Spg002883 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg002883
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ATP-dependent Clp protease ATP-binding subunit CLPT1
Location	scaffold6: 2098188 .. 2101490 (-)
RNA-Seq Expression	Spg002883
Synteny	Spg002883

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTGAAACAGACCCTAAGCTGCGGCCAAATCGAGAGAGCAAGAAGCTCACGAAACGCCATAGCCAGAGCCAACCAACACCTTCTTCCTTCTCCCTTCTAAGTCATTAACTATTTCAGGGAGACCTGCTACCAGTCTCCTCCAAAATTGAGCTTTCCTTAGCTTCTAATGGCGGCCACTCGCATGAATTCTCTTTCTCTTTCCCAAGTCTCATTTTCCCTTCCAACTCAATCTAATCGTTACACTTTAGAACAGAAAACTCTATTCCTTCCCGTCAGCCCCCTAATCGATCTGAAGCTCGCAATTAAGCGTTCCAGTGCCACCCATCCAGTCTCGAAGTTCAGTCGCCGCGCCACCACTGCCACTGTATCGTTTAGCCTCCCGGCTTCGTAGGATTTGATTGCCACTCTTGCTCGAGTTTCTGATTCTTTTTCTTTTTCAAGCCCTTAGAACTCAAATGTTTTGTCTGATTTTGCAGGAGACCCGAGGGCGTTTCCCCCGAGAAACTTCCCAAGTAAGTTTACCCACAAAATTTCCTCCATTCAATTGGTGTCTTTCTGCTGCATGCGTTGAGCTTAAGTGGTGTTAATTGGAGTGTTTGTTGCTTTCCTTCATAATGTGTGAAGATTATAATCTAATTTAACTGATCTTTTTGAAACTTAATGAGGGTTGATGATTATTTGGGTAGAACTGTAACTTTAGTCCTTATCAATAAGTTTCAAGGCTTCAATTTTAGTCTTTAAGGGCCTGTCTGGGAGGGTTGCAATTAATTTTAAGGACTGTGGTTGAAACCGAAAGGTTAAAATTGTTGTGCATTTGAAACTATTCGCAGATATGTTGAACCATAACTTAACGTGGCAGTCGTGTCACCTCTTACTTGCAGCATATCATAGAATGAATTCTTCTTATCTTTCCATTTTTGGTTGTACGACCTTTTCTCATCCACCTATATTGATTTTCCAGCATGTCATAGCTATTGAATCATTTGTTATATGACTTTACCCTTTTCCGCATTAGACCGTCAATTAATGCAGAAATGATATTGGTGTTAATTGGGATGTTTGTTTGTTGAATTTGTGATGTATAAGATGGTCAGCTAGAGCAATAAAGTCATTTGCAATGGCAGAATTGGAAGCAAGGAAACTCAAATATCCAAATACAGGCACGGAAGCTTTGCTAATGGGAATTTTAATTGAGGGTTAGTAGGCGTTCCAACTCTGAGGTCATTTCTTATTTACATCTAAATTTGGACTTGTGAATTGATTTAGTTTAGTTGAATGCATTTAAGTTGCAGGATTATCTGAATCTTGAACCTTTTTTTTTTGTAATTTTTAAAATACACTAAAATCAAGATCATCTCCCAAGAAGCTAACATTTGATGACCACTTTCAAAATGTGACTACTTTTTCCCACGCCCCTTTCCAGCATCATTCATGATATCTTCCATTGTCATCTGATGTCTCATGTTCAACTACAGAATTATCTTTGAAAGACTTGTTTATGTTAAAAGGATTCGGCTTGAAGCTTATGTTCATGTCAGCTCCTGTCAGCTGATGATCATGATTTATGAGTAACCTATTTTTGACAGTAGCCTTGGGCCACTGGCCACGTGCTTTTTGAATGTCCTTATGTGCAATTGCTAACAATATACATGGTGAAGTGAATTGACAATTTTTAACCTCGTTCAAGAATAAAGGGGATAGGAATAAAAAATACTAAACTGTAGGTGCATATTCACTTTGGTTTCAATCTCGTCTATGCTCGAGTGCTTGATAATGTTCATTTTCCTTAGTGGATATTTCTTCACATTCCTTTCAGGAACAAGTATAGCTGCCAGGTTCTTAAGGGCTAATGGAATTACACTTTTCAAAGTAAGAGAAGAAACTGTCAAGCTACTTGGAAAATCTGACATGTATTTCTTCAGCCCAGAGCATCCTCCATTGACTGAACCGGCTCAGAGGGCACTTGATTGGGCTGTTGCGGAGAAGTTAAAGTCAGGTGAGATCATTCTTCCTAATCATGCAGCAAATGCGATTCTTAATTAGCCTGAAAGTGAATGATGATACTTGAGTTTTCTACTGAAATCTCTCTGCATGCACAAGCTCCCATTGTAAAGAATGAGATGTTAGGACAAGTTTTTTGACTGCTGGTTGAATCAGTTTTTTAGCATTGACTTTTGCCTTGTCCAAACATTAAACAAGGGCCTTATTGTCAGAGGAAAACAGATGAAGGGAGGTTATGCGTGTTTTTGCCACTTACTCTTTGACAGCTTCAGTGGAAAGGAAGTAAATCAGATAATTCTTCCATGGCTAGAATAGTGAATAGACGATTTTGGATTTCCAGATTACGCTTACCTCAATAGAATGTAAAGCATTTATTTTTTCATTTAGCTAGAAACACCCACTTGCAAAAAATTTTGCTGACCTTTTTGGCCATTTTAGCGAAGAAGGATTTCAGTACATCTTATTATCCTGTTATTCACAGCAAATGTGCACAAGTATGTGTGAACTTCTTGATTGTAGATATTTACTAGAATGATTATGATATAGGCGCATTCTATTTTGTACTTCTGCTTGTGGCCGTCTTTGTTGATTGAACCTAAGGTCTTGTATGCAGGTCAACCTGGGGAAATAACTACGGGTCATTTGCTTCTTGGTATCTGGTCAGAGGAATCAGCAGGTCGCAAGATCTTGGTCACCCTTGGCTTTGATGATGAGAAAGCGAAAGAGGTCGAAAAAACCGTAAGTTCTAAATTATTTTCATCTAGTTAGTAGCATCCTCGGGACTTGATGTACTCCACTAATATGTCTCTATTGTTCACAGGTGGACAAGGATGCAACTTTCAGTTATAAGTAGATGGATCATGAAGGAAGATGTGATGTGATTTTCATATTTTCGTGGATGGAATCCTCACAAATGAACCCCCAAATGAGATTCATATGATTTGGATCCCCGTGCATCCATTTGGTGATATAGTGACTTGCCTATTTAATCAGCACCTGCCGTTCAACATAATCAGCTTCATTTTGAATTGACTATTGTTCGAACTTGTGGACTGCTGGTATGGTATGTTACATTCAGTGGTCTCAAATTGCTTGCAGGACATAATTTTCTTACTGTGGCTTTTTTTGGACAAGCAAACTGAGTTGAAAAGGGAGTAACAACCCCTATAATTAACACATAAGATTCATAATTTAGTCTTTGCAAGACATCCTCGATGACATTTCAATTTTAGTTTTTAAAATTTCATCTTTGTTTCTTTTATGCTTCTTAATATATGAGGTTCGGCCTGCCAAAATTCTAG

mRNA sequence

ATGGCGGCCACTCGCATGAATTCTCTTTCTCTTTCCCAAGTCTCATTTTCCCTTCCAACTCAATCTAATCGTTACACTTTAGAACAGAAAACTCTATTCCTTCCCGTCAGCCCCCTAATCGATCTGAAGCTCGCAATTAAGCGTTCCAGTGCCACCCATCCAGTCTCGAAGTTCAGTCGCCGCGCCACCACTGCCACTGTATCGTTTAGCCTCCCGGCTTCGAGACCCGAGGGCGTTTCCCCCGAGAAACTTCCCAAATGGTCAGCTAGAGCAATAAAGTCATTTGCAATGGCAGAATTGGAAGCAAGGAAACTCAAATATCCAAATACAGGCACGGAAGCTTTGCTAATGGGAATTTTAATTGAGGGAACAAGTATAGCTGCCAGGTTCTTAAGGGCTAATGGAATTACACTTTTCAAAGTAAGAGAAGAAACTGTCAAGCTACTTGGAAAATCTGACATGTATTTCTTCAGCCCAGAGCATCCTCCATTGACTGAACCGGCTCAGAGGGCACTTGATTGGGCTGTTGCGGAGAAGTTAAAGTCAGGTCAACCTGGGGAAATAACTACGGGTCATTTGCTTCTTGGTATCTGGTCAGAGGAATCAGCAGGTCGCAAGATCTTGGTCACCCTTGGCTTTGATGATGAGAAAGCGAAAGAGGTCGAAAAAACCGTGGACAAGGATGCAACTTTCAGTTATAAGTAG

Coding sequence (CDS)

ATGGCGGCCACTCGCATGAATTCTCTTTCTCTTTCCCAAGTCTCATTTTCCCTTCCAACTCAATCTAATCGTTACACTTTAGAACAGAAAACTCTATTCCTTCCCGTCAGCCCCCTAATCGATCTGAAGCTCGCAATTAAGCGTTCCAGTGCCACCCATCCAGTCTCGAAGTTCAGTCGCCGCGCCACCACTGCCACTGTATCGTTTAGCCTCCCGGCTTCGAGACCCGAGGGCGTTTCCCCCGAGAAACTTCCCAAATGGTCAGCTAGAGCAATAAAGTCATTTGCAATGGCAGAATTGGAAGCAAGGAAACTCAAATATCCAAATACAGGCACGGAAGCTTTGCTAATGGGAATTTTAATTGAGGGAACAAGTATAGCTGCCAGGTTCTTAAGGGCTAATGGAATTACACTTTTCAAAGTAAGAGAAGAAACTGTCAAGCTACTTGGAAAATCTGACATGTATTTCTTCAGCCCAGAGCATCCTCCATTGACTGAACCGGCTCAGAGGGCACTTGATTGGGCTGTTGCGGAGAAGTTAAAGTCAGGTCAACCTGGGGAAATAACTACGGGTCATTTGCTTCTTGGTATCTGGTCAGAGGAATCAGCAGGTCGCAAGATCTTGGTCACCCTTGGCTTTGATGATGAGAAAGCGAAAGAGGTCGAAAAAACCGTGGACAAGGATGCAACTTTCAGTTATAAGTAG

Protein sequence

MAATRMNSLSLSQVSFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSSATHPVSKFSRRATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTGHLLLGIWSEESAGRKILVTLGFDDEKAKEVEKTVDKDATFSYK

Homology

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BLAST of Spg002883 vs. NCBI nr
Match: XP_022141304.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 415.2 bits (1066), Expect = 3.7e-112
Identity = 214/234 (91.45%), Postives = 224/234 (95.73%), Query Frame = 0


Query: 1   MAATRMNSLSLSQVSFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSSATHPVSKFSR 60
           MAATR+NSLSLSQV FSL TQSN Y LE KTLFLPVSPL +LKLAIKRS+ TH VSKF+R
Sbjct: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTHSVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPA++PEGVSP+KLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL
Sbjct: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGRKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSG+ GEITTGHLLLGIWSEESAGRKIL TLGFDDEKAKE+EK+VDKDATFSYK
Sbjct: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKSVDKDATFSYK 234

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BLAST of Spg002883 vs. NCBI nr
Match: KAG6576777.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014811.1 ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 409.1 bits (1050), Expect = 2.6e-110
Identity = 213/234 (91.03%), Postives = 220/234 (94.02%), Query Frame = 0


Query: 1   MAATRMNSLSLSQVSFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSSATHPVSKFSR 60
           MAATRMNSLSLS V FSLP QSN Y+LE KTLFLP SPLI L LAIKRS+ATH VSKF+R
Sbjct: 1   MAATRMNSLSLSLVPFSLPAQSNCYSLEPKTLFLPASPLIQLNLAIKRSNATHSVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPAS+PEGVSP+KLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPASKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGT+IAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTE AQRALDWAVAEKL
Sbjct: 121 IEGTNIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTESAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGRKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSGQ GEITTGHLLL IWSEESAGRKIL TLGFDDEKAKE+EKTVD DATFSYK
Sbjct: 181 KSGQSGEITTGHLLLAIWSEESAGRKILATLGFDDEKAKEIEKTVDNDATFSYK 234

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BLAST of Spg002883 vs. NCBI nr
Match: XP_023552673.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 407.5 bits (1046), Expect = 7.6e-110
Identity = 212/234 (90.60%), Postives = 219/234 (93.59%), Query Frame = 0


Query: 1   MAATRMNSLSLSQVSFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSSATHPVSKFSR 60
           MAATRMNSLSLS V FSLP QSN Y+LE KTLFLP SPLI L LAIKRS+ATH VSKF+R
Sbjct: 1   MAATRMNSLSLSLVPFSLPAQSNCYSLEPKTLFLPASPLIQLNLAIKRSNATHSVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPAS+PEGVSP+KLPKWSARAIKSFAM ELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPASKPEGVSPDKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGT+IAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTE AQRALDWAVAEKL
Sbjct: 121 IEGTNIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTESAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGRKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSGQ GEITTGHLLL IWSEESAGRKIL TLGFDDEKAKE+EKTVD DATFSYK
Sbjct: 181 KSGQSGEITTGHLLLAIWSEESAGRKILATLGFDDEKAKEIEKTVDNDATFSYK 234

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BLAST of Spg002883 vs. NCBI nr
Match: KAA0033572.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1 [Cucumis melo var. makuwa] >TYK30329.1 ATP-dependent Clp protease ATP-binding subunit CLPT1 [Cucumis melo var. makuwa])

HSP 1 Score: 407.5 bits (1046), Expect = 7.6e-110
Identity = 209/234 (89.32%), Postives = 221/234 (94.44%), Query Frame = 0


Query: 1   MAATRMNSLSLSQVSFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSSATHPVSKFSR 60
           MAATR+NSLS SQ+  SLP+QSN Y+LE K L  P++PLI+LKLAIKRS+ATHPVSKF+R
Sbjct: 1   MAATRLNSLSFSQLPLSLPSQSNCYSLEHKPLLFPLTPLIELKLAIKRSNATHPVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RAT ATVSFSLPAS+PEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATAATVSFSLPASKPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGTS AA+FLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL
Sbjct: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGRKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSGQ GEITTGHLLLGIWSEESAGRKIL TLGFDDEKAKE+ KTVDKDATFSYK
Sbjct: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234

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BLAST of Spg002883 vs. NCBI nr
Match: XP_022922794.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 404.8 bits (1039), Expect = 5.0e-109
Identity = 212/234 (90.60%), Postives = 219/234 (93.59%), Query Frame = 0


Query: 1   MAATRMNSLSLSQVSFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSSATHPVSKFSR 60
           MAATRMNSLSLS V  SLP QSN Y+LE KTLFLPVSPLI L LAIKRS+ATH VSKF+R
Sbjct: 1   MAATRMNSLSLSLVPCSLPAQSNCYSLEPKTLFLPVSPLIQLNLAIKRSNATHSVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPAS+PEGVSP+KLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPASKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGT+IAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTE AQRALDWAVAEKL
Sbjct: 121 IEGTNIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTESAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGRKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSGQ GEITTGHLLL IWSEESAGRKIL TLGFD EKAKE+EKTVD DATFSYK
Sbjct: 181 KSGQSGEITTGHLLLAIWSEESAGRKILATLGFDGEKAKEIEKTVDNDATFSYK 234

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BLAST of Spg002883 vs. ExPASy Swiss-Prot
Match: Q93WL3 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPT1 PE=1 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 8.0e-62
Identity = 127/217 (58.53%), Postives = 163/217 (75.12%), Query Frame = 0


Query: 19  PTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSSATHPVSKFSRRATTATVSFSLPASRPEG 78
           P+ S+R  L         S L+  KL   + S    V K  R  T+A+   ++P ++PE 
Sbjct: 27  PSSSSRIPL--------TSSLLGKKLLATQPSHRCFVPKL-RCLTSASTVLNVPIAQPEN 86

Query: 79  VSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITL 138
            S +K+PKWSARAIKS AM ELEARKLKYP+TGTEA+LMGIL+EGTS  A+FLR NG+TL
Sbjct: 87  GSSDKIPKWSARAIKSLAMGELEARKLKYPSTGTEAILMGILVEGTSTVAKFLRGNGVTL 146

Query: 139 FKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTGHLLLGIW 198
           FKVR+ET+ LLGKSDMYFFSPEHPPLTEPAQ+A+ WA+ EK KS   GE+TT +LLLG+W
Sbjct: 147 FKVRDETLSLLGKSDMYFFSPEHPPLTEPAQKAIAWAIDEKNKSDVDGELTTAYLLLGVW 206

Query: 199 SE-ESAGRKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           S+ +SAGR+IL  LGF+++KAKEVEK++++D   S+K
Sbjct: 207 SQKDSAGRQILEKLGFNEDKAKEVEKSMNEDVDLSFK 234

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BLAST of Spg002883 vs. ExPASy Swiss-Prot
Match: Q8GW78 (ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPT2 PE=1 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 6.6e-56
Identity = 134/225 (59.56%), Postives = 157/225 (69.78%), Query Frame = 0


Query: 4   TRMNSLSLSQVSFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSSATHPVSKFS---- 63
           ++++S S  ++S  L   S R     K L  P   ++D  L     S T PVS       
Sbjct: 17  SQIDSFSKKKLSVPLYFFSTR-----KALTNPWLGVVDSSL-----SLTSPVSALQTNRP 76

Query: 64  RRATTATVSFSLPASRPE-GVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMG 123
           RR   + +S SLP + P+  VS  K PKWS RAIKSFAM ELEARKLKYPNTGTEALLMG
Sbjct: 77  RRIHKSAIS-SLPTANPDLVVSDAKKPKWSWRAIKSFAMGELEARKLKYPNTGTEALLMG 136

Query: 124 ILIEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAE 183
           ILIEGTS  ++FLRAN I L+KVREETVKLLGK+DMYFFSPEHPPLTE AQRALD A+ +
Sbjct: 137 ILIEGTSFTSKFLRANKIMLYKVREETVKLLGKADMYFFSPEHPPLTEDAQRALDSALDQ 196

Query: 184 KLKSGQPGEITTGHLLLGIWSE-ESAGRKILVTLGFDDEKAKEVE 223
            LK+G  GE+   H+LLGIWSE ES G KIL TLGF DEK+KE+E
Sbjct: 197 NLKAGGIGEVMPAHILLGIWSEVESPGHKILATLGFTDEKSKELE 230

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BLAST of Spg002883 vs. ExPASy Swiss-Prot
Match: Q2QVG9 (Chaperone protein ClpC2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CLPC2 PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-12
Identity = 61/185 (32.97%), Postives = 97/185 (52.43%), Query Frame = 0


Query: 31  TLFLPVSPLIDLKLAIKRSSATHPVSKFSRRATTATVSFSLPASRPEGVSPEKLPKWSAR 90
           +L  PV     + L    S +  PV+ F  R+T A+   S    R   V+     +++ +
Sbjct: 39  SLSRPVKMAAFVGLRSVHSFSVTPVTNF--RSTVASYR-SRRGRRARFVTRSMFERFTEK 98

Query: 91  AIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITLFKVREETVKLLG 150
           AIK   +A+ EAR+L +   GTE +L+G++ EGT IAA+ L++ GI L   R E  K++G
Sbjct: 99  AIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIG 158

Query: 151 KSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTGHLLLGIWSE-ESAGRKILV 210
           + +   F     P T  A+R L+ ++ E  + G    I + HLLLG+  E E    ++L 
Sbjct: 159 RGN--GFVAVEIPFTPRAKRVLELSLEEARQLGH-NYIGSEHLLLGLLREGEGVAARVLE 217

Query: 211 TLGFD 215
           +LG D
Sbjct: 219 SLGAD 217

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BLAST of Spg002883 vs. ExPASy Swiss-Prot
Match: P46523 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog, chloroplastic (Fragment) OS=Brassica napus OX=3708 GN=CLPA PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.0e-12
Identity = 49/138 (35.51%), Postives = 76/138 (55.07%), Query Frame = 0


Query: 78  GVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGIT 137
           GV      +++ +AIK   +A+ EAR+L +   GTE +L+G++ EGT IAA+ L++ GI 
Sbjct: 36  GVVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGIN 95

Query: 138 LFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTGHLLLGI 197
           L   R E  K++G+     F     P T  A+R L+ ++ E  + G    I + HLLLG+
Sbjct: 96  LKDARVEVEKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGH-NYIGSEHLLLGL 155

Query: 198 WSE-ESAGRKILVTLGFD 215
             E E    ++L  LG D
Sbjct: 156 LREGEGVAARVLENLGAD 170

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BLAST of Spg002883 vs. ExPASy Swiss-Prot
Match: P31541 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CD4A PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.4e-12
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = 0


Query: 75  RPEG---VSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFL 134
           RP G   V      +++ +AIK   +A+ EAR+L +   GTE +L+G++ EGT IAA+ L
Sbjct: 82  RPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVL 141

Query: 135 RANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTG 194
           ++ GI L   R E  K++G+     F     P T  A+R L+ ++ E  + G    I + 
Sbjct: 142 KSMGINLKDARVEVEKIIGRGS--GFIAVEIPFTPRAKRVLELSLEEARQLGH-NYIGSE 201

Query: 195 HLLLGIWSE-ESAGRKILVTLGFD 215
           HLLLG+  E E    ++L  LG D
Sbjct: 202 HLLLGLLREGEGVAARVLENLGAD 222

[Close]

BLAST of Spg002883 vs. ExPASy TrEMBL
Match: A0A6J1CI79 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111011733 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.8e-112
Identity = 214/234 (91.45%), Postives = 224/234 (95.73%), Query Frame = 0


Query: 1   MAATRMNSLSLSQVSFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSSATHPVSKFSR 60
           MAATR+NSLSLSQV FSL TQSN Y LE KTLFLPVSPL +LKLAIKRS+ TH VSKF+R
Sbjct: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTHSVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPA++PEGVSP+KLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL
Sbjct: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGRKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSG+ GEITTGHLLLGIWSEESAGRKIL TLGFDDEKAKE+EK+VDKDATFSYK
Sbjct: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKSVDKDATFSYK 234

[Close]

BLAST of Spg002883 vs. ExPASy TrEMBL
Match: A0A5D3E3F8 (ATP-dependent Clp protease ATP-binding subunit CLPT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1044G00010 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.7e-110
Identity = 209/234 (89.32%), Postives = 221/234 (94.44%), Query Frame = 0


Query: 1   MAATRMNSLSLSQVSFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSSATHPVSKFSR 60
           MAATR+NSLS SQ+  SLP+QSN Y+LE K L  P++PLI+LKLAIKRS+ATHPVSKF+R
Sbjct: 1   MAATRLNSLSFSQLPLSLPSQSNCYSLEHKPLLFPLTPLIELKLAIKRSNATHPVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RAT ATVSFSLPAS+PEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATAATVSFSLPASKPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGTS AA+FLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL
Sbjct: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGRKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSGQ GEITTGHLLLGIWSEESAGRKIL TLGFDDEKAKE+ KTVDKDATFSYK
Sbjct: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234

[Close]

BLAST of Spg002883 vs. ExPASy TrEMBL
Match: A0A6J1E4F8 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111430678 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.4e-109
Identity = 212/234 (90.60%), Postives = 219/234 (93.59%), Query Frame = 0


Query: 1   MAATRMNSLSLSQVSFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSSATHPVSKFSR 60
           MAATRMNSLSLS V  SLP QSN Y+LE KTLFLPVSPLI L LAIKRS+ATH VSKF+R
Sbjct: 1   MAATRMNSLSLSLVPCSLPAQSNCYSLEPKTLFLPVSPLIQLNLAIKRSNATHSVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPAS+PEGVSP+KLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPASKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGT+IAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTE AQRALDWAVAEKL
Sbjct: 121 IEGTNIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTESAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGRKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSGQ GEITTGHLLL IWSEESAGRKIL TLGFD EKAKE+EKTVD DATFSYK
Sbjct: 181 KSGQSGEITTGHLLLAIWSEESAGRKILATLGFDGEKAKEIEKTVDNDATFSYK 234

[Close]

BLAST of Spg002883 vs. ExPASy TrEMBL
Match: A0A1S3AY13 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103484006 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.1e-109
Identity = 208/234 (88.89%), Postives = 220/234 (94.02%), Query Frame = 0


Query: 1   MAATRMNSLSLSQVSFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSSATHPVSKFSR 60
           MAATR+NSLS SQ+  SLP+QSN Y+LE K L  P++PLI+LKLAIKRS+ATHPVSKF+R
Sbjct: 1   MAATRLNSLSFSQLPLSLPSQSNCYSLEHKPLLFPLTPLIELKLAIKRSNATHPVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RAT ATVSFSLPAS+PEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATAATVSFSLPASKPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGTS AA+FLRANGITLFKVREETVKLLGKSDMYFFS EHPPLTEPAQRALDWAVAEKL
Sbjct: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKSDMYFFSSEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGRKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSGQ GEITTGHLLLGIWSEESAGRKIL TLGFDDEKAKE+ KTVDKDATFSYK
Sbjct: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234

[Close]

BLAST of Spg002883 vs. ExPASy TrEMBL
Match: A0A6J1J1K1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482587 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.6e-108
Identity = 210/234 (89.74%), Postives = 219/234 (93.59%), Query Frame = 0


Query: 1   MAATRMNSLSLSQVSFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSSATHPVSKFSR 60
           MAATRMNSLSLS V  SLP QSN Y+LE KTLFLPVSPLI L LAI+RS+ATH +SK +R
Sbjct: 1   MAATRMNSLSLSLVPCSLPAQSNCYSLEPKTLFLPVSPLIQLNLAIERSNATHSISKSTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTA VSFSLPAS+PEGVSP+KLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTAIVSFSLPASKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGT+IAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTE AQRALDWAVAEKL
Sbjct: 121 IEGTNIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTESAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGRKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSGQ GEITTGHLLL IWSEESAGRKIL TLGFDDEKAKE+EKTVDKDATFSYK
Sbjct: 181 KSGQSGEITTGHLLLAIWSEESAGRKILATLGFDDEKAKEIEKTVDKDATFSYK 234

[Close]

BLAST of Spg002883 vs. TAIR 10
Match: AT4G25370.1 (Double Clp-N motif protein )

HSP 1 Score: 238.4 bits (607), Expect = 5.7e-63
Identity = 127/217 (58.53%), Postives = 163/217 (75.12%), Query Frame = 0


Query: 19  PTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSSATHPVSKFSRRATTATVSFSLPASRPEG 78
           P+ S+R  L         S L+  KL   + S    V K  R  T+A+   ++P ++PE 
Sbjct: 27  PSSSSRIPL--------TSSLLGKKLLATQPSHRCFVPKL-RCLTSASTVLNVPIAQPEN 86

Query: 79  VSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITL 138
            S +K+PKWSARAIKS AM ELEARKLKYP+TGTEA+LMGIL+EGTS  A+FLR NG+TL
Sbjct: 87  GSSDKIPKWSARAIKSLAMGELEARKLKYPSTGTEAILMGILVEGTSTVAKFLRGNGVTL 146

Query: 139 FKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTGHLLLGIW 198
           FKVR+ET+ LLGKSDMYFFSPEHPPLTEPAQ+A+ WA+ EK KS   GE+TT +LLLG+W
Sbjct: 147 FKVRDETLSLLGKSDMYFFSPEHPPLTEPAQKAIAWAIDEKNKSDVDGELTTAYLLLGVW 206

Query: 199 SE-ESAGRKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           S+ +SAGR+IL  LGF+++KAKEVEK++++D   S+K
Sbjct: 207 SQKDSAGRQILEKLGFNEDKAKEVEKSMNEDVDLSFK 234

[Close]

BLAST of Spg002883 vs. TAIR 10
Match: AT4G12060.1 (Double Clp-N motif protein )

HSP 1 Score: 218.8 bits (556), Expect = 4.7e-57
Identity = 134/225 (59.56%), Postives = 157/225 (69.78%), Query Frame = 0


Query: 4   TRMNSLSLSQVSFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSSATHPVSKFS---- 63
           ++++S S  ++S  L   S R     K L  P   ++D  L     S T PVS       
Sbjct: 17  SQIDSFSKKKLSVPLYFFSTR-----KALTNPWLGVVDSSL-----SLTSPVSALQTNRP 76

Query: 64  RRATTATVSFSLPASRPE-GVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMG 123
           RR   + +S SLP + P+  VS  K PKWS RAIKSFAM ELEARKLKYPNTGTEALLMG
Sbjct: 77  RRIHKSAIS-SLPTANPDLVVSDAKKPKWSWRAIKSFAMGELEARKLKYPNTGTEALLMG 136

Query: 124 ILIEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAE 183
           ILIEGTS  ++FLRAN I L+KVREETVKLLGK+DMYFFSPEHPPLTE AQRALD A+ +
Sbjct: 137 ILIEGTSFTSKFLRANKIMLYKVREETVKLLGKADMYFFSPEHPPLTEDAQRALDSALDQ 196

Query: 184 KLKSGQPGEITTGHLLLGIWSE-ESAGRKILVTLGFDDEKAKEVE 223
            LK+G  GE+   H+LLGIWSE ES G KIL TLGF DEK+KE+E
Sbjct: 197 NLKAGGIGEVMPAHILLGIWSEVESPGHKILATLGFTDEKSKELE 230

[Close]

BLAST of Spg002883 vs. TAIR 10
Match: AT5G50920.1 (CLPC homologue 1 )

HSP 1 Score: 72.8 bits (177), Expect = 4.2e-13
Identity = 47/130 (36.15%), Postives = 74/130 (56.92%), Query Frame = 0


Query: 86  KWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITLFKVREET 145
           +++ +AIK   +A+ EAR+L +   GTE +L+G++ EGT IAA+ L++ GI L   R E 
Sbjct: 97  RFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEV 156

Query: 146 VKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTGHLLLGIWSE-ESAG 205
            K++G+     F     P T  A+R L+ ++ E  + G    I + HLLLG+  E E   
Sbjct: 157 EKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGH-NYIGSEHLLLGLLREGEGVA 216

Query: 206 RKILVTLGFD 215
            ++L  LG D
Sbjct: 217 ARVLENLGAD 223

[Close]

BLAST of Spg002883 vs. TAIR 10
Match: AT3G48870.1 (Clp ATPase )

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-12
Identity = 46/130 (35.38%), Postives = 74/130 (56.92%), Query Frame = 0


Query: 86  KWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITLFKVREET 145
           +++ +AIK   +++ EAR+L +   GTE +L+G++ EGT IAA+ L++ GI L   R E 
Sbjct: 117 RFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEV 176

Query: 146 VKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTGHLLLGIWSE-ESAG 205
            K++G+     F     P T  A+R L+ ++ E  + G    I + HLLLG+  E E   
Sbjct: 177 EKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGH-NYIGSEHLLLGLLREGEGVA 236

Query: 206 RKILVTLGFD 215
            ++L  LG D
Sbjct: 237 ARVLENLGAD 243

[Close]

BLAST of Spg002883 vs. TAIR 10
Match: AT3G48870.2 (Clp ATPase )

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-12
Identity = 46/130 (35.38%), Postives = 74/130 (56.92%), Query Frame = 0


Query: 86  KWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITLFKVREET 145
           +++ +AIK   +++ EAR+L +   GTE +L+G++ EGT IAA+ L++ GI L   R E 
Sbjct: 86  RFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEV 145

Query: 146 VKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTGHLLLGIWSE-ESAG 205
            K++G+     F     P T  A+R L+ ++ E  + G    I + HLLLG+  E E   
Sbjct: 146 EKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGH-NYIGSEHLLLGLLREGEGVA 205

Query: 206 RKILVTLGFD 215
            ++L  LG D
Sbjct: 206 ARVLENLGAD 212

The following BLAST results are available for this feature:

BLAST of Spg002883 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141304.1	3.7e-112	91.45	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Momord...	[more]
KAG6576777.1	2.6e-110	91.03	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic, partial [Cu...	[more]
XP_023552673.1	7.6e-110	90.60	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucurb...	[more]
KAA0033572.1	7.6e-110	89.32	ATP-dependent Clp protease ATP-binding subunit CLPT1 [Cucumis melo var. makuwa] ...	[more]
XP_022922794.1	5.0e-109	90.60	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucurb...	[more]

BLAST of Spg002883 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WL3	8.0e-62	58.53	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic OS=Arabidops...	[more]
Q8GW78	6.6e-56	59.56	ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic OS=Arabidops...	[more]
Q2QVG9	1.2e-12	32.97	Chaperone protein ClpC2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
P46523	2.0e-12	35.51	ATP-dependent Clp protease ATP-binding subunit ClpA homolog, chloroplastic (Frag...	[more]
P31541	3.4e-12	35.42	ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic ...	[more]

BLAST of Spg002883 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CI79	1.8e-112	91.45	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Momo...	[more]
A0A5D3E3F8	3.7e-110	89.32	ATP-dependent Clp protease ATP-binding subunit CLPT1 OS=Cucumis melo var. makuwa...	[more]
A0A6J1E4F8	2.4e-109	90.60	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucu...	[more]
A0A1S3AY13	3.1e-109	88.89	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucu...	[more]
A0A6J1J1K1	1.6e-108	89.74	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucu...	[more]

BLAST of Spg002883 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25370.1	5.7e-63	58.53	Double Clp-N motif protein	[more]
AT4G12060.1	4.7e-57	59.56	Double Clp-N motif protein	[more]
AT5G50920.1	4.2e-13	36.15	CLPC homologue 1	[more]
AT3G48870.1	1.6e-12	35.38	Clp ATPase	[more]
AT3G48870.2	1.6e-12	35.38	Clp ATPase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004176	Clp, repeat (R) domain	PFAM	PF02861	Clp_N	coord: 98..150 e-value: 4.4E-10 score: 39.5 coord: 187..223 e-value: 2.6E-5 score: 24.3
IPR004176	Clp, repeat (R) domain	PROSITE	PS51903	CLP_R	coord: 84..228 score: 30.62114
IPR036628	Clp, N-terminal domain superfamily	GENE3D	1.10.1780.10		coord: 86..232 e-value: 1.3E-42 score: 147.2
IPR036628	Clp, N-terminal domain superfamily	SUPERFAMILY	81923	Double Clp-N motif	coord: 86..218
IPR044217	ATP-dependent Clp protease ATP-binding subunit CLPT1/2	PANTHER	PTHR47016	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC	coord: 1..234
None	No IPR available	PANTHER	PTHR47016:SF1	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC	coord: 1..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg002883.1	Spg002883.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009532	plastid stroma
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008233	peptidase activity