Spg002956 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg002956
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Sterol regulatory element-binding protein cleavage-activating protein, putative
Location	scaffold6: 1152024 .. 1152596 (+)
RNA-Seq Expression	Spg002956
Synteny	Spg002956

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAACTCTGGTGTGTTCCTTTCGTCAAGCTCTCGACCTCTCGAAGCATCCACCATGGAAACTGAGAAGCCGAATCAACAACTCAACACTCACGAAGAATCTCAGCAATTTCACAAGAACATCCAGACGCCAGATCCAACTAAACGCCAAGGGCTTCACAGGTTCTCCGGCGACGGGGAAAGACAGAGAAACCGCCGCGGAAAAACTTCCCGGCCAAAACAGCAGCAAAGACGACGGGGGCGACTACGACGATGAAATTCCAGAGGCCGTAGCCAAGAGGATCATAACGAGAATCTTGGCTTTCGTCGGAATTCCGATGGCGTTCGGTGTGACGTTACTGAAGATTTTCGAGGCGATCAAGGTGCAGAACCTGTGGGATGTGCCGATCTGGCTGCCATTTTTGACGATATTTTTGACATTTGGAGCTTCGACGATGGGAATTGCTTACGGGACGTTATCGGCGAGTTTGGATCCGGAGAAGGAAGGGACTCTGTTTGGATGGGAACAGGTGGAGAGGAATTGGGTAGAGATGTGGAAGGAGGAAGATGAAGCCAATCGCCGAGGAAACTGA

mRNA sequence

ATGAAAACTCTGGTGTGTTCCTTTCGTCAAGCTCTCGACCTCTCGAAGCATCCACCATGGAAACTGAGAAGCCGAATCAACAACTCAACACTCACGAAGAATCTCAGCAATTTCACAAGAACATCCAGACGCCAGATCCAACTAAACGCCAAGGGCTTCACAGGTTCTCCGGCGACGGGGAAAGACAGAGAAACCGCCGCGGAAAAACTTCCCGGCCAAAACAGCAGCAAAGACGACGGGGGCGACTACGACGATGAAATTCCAGAGGCCGTAGCCAAGAGGATCATAACGAGAATCTTGGCTTTCGTCGGAATTCCGATGGCGTTCGGTGTGACGTTACTGAAGATTTTCGAGGCGATCAAGGTGCAGAACCTGTGGGATGTGCCGATCTGGCTGCCATTTTTGACGATATTTTTGACATTTGGAGCTTCGACGATGGGAATTGCTTACGGGACGTTATCGGCGAGTTTGGATCCGGAGAAGGAAGGGACTCTGTTTGGATGGGAACAGGTGGAGAGGAATTGGGTAGAGATGTGGAAGGAGGAAGATGAAGCCAATCGCCGAGGAAACTGA

Coding sequence (CDS)

ATGAAAACTCTGGTGTGTTCCTTTCGTCAAGCTCTCGACCTCTCGAAGCATCCACCATGGAAACTGAGAAGCCGAATCAACAACTCAACACTCACGAAGAATCTCAGCAATTTCACAAGAACATCCAGACGCCAGATCCAACTAAACGCCAAGGGCTTCACAGGTTCTCCGGCGACGGGGAAAGACAGAGAAACCGCCGCGGAAAAACTTCCCGGCCAAAACAGCAGCAAAGACGACGGGGGCGACTACGACGATGAAATTCCAGAGGCCGTAGCCAAGAGGATCATAACGAGAATCTTGGCTTTCGTCGGAATTCCGATGGCGTTCGGTGTGACGTTACTGAAGATTTTCGAGGCGATCAAGGTGCAGAACCTGTGGGATGTGCCGATCTGGCTGCCATTTTTGACGATATTTTTGACATTTGGAGCTTCGACGATGGGAATTGCTTACGGGACGTTATCGGCGAGTTTGGATCCGGAGAAGGAAGGGACTCTGTTTGGATGGGAACAGGTGGAGAGGAATTGGGTAGAGATGTGGAAGGAGGAAGATGAAGCCAATCGCCGAGGAAACTGA

Protein sequence

MKTLVCSFRQALDLSKHPPWKLRSRINNSTLTKNLSNFTRTSRRQIQLNAKGFTGSPATGKDRETAAEKLPGQNSSKDDGGDYDDEIPEAVAKRIITRILAFVGIPMAFGVTLLKIFEAIKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVERNWVEMWKEEDEANRRGN

Homology

[Close]

BLAST of Spg002956 vs. NCBI nr
Match: XP_023541387.1 (uncharacterized protein PAM68-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.8 bits (782), Expect = 2.5e-79
Identity = 154/190 (81.05%), Postives = 166/190 (87.37%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSKHPPWKLRSRINNSTLTKNLSNFTRTSRRQIQLNAKGFTGSPATG 60
           MK LVCSFR ALDLSK PPWK RSRI++ST TKNL  FTRTSR QIQLNAKGFTGSPAT 
Sbjct: 1   MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATA 60

Query: 61  KDRETAAEKLPGQNSSKDDGGDYDDEIPEAVAKRIITRILAFVGIPMAFGVTLLKIFEAI 120
           KDRETA +K  GQN+S+  GG  DDEIPEAVAKRIITRILAFVG+PMAFGVTL+KI EA+
Sbjct: 61  KDRETAVKKPSGQNNSRGGGGGDDDEIPEAVAKRIITRILAFVGVPMAFGVTLVKILEAV 120

Query: 121 KVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVERNWVEMWK 180
             Q LW VPIWLPFLTIFLTFGASTMGIAYGTLS SLDPEKEGTLFGW++ ++NWVEMWK
Sbjct: 121 HEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK 180

Query: 181 EEDEANRRGN 191
           EEDEANR GN
Sbjct: 181 EEDEANRGGN 190

[Close]

BLAST of Spg002956 vs. NCBI nr
Match: KAG7013265.1 (putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305.1 bits (780), Expect = 4.3e-79
Identity = 156/190 (82.11%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSKHPPWKLRSRINNSTLTKNLSNFTRTSRRQIQLNAKGFTGSPATG 60
           MK LVCSFR ALDLSK PPWK RSRI++ST TKNL  FTRTSR QIQLNAKGFTGSPAT 
Sbjct: 1   MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATA 60

Query: 61  KDRETAAEKLPGQNSSKDDGGDYDDEIPEAVAKRIITRILAFVGIPMAFGVTLLKIFEAI 120
           KDRETA +K  GQN+S+D GG  DDEIPEAVAKRIITRILAFVGIPMAFGVTL+KI EA+
Sbjct: 61  KDRETAVKKPSGQNNSRDGGGG-DDEIPEAVAKRIITRILAFVGIPMAFGVTLVKILEAV 120

Query: 121 KVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVERNWVEMWK 180
             Q LW VPIWLPFLTIFLTFGASTMGIAYGTLS SLDPEKEGTLFGW++ ++NWVEMWK
Sbjct: 121 HEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK 180

Query: 181 EEDEANRRGN 191
           EEDEANR GN
Sbjct: 181 EEDEANRGGN 189

[Close]

BLAST of Spg002956 vs. NCBI nr
Match: XP_022944901.1 (uncharacterized protein PAM68-like [Cucurbita moschata])

HSP 1 Score: 304.7 bits (779), Expect = 5.7e-79
Identity = 155/190 (81.58%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSKHPPWKLRSRINNSTLTKNLSNFTRTSRRQIQLNAKGFTGSPATG 60
           MK LVCSFR AL LSK PPWK RSRI++ST TKNL  FTRTSR QIQLNAKGFTGSPAT 
Sbjct: 1   MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATA 60

Query: 61  KDRETAAEKLPGQNSSKDDGGDYDDEIPEAVAKRIITRILAFVGIPMAFGVTLLKIFEAI 120
           KDRETA +K  GQN+S+D GGD DDEIPEAVAKRIITRILAFVG+PMAFGVTL+KI EA+
Sbjct: 61  KDRETAVKKPSGQNNSRDGGGD-DDEIPEAVAKRIITRILAFVGVPMAFGVTLVKILEAV 120

Query: 121 KVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVERNWVEMWK 180
             Q LW VPIWLPFLTIFLTFGASTMGIAYGTLS SLDPEKEGTLFGW++ ++NWVEMWK
Sbjct: 121 HEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK 180

Query: 181 EEDEANRRGN 191
           EEDEANR GN
Sbjct: 181 EEDEANRGGN 189

[Close]

BLAST of Spg002956 vs. NCBI nr
Match: KAG6574203.1 (putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 304.3 bits (778), Expect = 7.4e-79
Identity = 156/191 (81.68%), Postives = 167/191 (87.43%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSKHPPWKLRSRINNSTLTKNLSNFTRTSRRQIQLNAKGFTGSPATG 60
           MK LVCSFR AL LSK PPWK RSRI++ST TKNL  FTRTSR QIQLNAKGFTGSPAT 
Sbjct: 1   MKALVCSFRHALHLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATA 60

Query: 61  KDRETAAEKLPGQNSSKD-DGGDYDDEIPEAVAKRIITRILAFVGIPMAFGVTLLKIFEA 120
           KDRETA +K  GQN+S+D  GGD DDEIPEAVAKRIITRILAFVGIPMAFGVTL+KI EA
Sbjct: 61  KDRETAVKKPSGQNNSRDGGGGDDDDEIPEAVAKRIITRILAFVGIPMAFGVTLVKILEA 120

Query: 121 IKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVERNWVEMW 180
           +  Q LW VPIWLPFLTIFLTFGASTMGIAYGTLS SLDPEKEGTLFGW++ ++NWVEMW
Sbjct: 121 VHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMW 180

Query: 181 KEEDEANRRGN 191
           KEEDEANR GN
Sbjct: 181 KEEDEANRGGN 191

[Close]

BLAST of Spg002956 vs. NCBI nr
Match: XP_022968628.1 (uncharacterized protein PAM68-like [Cucurbita maxima])

HSP 1 Score: 301.2 bits (770), Expect = 6.3e-78
Identity = 156/190 (82.11%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSKHPPWKLRSRINNSTLTKNLSNFTRTSRRQIQLNAKGFTGSPATG 60
           MK LVCSFR ALDLSK PPWK RSRI+NST TKNL  FT TSR QIQLNAKGFTGSPAT 
Sbjct: 1   MKALVCSFRHALDLSKPPPWKQRSRIDNSTTTKNLRVFTGTSRGQIQLNAKGFTGSPATA 60

Query: 61  KDRETAAEKLPGQNSSKDDGGDYDDEIPEAVAKRIITRILAFVGIPMAFGVTLLKIFEAI 120
           KDRETA +KL  QN+S+ DGGD DDEIPEAVAKRIITRILAFVGIPMAFGVTL+KI EA+
Sbjct: 61  KDRETAVKKLSDQNNSR-DGGD-DDEIPEAVAKRIITRILAFVGIPMAFGVTLVKILEAV 120

Query: 121 KVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVERNWVEMWK 180
             Q LW VPIWLPFLTIFLTFGASTMGIAYGTLS SLDPEKEGTLFGW++ ++NWVEMWK
Sbjct: 121 HEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK 180

Query: 181 EEDEANRRGN 191
           EEDEANR G+
Sbjct: 181 EEDEANRGGD 188

[Close]

BLAST of Spg002956 vs. ExPASy Swiss-Prot
Match: Q9LTD9 (Uncharacterized protein PAM68-like OS=Arabidopsis thaliana OX=3702 GN=At5g52780 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.4e-26
Identity = 73/183 (39.89%), Postives = 109/183 (59.56%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSKHPPWKLRSRINN-STLTKNLSNFTRTSRRQIQLNAKGFTGSPAT 60
           M+ L+CS R  L LS      ++++ +N  TL  N  N  R   + +    KGF  S  +
Sbjct: 1   MRALLCSHR-LLPLSSLSRTTVKTKSHNPKTLYPN--NKPRWESK-LHAGPKGFQSSRTS 60

Query: 61  GKDRETAAEKLPGQNSSKDDGGDYDDEIPEAVAKRIITRILAFVGIPMAFGVTLLKIFEA 120
            K         PG+    D   + D  IP+ V +R++ RI+  VG P+  GV +LK+ E 
Sbjct: 61  EK---------PGR---PDPDPEDDPPIPQEVFERMMGRIVVSVGTPLGLGVAILKVLEV 120

Query: 121 IKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVERNWVEMW 180
           +K +N+WDVP+W+P+LT  +TFG+S +GIAYG+LS +LDP K  +LFG ++ + NWVEMW
Sbjct: 121 LKDRNVWDVPLWVPYLTTLVTFGSSALGIAYGSLSTNLDPAKTNSLFGLKEAKENWVEMW 167

Query: 181 KEE 183
           KE+
Sbjct: 181 KED 167

[Close]

BLAST of Spg002956 vs. ExPASy Swiss-Prot
Match: O49668 (Protein PAM68, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM68 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.4e-18
Identity = 56/171 (32.75%), Postives = 89/171 (52.05%), Query Frame = 0


Query: 21  KLRSRINNSTLTKNLSNFTRTSRRQIQLNA-KGFTGSPATGKDRETAAEKLPGQNSSKDD 80
           K +S++  S    N    +R +     +N+ KGF   P   K +++   K   Q+   DD
Sbjct: 37  KTKSQVPKSITCINRLEISRIAPLHATMNSPKGF--GPPPKKTKKSKKPKPGNQSDEDDD 96

Query: 81  GGDYDDE----------IPEAVAKRIITRILAFVGIPMAFGVTLLKIFEAIKVQNLWDVP 140
             D DD+          IPE V  R+I+R+   VG+P+  G+     F  +KV    DVP
Sbjct: 97  DEDEDDDDEEDERERGVIPEIVTNRMISRMGFTVGLPLFIGLLFFPFFYYLKVGLKVDVP 156

Query: 141 IWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVERNWVEMWK 181
            W+PF+  F+ FG +  G++YG +S+S DP +EG+L GW + ++NW   W+
Sbjct: 157 TWVPFIVSFVFFGTALAGVSYGIVSSSWDPLREGSLLGWNEAKKNWPVFWQ 205

[Close]

BLAST of Spg002956 vs. ExPASy TrEMBL
Match: A0A6J1FZC0 (uncharacterized protein PAM68-like OS=Cucurbita moschata OX=3662 GN=LOC111449293 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.7e-79
Identity = 155/190 (81.58%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSKHPPWKLRSRINNSTLTKNLSNFTRTSRRQIQLNAKGFTGSPATG 60
           MK LVCSFR AL LSK PPWK RSRI++ST TKNL  FTRTSR QIQLNAKGFTGSPAT 
Sbjct: 1   MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATA 60

Query: 61  KDRETAAEKLPGQNSSKDDGGDYDDEIPEAVAKRIITRILAFVGIPMAFGVTLLKIFEAI 120
           KDRETA +K  GQN+S+D GGD DDEIPEAVAKRIITRILAFVG+PMAFGVTL+KI EA+
Sbjct: 61  KDRETAVKKPSGQNNSRDGGGD-DDEIPEAVAKRIITRILAFVGVPMAFGVTLVKILEAV 120

Query: 121 KVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVERNWVEMWK 180
             Q LW VPIWLPFLTIFLTFGASTMGIAYGTLS SLDPEKEGTLFGW++ ++NWVEMWK
Sbjct: 121 HEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK 180

Query: 181 EEDEANRRGN 191
           EEDEANR GN
Sbjct: 181 EEDEANRGGN 189

[Close]

BLAST of Spg002956 vs. ExPASy TrEMBL
Match: A0A6J1HYL3 (uncharacterized protein PAM68-like OS=Cucurbita maxima OX=3661 GN=LOC111467790 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.0e-78
Identity = 156/190 (82.11%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSKHPPWKLRSRINNSTLTKNLSNFTRTSRRQIQLNAKGFTGSPATG 60
           MK LVCSFR ALDLSK PPWK RSRI+NST TKNL  FT TSR QIQLNAKGFTGSPAT 
Sbjct: 1   MKALVCSFRHALDLSKPPPWKQRSRIDNSTTTKNLRVFTGTSRGQIQLNAKGFTGSPATA 60

Query: 61  KDRETAAEKLPGQNSSKDDGGDYDDEIPEAVAKRIITRILAFVGIPMAFGVTLLKIFEAI 120
           KDRETA +KL  QN+S+ DGGD DDEIPEAVAKRIITRILAFVGIPMAFGVTL+KI EA+
Sbjct: 61  KDRETAVKKLSDQNNSR-DGGD-DDEIPEAVAKRIITRILAFVGIPMAFGVTLVKILEAV 120

Query: 121 KVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVERNWVEMWK 180
             Q LW VPIWLPFLTIFLTFGASTMGIAYGTLS SLDPEKEGTLFGW++ ++NWVEMWK
Sbjct: 121 HEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK 180

Query: 181 EEDEANRRGN 191
           EEDEANR G+
Sbjct: 181 EEDEANRGGD 188

[Close]

BLAST of Spg002956 vs. ExPASy TrEMBL
Match: A0A6J1CGP3 (uncharacterized protein PAM68-like OS=Momordica charantia OX=3673 GN=LOC111011500 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.1e-71
Identity = 137/187 (73.26%), Postives = 162/187 (86.63%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSKHPPWKLRSRINNSTLTKNLSNFTRTSRRQIQLNAKGFTGSPATG 60
           MK L+CS+RQAL LS+ PPWK RSRIN+ST+TKNL+N +R +R  +++NAKGFTG+PAT 
Sbjct: 1   MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNLSRIARGDVRVNAKGFTGTPATA 60

Query: 61  KDRETAAEKLPGQNSSKDDGGDYDDEIPEAVAKRIITRILAFVGIPMAFGVTLLKIFEAI 120
           K+RE AA K+ GQN+S +D    DDEI EAV+ RIITRILAFVG+PMAFGV LLKIFE I
Sbjct: 61  KEREAAARKISGQNNSSNDD---DDEISEAVSNRIITRILAFVGVPMAFGVALLKIFETI 120

Query: 121 KVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVERNWVEMWK 180
           K Q +WDVPIWLPFLT FLTFGAST+GIAYGTLSASLDPEKEG+LFGWE+ ++NWVEMWK
Sbjct: 121 KEQKVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWK 180

Query: 181 EEDEANR 188
           EEDEA+R
Sbjct: 181 EEDEASR 184

[Close]

BLAST of Spg002956 vs. ExPASy TrEMBL
Match: A0A5A7STB5 (Putative Sterol regulatory element-binding protein cleavage-activating protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001970 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.4e-69
Identity = 140/188 (74.47%), Postives = 160/188 (85.11%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSKHPPWKLRS-RINNSTLTKNLSNFTRTSRRQIQLNAKGFTGSPAT 60
           MK+  CSFRQAL L K PP   R+  IN+ST+TKNLSNFT TSR Q+Q+NAKGFTGSPAT
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPAT 60

Query: 61  GKDRETAAEKLPGQNSSKDDGGDYDDEIPEAVAKRIITRILAFVGIPMAFGVTLLKIFEA 120
            K+RETAA+ L GQN+++DD    DDEIPEAV  RIITRILAFVGIPMAFGVTLLKIF+A
Sbjct: 61  AKNRETAAKNLSGQNNNEDD----DDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQA 120

Query: 121 IKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVERNWVEMW 180
           IK QNLWDVPIW+PF T FLTFGASTMGIAYGTLS SLDPEK+G++ GWE+ ++NWVEMW
Sbjct: 121 IKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMW 180

Query: 181 KEEDEANR 188
           KEEDE +R
Sbjct: 181 KEEDEVSR 184

[Close]

BLAST of Spg002956 vs. ExPASy TrEMBL
Match: A0A1S3AZ57 (uncharacterized protein PAM68-like OS=Cucumis melo OX=3656 GN=LOC103484134 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.4e-69
Identity = 140/188 (74.47%), Postives = 160/188 (85.11%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSKHPPWKLRS-RINNSTLTKNLSNFTRTSRRQIQLNAKGFTGSPAT 60
           MK+  CSFRQAL L K PP   R+  IN+ST+TKNLSNFT TSR Q+Q+NAKGFTGSPAT
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPAT 60

Query: 61  GKDRETAAEKLPGQNSSKDDGGDYDDEIPEAVAKRIITRILAFVGIPMAFGVTLLKIFEA 120
            K+RETAA+ L GQN+++DD    DDEIPEAV  RIITRILAFVGIPMAFGVTLLKIF+A
Sbjct: 61  AKNRETAAKNLSGQNNNEDD----DDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQA 120

Query: 121 IKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVERNWVEMW 180
           IK QNLWDVPIW+PF T FLTFGASTMGIAYGTLS SLDPEK+G++ GWE+ ++NWVEMW
Sbjct: 121 IKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMW 180

Query: 181 KEEDEANR 188
           KEEDE +R
Sbjct: 181 KEEDEVSR 184

[Close]

BLAST of Spg002956 vs. TAIR 10
Match: AT5G52780.1 (Protein of unknown function (DUF3464) )

HSP 1 Score: 119.8 bits (299), Expect = 2.4e-27
Identity = 73/183 (39.89%), Postives = 109/183 (59.56%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSKHPPWKLRSRINN-STLTKNLSNFTRTSRRQIQLNAKGFTGSPAT 60
           M+ L+CS R  L LS      ++++ +N  TL  N  N  R   + +    KGF  S  +
Sbjct: 1   MRALLCSHR-LLPLSSLSRTTVKTKSHNPKTLYPN--NKPRWESK-LHAGPKGFQSSRTS 60

Query: 61  GKDRETAAEKLPGQNSSKDDGGDYDDEIPEAVAKRIITRILAFVGIPMAFGVTLLKIFEA 120
            K         PG+    D   + D  IP+ V +R++ RI+  VG P+  GV +LK+ E 
Sbjct: 61  EK---------PGR---PDPDPEDDPPIPQEVFERMMGRIVVSVGTPLGLGVAILKVLEV 120

Query: 121 IKVQNLWDVPIWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVERNWVEMW 180
           +K +N+WDVP+W+P+LT  +TFG+S +GIAYG+LS +LDP K  +LFG ++ + NWVEMW
Sbjct: 121 LKDRNVWDVPLWVPYLTTLVTFGSSALGIAYGSLSTNLDPAKTNSLFGLKEAKENWVEMW 167

Query: 181 KEE 183
           KE+
Sbjct: 181 KED 167

[Close]

BLAST of Spg002956 vs. TAIR 10
Match: AT4G19100.1 (Protein of unknown function (DUF3464) )

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-19
Identity = 56/171 (32.75%), Postives = 89/171 (52.05%), Query Frame = 0


Query: 21  KLRSRINNSTLTKNLSNFTRTSRRQIQLNA-KGFTGSPATGKDRETAAEKLPGQNSSKDD 80
           K +S++  S    N    +R +     +N+ KGF   P   K +++   K   Q+   DD
Sbjct: 37  KTKSQVPKSITCINRLEISRIAPLHATMNSPKGF--GPPPKKTKKSKKPKPGNQSDEDDD 96

Query: 81  GGDYDDE----------IPEAVAKRIITRILAFVGIPMAFGVTLLKIFEAIKVQNLWDVP 140
             D DD+          IPE V  R+I+R+   VG+P+  G+     F  +KV    DVP
Sbjct: 97  DEDEDDDDEEDERERGVIPEIVTNRMISRMGFTVGLPLFIGLLFFPFFYYLKVGLKVDVP 156

Query: 141 IWLPFLTIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEQVERNWVEMWK 181
            W+PF+  F+ FG +  G++YG +S+S DP +EG+L GW + ++NW   W+
Sbjct: 157 TWVPFIVSFVFFGTALAGVSYGIVSSSWDPLREGSLLGWNEAKKNWPVFWQ 205

The following BLAST results are available for this feature:

BLAST of Spg002956 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541387.1	2.5e-79	81.05	uncharacterized protein PAM68-like [Cucurbita pepo subsp. pepo]	[more]
KAG7013265.1	4.3e-79	82.11	putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_022944901.1	5.7e-79	81.58	uncharacterized protein PAM68-like [Cucurbita moschata]	[more]
KAG6574203.1	7.4e-79	81.68	putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022968628.1	6.3e-78	82.11	uncharacterized protein PAM68-like [Cucurbita maxima]	[more]

BLAST of Spg002956 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTD9	3.4e-26	39.89	Uncharacterized protein PAM68-like OS=Arabidopsis thaliana OX=3702 GN=At5g52780 ...	[more]
O49668	4.4e-18	32.75	Protein PAM68, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM68 PE=1 SV=1	[more]

BLAST of Spg002956 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZC0	2.7e-79	81.58	uncharacterized protein PAM68-like OS=Cucurbita moschata OX=3662 GN=LOC111449293...	[more]
A0A6J1HYL3	3.0e-78	82.11	uncharacterized protein PAM68-like OS=Cucurbita maxima OX=3661 GN=LOC111467790 P...	[more]
A0A6J1CGP3	2.1e-71	73.26	uncharacterized protein PAM68-like OS=Momordica charantia OX=3673 GN=LOC11101150...	[more]
A0A5A7STB5	3.4e-69	74.47	Putative Sterol regulatory element-binding protein cleavage-activating protein O...	[more]
A0A1S3AZ57	3.4e-69	74.47	uncharacterized protein PAM68-like OS=Cucumis melo OX=3656 GN=LOC103484134 PE=4 ...	[more]

BLAST of Spg002956 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52780.1	2.4e-27	39.89	Protein of unknown function (DUF3464)	[more]
AT4G19100.1	3.2e-19	32.75	Protein of unknown function (DUF3464)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021855	PAM68-like	PFAM	PF11947	DUF3464	coord: 64..181 e-value: 1.3E-37 score: 128.9
IPR021855	PAM68-like	PANTHER	PTHR34575	PROTEIN PAM68, CHLOROPLASTIC	coord: 1..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..83
None	No IPR available	PANTHER	PTHR34575:SF6	EXPRESSED PROTEIN	coord: 1..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg002956.1	Spg002956.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane