Spg003071 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg003071
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein cornichon homolog 4-like
Location	scaffold12: 38296436 .. 38297852 (-)
RNA-Seq Expression	Spg003071
Synteny	Spg003071

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATCGTTTCCTCGCCGGTGTTTCGCCGTTAGGTCTCGATTAAGGAGGCTGGTTGTTCGGGCTGTTGGTCTCGGTTTAGAGCACTGCAGTGTGCCTTGGTTTGTGCAACTAAATAGGCGAGAGGGTCGGTGTCTTTCCGGTAAAGCATCAGGCAGCGATTGTGTTGTGTGTCTCAGCATTCTCCGGTTAATCACAGGTGGCTTAGCTTGTTTTGCGCTGGGTTGTAGTCTATAAACACTAGCTATCCGTTTTTGCATGCTTACATGGGTTCATTGGGCTTGTGCTACAGCATAGATATCTCAATTCGGTTGTACCGTATTTATGATACAAGCATTCCCTACATTTGAATACTTGAATTGACATTCTGTATTGCTAATTGCCTGATACCATTGGTGAAACAATGTTGGAACTGAGGAACTTATGATGCTTTTAAAACTTGTTGCAGCTAATGTGCTTAGCTGATCTTGAGTTTGATTATATCAACCCTTATGACTCCTCATCACGGATAAACAAAGTGGTTGTACCTGAGTTCATCACTCAAGGAGTCTTGTGTATCGTCTATCTTTTAACAGGGCATTGGATTATGTCATTCTTTTGTGTGTCCTACCTCTATTACAATTTAAGATTGTAAGTTTATCTAATTCTTGCATCTTTGATTGGATTGTTTAAATTGAGAAGTATGGCAGCAGGCTATATAATTTTTTTAAAAAAAAGAGAGAGAAAAAACGAGGAGGTGAGGTAGGATTGCATAATTTTTAGTGGGGTATATGCGTTATATTGGTTGTCAATTTGATCTATCAGAACCTCATCTATTATTCTGGGCTCTGGATTCCAAATGAAGGACGAATTGTTTATTTTGAAAGAGAGGGTTTATCTCATATATAAAAAGAAGAGAGGGCTCATCATTCTCTGGTAAACCCTTGGTAGCCAAGTGCTTAGTGGATAGCGGGTGAAAACATCTAAGTATTGGACGCTCAAGCCTTTTACTTTGAATGTATGAATTGTTTTAAAGCACCAATATTCTCTTCTGAAATTTAGAATAATATCAATAGTTTTCAGATAAGTCAATGTGTCGAGATGGTTGAGAGTCTAAGGCGGTCTCATGGTTGGTTAGTCTCTTTGGAGATTCACACTACAGTAGTGTGACTGAAGCTAGTTTACAATGGTTATCAAGATAAACCAAACTGAAATATAGCATATTTGAGATTGGGTTGGTGAGCATATGGCTTAATACTCAACTTGTTCGTTGCTGGTATTCATGGCAAGCTTCCTGATCTGTCTGATGTGTGTTTTTCTCATGATTACCAGGTACAGTCAGCGAAAGCACCTGGTAGATGTTCATCAGATTTATGAGTTGCATGAATCTCGAGCCCAAATTAAACCAAATATTTTGCCATTTACTCTGCCCCCTTAA

mRNA sequence

ATGAGATCGTTTCCTCGCCGGTGTTTCGCCGTTAGGTCTCGATTAAGGAGGCTGGTTGTTCGGGCTGTTGGTCTCGGTTTAGAGCACTGCAGTGTGCCTTGGTTTGTGCAACTAAATAGGCGAGAGGGTCGGTGTCTTTCCGGTAAAGCATCAGGCAGCGATTGTGTTCTAATGTGCTTAGCTGATCTTGAGTTTGATTATATCAACCCTTATGACTCCTCATCACGGATAAACAAAGTGGTTGTACCTGAGTTCATCACTCAAGGAGTCTTGTGTATCGTCTATCTTTTAACAGGGCATTGGATTATGTCATTCTTTTGTGTGTCCTACCTCTATTACAATTTAAGATTGTACAGTCAGCGAAAGCACCTGGTAGATGTTCATCAGATTTATGAGTTGCATGAATCTCGAGCCCAAATTAAACCAAATATTTTGCCATTTACTCTGCCCCCTTAA

Coding sequence (CDS)

ATGAGATCGTTTCCTCGCCGGTGTTTCGCCGTTAGGTCTCGATTAAGGAGGCTGGTTGTTCGGGCTGTTGGTCTCGGTTTAGAGCACTGCAGTGTGCCTTGGTTTGTGCAACTAAATAGGCGAGAGGGTCGGTGTCTTTCCGGTAAAGCATCAGGCAGCGATTGTGTTCTAATGTGCTTAGCTGATCTTGAGTTTGATTATATCAACCCTTATGACTCCTCATCACGGATAAACAAAGTGGTTGTACCTGAGTTCATCACTCAAGGAGTCTTGTGTATCGTCTATCTTTTAACAGGGCATTGGATTATGTCATTCTTTTGTGTGTCCTACCTCTATTACAATTTAAGATTGTACAGTCAGCGAAAGCACCTGGTAGATGTTCATCAGATTTATGAGTTGCATGAATCTCGAGCCCAAATTAAACCAAATATTTTGCCATTTACTCTGCCCCCTTAA

Protein sequence

MRSFPRRCFAVRSRLRRLVVRAVGLGLEHCSVPWFVQLNRREGRCLSGKASGSDCVLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIYELHESRAQIKPNILPFTLPP

Homology

[Close]

BLAST of Spg003071 vs. NCBI nr
Match: XP_023532889.1 (protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >XP_023532890.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >KAG6606147.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 145.2 bits (365), Expect = 4.6e-31
Identity = 69/75 (92.00%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCI YLLTGHWIMSFFCV YLYYNLR
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLTGHWIMSFFCVPYLYYNLR 84

Query: 117 LYSQRKHLVDVHQIY 132
           LY+QRKHLVDV +I+
Sbjct: 85  LYTQRKHLVDVTEIF 99

[Close]

BLAST of Spg003071 vs. NCBI nr
Match: XP_022996131.1 (protein cornichon homolog 4-like [Cucurbita maxima] >XP_022996132.1 protein cornichon homolog 4-like [Cucurbita maxima])

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-30
Identity = 68/75 (90.67%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCI YLLTGHWIMSFFC+ YLYYNLR
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLTGHWIMSFFCLPYLYYNLR 84

Query: 117 LYSQRKHLVDVHQIY 132
           LY+QRKHLVDV +I+
Sbjct: 85  LYTQRKHLVDVTEIF 99

[Close]

BLAST of Spg003071 vs. NCBI nr
Match: XP_022957749.1 (protein cornichon homolog 4-like [Cucurbita moschata])

HSP 1 Score: 143.3 bits (360), Expect = 1.7e-30
Identity = 67/75 (89.33%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCI YLLTGHWIMSFFCV YLYYNLR
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVIPEFITQGVLCIFYLLTGHWIMSFFCVPYLYYNLR 84

Query: 117 LYSQRKHLVDVHQIY 132
           LY+QR+HLVDV +I+
Sbjct: 85  LYTQREHLVDVTEIF 99

[Close]

BLAST of Spg003071 vs. NCBI nr
Match: XP_022922295.1 (protein cornichon homolog 4-like [Cucurbita moschata] >XP_023551139.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >KAG6579448.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016921.1 Protein cornichon-like 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 141.0 bits (354), Expect = 8.6e-30
Identity = 66/75 (88.00%), Postives = 71/75 (94.67%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCI YLLTGHWIMS FCV YLYYN+R
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLCIFYLLTGHWIMSLFCVPYLYYNIR 84

Query: 117 LYSQRKHLVDVHQIY 132
           LY+QRKHLVDV +I+
Sbjct: 85  LYTQRKHLVDVTEIF 99

[Close]

BLAST of Spg003071 vs. NCBI nr
Match: XP_038907022.1 (protein cornichon homolog 4-like [Benincasa hispida])

HSP 1 Score: 141.0 bits (354), Expect = 8.6e-30
Identity = 66/75 (88.00%), Postives = 71/75 (94.67%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCI YLL+GHWIMS FC+ YLYYNLR
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCIPYLYYNLR 84

Query: 117 LYSQRKHLVDVHQIY 132
           LY+QRKHLVDV +I+
Sbjct: 85  LYTQRKHLVDVTEIF 99

[Close]

BLAST of Spg003071 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 8.4e-28
Identity = 56/77 (72.73%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+ YLLTGHW M+  C+ YLYYN  
Sbjct: 17  LVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFH 76

Query: 117 LYSQRKHLVDVHQIYEL 134
           LYS+R+HLVDV +I+ L
Sbjct: 77  LYSKRQHLVDVTEIFNL 93

[Close]

BLAST of Spg003071 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 8.4e-28
Identity = 56/77 (72.73%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+ YLLTGHW M+  C+ YLYYN  
Sbjct: 25  LVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFH 84

Query: 117 LYSQRKHLVDVHQIYEL 134
           LYS+R+HLVDV +I+ L
Sbjct: 85  LYSKRQHLVDVTEIFNL 101

[Close]

BLAST of Spg003071 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.3e-24
Identity = 51/77 (66.23%), Postives = 63/77 (81.82%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           L+ LADLEFDYINPYDS+SRIN VV+PE I QG LC+ YL+TGHW M+  CV YLYYN  
Sbjct: 25  LISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYNFH 84

Query: 117 LYSQRKHLVDVHQIYEL 134
           LYS+++HL+DV +I+ L
Sbjct: 85  LYSRKQHLIDVTEIFNL 101

[Close]

BLAST of Spg003071 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-21
Identity = 46/79 (58.23%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           L CLADLEFD INPYD SSRIN++V+PEF  QG+LC+ Y+LTGHW M+   + +L+YN+R
Sbjct: 25  LTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYYILTGHWFMAVLSLPHLFYNIR 84

Query: 117 LYSQRKHLVDVHQIYELHE 136
           LY +R+HL DV ++Y  ++
Sbjct: 85  LYMKREHLADVTELYNTNK 103

[Close]

BLAST of Spg003071 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.5e-16
Identity = 35/75 (46.67%), Postives = 57/75 (76.00%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           ++CL DLE DY+NP+++S+RIN++V+PEFI QG LC+++LLT HW+     V    Y+  
Sbjct: 26  VICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYHAM 85

Query: 117 LYSQRKHLVDVHQIY 132
           LY +R++L+DV +++
Sbjct: 86  LYKERRYLIDVTEVF 100

[Close]

BLAST of Spg003071 vs. ExPASy TrEMBL
Match: A0A6J1K131 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111491445 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 4.9e-31
Identity = 68/75 (90.67%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCI YLLTGHWIMSFFC+ YLYYNLR
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLTGHWIMSFFCLPYLYYNLR 84

Query: 117 LYSQRKHLVDVHQIY 132
           LY+QRKHLVDV +I+
Sbjct: 85  LYTQRKHLVDVTEIF 99

[Close]

BLAST of Spg003071 vs. ExPASy TrEMBL
Match: A0A6J1H2W0 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111459200 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 8.4e-31
Identity = 67/75 (89.33%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCI YLLTGHWIMSFFCV YLYYNLR
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVIPEFITQGVLCIFYLLTGHWIMSFFCVPYLYYNLR 84

Query: 117 LYSQRKHLVDVHQIY 132
           LY+QR+HLVDV +I+
Sbjct: 85  LYTQREHLVDVTEIF 99

[Close]

BLAST of Spg003071 vs. ExPASy TrEMBL
Match: A0A6J1E8A9 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430316 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 4.2e-30
Identity = 66/75 (88.00%), Postives = 71/75 (94.67%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCI YLLTGHWIMS FCV YLYYN+R
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLCIFYLLTGHWIMSLFCVPYLYYNIR 84

Query: 117 LYSQRKHLVDVHQIY 132
           LY+QRKHLVDV +I+
Sbjct: 85  LYTQRKHLVDVTEIF 99

[Close]

BLAST of Spg003071 vs. ExPASy TrEMBL
Match: A0A6J1I130 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111468923 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.2e-29
Identity = 65/75 (86.67%), Postives = 70/75 (93.33%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLC  YLLTGHWIMS FCV YLYYN+R
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCFFYLLTGHWIMSLFCVPYLYYNIR 84

Query: 117 LYSQRKHLVDVHQIY 132
           LY+QRKHLVDV +I+
Sbjct: 85  LYTQRKHLVDVTEIF 99

[Close]

BLAST of Spg003071 vs. ExPASy TrEMBL
Match: A0A6J1DX47 (protein cornichon homolog 4 OS=Momordica charantia OX=3673 GN=LOC111024886 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.1e-29
Identity = 65/75 (86.67%), Postives = 70/75 (93.33%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCI YLLTGHWIMS FC  YLYYNLR
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLR 84

Query: 117 LYSQRKHLVDVHQIY 132
           LY+QR+HLVDV +I+
Sbjct: 85  LYTQRQHLVDVTEIF 99

[Close]

BLAST of Spg003071 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 124.8 bits (312), Expect = 5.9e-29
Identity = 56/77 (72.73%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+ YLLTGHW M+  C+ YLYYN  
Sbjct: 17  LVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFH 76

Query: 117 LYSQRKHLVDVHQIYEL 134
           LYS+R+HLVDV +I+ L
Sbjct: 77  LYSKRQHLVDVTEIFNL 93

[Close]

BLAST of Spg003071 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 124.8 bits (312), Expect = 5.9e-29
Identity = 56/77 (72.73%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+ YLLTGHW M+  C+ YLYYN  
Sbjct: 25  LVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFH 84

Query: 117 LYSQRKHLVDVHQIYEL 134
           LYS+R+HLVDV +I+ L
Sbjct: 85  LYSKRQHLVDVTEIFNL 101

[Close]

BLAST of Spg003071 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 112.8 bits (281), Expect = 2.3e-25
Identity = 51/77 (66.23%), Postives = 63/77 (81.82%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           L+ LADLEFDYINPYDS+SRIN VV+PE I QG LC+ YL+TGHW M+  CV YLYYN  
Sbjct: 25  LISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYNFH 84

Query: 117 LYSQRKHLVDVHQIYEL 134
           LYS+++HL+DV +I+ L
Sbjct: 85  LYSRKQHLIDVTEIFNL 101

[Close]

BLAST of Spg003071 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 104.4 bits (259), Expect = 8.3e-23
Identity = 46/79 (58.23%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           L CLADLEFD INPYD SSRIN++V+PEF  QG+LC+ Y+LTGHW M+   + +L+YN+R
Sbjct: 25  LTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYYILTGHWFMAVLSLPHLFYNIR 84

Query: 117 LYSQRKHLVDVHQIYELHE 136
           LY +R+HL DV ++Y  ++
Sbjct: 85  LYMKREHLADVTELYNTNK 103

[Close]

BLAST of Spg003071 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 86.7 bits (213), Expect = 1.8e-17
Identity = 35/75 (46.67%), Postives = 57/75 (76.00%), Query Frame = 0


Query: 57  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLR 116
           ++CL DLE DY+NP+++S+RIN++V+PEFI QG LC+++LLT HW+     V    Y+  
Sbjct: 26  VICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYHAM 85

Query: 117 LYSQRKHLVDVHQIY 132
           LY +R++L+DV +++
Sbjct: 86  LYKERRYLIDVTEVF 100

The following BLAST results are available for this feature:

BLAST of Spg003071 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532889.1	4.6e-31	92.00	protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >XP_023532890.1 pr...	[more]
XP_022996131.1	1.0e-30	90.67	protein cornichon homolog 4-like [Cucurbita maxima] >XP_022996132.1 protein corn...	[more]
XP_022957749.1	1.7e-30	89.33	protein cornichon homolog 4-like [Cucurbita moschata]	[more]
XP_022922295.1	8.6e-30	88.00	protein cornichon homolog 4-like [Cucurbita moschata] >XP_023551139.1 protein co...	[more]
XP_038907022.1	8.6e-30	88.00	protein cornichon homolog 4-like [Benincasa hispida]	[more]

BLAST of Spg003071 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3EDD7	8.4e-28	72.73	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q84W04	8.4e-28	72.73	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q8GWT5	3.3e-24	66.23	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
Q9SZ74	1.2e-21	58.23	Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV...	[more]
Q9C7D7	2.5e-16	46.67	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]

BLAST of Spg003071 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K131	4.9e-31	90.67	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111491445 PE=...	[more]
A0A6J1H2W0	8.4e-31	89.33	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111459200 P...	[more]
A0A6J1E8A9	4.2e-30	88.00	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430316 P...	[more]
A0A6J1I130	1.2e-29	86.67	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111468923 PE=...	[more]
A0A6J1DX47	2.1e-29	86.67	protein cornichon homolog 4 OS=Momordica charantia OX=3673 GN=LOC111024886 PE=3 ...	[more]

BLAST of Spg003071 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12340.1	5.9e-29	72.73	Cornichon family protein	[more]
AT1G12390.1	5.9e-29	72.73	Cornichon family protein	[more]
AT1G62880.1	2.3e-25	66.23	Cornichon family protein	[more]
AT4G12090.1	8.3e-23	58.23	Cornichon family protein	[more]
AT3G12180.1	1.8e-17	46.67	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 55..141 e-value: 5.2E-21 score: 85.8
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 56..134 e-value: 5.4E-27 score: 94.5
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 56..134
None	No IPR available	PANTHER	PTHR12290:SF30	PROTEIN CORNICHON HOMOLOG 2-RELATED	coord: 56..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg003071.1	Spg003071.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane