Spg002715 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg002715
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Vesicle transport protein
Location	scaffold6: 719658 .. 722917 (+)
RNA-Seq Expression	Spg002715
Synteny	Spg002715

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCTCTGGCGCGCAGTGGGTTTAGTTTCTCGATGATCGATCGCCATTATTCCACAAGTCGAATTTCTTACAGCTCGAGAACCACGTGAGCTCAGCCAGTTCTGAATTTTCCTTCAAAATGTGGAAGCTCAGCCGAGGCGTATTTGGCGATGACGAAGAGCGTGGCCAGAGCTTGTTGGATGAAGATTCAGAAGATCTATGCTCTCTAACTCCCGTACAGGTACTTCAAACAACGATCAGAGAGCTTGGGTTTTTGTCTTTTTGTTAATTTTTTCCGTTTTCATACTGTTTTGGGTTTTTGCTGAACAGAGACTGTACGGGTTTGGAGGATGCTTGACGGGGGGCGTCGTTTGCATGATTGTGGTATGAACTCTTAAGCGACTTCTACATTTGTACAATTTCATGTGTTTATATTATATGCATCTTGTTTAAATGAGGAAATTTGATTGGTAACTCGGGGGGTTTTTTTTTCCCTTCTATTTCCATTGATTATTTTGGGATGTAAATAAGGTTTATATTCTGTGACTATCCACTCGTTGGTACTTGAGGCTGCAAGTGTAGATTAATAAACATAGCAAACAAGGAAGGTGGTATTGGATTTGGATTGAAAGCTAAGGAATTTCCTCTAAGAGGGGAATACTAAAGAAAAATTAAGTCGCTTGGTCGATTGGGATATTGTTTCCACTAATTGAAAATGGAGGACTCTCGATTGGGAATTGAAGGAAGAAAAATGGACATTAATTATCAAATGGATATGGCGGCTTTTTACTGATTCTGATGAATTGTGGAATGAGATTCTATCCACTATTCATGGGAAGAAACAGAGGGTATTTTTGTTTTACGAGGGTTGGATGATTCTGCTATCAAAGTCCATGGTCCAATATTACAAAACTGAGATGATTTATAGAGGCATTCACTAGCAATAGCATTGAGGTGGCCAATTGAAAGAAAACCTTTTTCTGGAGAGACTACTGGGAAGCCATCTCTGTTGGTAAGATTTTCAAGGTTGTTTGTAGCTTCAGGAGATAGGAAAATGAGACCATGGCTGAAGCTTGGGGGGATGTTCTTGGAACATGACAACCTGGAAGAACTTTACCAGAAATGGGCATTGGGCAAGGGGTTGTTTACAACAATCTGGAAGGAAACAAATGAGCGCTAAAGAAGTCAACTTCTTTGTGTGGCCATTATGTCATTGAGAGTATAAACTCAGCTGAGGTGAGGGGTTCAAAGCCCAAAGGAGATAATATGGTTTTAAAACCCAGTTAGTGTATACTTTGTTACCGTAAGCTGTGCTGGGAATCTCAACTTAATAAAATGCAGTGCACTCAGACCCTTTACGAGTCAGTAAAATATGATGTTATTCCATTGTTATTGACTCACAGACTTGAGAAGAAAGCTAAAACCATATGGGGTTTACAGTTGGATAGGAATACAAGATTCACAAACTAAATTTTCTTCATTATTGCATTATAATATTAAGTAAACAATGGGATTACTCAAGAGGTAAAGCTAATTATCAATAACATAATATATTGCACAGGCTATGTCTTGTACTATTGTCTTAATCTTTTCACCGTACAATATCAACAGATGATTTTGTTCATTTTTTCTTTTACTTCATCGGTGTTTTCTTTTTTTATAATCTCGTTTTTTTTCTCTGAAGTTCCATTTGGATTTTTGTGATTCTAGATCAACATAGCCCAACTCTATTGATTTCATTTTTGCTCGTTATCTGAAACTACATTTATTAAGGGAGAAACTTGATGTGTTTTCTACATTTTCTTTTTGCAGTCGTTGCTTGTTTTTGCTAAGCCACTCAAATTTGCTGTACTATTTACATTTGGCAATGTTTTGGCAGTCGGAAGGTACAACGAATTAAACTAGAAAGTTGTTGTTGTTATGTTCTATATGTCAGCAGTTAAGAAGTATGATTTGGAGGAGCACTTTTGTTCAGGAGTTAAACTAGAAAGCTGTCGTAATCTTCTATCTCATAAATTTCCTTCAAGAAGTTTATTTATGTACAAACAAAAGGAAGATAATAATTTATCAAAAGAAAAGGAAAAAAAGGGAGATAATCAAGGAGGAAAACTTTTAATGTATTCTACCTGTGTTGTTCCTTTTCCTTGAGATATTAATATTCTAAACTGCCTCTTATTTGGCAGCACAGCTTTCCTCTTTGGACCTGGGCAACAAATAAGAATGATGTTTGATTCTGTTCGTATTTATGCAACAGCTATTTACCTTGGATGTGTTGTTCTAGCTCTTATATGTGCTCTCTGGGTAAGTTACGATTCTGACTAATATAACATTATAGGGGAAAAGCAGACTTAAAGTACTAGTGCACAAAGATATTCACTAAACAATCTTCTATATAAATCTGTTGGAACACAACACTATTGGCGTTTCCTATTTGGTTCCTCTTCATCTATTCCACAAGATTTCCCAATACAGTTTTAGCATTGTTTTTCTTTAACACTTAATAAAACATGCATCGGAATCCTTTTGTCCTTTTGTCGTTGCTTATAAAAAAAATAATAATAATAAAAAATGCATCAGAATGTGATATCAGCCTAAGATGGAATTCTGCAGACTGTTAACCTCTCATATTTAGTTGTTTAAATGTTTTTCTTTGCTATTCATTTTCCATTTTTCAGATCCACAATAAGATCTTGACAGTGATTGCAATAATCAGTGAGATATGTGCACTTATATGGTATGTTTACCTTTATCATTGTCATTCCTCCACTTGATTCAAGTTTCATTTAGAACTAGAGGTTGAAAATTTTATCCGACATTTTTACATGATTAAAATGTGTTCAACCATATCTCGTGAGACTCTTCTTGCATCTAAACTAGATTGGGCCATGACTTTCTTGGTTTGTCCTGTTCCAGGTATAGTTTGAGCTATATTCCTTTTGCCCGGAGGATGGTCTCTGAATTGATGATCCGATTTTGTGACACAGAACTATAGACAATGAAACTTGCGATGATGATTGATGATTCAGTCTCTTCAAGATCTGGGATTGTCCTTGTCTTTGTTGTTTTTATTTTTTAGCGAGCACAAGACCAGTTGGAGATTTGTTTTTTTTTATTATTATTATTTTATATTTATTTTCTGGTCGAAGTTGATTTTGTCCAAATACATGTATAATCCAATGCCAATTCAATGCTTGTGCTAATTTTCAAAATATAACAGCATTCTTTTCGCAAAATAAACTTAGTGATCTCTCTCTCTCTCTTTATATCTCAATGGGAAGTG

mRNA sequence

ATGTGGAAGCTCAGCCGAGGCGTATTTGGCGATGACGAAGAGCGTGGCCAGAGCTTGTTGGATGAAGATTCAGAAGATCTATGCTCTCTAACTCCCGTACAGAGACTGTACGGGTTTGGAGGATGCTTGACGGGGGGCGTCGTTTGCATGATTGTGAGGCATTCACTAGCAATAGCATTGAGGTGGCCAATTGAAAGAAAACCTTTTTCTGGAGAGACTACTGGGAAGCCATCTCTGTTGTCGTTGCTTGTTTTTGCTAAGCCACTCAAATTTGCTGTACTATTTACATTTGGCAATGTTTTGGCAGTCGGAAGCACAGCTTTCCTCTTTGGACCTGGGCAACAAATAAGAATGATGTTTGATTCTGTTCGTATTTATGCAACAGCTATTTACCTTGGATGTGTTGTTCTAGCTCTTATATGTGCTCTCTGGATCCACAATAAGATCTTGACAGTGATTGCAATAATCAGTGAGATATGTGCACTTATATGGTATAGTTTGAGCTATATTCCTTTTGCCCGGAGGATGGTCTCTGAATTGATGATCCGATTTTGTGACACAGAACTATAG

Coding sequence (CDS)

ATGTGGAAGCTCAGCCGAGGCGTATTTGGCGATGACGAAGAGCGTGGCCAGAGCTTGTTGGATGAAGATTCAGAAGATCTATGCTCTCTAACTCCCGTACAGAGACTGTACGGGTTTGGAGGATGCTTGACGGGGGGCGTCGTTTGCATGATTGTGAGGCATTCACTAGCAATAGCATTGAGGTGGCCAATTGAAAGAAAACCTTTTTCTGGAGAGACTACTGGGAAGCCATCTCTGTTGTCGTTGCTTGTTTTTGCTAAGCCACTCAAATTTGCTGTACTATTTACATTTGGCAATGTTTTGGCAGTCGGAAGCACAGCTTTCCTCTTTGGACCTGGGCAACAAATAAGAATGATGTTTGATTCTGTTCGTATTTATGCAACAGCTATTTACCTTGGATGTGTTGTTCTAGCTCTTATATGTGCTCTCTGGATCCACAATAAGATCTTGACAGTGATTGCAATAATCAGTGAGATATGTGCACTTATATGGTATAGTTTGAGCTATATTCCTTTTGCCCGGAGGATGGTCTCTGAATTGATGATCCGATTTTGTGACACAGAACTATAG

Protein sequence

MWKLSRGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVRHSLAIALRWPIERKPFSGETTGKPSLLSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSELMIRFCDTEL

Homology

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BLAST of Spg002715 vs. NCBI nr
Match: XP_022141324.1 (vesicle transport protein SFT2B isoform X2 [Momordica charantia])

HSP 1 Score: 302.4 bits (773), Expect = 2.8e-78
Identity = 158/189 (83.60%), Postives = 166/189 (87.83%), Query Frame = 0


Query: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVRHSLAIAL 60
           MWKLSRGVFGDDEERGQSLLDEDSEDLCSL+PVQRLYGFG CLTGGVVCM++  ++ + L
Sbjct: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLSPVQRLYGFGACLTGGVVCMVL--AICLVL 60

Query: 61  RWPIERKPFSGETTGKPSLLSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120
                  P S +        SLLVFAKP+KFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF
Sbjct: 61  MSYTSHYPASTDD------FSLLVFAKPIKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120

Query: 121 DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL 180
           DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL
Sbjct: 121 DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL 180

Query: 181 MIRFCDTEL 190
           MIR CDTEL
Sbjct: 181 MIRLCDTEL 181

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BLAST of Spg002715 vs. NCBI nr
Match: XP_022141325.1 (vesicle transport protein SFT2B isoform X3 [Momordica charantia])

HSP 1 Score: 295.8 bits (756), Expect = 2.6e-76
Identity = 156/189 (82.54%), Postives = 159/189 (84.13%), Query Frame = 0


Query: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVRHSLAIAL 60
           MWKLSRGVFGDDEERGQSLLDEDSEDLCSL+PVQRLYGFG CLTGGVVCM+         
Sbjct: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLSPVQRLYGFGACLTGGVVCMV--------- 60

Query: 61  RWPIERKPFSGETTGKPSLLSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120
                              LSLLVFAKP+KFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF
Sbjct: 61  -------------------LSLLVFAKPIKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120

Query: 121 DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL 180
           DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL
Sbjct: 121 DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL 161

Query: 181 MIRFCDTEL 190
           MIR CDTEL
Sbjct: 181 MIRLCDTEL 161

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BLAST of Spg002715 vs. NCBI nr
Match: XP_038880533.1 (vesicle transport protein SFT2B [Benincasa hispida])

HSP 1 Score: 292.7 bits (748), Expect = 2.2e-75
Identity = 156/189 (82.54%), Postives = 157/189 (83.07%), Query Frame = 0


Query: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVRHSLAIAL 60
           MWKLSRGVF DDEE GQSLLDEDSEDLCSLTPVQRLY FGGCLTGGVVCMI         
Sbjct: 1   MWKLSRGVFVDDEEHGQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMI--------- 60

Query: 61  RWPIERKPFSGETTGKPSLLSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120
                              LSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF
Sbjct: 61  -------------------LSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120

Query: 121 DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL 180
           DSVRIYATAIYLGCVVL LICALWIHNKILTVIA+ISEICALIWYSLSYIPFARRMVSEL
Sbjct: 121 DSVRIYATAIYLGCVVLGLICALWIHNKILTVIAMISEICALIWYSLSYIPFARRMVSEL 161

Query: 181 MIRFCDTEL 190
           MIRFCDTEL
Sbjct: 181 MIRFCDTEL 161

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BLAST of Spg002715 vs. NCBI nr
Match: XP_022945270.1 (vesicle transport protein SFT2B [Cucurbita moschata] >XP_022968626.1 vesicle transport protein SFT2B [Cucurbita maxima] >KAG6574237.1 Vesicle transport protein SFT2B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013303.1 Vesicle transport protein SFT2B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 287.3 bits (734), Expect = 9.3e-74
Identity = 153/189 (80.95%), Postives = 156/189 (82.54%), Query Frame = 0


Query: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVRHSLAIAL 60
           MWKL  GVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIV        
Sbjct: 1   MWKLGLGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIV-------- 60

Query: 61  RWPIERKPFSGETTGKPSLLSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120
                               SLLVFAKP+KFA LFTFGNVLAVGSTAFLFGPGQQ+RMMF
Sbjct: 61  --------------------SLLVFAKPIKFAALFTFGNVLAVGSTAFLFGPGQQMRMMF 120

Query: 121 DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL 180
           DSVRIYATAIYLGCVVLALICAL IHNKILTVIA+ SEICALIWYSLSYIPFARRMVSEL
Sbjct: 121 DSVRIYATAIYLGCVVLALICALLIHNKILTVIAMTSEICALIWYSLSYIPFARRMVSEL 161

Query: 181 MIRFCDTEL 190
           MIRFCDTEL
Sbjct: 181 MIRFCDTEL 161

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BLAST of Spg002715 vs. NCBI nr
Match: XP_008441622.1 (PREDICTED: vesicle transport protein SFT2B [Cucumis melo])

HSP 1 Score: 286.6 bits (732), Expect = 1.6e-73
Identity = 152/189 (80.42%), Postives = 156/189 (82.54%), Query Frame = 0


Query: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVRHSLAIAL 60
           MWKLS GVF DDEER QSLLDEDSEDLCSLTPVQRLY FGGCLTGGVVCMI         
Sbjct: 1   MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMI--------- 60

Query: 61  RWPIERKPFSGETTGKPSLLSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120
                              LSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF
Sbjct: 61  -------------------LSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120

Query: 121 DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL 180
           DSVRI+ATAIYLGCVVLALICALWIHNKILTV A+ISEICALIWYSLSYIPFARRMVS+L
Sbjct: 121 DSVRIFATAIYLGCVVLALICALWIHNKILTVFAMISEICALIWYSLSYIPFARRMVSQL 161

Query: 181 MIRFCDTEL 190
           M+RFCDTEL
Sbjct: 181 MVRFCDTEL 161

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BLAST of Spg002715 vs. ExPASy Swiss-Prot
Match: O95562 (Vesicle transport protein SFT2B OS=Homo sapiens OX=9606 GN=SFT2D2 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.0e-18
Identity = 65/179 (36.31%), Postives = 89/179 (49.72%), Query Frame = 0


Query: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVRHSLAIAL 60
           M KL + + G D E    L   +  +  SL+   R+ GF  C   G++C +    L   L
Sbjct: 1   MDKLKKVLSGQDTEDRSGL--SEVVEASSLSWSTRIKGFIACFAIGILCSL----LGTVL 60

Query: 61  RWPIERKPFSGETTGKPSLLSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120
            W + RK                       FAV +TFGN+ ++GST FL GP +Q++ MF
Sbjct: 61  LW-VPRKGLH-------------------LFAVFYTFGNIASIGSTIFLMGPVKQLKRMF 120

Query: 121 DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSE 180
           +  R+ AT + L C  L L  A W HNK L +I  I +  AL WYSLS+IPFAR  V +
Sbjct: 121 EPTRLIATIMVLLCFALTLCSAFWWHNKGLALIFCILQSLALTWYSLSFIPFARDAVKK 153

[Close]

BLAST of Spg002715 vs. ExPASy Swiss-Prot
Match: Q8WV19 (Vesicle transport protein SFT2A OS=Homo sapiens OX=9606 GN=SFT2D1 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.1e-16
Identity = 69/190 (36.32%), Postives = 93/190 (48.95%), Query Frame = 0


Query: 1   MWKLSRGVFG-DDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVRHSLAIA 60
           M KL R + G DDEE+G   L     D  SL+   RL  F  C   GV   I    L   
Sbjct: 1   MEKLRRVLSGQDDEEQG---LTAQVLDASSLSFNTRLKWFAICFVCGVFFSI----LGTG 60

Query: 61  LRWPIERKPFSGETTGKPSLLSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMM 120
           L W              P  + L        FAV +T GN+ A+ ST FL GP +Q++ M
Sbjct: 61  LLW-------------LPGGIKL--------FAVFYTLGNLAALASTCFLMGPVKQLKKM 120

Query: 121 FDSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSE 180
           F++ R+ AT + L C +  L  ALW H K L V+  I +  ++ WYSLSYIP+AR    +
Sbjct: 121 FEATRLLATIVMLLCFIFTLCAALWWHKKGLAVLFCILQFLSMTWYSLSYIPYAR----D 158

Query: 181 LMIRFCDTEL 190
            +I+ C + L
Sbjct: 181 AVIKCCSSLL 158

[Close]

BLAST of Spg002715 vs. ExPASy Swiss-Prot
Match: Q8VD57 (Vesicle transport protein SFT2B OS=Mus musculus OX=10090 GN=Sft2d2 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.1e-16
Identity = 62/179 (34.64%), Postives = 90/179 (50.28%), Query Frame = 0


Query: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVRHSLAIAL 60
           M KL + + G D E    L   +  +  SL+   R+ GF  C   G++C +    L   L
Sbjct: 1   MDKLKKVLSGQDTEDRSGL--SEVVEASSLSWGTRIKGFIACFALGILCSV----LGTLL 60

Query: 61  RWPIERKPFSGETTGKPSLLSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120
            W + RK                       FAV +T GN++++GST FL GP +Q++ MF
Sbjct: 61  LW-VPRKGLG-------------------LFAVFYTLGNIMSIGSTVFLMGPLKQLKRMF 120

Query: 121 DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSE 180
           +  R+ AT + L C  L L C+ ++ NK L +I  I +  AL WYSLSYIP+AR  V +
Sbjct: 121 EPTRLIATILVLLCFALTL-CSAFLWNKGLALIFCILQSLALTWYSLSYIPYARDAVKK 152

[Close]

BLAST of Spg002715 vs. ExPASy Swiss-Prot
Match: Q5U3Y5 (Vesicle transport protein SFT2A OS=Rattus norvegicus OX=10116 GN=Sft2d1 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.6e-15
Identity = 66/178 (37.08%), Postives = 88/178 (49.44%), Query Frame = 0


Query: 1   MWKLSRGVFG-DDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVRHSLAIA 60
           M KL R + G DDEE+G   L     D  SL+   RL  F  C   G+   I    L   
Sbjct: 1   MEKLRRVLSGQDDEEQG---LTAQVLDASSLSFNTRLKWFVICFVAGIFFSI----LGTG 60

Query: 61  LRWPIERKPFSGETTGKPSLLSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMM 120
           L W              P+ + L        FAV +T GN+ A+ ST FL GP +Q++ M
Sbjct: 61  LLW-------------LPNGVKL--------FAVFYTLGNLAALASTCFLMGPVKQLKKM 120

Query: 121 FDSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMV 178
           F++ R+ AT I L C+V  L  ALW   K L ++  I +  ++ WYSLSYIP+AR  V
Sbjct: 121 FETTRLLATIIMLLCLVFTLCAALWWRKKGLALLFCILQFLSMTWYSLSYIPYARDAV 150

[Close]

BLAST of Spg002715 vs. ExPASy Swiss-Prot
Match: Q5SSN7 (Vesicle transport protein SFT2A OS=Mus musculus OX=10090 GN=Sft2d1 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.5e-13
Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 91  FAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIYATAIYLGCVVLALICALWIHNKIL 150
           FAV +T GN+ A+ ST FL GP +Q++ MF++ R+ AT I L C+V  L  ALW   K L
Sbjct: 64  FAVFYTLGNLAALASTCFLMGPVKQLKKMFETTRLLATIIMLLCLVFTLCAALWWRKKGL 123

Query: 151 TVIAIISEICALIWYSLSYIPFARRMV 178
            ++  I +  ++ WYSLSYIP+AR  V
Sbjct: 124 ALLFCILQFLSMTWYSLSYIPYARDAV 150

[Close]

BLAST of Spg002715 vs. ExPASy TrEMBL
Match: A0A6J1CIC0 (Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111011745 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.4e-78
Identity = 158/189 (83.60%), Postives = 166/189 (87.83%), Query Frame = 0


Query: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVRHSLAIAL 60
           MWKLSRGVFGDDEERGQSLLDEDSEDLCSL+PVQRLYGFG CLTGGVVCM++  ++ + L
Sbjct: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLSPVQRLYGFGACLTGGVVCMVL--AICLVL 60

Query: 61  RWPIERKPFSGETTGKPSLLSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120
                  P S +        SLLVFAKP+KFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF
Sbjct: 61  MSYTSHYPASTDD------FSLLVFAKPIKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120

Query: 121 DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL 180
           DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL
Sbjct: 121 DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL 180

Query: 181 MIRFCDTEL 190
           MIR CDTEL
Sbjct: 181 MIRLCDTEL 181

[Close]

BLAST of Spg002715 vs. ExPASy TrEMBL
Match: A0A6J1CHR6 (Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111011745 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.3e-76
Identity = 156/189 (82.54%), Postives = 159/189 (84.13%), Query Frame = 0


Query: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVRHSLAIAL 60
           MWKLSRGVFGDDEERGQSLLDEDSEDLCSL+PVQRLYGFG CLTGGVVCM+         
Sbjct: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLSPVQRLYGFGACLTGGVVCMV--------- 60

Query: 61  RWPIERKPFSGETTGKPSLLSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120
                              LSLLVFAKP+KFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF
Sbjct: 61  -------------------LSLLVFAKPIKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120

Query: 121 DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL 180
           DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL
Sbjct: 121 DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL 161

Query: 181 MIRFCDTEL 190
           MIR CDTEL
Sbjct: 181 MIRLCDTEL 161

[Close]

BLAST of Spg002715 vs. ExPASy TrEMBL
Match: A0A6J1HVF1 (Vesicle transport protein OS=Cucurbita maxima OX=3661 GN=LOC111467788 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.5e-74
Identity = 153/189 (80.95%), Postives = 156/189 (82.54%), Query Frame = 0


Query: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVRHSLAIAL 60
           MWKL  GVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIV        
Sbjct: 1   MWKLGLGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIV-------- 60

Query: 61  RWPIERKPFSGETTGKPSLLSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120
                               SLLVFAKP+KFA LFTFGNVLAVGSTAFLFGPGQQ+RMMF
Sbjct: 61  --------------------SLLVFAKPIKFAALFTFGNVLAVGSTAFLFGPGQQMRMMF 120

Query: 121 DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL 180
           DSVRIYATAIYLGCVVLALICAL IHNKILTVIA+ SEICALIWYSLSYIPFARRMVSEL
Sbjct: 121 DSVRIYATAIYLGCVVLALICALLIHNKILTVIAMTSEICALIWYSLSYIPFARRMVSEL 161

Query: 181 MIRFCDTEL 190
           MIRFCDTEL
Sbjct: 181 MIRFCDTEL 161

[Close]

BLAST of Spg002715 vs. ExPASy TrEMBL
Match: A0A6J1G0G6 (Vesicle transport protein OS=Cucurbita moschata OX=3662 GN=LOC111449568 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.5e-74
Identity = 153/189 (80.95%), Postives = 156/189 (82.54%), Query Frame = 0


Query: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVRHSLAIAL 60
           MWKL  GVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIV        
Sbjct: 1   MWKLGLGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIV-------- 60

Query: 61  RWPIERKPFSGETTGKPSLLSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120
                               SLLVFAKP+KFA LFTFGNVLAVGSTAFLFGPGQQ+RMMF
Sbjct: 61  --------------------SLLVFAKPIKFAALFTFGNVLAVGSTAFLFGPGQQMRMMF 120

Query: 121 DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL 180
           DSVRIYATAIYLGCVVLALICAL IHNKILTVIA+ SEICALIWYSLSYIPFARRMVSEL
Sbjct: 121 DSVRIYATAIYLGCVVLALICALLIHNKILTVIAMTSEICALIWYSLSYIPFARRMVSEL 161

Query: 181 MIRFCDTEL 190
           MIRFCDTEL
Sbjct: 181 MIRFCDTEL 161

[Close]

BLAST of Spg002715 vs. ExPASy TrEMBL
Match: A0A1S3B3W0 (Vesicle transport protein OS=Cucumis melo OX=3656 GN=LOC103485702 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.7e-74
Identity = 152/189 (80.42%), Postives = 156/189 (82.54%), Query Frame = 0


Query: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVRHSLAIAL 60
           MWKLS GVF DDEER QSLLDEDSEDLCSLTPVQRLY FGGCLTGGVVCMI         
Sbjct: 1   MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMI--------- 60

Query: 61  RWPIERKPFSGETTGKPSLLSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120
                              LSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF
Sbjct: 61  -------------------LSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMF 120

Query: 121 DSVRIYATAIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSEL 180
           DSVRI+ATAIYLGCVVLALICALWIHNKILTV A+ISEICALIWYSLSYIPFARRMVS+L
Sbjct: 121 DSVRIFATAIYLGCVVLALICALWIHNKILTVFAMISEICALIWYSLSYIPFARRMVSQL 161

Query: 181 MIRFCDTEL 190
           M+RFCDTEL
Sbjct: 181 MVRFCDTEL 161

[Close]

BLAST of Spg002715 vs. TAIR 10
Match: AT5G24170.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 189.5 bits (480), Expect = 2.5e-48
Identity = 103/180 (57.22%), Postives = 124/180 (68.89%), Query Frame = 0


Query: 10  GDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVRHSLAIALRWPIERKPF 69
           GD +    S L++ SE LC+L+  QR+YGF   L  G++ M                   
Sbjct: 12  GDGDGTTDSFLEDGSEGLCALSTTQRMYGFAASLATGLLLM------------------- 71

Query: 70  SGETTGKPSLLSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIYATA 129
                     LS++VF  P+KFA+LFTFGNVLA+GSTAFL GP QQ+ MMFD VR  AT+
Sbjct: 72  ---------FLSMIVFGIPIKFALLFTFGNVLAIGSTAFLMGPEQQMSMMFDPVRFLATS 131

Query: 130 IYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSELMIRFCDTEL 189
           IY+GCVV+ALICAL IH+KILTV+AI+ EICALIWYSLSYIPFARRMVSE+MIR CDTEL
Sbjct: 132 IYIGCVVVALICALLIHSKILTVLAILCEICALIWYSLSYIPFARRMVSEIMIRLCDTEL 163

[Close]

BLAST of Spg002715 vs. TAIR 10
Match: AT5G23550.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 151.4 bits (381), Expect = 7.4e-37
Identity = 84/177 (47.46%), Postives = 109/177 (61.58%), Query Frame = 0


Query: 12  DEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVRHSLAIALRWPIERKPFSG 71
           DEE   S + ED    C+LT  QR YGF  CL+ G+ C                      
Sbjct: 27  DEESSLSFM-EDLNRNCALTTKQRFYGFAICLSAGLTC---------------------- 86

Query: 72  ETTGKPSLLSLLVFAKPLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIYATAIY 131
                 +LLS+LVF  P+KF + FT GN++A+GSTAFL GP +Q+ MM D  RIYATA+Y
Sbjct: 87  ------TLLSMLVFFNPVKFGITFTLGNLMALGSTAFLIGPQRQVTMMLDPARIYATALY 146

Query: 132 LGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSELMIRFCDTE 189
           L  +++AL CAL++ NK+LT++AII E   LIWYSLSYIPFAR MVS++ +   DTE
Sbjct: 147 LASIIIALFCALYVRNKLLTLLAIILEFTGLIWYSLSYIPFARTMVSKIFMTCFDTE 174

[Close]

BLAST of Spg002715 vs. TAIR 10
Match: AT4G26550.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 46.2 bits (108), Expect = 3.4e-05
Identity = 27/84 (32.14%), Postives = 48/84 (57.14%), Query Frame = 0


Query: 88  PLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIYATAIYLGCVVLALICALWIHN 147
           P KFA+ FT G    +GS   L GP  Q+  M    R+ +T  ++  +V  +  ++ +H+
Sbjct: 119 PQKFAICFTLGCGFIIGSFFALRGPKNQLAHMSSMERLPSTLGFIATMVGTIYVSMVLHS 178

Query: 148 KILTVIAIISEICALIWYSLSYIP 172
            IL+V+  + ++ AL++Y +SY P
Sbjct: 179 YILSVLFSVLQVLALVYYCISYFP 202

[Close]

BLAST of Spg002715 vs. TAIR 10
Match: AT5G56020.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 43.9 bits (102), Expect = 1.7e-04
Identity = 28/84 (33.33%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 88  PLKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIYATAIYLGCVVLALICALWIHN 147
           P KFA+ FT G    +GS   L GP  Q+  M  + R+  T  ++  +V  +  ++ +H+
Sbjct: 124 PQKFAICFTLGCGFIIGSFFALRGPQNQLAHMSSAERLPLTLGFIATMVGTIYVSMVLHS 183

Query: 148 KILTVIAIISEICALIWYSLSYIP 172
            IL+VI    ++ AL +Y +SY P
Sbjct: 184 YILSVIFSALQVIALAYYCISYFP 207

The following BLAST results are available for this feature:

BLAST of Spg002715 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141324.1	2.8e-78	83.60	vesicle transport protein SFT2B isoform X2 [Momordica charantia]	[more]
XP_022141325.1	2.6e-76	82.54	vesicle transport protein SFT2B isoform X3 [Momordica charantia]	[more]
XP_038880533.1	2.2e-75	82.54	vesicle transport protein SFT2B [Benincasa hispida]	[more]
XP_022945270.1	9.3e-74	80.95	vesicle transport protein SFT2B [Cucurbita moschata] >XP_022968626.1 vesicle tra...	[more]
XP_008441622.1	1.6e-73	80.42	PREDICTED: vesicle transport protein SFT2B [Cucumis melo]	[more]

BLAST of Spg002715 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O95562	2.0e-18	36.31	Vesicle transport protein SFT2B OS=Homo sapiens OX=9606 GN=SFT2D2 PE=1 SV=1	[more]
Q8WV19	4.1e-16	36.32	Vesicle transport protein SFT2A OS=Homo sapiens OX=9606 GN=SFT2D1 PE=1 SV=1	[more]
Q8VD57	4.1e-16	34.64	Vesicle transport protein SFT2B OS=Mus musculus OX=10090 GN=Sft2d2 PE=1 SV=1	[more]
Q5U3Y5	4.6e-15	37.08	Vesicle transport protein SFT2A OS=Rattus norvegicus OX=10116 GN=Sft2d1 PE=2 SV=...	[more]
Q5SSN7	1.5e-13	47.13	Vesicle transport protein SFT2A OS=Mus musculus OX=10090 GN=Sft2d1 PE=1 SV=1	[more]

BLAST of Spg002715 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CIC0	1.4e-78	83.60	Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111011745 PE=3 SV...	[more]
A0A6J1CHR6	1.3e-76	82.54	Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111011745 PE=3 SV...	[more]
A0A6J1HVF1	4.5e-74	80.95	Vesicle transport protein OS=Cucurbita maxima OX=3661 GN=LOC111467788 PE=3 SV=1	[more]
A0A6J1G0G6	4.5e-74	80.95	Vesicle transport protein OS=Cucurbita moschata OX=3662 GN=LOC111449568 PE=3 SV=...	[more]
A0A1S3B3W0	7.7e-74	80.42	Vesicle transport protein OS=Cucumis melo OX=3656 GN=LOC103485702 PE=3 SV=1	[more]

BLAST of Spg002715 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24170.1	2.5e-48	57.22	Got1/Sft2-like vescicle transport protein family	[more]
AT5G23550.1	7.4e-37	47.46	Got1/Sft2-like vescicle transport protein family	[more]
AT4G26550.1	3.4e-05	32.14	Got1/Sft2-like vescicle transport protein family	[more]
AT5G56020.1	1.7e-04	33.33	Got1/Sft2-like vescicle transport protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007305	Vesicle transport protein, Got1/SFT2-like	PFAM	PF04178	Got1	coord: 79..180 e-value: 3.7E-34 score: 117.5
IPR011691	Vesicle transport protein SFT2	PANTHER	PTHR23137	UNCHARACTERIZED	coord: 79..189
IPR011691	Vesicle transport protein SFT2	PANTHER	PTHR23137	UNCHARACTERIZED	coord: 5..52
None	No IPR available	PANTHER	PTHR23137:SF29	VESICLE TRANSPORT PROTEIN	coord: 5..52
None	No IPR available	PANTHER	PTHR23137:SF29	VESICLE TRANSPORT PROTEIN	coord: 79..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg002715.1	Spg002715.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane