Spg003271 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg003271
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold4: 45348406 .. 45350401 (-)
RNA-Seq ExpressionSpg003271
SyntenySpg003271
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAAAAGTTGTAAATTAGTATTATGCATCACACTTTATTATTGATATTGTTGATGGTCAAATTTCGCTTAGGAATTTACTCTTCGCTCCACGTGACGATCAACAGTGAATTTGTAAGAGAGCGGGAAAGACGTGACCTACAAGACGAGCAAACGCTGCACACCGGTGTGGTGTAGACCACACACACTCGGATACTTAAGTTAGCTTTGGCCGGAAAACACGTAGAGTGCGTTTAGGGATTGATGTTTGCATACCTGAATGTGTGTGCGGTCTCCCTTTTTATAGATTTCCCCTTAGGGTTTTCGTCGACGCCGGACTTCAAATGATCTCCGGGCCTTTGGCCCTGGTCGGTCTCCGCAATGGGTCGAGGCCGACCTCATCCTCCTAGGGTTTTTACGAATTCAGAGGTGTTTCGGGACGAACCAGGCGAAACCGGGGCGGTCAGGGACCGAAGGGAGGTGGCCAAGCTCTACCCGCACCCGCGGGCCAAATGGTCGGCCTCGGCCTTATGCCGAGGCCGACCATATGGGTCAGGCCGACCCTTTGGTCCGGTCTTCCTCTAGGTCGGCTTTCTGGTCCCACCTCTGTTCATAATTGTCCTCGTCGGCTCCTTGTGCGTCAGTGTGGTCCAAAATTACCTATAACATTAAGCCCCCACTCTTGAATTGGGATTCAGGTGCGACTTACTGCTATAGGCTGAGTTCCTTAAGCCCGATTTAAGAGTACGACTCTTGTCTCGTGCCGACTTATGTATGACTTCTTTGTTATCCTGCAAGATAGGACGGACTAGACAAAGTAGAAACTCCCTGAATAGGGGTTAGGTGAAATGGAAATGAGAAAAATGAGAGATTACAAAAATGGCTGGAGGGCCTCTCTGGTCGGCCTCAGCCTCGGGAAAAGGCCGAGCACAACATTTTCCCATTTTAGCTCAGGAATGGAATGACCTTAACCTATCCCTATTCCCAGCCCCCACTAAGAAAATGTGCATTTACTACTTCAGGAGTTGCATTTCCTTCGAGTAAGAAGGACTAACCTCATACTTGACATTTTGAGGACAAAGCTCGACCTCGGAGTTGTGGTGACTGTGGTCATCCCAAGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCTGAGGAAGTTCCCGGGCCTCTCTTCAAGCACTGTGGTCATCCCAGGATTGTTCGTATCTCGAGTGGTGGGTTGTTGCCTCCTTTACCTTGATCTGTCGGTAGTGGTCTTTTCCCTCTGTCTTGTCCCACGAATTCCATGAGGTAGCCCTCTCGGATTAGGCTTTCTATTTCATCCCTTAGCTGTATGCATTCCCGGGTTGTGTGGCCGTGGTCTCCGTGGAACATGCAATATTTATTCCTGTTTCTCCTGTCTGGGTTTGACCTCAACTTTTTCAAACGTTTCAACAGATTTGTATCCTGTATTGCGGGCAAAACCTGTTCAAGTGGAGCTGTTAGCGGTGTATACCTGTTATACTTGGCTTCTGGCTCTGCGCGGCCCTGCGGCTCCTTGGCCTCTGCTCGGCGTCGGCCATTGGCCGAGGAGTGCTCATGTCGGCTCCGGCCTCCATCTTCTACCCGGCGTCCTTTTCCTCTGTCTTCTCGATGTCGGTCAGATATAGAAACTGAAAGATTGGAATTCCGTAATTCCGTAAAGCGGAAGCGTGATTGGGATCGATTCGTAATTAATTTTGTTTAATCTAAAATACCAATACATTGGCAATAATATTAGAACTATTCTAAATATATATTAAGGCTAAGCATACAAAAATATTAGATCTAAATCTAATTTATAAAGTAACAAATTACTTACTCTCATTGACGACTCAGATTAAATTCACCAACTGCTTGTGAATTAATCACGAACTAGTGCGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGAGGCAGGAGACTGGTGGGAGTCTAGAGGAAGCCTTGAGGGGAATTCTCTGAGAGTAGCAGAATGA

mRNA sequence

ATGGGTCGAGGCCGACCTCATCCTCCTAGGGTTTTTACGAATTCAGAGGTGTTTCGGGACGAACCAGGCGAAACCGGGGCGGTCAGGGACCGAAGGGAGGTGGCCAAGCTCTACCCGCACCCGCGGGCCAAATGGTCGGCCTCGGCCTTATGCCGAGGCCGACCATATGGGACTAACCTCATACTTGACATTTTGAGGACAAAGCTCGACCTCGGAGTTGTGGTGACTGTGGTCATCCCAAGGTGCGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGAGGCAGGAGACTGGTGGGAGTCTAGAGGAAGCCTTGAGGGGAATTCTCTGAGAGTAGCAGAATGA

Coding sequence (CDS)

ATGGGTCGAGGCCGACCTCATCCTCCTAGGGTTTTTACGAATTCAGAGGTGTTTCGGGACGAACCAGGCGAAACCGGGGCGGTCAGGGACCGAAGGGAGGTGGCCAAGCTCTACCCGCACCCGCGGGCCAAATGGTCGGCCTCGGCCTTATGCCGAGGCCGACCATATGGGACTAACCTCATACTTGACATTTTGAGGACAAAGCTCGACCTCGGAGTTGTGGTGACTGTGGTCATCCCAAGGTGCGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGAGGCAGGAGACTGGTGGGAGTCTAGAGGAAGCCTTGAGGGGAATTCTCTGAGAGTAGCAGAATGA

Protein sequence

MGRGRPHPPRVFTNSEVFRDEPGETGAVRDRREVAKLYPHPRAKWSASALCRGRPYGTNLILDILRTKLDLGVVVTVVIPRCEHHHYGYTGMTLRLLEAGDWWESRGSLEGNSLRVAE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg003271.1Spg003271.1mRNA