Spg003094 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCAACAACAGGCTTAGCTTCGACGCAGAGGGCTCCCAGCTGGCCTCAGAATTTGGCACTAATGGCTTCTCTTTCACCCTTCAAATTGTCCTTGGTGGCATTAGTTTTGGCCATCTTCACCACATCAACGCTCGCCGTGTTCCGACCCAGCCCGTGGCAGCTCGCCCATGCCACGTTCTATGGCGACGAAACTGCCTCCGCCACCATGGGTATGGAATCATCGTAATAGGTTTACATTTTTTTTTGTTTTTGACAATATGAGATATGGGGGATTCGAACCACAAATCTCGTGGTTATCAATACAATTTTATGTCAGTTGAGCTATGCTCTTGTTGGCAGGTTTACATCTTTTTTTAGGTGATAGGAATGGATTTATTCTCAAATCATTTTGTTGAACACACAAGGAATGATGGTTCATTTGCAGGAGGAGCTTGTGGATATGGAAACTTGTTTACGAATGGCTATGGAACTGATACAGTGGCATTGAGCTCGACACTGTTCAACAATGGCTACGCCTGCGGAACTTGCTTTCAAATTAAATGCGTGCAGTCAAAGGCGTGCTATGCGAACGTGCCGTTCACCACGGTGACGGCGACCAACCTCTGCCCGCCGAATTGGTCGCAGGACTCCAACGCCGGCGGGTGGTGCAACCCACCAAGAGTTCACTTCGACATGGCCAAGCCTGCCTTCATGAAGATCGCTTTGTGGAAGGCCGGAATTGTCCCCGTCCAATACCGCAGGTGAGCTTCTATCGCCACAAACATTATATGGTAGAGACTTAGAATATTTGTTAGTTGTGTTCAAAGAATAAAAGGATTACACTTACCCTAAAACCTTCATTAAGAACTTTTAGGTTTAATTAGGCTGTGACATGGTATTAGATCTCCATCATCCTAATATTGGGTAGTGGAATATTCCAATATTTTTTAGAAAAAACTTGACTGCATACCGGTATGTAAGAATCTCCCTGCATACCACCATTAAAATATTGACAACTAGGTGAGATAAAAAAAAATTTCTCATTTTCTCCCTTCCTCTTTCTTAATATTTTTTTTTAGTTCAACAACAATTAGAGGTGGGAGGATTCGAACAACCAATCTCTTGGTCAATGGTACATGTCAATTAACCGTTGAGTTTTGCTCTCTTGGGCTGAATTATTGCAATGTTATTTCCTTTCAACACCTCATAAAATAGTTTAGTTGTTGAAATTTTGGACCAAGTAGTGACTTAGAGTTGTTTTGGTCCAAAGAGTTGGAGTTATGAAATCTAGAGTTATTTTATCCTAGAATTTGAAGTAGGAGTTAATAAGTTTGTGGGACCCACAATAAAGTATTGGAATAAGACTCCATAAGTTTGTGGGACTCACAATAGAGTGTTGGAATAAGACCTCAAAAGTTTGTGGGACCCACAATAGAGTGTTGTAATTGGTTAATAAGTTTGTAAGTCCCACAATTTGGGTGTTGTATGTTCTTAGGCCAACAACCTCCTTCGACCAAACACTGCTAGAGTTGGTCAATTCCTTGATGTTTCATATAGTAGGTTTTGTGCGTTGATTTCTAGGCTGCGAGAGGGAAGGAGAGGATTAAGAATAGAACGATATATTTGACTGCATACCGATATGTAAGAATTTTCTTACCTATTCCATTAAAATCTTGATAGCGGTAATTTACAGGGTATAGTGGTGGTACCCAAATATAGTACTGGAGTTTGAACCATCCTCTTCTTCATATAATAGTCTAATTGTTAGGTCTTGTCCATCCTCTTCTTCATATAATAGTCTAATTGTTAGGTCTTGTGCCTAAATCTTATTAGTTTAAGCAATTAGGTCTAAAAGGTAATTTAACATAGCTTTGCTTCGAACCACTGCAATGTCATTTCCTTCCTGTTCGATATAATAGTCCACTTGTTGGATACTGAAGACGAATGGTAATTTACAGGGTTCCATGTGTAAGAAAAGGAGGTGTTCGATTGAGCTTCCAAGGAAATGGTTACTGGTTATTAGTGTATGTGATGAACGTAGGAGGAGGAGGCGATGTGTACTCAATGGCAGTGAAAGGAAGCAAAACAGGATGGATAACAATGAGCCATAACTGGGGAGCTTCATACCAAGCTTTTTCCTCGTTGGGTGGCCAATGCCTCTCTTTCAGAATCACTTCTTACACAACCAGAGAGACAATCACTCTTTGGAATGTCGTTCCTGCAAATTGGCAAGTCGGGTTGACTTACAATTCTAATCTCAACTTCCGTTGA ATGCCCAACAACAGGCTTAGCTTCGACGCAGAGGGCTCCCAGCTGGCCTCAGAATTTGGCACTAATGGCTTCTCTTTCACCCTTCAAATTGTCCTTGGTGGCATTAGTTTTGGCCATCTTCACCACATCAACGCTCGCCGTGTTCCGACCCAGCCCGTGGCAGCTCGCCCATGCCACGTTCTATGGCGACGAAACTGCCTCCGCCACCATGGGTATGGAATCATCGTAATAGGAGGAGCTTGTGGATATGGAAACTTGTTTACGAATGGCTATGGAACTGATACAGTGGCATTGAGCTCGACACTGTTCAACAATGGCTACGCCTGCGGAACTTGCTTTCAAATTAAATGCGTGCAGTCAAAGGCGTGCTATGCGAACGTGCCGTTCACCACGGTGACGGCGACCAACCTCTGCCCGCCGAATTGGTCGCAGGACTCCAACGCCGGCGGGTGGTGCAACCCACCAAGAGTTCACTTCGACATGGCCAAGCCTGCCTTCATGAAGATCGCTTTGTGGAAGGCCGGAATTGTCCCCGTCCAATACCGCAGGGTTCCATGTGTAAGAAAAGGAGGTGTTCGATTGAGCTTCCAAGGAAATGGTTACTGGTTATTAGTGTATGTGATGAACGTAGGAGGAGGAGGCGATGTGTACTCAATGGCAGTGAAAGGAAGCAAAACAGGATGGATAACAATGAGCCATAACTGGGGAGCTTCATACCAAGCTTTTTCCTCGTTGGGTGGCCAATGCCTCTCTTTCAGAATCACTTCTTACACAACCAGAGAGACAATCACTCTTTGGAATGTCGTTCCTGCAAATTGGCAAGTCGGGTTGACTTACAATTCTAATCTCAACTTCCGTTGA ATGCCCAACAACAGGCTTAGCTTCGACGCAGAGGGCTCCCAGCTGGCCTCAGAATTTGGCACTAATGGCTTCTCTTTCACCCTTCAAATTGTCCTTGGTGGCATTAGTTTTGGCCATCTTCACCACATCAACGCTCGCCGTGTTCCGACCCAGCCCGTGGCAGCTCGCCCATGCCACGTTCTATGGCGACGAAACTGCCTCCGCCACCATGGGTATGGAATCATCGTAATAGGAGGAGCTTGTGGATATGGAAACTTGTTTACGAATGGCTATGGAACTGATACAGTGGCATTGAGCTCGACACTGTTCAACAATGGCTACGCCTGCGGAACTTGCTTTCAAATTAAATGCGTGCAGTCAAAGGCGTGCTATGCGAACGTGCCGTTCACCACGGTGACGGCGACCAACCTCTGCCCGCCGAATTGGTCGCAGGACTCCAACGCCGGCGGGTGGTGCAACCCACCAAGAGTTCACTTCGACATGGCCAAGCCTGCCTTCATGAAGATCGCTTTGTGGAAGGCCGGAATTGTCCCCGTCCAATACCGCAGGGTTCCATGTGTAAGAAAAGGAGGTGTTCGATTGAGCTTCCAAGGAAATGGTTACTGGTTATTAGTGTATGTGATGAACGTAGGAGGAGGAGGCGATGTGTACTCAATGGCAGTGAAAGGAAGCAAAACAGGATGGATAACAATGAGCCATAACTGGGGAGCTTCATACCAAGCTTTTTCCTCGTTGGGTGGCCAATGCCTCTCTTTCAGAATCACTTCTTACACAACCAGAGAGACAATCACTCTTTGGAATGTCGTTCCTGCAAATTGGCAAGTCGGGTTGACTTACAATTCTAATCTCAACTTCCGTTGA MPNNRLSFDAEGSQLASEFGTNGFSFTLQIVLGGISFGHLHHINARRVPTQPVAARPCHVLWRRNCLRHHGYGIIVIGGACGYGNLFTNGYGTDTVALSSTLFNNGYACGTCFQIKCVQSKACYANVPFTTVTATNLCPPNWSQDSNAGGWCNPPRVHFDMAKPAFMKIALWKAGIVPVQYRRVPCVRKGGVRLSFQGNGYWLLVYVMNVGGGGDVYSMAVKGSKTGWITMSHNWGASYQAFSSLGGQCLSFRITSYTTRETITLWNVVPANWQVGLTYNSNLNFR Homology
BLAST of Spg003094 vs. NCBI nr
Match: XP_038875954.1 (expansin-A7-like [Benincasa hispida]) HSP 1 Score: 434.1 bits (1115), Expect = 9.3e-118 Identity = 199/210 (94.76%), Postives = 206/210 (98.10%), Query Frame = 0
BLAST of Spg003094 vs. NCBI nr
Match: XP_004144001.1 (expansin-A7 [Cucumis sativus] >KGN50161.1 hypothetical protein Csa_000294 [Cucumis sativus]) HSP 1 Score: 431.4 bits (1108), Expect = 6.0e-117 Identity = 197/210 (93.81%), Postives = 203/210 (96.67%), Query Frame = 0
BLAST of Spg003094 vs. NCBI nr
Match: XP_022969884.1 (expansin-A7-like [Cucurbita maxima]) HSP 1 Score: 431.4 bits (1108), Expect = 6.0e-117 Identity = 196/210 (93.33%), Postives = 204/210 (97.14%), Query Frame = 0
BLAST of Spg003094 vs. NCBI nr
Match: KAA0042813.1 (expansin-A7 [Cucumis melo var. makuwa]) HSP 1 Score: 429.9 bits (1104), Expect = 1.8e-116 Identity = 196/209 (93.78%), Postives = 203/209 (97.13%), Query Frame = 0
BLAST of Spg003094 vs. NCBI nr
Match: KAG6579465.1 (Expansin-A7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016933.1 Expansin-A7, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 428.7 bits (1101), Expect = 3.9e-116 Identity = 196/210 (93.33%), Postives = 203/210 (96.67%), Query Frame = 0
BLAST of Spg003094 vs. ExPASy Swiss-Prot
Match: Q9LN94 (Expansin-A7 OS=Arabidopsis thaliana OX=3702 GN=EXPA7 PE=3 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 8.2e-93 Identity = 155/210 (73.81%), Postives = 171/210 (81.43%), Query Frame = 0
BLAST of Spg003094 vs. ExPASy Swiss-Prot
Match: Q9LQ07 (Expansin-A18 OS=Arabidopsis thaliana OX=3702 GN=EXPA18 PE=2 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 3.8e-90 Identity = 152/226 (67.26%), Postives = 173/226 (76.55%), Query Frame = 0
BLAST of Spg003094 vs. ExPASy Swiss-Prot
Match: Q8W2X8 (Putative expansin-A30 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA30 PE=3 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.7e-82 Identity = 138/212 (65.09%), Postives = 166/212 (78.30%), Query Frame = 0
BLAST of Spg003094 vs. ExPASy Swiss-Prot
Match: O48818 (Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 1.6e-67 Identity = 116/211 (54.98%), Postives = 156/211 (73.93%), Query Frame = 0
BLAST of Spg003094 vs. ExPASy Swiss-Prot
Match: Q7G6Z2 (Expansin-A12 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA12 PE=2 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.3e-66 Identity = 119/211 (56.40%), Postives = 156/211 (73.93%), Query Frame = 0
BLAST of Spg003094 vs. ExPASy TrEMBL
Match: A0A6J1I3Y5 (Expansin OS=Cucurbita maxima OX=3661 GN=LOC111468948 PE=3 SV=1) HSP 1 Score: 431.4 bits (1108), Expect = 2.9e-117 Identity = 196/210 (93.33%), Postives = 204/210 (97.14%), Query Frame = 0
BLAST of Spg003094 vs. ExPASy TrEMBL
Match: A0A0A0KR05 (Expansin OS=Cucumis sativus OX=3659 GN=Csa_5G156210 PE=3 SV=1) HSP 1 Score: 431.4 bits (1108), Expect = 2.9e-117 Identity = 197/210 (93.81%), Postives = 203/210 (96.67%), Query Frame = 0
BLAST of Spg003094 vs. ExPASy TrEMBL
Match: A0A5A7THN7 (Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003170 PE=3 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 8.5e-117 Identity = 196/209 (93.78%), Postives = 203/209 (97.13%), Query Frame = 0
BLAST of Spg003094 vs. ExPASy TrEMBL
Match: A0A1S3ATJ0 (Expansin OS=Cucumis melo OX=3656 GN=LOC103482689 PE=3 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 2.5e-116 Identity = 195/209 (93.30%), Postives = 203/209 (97.13%), Query Frame = 0
BLAST of Spg003094 vs. ExPASy TrEMBL
Match: A0A6J1E3X3 (Expansin OS=Cucurbita moschata OX=3662 GN=LOC111430371 PE=3 SV=1) HSP 1 Score: 427.2 bits (1097), Expect = 5.5e-116 Identity = 195/210 (92.86%), Postives = 203/210 (96.67%), Query Frame = 0
BLAST of Spg003094 vs. TAIR 10
Match: AT1G12560.1 (expansin A7 ) HSP 1 Score: 341.7 bits (875), Expect = 5.9e-94 Identity = 155/210 (73.81%), Postives = 171/210 (81.43%), Query Frame = 0
BLAST of Spg003094 vs. TAIR 10
Match: AT1G62980.1 (expansin A18 ) HSP 1 Score: 332.8 bits (852), Expect = 2.7e-91 Identity = 152/226 (67.26%), Postives = 173/226 (76.55%), Query Frame = 0
BLAST of Spg003094 vs. TAIR 10
Match: AT2G39700.1 (expansin A4 ) HSP 1 Score: 257.7 bits (657), Expect = 1.1e-68 Identity = 116/211 (54.98%), Postives = 156/211 (73.93%), Query Frame = 0
BLAST of Spg003094 vs. TAIR 10
Match: AT3G55500.1 (expansin A16 ) HSP 1 Score: 254.6 bits (649), Expect = 9.4e-68 Identity = 117/211 (55.45%), Postives = 155/211 (73.46%), Query Frame = 0
BLAST of Spg003094 vs. TAIR 10
Match: AT2G37640.1 (Barwin-like endoglucanases superfamily protein ) HSP 1 Score: 253.4 bits (646), Expect = 2.1e-67 Identity = 119/211 (56.40%), Postives = 152/211 (72.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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