Spg002589 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg002589
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Cyclin
Location	scaffold6: 3013204 .. 3015657 (+)
RNA-Seq Expression	Spg002589
Synteny	Spg002589

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGATCAATTGGATCATCATCAGAATCAAATGGTTCCAATCCCCAAAGTCATCACTTTTCTTTCATCTCTTTTGCAGAGAGTTTCAGAGTCCAATGACCAAAGCCTTGAGCTTCAAAGCGTGGCCAAAGTTTCAGCCTTTCATGGCTTGACAAGGCCAACCATATCCATTCAAAGCTACTTGGAGAGGATCTTTAAGTATGCAAATTGCAGCCCAAGTTGCTTTGTTGTGGCTTATGTTTATCTTGATCGCTTCGTTCAGCGCCAGCCTTCTTTGCCCATTGATTCCTTCAATGTTCATAGGCTTCTCATTACCAGTGTTCTTGTCTCTGCTAAGTTCTTGGATGACTTGTAAGTTCTCTCTTCTCCTTGATCTCTGGTTTGAGTTTGATCCTTTTCGCAATTTACTCGAATTGGGTTCGGTAAAAGATTAAATTTACCGTGATGGGTAAGAAACAATTTTGGGTTTAGCGATCTTTTTATTTATCTTAGAATAATGTGTGGCAGGTGACGTTTGAATTATTAGGGGTAAGAGAAAGAAATTAATGTAAAAATTTGACTAGGGTGTATGTAGTGGTTAAATTGGTATGACTATCTGTTTGATATAGACATGTGACATTCATTTTGTAACGTCTCATACAAGTAATCAATGGAGGTTAATTATCATAGCATTCGAAAATTTCCTTGATTTTTAGAGAGATACATTATGACAGCTAAGTTGAATAAATTTCTCCCTCTACCATCTATTTGAATTGGGTTTTTCTTGATTGGTATTGATTCTCTCTCTTCAAATTGCATTTAAGATTTATGTATTCAAAGTTTTTCCCCTCTTCATATAAAGCTTTATTTATTTATTTATTTTCCTTAGTTTTTTTTTTTCTTTTAATAAATGAGAGTATGAAGATTTGTACATCTAACCTTAAGAGAAGGACTACACTGAATTACTATATAGTTATGTTTACTTTGATATTTTAGTCTCAATTTTATGTAAGGAAAGTGATGAGATTGAATAATTTAATAATGAGATTAAAGTTAGAGTTTCAAAAAGTTTTAATTTTAATTTATTGTATTATTGACTGCCCTAACCTGATTTGAAAAAGAACATTTATTGACTTTATTTCCATCAAAGTTAAAAATTATGACTTTTTTTTTTTTAAAAAAAAAGTTTTGGAGGTCAAATCTACACTGTTCTTGCATTCTTCTTCCTTTAATTTGTCATGTTCAAAATTAATATATTATTTTTATAAAATTGTTTATTGACTTTATTTCCATCAAAGTTAAAAAATTGATGAGTTCTTTTTTTGGGGGATTTTTTTTTCAGGTACTACAACAATGCCTACTATGCCAAAGTGGGTGGAATAAGCACCATGGAAATGAACCTTCTTGAAGTGGATTTCTTATTTGGTTTGGGATTCCAACTCAATGTGACACCAAACACTTTTCACACTTATTGTTCCTATCTCCAAACAGAAATTCTATTAACACAACCCAATCTTCAAATCAAATCATCCATAAAACTTCATTCCTTCACCGAAGAAGAAACGTCTCATAAAAAACAATTGACGGTCTAAATCACCAGAAATCATTAGAAGTGACCACGAAGATGTGACTTTCACTTTAACCATAATCGTTAAATACATCACTATGAAGTAACTTCTTTTATCCTTCAATGAATTTAATGATTATGACAGTGACGGTCACACCCAATATGATGAAAATCCAAAATTAGAAAGTCTTTCAGGTGGACTGGGAACCTTCTTGGGGTTAAATGTGGGTTTTTTTCTCTCAAGCTTTTTGGGCCCAAGAAAAGCATGAAAAGTCTCCCACTTGGGTTTTTGTAGTTGTTGGACATTTTTGCCCTCCATGTCTATTGTGTAGAATTGTATTTTGATGATTTTTGTATGTAAGTATAGATTACCATGTTTTGATGAGTGTGTTCACACGTAACTTCGGAGATGGAGACACGTGGAATAATCAATATATTTGTATTAATGTAATATGCGTGTGAGTGTACAATCTCTAATGTTAATCCTCTGATTCTCTCTCTTGTGTGTGAATGTGTTTCACTCGAGGGCTGGAACGCTTGATCTCGAGTCTGAAGTTTTAACGGATTCTTGGAGCTTGAAGTCTTCCAGTCTTGAAGGAGTCTTCAATCTTCAAGAAGTGTTGATGTCCTGAAGAGTCTTTGATCTTCAAGGAGTGTTGAAGCCTTGAAGAGTGTTTGGTCTTCAAGAAGTGTTGACGTCCTGGAGAGTATTTGATCTTCAAGGAGTGTTGAAGTCTTGAAGAGTGTTTGGTTTTCAAGAAGTGTTCAACACTTGAATTTATGGATTGCAGAGAGTCTTCGGTCTTCAGACTTGGTGGAGTCTCTCTGAATTCTCTGGTTCTGCTTGAGAGCTTTGAAACTCTGAACTCTTGTCTTTGTGAGAGTCTAGAATTTCTGAACCCTTGA

mRNA sequence

ATGGCAGATCAATTGGATCATCATCAGAATCAAATGGTTCCAATCCCCAAAGTCATCACTTTTCTTTCATCTCTTTTGCAGAGAGTTTCAGAGTCCAATGACCAAAGCCTTGAGCTTCAAAGCGTGGCCAAAGTTTCAGCCTTTCATGGCTTGACAAGGCCAACCATATCCATTCAAAGCTACTTGGAGAGGATCTTTAAGTATGCAAATTGCAGCCCAAGTTGCTTTGTTGTGGCTTATGTTTATCTTGATCGCTTCGTTCAGCGCCAGCCTTCTTTGCCCATTGATTCCTTCAATGTTCATAGGCTTCTCATTACCAGTGTTCTTGTCTCTGCTAAGTTCTTGGATGACTTAGAGTCTTCGGTCTTCAGACTTGGTGGAGTCTCTCTGAATTCTCTGGTTCTGCTTGAGAGCTTTGAAACTCTGAACTCTTGTCTTTGTGAGAGTCTAGAATTTCTGAACCCTTGA

Coding sequence (CDS)

ATGGCAGATCAATTGGATCATCATCAGAATCAAATGGTTCCAATCCCCAAAGTCATCACTTTTCTTTCATCTCTTTTGCAGAGAGTTTCAGAGTCCAATGACCAAAGCCTTGAGCTTCAAAGCGTGGCCAAAGTTTCAGCCTTTCATGGCTTGACAAGGCCAACCATATCCATTCAAAGCTACTTGGAGAGGATCTTTAAGTATGCAAATTGCAGCCCAAGTTGCTTTGTTGTGGCTTATGTTTATCTTGATCGCTTCGTTCAGCGCCAGCCTTCTTTGCCCATTGATTCCTTCAATGTTCATAGGCTTCTCATTACCAGTGTTCTTGTCTCTGCTAAGTTCTTGGATGACTTAGAGTCTTCGGTCTTCAGACTTGGTGGAGTCTCTCTGAATTCTCTGGTTCTGCTTGAGAGCTTTGAAACTCTGAACTCTTGTCTTTGTGAGAGTCTAGAATTTCTGAACCCTTGA

Protein sequence

MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFLDDLESSVFRLGGVSLNSLVLLESFETLNSCLCESLEFLNP

Homology

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BLAST of Spg002589 vs. NCBI nr
Match: XP_022941693.1 (cyclin-U4-1-like [Cucurbita moschata])

HSP 1 Score: 208.0 bits (528), Expect = 5.9e-50
Identity = 111/140 (79.29%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 1   MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQS 60
           MAD LDHH    VPIPKVITFLSSLLQRVSESNDQS EL S AKVSAFHGLT+PTISIQ+
Sbjct: 1   MAD-LDHHNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQT 60

Query: 61  YLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFLDDL-- 120
           YLERIFKYANCSPSCFVVAYVYLDR  QR PSLPIDSFNVHRLLITSVLVSAKFLDDL  
Sbjct: 61  YLERIFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCY 120

Query: 121 -ESSVFRLGGVSLNSLVLLE 138
             +   ++GG+S   + LLE
Sbjct: 121 NNAYYAKVGGISTVEMNLLE 139

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BLAST of Spg002589 vs. NCBI nr
Match: XP_022992955.1 (cyclin-U4-1-like [Cucurbita maxima])

HSP 1 Score: 206.8 bits (525), Expect = 1.3e-49
Identity = 111/140 (79.29%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 1   MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQS 60
           MAD LDH     VPIPKVITFLSSLLQRVSESNDQS EL S AKVSAFHGLT+PTISIQ+
Sbjct: 1   MAD-LDHRNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQT 60

Query: 61  YLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFLDDL-- 120
           YLERIFKYANCSPSCFVVAYVYLDR VQR PSLPIDSFNVHRLLITSVLVSAKFLDDL  
Sbjct: 61  YLERIFKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCY 120

Query: 121 -ESSVFRLGGVSLNSLVLLE 138
             +   ++GG+S   + LLE
Sbjct: 121 NNAYYAKVGGISTMEMNLLE 139

[Close]

BLAST of Spg002589 vs. NCBI nr
Match: XP_023526236.1 (cyclin-U4-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.5 bits (524), Expect = 1.7e-49
Identity = 110/140 (78.57%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 1   MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQS 60
           MAD LDHH    VPIPKVITFLSSLLQRVSESNDQS +L S AKVSAFHGLT+PTISIQ+
Sbjct: 1   MAD-LDHHNQMAVPIPKVITFLSSLLQRVSESNDQSHQLHSAAKVSAFHGLTKPTISIQT 60

Query: 61  YLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFLDDL-- 120
           YLERIFKYANCSPSCFVVAYVYLDR  QR PSLPIDSFNVHRLLITSVLVSAKFLDDL  
Sbjct: 61  YLERIFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCY 120

Query: 121 -ESSVFRLGGVSLNSLVLLE 138
             +   ++GG+S   + LLE
Sbjct: 121 NNAYYAKVGGISRVEMNLLE 139

[Close]

BLAST of Spg002589 vs. NCBI nr
Match: KAG6600208.1 (Cyclin-U4-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030869.1 Cyclin-U4-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203.4 bits (516), Expect = 1.4e-48
Identity = 108/140 (77.14%), Postives = 116/140 (82.86%), Query Frame = 0


Query: 1   MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQS 60
           MAD LDHH    VPIPKVITFLSSLLQRVSESNDQS +L S AK SAFHGLT+PTISIQ+
Sbjct: 1   MAD-LDHHNQMAVPIPKVITFLSSLLQRVSESNDQSHQLHSAAKASAFHGLTKPTISIQT 60

Query: 61  YLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFLDDL-- 120
           YLERIFKYANCSPSCFVVAYVYLDR  QR PSLPID FNVHRLLITSVLVSAKFLDDL  
Sbjct: 61  YLERIFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDPFNVHRLLITSVLVSAKFLDDLCY 120

Query: 121 -ESSVFRLGGVSLNSLVLLE 138
             +   ++GG+S   + LLE
Sbjct: 121 NNAYYAKVGGISTVEMNLLE 139

[Close]

BLAST of Spg002589 vs. NCBI nr
Match: OMO94810.1 (hypothetical protein CCACVL1_05802 [Corchorus capsularis])

HSP 1 Score: 180.6 bits (457), Expect = 1.0e-41
Identity = 94/131 (71.76%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 10  NQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYA 69
           N+   +PKVITFLSSLLQRV+ESND S   QS  K+S FHGLTRPTISI++YLERIFKYA
Sbjct: 6   NEQETVPKVITFLSSLLQRVAESNDHSRRFQS-QKISVFHGLTRPTISIRTYLERIFKYA 65

Query: 70  NCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFLDDL---ESSVFRLG 129
           NCSPSCFVVAYVYLDRFVQ QPSLP++SFNVHRLLITSVLVSAKF+DD+    +   ++G
Sbjct: 66  NCSPSCFVVAYVYLDRFVQMQPSLPLNSFNVHRLLITSVLVSAKFMDDIYYNNAYYAKVG 125

Query: 130 GVSLNSLVLLE 138
           G+S   + LLE
Sbjct: 126 GISTAEMNLLE 135

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BLAST of Spg002589 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.2e-39
Identity = 85/125 (68.00%), Postives = 103/125 (82.40%), Query Frame = 0


Query: 17  KVITFLSSLLQRVSESNDQSLELQSVA-KVSAFHGLTRPTISIQSYLERIFKYANCSPSC 76
           K+I FLSSLL+RV+ESND +  + + + +VS FHGL+RPTI+IQSYLERIFKYANCSPSC
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 77  FVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNS 136
           FVVAYVYLDRF  RQPSLPI+SFNVHRLLITSV+V+AKFLDDL    +   ++GG+S   
Sbjct: 72  FVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKE 131

Query: 137 LVLLE 138
           +  LE
Sbjct: 132 MNFLE 136

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BLAST of Spg002589 vs. ExPASy Swiss-Prot
Match: Q9LY16 (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-36
Identity = 84/146 (57.53%), Postives = 110/146 (75.34%), Query Frame = 0


Query: 1   MADQLD----HHQNQMVPI-PKVITFLSSLLQRVSESNDQ-SLELQSVAKVSAFHGLTRP 60
           MA Q+D    H Q  M  I P VIT +SSLLQRVSE+ND  S   +   ++SAF+ +T+P
Sbjct: 1   MAYQIDQKMIHDQEPMAEIMPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKP 60

Query: 61  TISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKF 120
           +ISI+SY+ERIFKYA+CS SC++VAY+YLDRF+Q+QP LPIDS NVHRL+ITSVLVSAKF
Sbjct: 61  SISIRSYMERIFKYADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKF 120

Query: 121 LDDL---ESSVFRLGGVSLNSLVLLE 138
           +DDL    +   ++GG++   + LLE
Sbjct: 121 MDDLCYNNAFYAKVGGITTEEMNLLE 146

[Close]

BLAST of Spg002589 vs. ExPASy Swiss-Prot
Match: Q9FKF6 (Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.3e-35
Identity = 82/147 (55.78%), Postives = 110/147 (74.83%), Query Frame = 0


Query: 1   MADQLD---HHQNQMVPI----PKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTR 60
           MADQ++    +Q+   P+    P V+T +S LLQRVSE+ND    L    K S+F G+T+
Sbjct: 1   MADQIEIQRMNQDLQEPLAEIMPSVLTAMSYLLQRVSETND---NLSQKQKPSSFTGVTK 60

Query: 61  PTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAK 120
           P+ISI+SYLERIF+YANCS SC++VAY+YLDRFV++QP LPI+SFNVHRL+ITSVLVSAK
Sbjct: 61  PSISIRSYLERIFEYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAK 120

Query: 121 FLDDLESS---VFRLGGVSLNSLVLLE 138
           F+DDL  +     ++GG+S   + +LE
Sbjct: 121 FMDDLSYNNEYYAKVGGISREEMNMLE 144

[Close]

BLAST of Spg002589 vs. ExPASy Swiss-Prot
Match: Q7XC35 (Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 7.3e-35
Identity = 76/130 (58.46%), Postives = 99/130 (76.15%), Query Frame = 0


Query: 15  IPKVITFLSSLLQRVSESNDQSLELQSV----AKVSAFHGLTRPTISIQSYLERIFKYAN 74
           +P+V+  LSSLLQRV+E ND +    +V    A VSAF GLT+P ISI  YLERIF++AN
Sbjct: 10  VPRVVAILSSLLQRVAERNDAAAAAAAVGEEAAAVSAFQGLTKPAISIGGYLERIFRFAN 69

Query: 75  CSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFLDDL---ESSVFRLGG 134
           CSPSC+VVAY+YLDRF++R+P+L +DSFNVHRLLITSVL + KF+DD+    +   R+GG
Sbjct: 70  CSPSCYVVAYIYLDRFLRRRPALAVDSFNVHRLLITSVLTAVKFVDDICYNNAYFARVGG 129

Query: 135 VSLNSLVLLE 138
           +SL  +  LE
Sbjct: 130 ISLMEMNYLE 139

[Close]

BLAST of Spg002589 vs. ExPASy Swiss-Prot
Match: Q9LJ45 (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.1e-22
Identity = 55/127 (43.31%), Postives = 83/127 (65.35%), Query Frame = 0


Query: 16  PKVITFLSSLLQRVSESND-QSLELQSVAK-VSAFHGLTRPTISIQSYLERIFKYANCSP 75
           P+V+T +S +++++   N+  + + +   K + AFHG+  P+ISI  YLERI+KY  CSP
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSP 84

Query: 76  SCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFLDDLESS---VFRLGGVSL 135
           +CFVV YVY+DR   + P   + S NVHRLL+T V+++AK LDD+  +     R+GGVS 
Sbjct: 85  ACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSN 144

Query: 136 NSLVLLE 138
             L  +E
Sbjct: 145 ADLNKME 151

[Close]

BLAST of Spg002589 vs. ExPASy TrEMBL
Match: A0A6J1FSU2 (Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111446976 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.8e-50
Identity = 111/140 (79.29%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 1   MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQS 60
           MAD LDHH    VPIPKVITFLSSLLQRVSESNDQS EL S AKVSAFHGLT+PTISIQ+
Sbjct: 1   MAD-LDHHNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQT 60

Query: 61  YLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFLDDL-- 120
           YLERIFKYANCSPSCFVVAYVYLDR  QR PSLPIDSFNVHRLLITSVLVSAKFLDDL  
Sbjct: 61  YLERIFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCY 120

Query: 121 -ESSVFRLGGVSLNSLVLLE 138
             +   ++GG+S   + LLE
Sbjct: 121 NNAYYAKVGGISTVEMNLLE 139

[Close]

BLAST of Spg002589 vs. ExPASy TrEMBL
Match: A0A6J1JX61 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111489131 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 6.3e-50
Identity = 111/140 (79.29%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 1   MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQS 60
           MAD LDH     VPIPKVITFLSSLLQRVSESNDQS EL S AKVSAFHGLT+PTISIQ+
Sbjct: 1   MAD-LDHRNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQT 60

Query: 61  YLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFLDDL-- 120
           YLERIFKYANCSPSCFVVAYVYLDR VQR PSLPIDSFNVHRLLITSVLVSAKFLDDL  
Sbjct: 61  YLERIFKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCY 120

Query: 121 -ESSVFRLGGVSLNSLVLLE 138
             +   ++GG+S   + LLE
Sbjct: 121 NNAYYAKVGGISTMEMNLLE 139

[Close]

BLAST of Spg002589 vs. ExPASy TrEMBL
Match: A0A1R3JJ39 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_05802 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.9e-42
Identity = 94/131 (71.76%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 10  NQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYA 69
           N+   +PKVITFLSSLLQRV+ESND S   QS  K+S FHGLTRPTISI++YLERIFKYA
Sbjct: 6   NEQETVPKVITFLSSLLQRVAESNDHSRRFQS-QKISVFHGLTRPTISIRTYLERIFKYA 65

Query: 70  NCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFLDDL---ESSVFRLG 129
           NCSPSCFVVAYVYLDRFVQ QPSLP++SFNVHRLLITSVLVSAKF+DD+    +   ++G
Sbjct: 66  NCSPSCFVVAYVYLDRFVQMQPSLPLNSFNVHRLLITSVLVSAKFMDDIYYNNAYYAKVG 125

Query: 130 GVSLNSLVLLE 138
           G+S   + LLE
Sbjct: 126 GISTAEMNLLE 135

[Close]

BLAST of Spg002589 vs. ExPASy TrEMBL
Match: A0A6J1AHH9 (Cyclin OS=Herrania umbratica OX=108875 GN=LOC110418289 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.9e-41
Identity = 94/126 (74.60%), Postives = 106/126 (84.13%), Query Frame = 0


Query: 15  IPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPS 74
           +PKVITFLSSLLQRV+ESND S   QS  K+S FHGLTRPTISI+SYLERIFKYANCSPS
Sbjct: 15  VPKVITFLSSLLQRVAESNDHSRRFQS-QKISVFHGLTRPTISIRSYLERIFKYANCSPS 74

Query: 75  CFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFLDDL---ESSVFRLGGVSLN 134
           CFVVAYVYLDRFVQ QPSLPI+ FNVHRLLITSVLVSAKF+DD+    +   ++GG+S  
Sbjct: 75  CFVVAYVYLDRFVQMQPSLPINPFNVHRLLITSVLVSAKFMDDIYYNNAYYAKVGGISTV 134

Query: 135 SLVLLE 138
            + LLE
Sbjct: 135 EMNLLE 139

[Close]

BLAST of Spg002589 vs. ExPASy TrEMBL
Match: A0A061G061 (Cyclin OS=Theobroma cacao OX=3641 GN=TCM_014820 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.9e-41
Identity = 95/126 (75.40%), Postives = 106/126 (84.13%), Query Frame = 0


Query: 15  IPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPS 74
           +PKVITFLSSLLQRV+ESND    LQS   +S FHGLTRPTISI+SYLERIFKYANCSPS
Sbjct: 15  VPKVITFLSSLLQRVAESNDHIRRLQS-QNISVFHGLTRPTISIRSYLERIFKYANCSPS 74

Query: 75  CFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFLDDL---ESSVFRLGGVSLN 134
           CFVVAYVYLDRFVQ QPSLPI+SFNVHRLLITSVLVSAKF+DD+    +   ++GG+S  
Sbjct: 75  CFVVAYVYLDRFVQMQPSLPINSFNVHRLLITSVLVSAKFMDDIYYNNAYYAKVGGISTV 134

Query: 135 SLVLLE 138
            L LLE
Sbjct: 135 ELNLLE 139

[Close]

BLAST of Spg002589 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 )

HSP 1 Score: 163.3 bits (412), Expect = 1.5e-40
Identity = 85/125 (68.00%), Postives = 103/125 (82.40%), Query Frame = 0


Query: 17  KVITFLSSLLQRVSESNDQSLELQSVA-KVSAFHGLTRPTISIQSYLERIFKYANCSPSC 76
           K+I FLSSLL+RV+ESND +  + + + +VS FHGL+RPTI+IQSYLERIFKYANCSPSC
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 77  FVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNS 136
           FVVAYVYLDRF  RQPSLPI+SFNVHRLLITSV+V+AKFLDDL    +   ++GG+S   
Sbjct: 72  FVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKE 131

Query: 137 LVLLE 138
           +  LE
Sbjct: 132 MNFLE 136

[Close]

BLAST of Spg002589 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 )

HSP 1 Score: 154.1 bits (388), Expect = 9.4e-38
Identity = 84/146 (57.53%), Postives = 110/146 (75.34%), Query Frame = 0


Query: 1   MADQLD----HHQNQMVPI-PKVITFLSSLLQRVSESNDQ-SLELQSVAKVSAFHGLTRP 60
           MA Q+D    H Q  M  I P VIT +SSLLQRVSE+ND  S   +   ++SAF+ +T+P
Sbjct: 1   MAYQIDQKMIHDQEPMAEIMPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKP 60

Query: 61  TISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKF 120
           +ISI+SY+ERIFKYA+CS SC++VAY+YLDRF+Q+QP LPIDS NVHRL+ITSVLVSAKF
Sbjct: 61  SISIRSYMERIFKYADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKF 120

Query: 121 LDDL---ESSVFRLGGVSLNSLVLLE 138
           +DDL    +   ++GG++   + LLE
Sbjct: 121 MDDLCYNNAFYAKVGGITTEEMNLLE 146

[Close]

BLAST of Spg002589 vs. TAIR 10
Match: AT5G61650.1 (CYCLIN P4;2 )

HSP 1 Score: 149.1 bits (375), Expect = 3.0e-36
Identity = 82/147 (55.78%), Postives = 110/147 (74.83%), Query Frame = 0


Query: 1   MADQLD---HHQNQMVPI----PKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTR 60
           MADQ++    +Q+   P+    P V+T +S LLQRVSE+ND    L    K S+F G+T+
Sbjct: 1   MADQIEIQRMNQDLQEPLAEIMPSVLTAMSYLLQRVSETND---NLSQKQKPSSFTGVTK 60

Query: 61  PTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAK 120
           P+ISI+SYLERIF+YANCS SC++VAY+YLDRFV++QP LPI+SFNVHRL+ITSVLVSAK
Sbjct: 61  PSISIRSYLERIFEYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAK 120

Query: 121 FLDDLESS---VFRLGGVSLNSLVLLE 138
           F+DDL  +     ++GG+S   + +LE
Sbjct: 121 FMDDLSYNNEYYAKVGGISREEMNMLE 144

[Close]

BLAST of Spg002589 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 )

HSP 1 Score: 105.9 bits (263), Expect = 2.9e-23
Identity = 55/127 (43.31%), Postives = 83/127 (65.35%), Query Frame = 0


Query: 16  PKVITFLSSLLQRVSESND-QSLELQSVAK-VSAFHGLTRPTISIQSYLERIFKYANCSP 75
           P+V+T +S +++++   N+  + + +   K + AFHG+  P+ISI  YLERI+KY  CSP
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSP 84

Query: 76  SCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFLDDLESS---VFRLGGVSL 135
           +CFVV YVY+DR   + P   + S NVHRLL+T V+++AK LDD+  +     R+GGVS 
Sbjct: 85  ACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSN 144

Query: 136 NSLVLLE 138
             L  +E
Sbjct: 145 ADLNKME 151

[Close]

BLAST of Spg002589 vs. TAIR 10
Match: AT2G45080.1 (cyclin p3;1 )

HSP 1 Score: 94.7 bits (234), Expect = 6.8e-20
Identity = 54/134 (40.30%), Postives = 82/134 (61.19%), Query Frame = 0


Query: 8   HQNQMVPIPKVITFLSSLLQRVSESNDQ-SLELQSVAKVSAFHGLTRPTISIQSYLERIF 67
           +Q+    +P VI+ LSSL++R    N++ S       K   F     P ++IQSYLERIF
Sbjct: 20  YQDDSNTVPLVISVLSSLIERTLARNERISRSYGGFGKTRVFDCREIPDMTIQSYLERIF 79

Query: 68  KYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFLDDL--ESSVF- 127
           +Y    PS +VVAYVY+DRF Q      I   NVHRLLIT++++++K+++D+  ++S F 
Sbjct: 80  RYTKAGPSVYVVAYVYIDRFCQNNQGFRISLTNVHRLLITTIMIASKYVEDMNYKNSYFA 139

Query: 128 RLGGVSLNSLVLLE 138
           ++GG+    L  LE
Sbjct: 140 KVGGLETEDLNNLE 153

The following BLAST results are available for this feature:

BLAST of Spg002589 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941693.1	5.9e-50	79.29	cyclin-U4-1-like [Cucurbita moschata]	[more]
XP_022992955.1	1.3e-49	79.29	cyclin-U4-1-like [Cucurbita maxima]	[more]
XP_023526236.1	1.7e-49	78.57	cyclin-U4-1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6600208.1	1.4e-48	77.14	Cyclin-U4-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030869.1 Cycli...	[more]
OMO94810.1	1.0e-41	71.76	hypothetical protein CCACVL1_05802 [Corchorus capsularis]	[more]

BLAST of Spg002589 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80513	2.2e-39	68.00	Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1	[more]
Q9LY16	1.3e-36	57.53	Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1	[more]
Q9FKF6	4.3e-35	55.78	Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1	[more]
Q7XC35	7.3e-35	58.46	Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1	[more]
Q9LJ45	4.1e-22	43.31	Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1	[more]

BLAST of Spg002589 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSU2	2.8e-50	79.29	Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111446976 PE=3 SV=1	[more]
A0A6J1JX61	6.3e-50	79.29	Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111489131 PE=3 SV=1	[more]
A0A1R3JJ39	4.9e-42	71.76	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_05802 PE=3 ...	[more]
A0A6J1AHH9	1.9e-41	74.60	Cyclin OS=Herrania umbratica OX=108875 GN=LOC110418289 PE=3 SV=1	[more]
A0A061G061	1.9e-41	75.40	Cyclin OS=Theobroma cacao OX=3641 GN=TCM_014820 PE=3 SV=1	[more]

BLAST of Spg002589 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44740.1	1.5e-40	68.00	cyclin p4;1	[more]
AT5G07450.1	9.4e-38	57.53	cyclin p4;3	[more]
AT5G61650.1	3.0e-36	55.78	CYCLIN P4;2	[more]
AT3G21870.1	2.9e-23	43.31	cyclin p2;1	[more]
AT2G45080.1	6.8e-20	40.30	cyclin p3;1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013922	Cyclin PHO80-like	PFAM	PF08613	Cyclin	coord: 27..137 e-value: 1.3E-24 score: 87.4
IPR012389	Cyclin P/U	PIRSF	PIRSF027110	PREG	coord: 1..143 e-value: 4.7E-49 score: 164.9
None	No IPR available	GENE3D	1.10.472.10		coord: 5..139 e-value: 1.6E-37 score: 131.1
None	No IPR available	PANTHER	PTHR15615:SF102	CYCLIN	coord: 10..137
None	No IPR available	PANTHER	PTHR15615	UNCHARACTERIZED	coord: 10..137
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 52..117 e-value: 0.00796857 score: 31.8253
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 60..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg002589.1	Spg002589.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component	GO:0005634	nucleus
molecular_function	GO:0018024	histone-lysine N-methyltransferase activity
molecular_function	GO:0019901	protein kinase binding
molecular_function	GO:0008270	zinc ion binding