Spg002858 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg002858
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Remorin-like
Location	scaffold6: 1553133 .. 1553551 (+)
RNA-Seq Expression	Spg002858
Synteny	Spg002858

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGTCTTTGAAATAAAATTGTGCAGAGCTGAAAGGAAGTTAGCTTCCACTGAGGCATGGAAGAGCACAAAGAAATCTGCTCTAGAAGCTGAAGTCAAGAAGATAGAGGTAAATTAAATTCCATTATTATTCATAATTTTTATCCTAATTAAGTTTTGAAACCCTAATGAAAATGGAGTATTAATTTCATATATATATTTATATATTATATGGGGAAGGGTGATTTGGAGAAGATGAGGCTAAAGGAAATGGAGAAAGTAAAAAACAAAGAGGCTGAGACTCACAAGGCAGTTGAATCAAAGAAGGCATCCATTGAAGCAAACAGAGAGCACAAAAAGCAAAAGGTTGAAGAGAAAGCTGCCAAGCATAGGTCTGCCAATACAGTTCCAACCAAGTGTTTTGGCATTTGCCAAGACTAG

mRNA sequence

GAAGTCTTTGAAATAAAATTGTGCAGAGCTGAAAGGAAGTTAGCTTCCACTGAGGCATGGAAGAGCACAAAGAAATCTGCTCTAGAAGCTGAAGTCAAGAAGATAGAGGGTGATTTGGAGAAGATGAGGCTAAAGGAAATGGAGAAAGTAAAAAACAAAGAGGCTGAGACTCACAAGGCAGTTGAATCAAAGAAGGCATCCATTGAAGCAAACAGAGAGCACAAAAAGCAAAAGGTTGAAGAGAAAGCTGCCAAGCATAGGTCTGCCAATACAGTTCCAACCAAGTGTTTTGGCATTTGCCAAGACTAG

Coding sequence (CDS)

GAAGTCTTTGAAATAAAATTGTGCAGAGCTGAAAGGAAGTTAGCTTCCACTGAGGCATGGAAGAGCACAAAGAAATCTGCTCTAGAAGCTGAAGTCAAGAAGATAGAGGGTGATTTGGAGAAGATGAGGCTAAAGGAAATGGAGAAAGTAAAAAACAAAGAGGCTGAGACTCACAAGGCAGTTGAATCAAAGAAGGCATCCATTGAAGCAAACAGAGAGCACAAAAAGCAAAAGGTTGAAGAGAAAGCTGCCAAGCATAGGTCTGCCAATACAGTTCCAACCAAGTGTTTTGGCATTTGCCAAGACTAG

Protein sequence

EVFEIKLCRAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTKCFGICQD

Homology

[Close]

BLAST of Spg002858 vs. NCBI nr
Match: KGN57373.1 (hypothetical protein Csa_010046 [Cucumis sativus])

HSP 1 Score: 129.0 bits (323), Expect = 2.3e-26
Identity = 73/94 (77.66%), Postives = 81/94 (86.17%), Query Frame = 0


Query: 9   RAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASI 68
           +AER+LASTEAWK++KK+ALEAEVKKI+ DL K+RL+ MEKVKNKEAETHKAVESKKASI
Sbjct: 33  KAERRLASTEAWKNSKKAALEAEVKKIDADLVKLRLRGMEKVKNKEAETHKAVESKKASI 92

Query: 69  EANREHKKQKVEEKAAKHRSANTVPTKCFGICQD 103
           EA RE KK KVE KA  HR  NTVP KCFGIC D
Sbjct: 93  EAKRELKKLKVEGKAKVHRCTNTVPKKCFGICND 126

[Close]

BLAST of Spg002858 vs. NCBI nr
Match: XP_004140777.2 (remorin [Cucumis sativus])

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-17
Identity = 60/75 (80.00%), Postives = 68/75 (90.67%), Query Frame = 0


Query: 9   RAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASI 68
           +AER+LASTEAWK++KK+ALEAEVKKI+ DL K+RL+ MEKVKNKEAETHKAVESKKASI
Sbjct: 33  KAERRLASTEAWKNSKKAALEAEVKKIDADLVKLRLRGMEKVKNKEAETHKAVESKKASI 92

Query: 69  EANREHKKQKVEEKA 84
           EA RE KK KVE KA
Sbjct: 93  EAKRELKKLKVEGKA 107

[Close]

BLAST of Spg002858 vs. NCBI nr
Match: KAA0033641.1 (remorin-like [Cucumis melo var. makuwa] >TYK22940.1 remorin-like [Cucumis melo var. makuwa])

HSP 1 Score: 93.2 bits (230), Expect = 1.4e-15
Identity = 51/67 (76.12%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 36  EGDLEKMRLKEMEKVKNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTK 95
           + DL K+RLKEMEKVKNKEAETHKAVESKKASIEA RE +K KVE++A  HR  NTVP K
Sbjct: 6   KADLAKLRLKEMEKVKNKEAETHKAVESKKASIEAKRELRKLKVEDRAKMHRCTNTVPKK 65

Query: 96  CFGICQD 103
           CFGIC D
Sbjct: 66  CFGICND 72

[Close]

BLAST of Spg002858 vs. NCBI nr
Match: KAF5732350.1 (Remorin family protein [Tripterygium wilfordii])

HSP 1 Score: 84.0 bits (206), Expect = 8.4e-13
Identity = 46/92 (50.00%), Postives = 70/92 (76.09%), Query Frame = 0


Query: 9   RAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASI 68
           RA+R+LA TEAW+  KK++LEA+ K+IE + E ++ K++E++KNKEA   K ++ +KA+I
Sbjct: 8   RAQRRLADTEAWEKKKKASLEAKHKQIEIEAENLKHKKLEQLKNKEAGAQKTIQEEKAAI 67

Query: 69  EANREHKKQKVEEKAAKHRSANTVPTKCFGIC 101
           EA RE    KVE+KA+K+R++N+ P K FG C
Sbjct: 68  EAQREKSTMKVEDKASKYRASNSFPKKFFGFC 99

[Close]

BLAST of Spg002858 vs. NCBI nr
Match: XP_024438026.1 (uncharacterized protein LOC7484383 isoform X1 [Populus trichocarpa])

HSP 1 Score: 80.1 bits (196), Expect = 1.2e-11
Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 0


Query: 9   RAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASI 68
           +A+R L+  + W+   K + EA+  KIE +LE +R  + EK+KN+EA+  KA+E KKA+I
Sbjct: 183 KAQRMLSDIKTWEEKMKISHEAKTMKIEAELESIRQHKHEKIKNEEAQIQKAMEQKKAAI 242

Query: 69  EANREHKKQKVEEKAAKHRSANTVPTKCFGICQD 103
           +A  + K  ++ EKA KHRS NT+P KCFGIC D
Sbjct: 243 DAQNQKKVLEITEKADKHRSNNTLPMKCFGICAD 276

[Close]

BLAST of Spg002858 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-12
Identity = 44/90 (48.89%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 9   RAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASI 68
           +AE+KL+S  +W++ KK+A+EAE+KK+E  LEK + + +E++KNK A+ HK  E K+A I
Sbjct: 111 KAEKKLSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMI 170

Query: 69  EANREHKKQKVEEKAAKHRSANTVPTKCFG 99
           EA R  +  K EE AAK+R+  T P K FG
Sbjct: 171 EAKRGEEILKAEELAAKYRATGTAPKKLFG 200

[Close]

BLAST of Spg002858 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.8e-11
Identity = 43/91 (47.25%), Postives = 61/91 (67.03%), Query Frame = 0


Query: 9   RAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASI 68
           +A++K+++  AW+++KK+ LEAE+KK+E  LEK + +  EK+KNK A  HK  E K+A I
Sbjct: 107 KAQKKVSAIGAWENSKKANLEAELKKMEEQLEKKKAEYTEKMKNKIALLHKEAEEKRAMI 166

Query: 69  EANREHKKQKVEEKAAKHRSANTVPTKCFGI 100
           EA R     K EE AAK+R+  T P K  GI
Sbjct: 167 EAKRGEDLLKAEELAAKYRATGTAPKKILGI 197

[Close]

BLAST of Spg002858 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-10
Identity = 41/90 (45.56%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 9   RAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASI 68
           +AE+K+A   AW+++KK+A+EA++KKIE  LEK + +  E++KNK A  HK  E ++A I
Sbjct: 121 KAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMI 180

Query: 69  EANREHKKQKVEEKAAKHRSANTVPTKCFG 99
           EA R     K EE AAK+R+   VP    G
Sbjct: 181 EAKRGEDVLKAEETAAKYRATGIVPKATCG 210

[Close]

BLAST of Spg002858 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-09
Identity = 38/90 (42.22%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 9   RAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASI 68
           RA++K++   AW+++KK+A+EA+++KIE  LEK + +  EK+KNK A  HK  E K+A +
Sbjct: 99  RAQKKISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMV 158

Query: 69  EANREHKKQKVEEKAAKHRSANTVPTKCFG 99
           EA +  +  K EE  AK+R+   VP    G
Sbjct: 159 EAKKGEELLKAEEMGAKYRATGVVPKATCG 188

[Close]

BLAST of Spg002858 vs. ExPASy TrEMBL
Match: A0A0A0L6I9 (Remorin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182090 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.1e-26
Identity = 73/94 (77.66%), Postives = 81/94 (86.17%), Query Frame = 0


Query: 9   RAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASI 68
           +AER+LASTEAWK++KK+ALEAEVKKI+ DL K+RL+ MEKVKNKEAETHKAVESKKASI
Sbjct: 33  KAERRLASTEAWKNSKKAALEAEVKKIDADLVKLRLRGMEKVKNKEAETHKAVESKKASI 92

Query: 69  EANREHKKQKVEEKAAKHRSANTVPTKCFGICQD 103
           EA RE KK KVE KA  HR  NTVP KCFGIC D
Sbjct: 93  EAKRELKKLKVEGKAKVHRCTNTVPKKCFGICND 126

[Close]

BLAST of Spg002858 vs. ExPASy TrEMBL
Match: A0A5D3DHT0 (Remorin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00180 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 6.7e-16
Identity = 51/67 (76.12%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 36  EGDLEKMRLKEMEKVKNKEAETHKAVESKKASIEANREHKKQKVEEKAAKHRSANTVPTK 95
           + DL K+RLKEMEKVKNKEAETHKAVESKKASIEA RE +K KVE++A  HR  NTVP K
Sbjct: 6   KADLAKLRLKEMEKVKNKEAETHKAVESKKASIEAKRELRKLKVEDRAKMHRCTNTVPKK 65

Query: 96  CFGICQD 103
           CFGIC D
Sbjct: 66  CFGICND 72

[Close]

BLAST of Spg002858 vs. ExPASy TrEMBL
Match: A0A7J7CE28 (Remorin family protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW18G01044 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 4.1e-13
Identity = 46/92 (50.00%), Postives = 70/92 (76.09%), Query Frame = 0


Query: 9   RAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASI 68
           RA+R+LA TEAW+  KK++LEA+ K+IE + E ++ K++E++KNKEA   K ++ +KA+I
Sbjct: 8   RAQRRLADTEAWEKKKKASLEAKHKQIEIEAENLKHKKLEQLKNKEAGAQKTIQEEKAAI 67

Query: 69  EANREHKKQKVEEKAAKHRSANTVPTKCFGIC 101
           EA RE    KVE+KA+K+R++N+ P K FG C
Sbjct: 68  EAQREKSTMKVEDKASKYRASNSFPKKFFGFC 99

[Close]

BLAST of Spg002858 vs. ExPASy TrEMBL
Match: A0A2K1YDD2 (Remorin_C domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G140900 PE=3 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 5.9e-12
Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 0


Query: 9   RAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASI 68
           +A+R L+  + W+   K + EA+  KIE +LE +R  + EK+KN+EA+  KA+E KKA+I
Sbjct: 31  KAQRMLSDIKTWEEKMKISHEAKTMKIEAELESIRQHKHEKIKNEEAQIQKAMEQKKAAI 90

Query: 69  EANREHKKQKVEEKAAKHRSANTVPTKCFGICQD 103
           +A  + K  ++ EKA KHRS NT+P KCFGIC D
Sbjct: 91  DAQNQKKVLEITEKADKHRSNNTLPMKCFGICAD 124

[Close]

BLAST of Spg002858 vs. ExPASy TrEMBL
Match: A0A5E4E5K9 (PREDICTED: remorin OS=Prunus dulcis OX=3755 GN=ALMOND_2B011497 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.0e-11
Identity = 48/94 (51.06%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 9   RAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASI 68
           +A++  A  E  K+  +  LEA  KKIE  +EK+R KE+EK+KNKEA + K +E  K  I
Sbjct: 36  KADKMKAINEEKKNASEIDLEALGKKIETKVEKLRHKELEKMKNKEAHSIKVIEDTKVKI 95

Query: 69  EANREHKKQKVEEKAAKHRSANTVPTKCFGICQD 103
           EA R H  QKVE+KA K R +N++PTKCFG+C D
Sbjct: 96  EAKRTHGLQKVEKKAEKFRGSNSLPTKCFGVCAD 129

[Close]

BLAST of Spg002858 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 73.9 bits (180), Expect = 8.1e-14
Identity = 44/90 (48.89%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 9   RAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASI 68
           +AE+KL+S  +W++ KK+A+EAE+KK+E  LEK + + +E++KNK A+ HK  E K+A I
Sbjct: 111 KAEKKLSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMI 170

Query: 69  EANREHKKQKVEEKAAKHRSANTVPTKCFG 99
           EA R  +  K EE AAK+R+  T P K FG
Sbjct: 171 EAKRGEEILKAEELAAKYRATGTAPKKLFG 200

[Close]

BLAST of Spg002858 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 73.9 bits (180), Expect = 8.1e-14
Identity = 44/90 (48.89%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 9   RAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASI 68
           +AE+KL+S  +W++ KK+A+EAE+KK+E  LEK + + +E++KNK A+ HK  E K+A I
Sbjct: 110 KAEKKLSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMI 169

Query: 69  EANREHKKQKVEEKAAKHRSANTVPTKCFG 99
           EA R  +  K EE AAK+R+  T P K FG
Sbjct: 170 EAKRGEEILKAEELAAKYRATGTAPKKLFG 199

[Close]

BLAST of Spg002858 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 70.9 bits (172), Expect = 6.9e-13
Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 0


Query: 9   RAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASI 68
           +A++K++S  AW+++KK+++EAE+KKIE  L K +    E++KNK A+ HK  E K+A  
Sbjct: 84  KAQKKISSVGAWENSKKASVEAELKKIEEQLNKKKAHYTEQMKNKIAQIHKEAEEKRAMT 143

Query: 69  EANREHKKQKVEEKAAKHRSANTVPTKCFG 99
           EA R     K EE AAK+R+  T PTK FG
Sbjct: 144 EAKRGEDVLKAEEMAAKYRATGTAPTKLFG 173

[Close]

BLAST of Spg002858 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 67.0 bits (162), Expect = 9.9e-12
Identity = 41/90 (45.56%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 9   RAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASI 68
           +AE+K+A   AW+++KK+A+EA++KKIE  LEK + +  E++KNK A  HK  E ++A I
Sbjct: 121 KAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMI 180

Query: 69  EANREHKKQKVEEKAAKHRSANTVPTKCFG 99
           EA R     K EE AAK+R+   VP    G
Sbjct: 181 EAKRGEDVLKAEETAAKYRATGIVPKATCG 210

[Close]

BLAST of Spg002858 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 63.9 bits (154), Expect = 8.4e-11
Identity = 38/90 (42.22%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 9   RAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASI 68
           RA++K++   AW+++KK+A+EA+++KIE  LEK + +  EK+KNK A  HK  E K+A +
Sbjct: 99  RAQKKISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMV 158

Query: 69  EANREHKKQKVEEKAAKHRSANTVPTKCFG 99
           EA +  +  K EE  AK+R+   VP    G
Sbjct: 159 EAKKGEELLKAEEMGAKYRATGVVPKATCG 188

The following BLAST results are available for this feature:

BLAST of Spg002858 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57373.1	2.3e-26	77.66	hypothetical protein Csa_010046 [Cucumis sativus]	[more]
XP_004140777.2	1.1e-17	80.00	remorin [Cucumis sativus]	[more]
KAA0033641.1	1.4e-15	76.12	remorin-like [Cucumis melo var. makuwa] >TYK22940.1 remorin-like [Cucumis melo v...	[more]
KAF5732350.1	8.4e-13	50.00	Remorin family protein [Tripterygium wilfordii]	[more]
XP_024438026.1	1.2e-11	47.87	uncharacterized protein LOC7484383 isoform X1 [Populus trichocarpa]	[more]

BLAST of Spg002858 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFA5	1.1e-12	48.89	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
P93788	4.8e-11	47.25	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
Q9M2D8	1.4e-10	45.56	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
O80837	1.2e-09	42.22	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]

BLAST of Spg002858 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6I9	1.1e-26	77.66	Remorin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182090 P...	[more]
A0A5D3DHT0	6.7e-16	76.12	Remorin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00180 P...	[more]
A0A7J7CE28	4.1e-13	50.00	Remorin family protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW18G01044 P...	[more]
A0A2K1YDD2	5.9e-12	47.87	Remorin_C domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G...	[more]
A0A5E4E5K9	1.0e-11	51.06	PREDICTED: remorin OS=Prunus dulcis OX=3755 GN=ALMOND_2B011497 PE=3 SV=1	[more]

BLAST of Spg002858 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23750.1	8.1e-14	48.89	Remorin family protein	[more]
AT5G23750.2	8.1e-14	48.89	Remorin family protein	[more]
AT3G48940.1	6.9e-13	46.67	Remorin family protein	[more]
AT3G61260.1	9.9e-12	45.56	Remorin family protein	[more]
AT2G45820.1	8.4e-11	42.22	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 25..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..90
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 9..98
None	No IPR available	PANTHER	PTHR31775:SF31	CARBOXY-TERMINAL REGION REMORIN	coord: 9..98
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 9..95 e-value: 8.8E-16 score: 57.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg002858.1	Spg002858.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress