Spg002963 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGCAATGAAGAAGCTTTTCTTCTTCACATTCTTCCTTTGCTTCCTTCTCTTCACTTCTTCCTTTATAGACAATGTCATCGCCAAGCCCGGTAAGTCGTCGTCGTCGTCATCAAATGTTTTCGTCGATTTTTGAAGTTTGGGGTCTAACTTTCTAACTTCAACATTTTTTTTCTGTATTGTTTGGTTGTTTTGTGAAGTGTTTTGTGACAAAAAGTGCAAGAAGAGATGCTCAAAGGCAGGAGTGAAGGATAGATGCATAAAGTATTGTGGGATTTGCTGTGGCTTTTGCAAGTGTGTTCCTTCTGGGACTTATGGGAACAAACATGAGTGCCCTTGCTATAGGGACATGAGGAGTTCTAAGGGCAGACCCAAGTGCCCTTGAGTGTTGACATCACATGCCTCTTCAACTAAAGCCATTTGCATGTCTTTAGATTTCTTGTGTTTGATATACTATTGGTACCCGTGCAAGTATTCGAAAAATTTGATCAATCAAACTTTGAGTTGAGTTGGATTTTGAGTTTGTGTCAGTTGAATTAGGTTTAAGTTACGTTAAATTCTTAACGAGAGTTAAAGTTTATTCTTGG ATGAAGAAGCTTTTCTTCTTCACATTCTTCCTTTGCTTCCTTCTCTTCACTTCTTCCTTTATAGACAATGTCATCGCCAAGCCCGTGTTTTGTGACAAAAAGTGCAAGAAGAGATGCTCAAAGGCAGGAGTGAAGGATAGATGCATAAAGTATTGTGGGATTTGCTGTGGCTTTTGCAAGTGTGTTCCTTCTGGGACTTATGGGAACAAACATGAGTGCCCTTGCTATAGGGACATGAGGAGTTCTAAGGGCAGACCCAAGTGCCCTTGA ATGAAGAAGCTTTTCTTCTTCACATTCTTCCTTTGCTTCCTTCTCTTCACTTCTTCCTTTATAGACAATGTCATCGCCAAGCCCGTGTTTTGTGACAAAAAGTGCAAGAAGAGATGCTCAAAGGCAGGAGTGAAGGATAGATGCATAAAGTATTGTGGGATTTGCTGTGGCTTTTGCAAGTGTGTTCCTTCTGGGACTTATGGGAACAAACATGAGTGCCCTTGCTATAGGGACATGAGGAGTTCTAAGGGCAGACCCAAGTGCCCTTGA MKKLFFFTFFLCFLLFTSSFIDNVIAKPVFCDKKCKKRCSKAGVKDRCIKYCGICCGFCKCVPSGTYGNKHECPCYRDMRSSKGRPKCP Homology
BLAST of Spg002963 vs. NCBI nr
Match: KAA0044354.1 (peamaclein-like [Cucumis melo var. makuwa] >TYK29483.1 peamaclein-like [Cucumis melo var. makuwa]) HSP 1 Score: 184.1 bits (466), Expect = 5.2e-43 Identity = 83/89 (93.26%), Postives = 86/89 (96.63%), Query Frame = 0
BLAST of Spg002963 vs. NCBI nr
Match: KAE8649034.1 (hypothetical protein Csa_014887 [Cucumis sativus]) HSP 1 Score: 183.0 bits (463), Expect = 1.2e-42 Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0
BLAST of Spg002963 vs. NCBI nr
Match: XP_038906246.1 (peamaclein-like [Benincasa hispida]) HSP 1 Score: 173.3 bits (438), Expect = 9.2e-40 Identity = 80/89 (89.89%), Postives = 82/89 (92.13%), Query Frame = 0
BLAST of Spg002963 vs. NCBI nr
Match: XP_022149266.1 (peamaclein-like [Momordica charantia]) HSP 1 Score: 172.6 bits (436), Expect = 1.6e-39 Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 0
BLAST of Spg002963 vs. NCBI nr
Match: XP_002313889.2 (peamaclein [Populus trichocarpa] >PNT20456.1 hypothetical protein POPTR_009G092600 [Populus trichocarpa]) HSP 1 Score: 146.7 bits (369), Expect = 9.2e-32 Identity = 65/89 (73.03%), Postives = 76/89 (85.39%), Query Frame = 0
BLAST of Spg002963 vs. ExPASy Swiss-Prot
Match: Q948Z4 (Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 9.9e-29 Identity = 58/87 (66.67%), Postives = 65/87 (74.71%), Query Frame = 0
BLAST of Spg002963 vs. ExPASy Swiss-Prot
Match: P86888 (Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 5.6e-24 Identity = 45/60 (75.00%), Postives = 51/60 (85.00%), Query Frame = 0
BLAST of Spg002963 vs. ExPASy Swiss-Prot
Match: O82328 (Gibberellin-regulated protein 7 OS=Arabidopsis thaliana OX=3702 GN=GASA7 PE=3 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 4.8e-23 Identity = 44/60 (73.33%), Postives = 51/60 (85.00%), Query Frame = 0
BLAST of Spg002963 vs. ExPASy Swiss-Prot
Match: Q8LFM2 (Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 5.8e-21 Identity = 49/77 (63.64%), Postives = 53/77 (68.83%), Query Frame = 0
BLAST of Spg002963 vs. ExPASy Swiss-Prot
Match: O80641 (Gibberellin-regulated protein 8 OS=Arabidopsis thaliana OX=3702 GN=At2g39540 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 3.8e-20 Identity = 49/87 (56.32%), Postives = 58/87 (66.67%), Query Frame = 0
BLAST of Spg002963 vs. ExPASy TrEMBL
Match: A0A5D3E0A6 (Peamaclein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00810 PE=3 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 2.5e-43 Identity = 83/89 (93.26%), Postives = 86/89 (96.63%), Query Frame = 0
BLAST of Spg002963 vs. ExPASy TrEMBL
Match: A0A0A0KV42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001520 PE=3 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 4.0e-41 Identity = 82/87 (94.25%), Postives = 83/87 (95.40%), Query Frame = 0
BLAST of Spg002963 vs. ExPASy TrEMBL
Match: A0A6J1D7V8 (peamaclein-like OS=Momordica charantia OX=3673 GN=LOC111017729 PE=3 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 7.6e-40 Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 0
BLAST of Spg002963 vs. ExPASy TrEMBL
Match: B9HS89 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G092600 PE=3 SV=2) HSP 1 Score: 146.7 bits (369), Expect = 4.5e-32 Identity = 65/89 (73.03%), Postives = 76/89 (85.39%), Query Frame = 0
BLAST of Spg002963 vs. ExPASy TrEMBL
Match: A0A4U5QA14 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000132620 PE=3 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 7.6e-32 Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 0
BLAST of Spg002963 vs. TAIR 10
Match: AT2G14900.1 (Gibberellin-regulated family protein ) HSP 1 Score: 108.2 bits (269), Expect = 3.4e-24 Identity = 44/60 (73.33%), Postives = 51/60 (85.00%), Query Frame = 0
BLAST of Spg002963 vs. TAIR 10
Match: AT5G59845.1 (Gibberellin-regulated family protein ) HSP 1 Score: 101.3 bits (251), Expect = 4.1e-22 Identity = 49/77 (63.64%), Postives = 53/77 (68.83%), Query Frame = 0
BLAST of Spg002963 vs. TAIR 10
Match: AT2G39540.1 (Gibberellin-regulated family protein ) HSP 1 Score: 98.6 bits (244), Expect = 2.7e-21 Identity = 49/87 (56.32%), Postives = 58/87 (66.67%), Query Frame = 0
BLAST of Spg002963 vs. TAIR 10
Match: AT1G10588.1 (Gibberellin-regulated family protein ) HSP 1 Score: 91.7 bits (226), Expect = 3.3e-19 Identity = 49/90 (54.44%), Postives = 55/90 (61.11%), Query Frame = 0
BLAST of Spg002963 vs. TAIR 10
Match: AT1G10588.2 (Gibberellin-regulated family protein ) HSP 1 Score: 87.8 bits (216), Expect = 4.7e-18 Identity = 48/90 (53.33%), Postives = 56/90 (62.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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