCSLHKGIISQPHAPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180
           RCSLHKGIISQP A YSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR
Sbjct: 121 RCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180

Query: 181 RVDFKPKRSRLSIMSKAEETL 201
           RVDF+PKRSRLSIMSKA+ETL
Sbjct: 181 RVDFRPKRSRLSIMSKADETL 201

[Close]

BLAST of Spg003293 vs. ExPASy TrEMBL
Match: A0A0A0LL69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009440 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 9.9e-88
Identity = 185/201 (92.04%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSGRFYGYRSSSPSAFASSTSSFSSRSATSFFCRSTSPSRVKL 60
           MAATSRRS+ SVLRSLSPSGRFYG+R+SS SAFASSTS+FSSRSATSFFCRSTSPSRV L
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSSAFASSTSTFSSRSATSFFCRSTSPSRVNL 60

Query: 61  HGSSSVSVPSVRFSLDRATSPNRSVSV-SSRSGGKNQVVQRQSSSKRTCMCSPTTHPGSF 120
           HGS SVSVPSVRFSLDRATSPNRSVSV SSRSGG N+VVQRQSS+KRTCMCSPTTHPGSF
Sbjct: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSSRSGGTNRVVQRQSSTKRTCMCSPTTHPGSF 120

Query: 121 RCSLHKGIISQPHAPYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180
           RCSLHKGIISQP A YSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR
Sbjct: 121 RCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180

Query: 181 RVDFKPKRSRLSIMSKAEETL 201
           RVDF+PKRSRLSIMSKA+ETL
Sbjct: 181 RVDFRPKRSRLSIMSKADETL 201

[Close]

BLAST of Spg003293 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 169.1 bits (427), Expect = 3.6e-42
Identity = 123/224 (54.91%), Postives = 150/224 (66.96%), Query Frame = 0


Query: 1   MAATS---RRSNGSV-LRSLSPSGRFYG-----YRSSSPSA--FASSTSSFSSRSATSFF 60
           MA TS    RSNGS  LRS SPSGRF G       SSSPS+  FASSTSS  S  +T+FF
Sbjct: 1   MAITSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFF 60

Query: 61  C----------RSTSPSRVKLHGSSSVSVPSVRFSLD-RATSPNRSVSVSSRSGGKNQVV 120
                      RS SP+RV L  S+ ++  S R+S+D R+ SPNRS++VSS     +  +
Sbjct: 61  SSHNQNNHHQHRSASPTRVNLFTSAPMT-QSFRYSIDNRSISPNRSIAVSSNKPSNHHKI 120

Query: 121 QRQSSSKRTCMCSPTTHPGSFRCSLHKGIISQPH----APYSPSRLNARRSAMTNSLVRI 180
                S+R CMCSPTTHPGSFRCSLHK  ++ PH    A Y+ + LN RRSAMTNSLVRI
Sbjct: 121 ---PDSRRRCMCSPTTHPGSFRCSLHKN-VANPHGQGTASYTTNGLNMRRSAMTNSLVRI 180

Query: 181 GGVEGDLVKRALAALIRPSSHQQRRRVDFKPKRSRLSIMSKAEE 199
           GGVEG+ V+RAL  LIRPSSHQ +RR  ++P+RSRL+ MSKAE+
Sbjct: 181 GGVEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAED 219

[Close]

BLAST of Spg003293 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 169.1 bits (427), Expect = 3.6e-42
Identity = 123/224 (54.91%), Postives = 150/224 (66.96%), Query Frame = 0


Query: 1   MAATS---RRSNGSV-LRSLSPSGRFYG-----YRSSSPSA--FASSTSSFSSRSATSFF 60
           MA TS    RSNGS  LRS SPSGRF G       SSSPS+  FASSTSS  S  +T+FF
Sbjct: 1   MAITSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFF 60

Query: 61  C----------RSTSPSRVKLHGSSSVSVPSVRFSLD-RATSPNRSVSVSSRSGGKNQVV 120
                      RS SP+RV L  S+ ++  S R+S+D R+ SPNRS++VSS     +  +
Sbjct: 61  SSHNQNNHHQHRSASPTRVNLFTSAPMT-QSFRYSIDNRSISPNRSIAVSSNKPSNHHKI 120

Query: 121 QRQSSSKRTCMCSPTTHPGSFRCSLHKGIISQPH----APYSPSRLNARRSAMTNSLVRI 180
                S+R CMCSPTTHPGSFRCSLHK  ++ PH    A Y+ + LN RRSAMTNSLVRI
Sbjct: 121 ---PDSRRRCMCSPTTHPGSFRCSLHKN-VANPHGQGTASYTTNGLNMRRSAMTNSLVRI 180

Query: 181 GGVEGDLVKRALAALIRPSSHQQRRRVDFKPKRSRLSIMSKAEE 199
           GGVEG+ V+RAL  LIRPSSHQ +RR  ++P+RSRL+ MSKAE+
Sbjct: 181 GGVEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAED 219

[Close]

BLAST of Spg003293 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 168.7 bits (426), Expect = 4.8e-42
Identity = 122/223 (54.71%), Postives = 145/223 (65.02%), Query Frame = 0


Query: 1   MAATSRR--SNGSVLRSLSPSGRFYG-----YRSSSPSAFASSTSSFSSRSATSFFC--- 60
           M  TS R  SNG VLRS SPSGRF G       SSS SAFASSTSS  S  +++FF    
Sbjct: 1   MVTTSSRTKSNGPVLRSQSPSGRFCGGYSRAVPSSSSSAFASSTSSSFSSPSSAFFSNHR 60

Query: 61  ---------RSTSPSRVKLHGSSSVSVPSVRFSLD-RATSP-NRSVSVSSRSGGKNQVVQ 120
                    RS SP+RV L+ +  +S  S R+SLD R+ SP N+S+SVS     KNQ   
Sbjct: 61  HHESNHSHHRSASPTRVNLYTAQPMS-QSFRYSLDSRSISPTNKSISVS-----KNQPPS 120

Query: 121 RQSSSKRTCMCSPTTHPGSFRCSLHKGIISQPH----APYSPSRLNARRSAMTNSLVRIG 180
                 R CMCSPTTHPGSFRCSLHK  ++ PH    A Y+ + LN RRSAMTNSLVRIG
Sbjct: 121 HNHKISRRCMCSPTTHPGSFRCSLHKN-VANPHGQGTASYTTNGLNMRRSAMTNSLVRIG 180

Query: 181 GVEGDLVKRALAALIRPSSHQQRRRVDFKPKRSRLSIMSKAEE 199
           GVEG+ V+RAL  LIRPSSH  +RR  ++P+ SRLSIM+KA+E
Sbjct: 181 GVEGEWVRRALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKADE 216

[Close]

BLAST of Spg003293 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 75.9 bits (185), Expect = 4.2e-14
Identity = 72/211 (34.12%), Postives = 95/211 (45.02%), Query Frame = 0


Query: 1   MAATSRRSNGSVLRSLSPSGRFYG-----YRSSSPSAFASSTSSFSSRSATSFFCRSTSP 60
           MAAT  RS+ SVLR LS S R +      +R  SPS                  C     
Sbjct: 1   MAATG-RSSRSVLRPLSSSQRLHNNHHHHHRQRSPSP-----------------CNKNLN 60

Query: 61  SRVKLHGSSSVSVPSVRFSLDRATSPNRSVSVSSRSGGKNQVVQRQSSSKRTCMCSPTTH 120
            R+K +   S+  PSV             V+VSS              +KR C+CSPTTH
Sbjct: 61  LRLKFYSPGSIPKPSV-------------VTVSS-----------NHQTKRKCLCSPTTH 120

Query: 121 PGSFRCSLHKGIISQPHAPYSPSR----------------LNARRSAMTNSLVRIGGVEG 180
           PGSFRCS H+ +  +     + S                 LN R+ A+ NSL +IG VE 
Sbjct: 121 PGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNVGLNLRKLALMNSLAKIGSVEA 169

Query: 181 DLVKRALAA-LIRPSSHQQRRRVDFKPKRSR 190
           +  +R+LAA L +PSS    RR +F+P+ SR
Sbjct: 181 ERFRRSLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]

BLAST of Spg003293 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 6.1e-05
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 0


Query: 82  NRSVSVSSRSGGKNQVVQRQSSSKRTCMCSPTTHPGSFRCSLHKGIISQ 131
           N +V V SR      + ++ S +K  C+CSPTTHPGSFRC +H+ +  Q
Sbjct: 23  NSAVEVGSRG-----LSRQTSMTKTNCLCSPTTHPGSFRCRIHRSLSLQ 66

The following BLAST results are available for this feature:

BLAST of Spg003293 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890503.1	3.4e-90	94.00	uncharacterized protein LOC120080038 [Benincasa hispida]	[more]
KAG6586344.1	2.9e-89	93.00	hypothetical protein SDJN03_19077, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022965947.1	2.9e-89	93.00	uncharacterized protein LOC111465673 [Cucurbita maxima]	[more]
XP_022937837.1	4.9e-89	92.50	uncharacterized protein LOC111444107 [Cucurbita moschata]	[more]
KAA0063558.1	9.2e-88	92.54	putative serine-rich protein C215.13-like protein [Cucumis melo var. makuwa] >TY...	[more]

BLAST of Spg003293 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg003293 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HLP3	1.4e-89	93.00	uncharacterized protein LOC111465673 OS=Cucurbita maxima OX=3661 GN=LOC111465673...	[more]
A0A6J1FCB9	2.4e-89	92.50	uncharacterized protein LOC111444107 OS=Cucurbita moschata OX=3662 GN=LOC1114441...	[more]
A0A5A7V7K3	4.4e-88	92.54	Putative serine-rich protein C215.13-like protein OS=Cucumis melo var. makuwa OX...	[more]
A0A1S4E2K6	4.4e-88	92.54	uncharacterized protein LOC103496492 OS=Cucumis melo OX=3656 GN=LOC103496492 PE=...	[more]
A0A0A0LL69	9.9e-88	92.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009440 PE=4 SV=1	[more]

BLAST of Spg003293 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25280.1	3.6e-42	54.91	serine-rich protein-related	[more]
AT5G25280.2	3.6e-42	54.91	serine-rich protein-related	[more]
AT5G11090.1	4.8e-42	54.71	serine-rich protein-related	[more]
AT5G20370.1	4.2e-14	34.12	serine-rich protein-related	[more]
AT1G67910.1	6.1e-05	44.90	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..109
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 1..198
None	No IPR available	PANTHER	PTHR33132:SF75	SUBFAMILY NOT NAMED	coord: 1..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003293.1	Spg003293.1	mRNA