Spg002427 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg002427
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	embryo-specific protein ATS3B-like
Location	scaffold6: 2028764 .. 2030655 (-)
RNA-Seq Expression	Spg002427
Synteny	Spg002427

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCACCCAATCACCAATCCGCCATAAATTTGATTCGAGCCAACGCCCTCGTTCAACGAAGCTCTCTGGTCCCGTTTCAGTGGAGCAAAACGAAAGCTCTGTAAAAATGGCGACGCCTCTGCTTCCGTTGTTCATCTTTTCCTTCATCACCATTTCCGCCGCCGAATCAACCGGTTCGCTGCCTCAAGCTGCTCCAAAATCCTTAACCATCGGCTATATTCAGGTTCCGATTATCATTTTCCCTCTCTCGTTTGTTCAATTTTTCTTTCATTCCTCAATCGACGTGCTTCTCTCTCTGAGTTTCTCTGTGAATGAAACTGACTCTATTGTCCTCTTCTTCTTTGGTATTTTCGGGTGAAGAAAGCGGGAGATTGCAATTACAGTGTTAATATAACGACAAGCTGCTTATCCCCTTTCCATATTAGTTCTGAAATCGGTGTTCTGTTTGGGGACGCTCATGGAAATCAGGTTCGTTTTTCCGAGATTTTGTTTTTAATTATTGTGCAATTATTTCATCTGTTGAAGGTTAGAGACTGTAGAGTGTAGAGAAGGAAATTAAAAGCAGCTTGATTAACAATCAAGCATCTAAGGCCAAACGTGAATCTATTTCTGAAGTTTCATTTAATATGGATGTTCTTATTATAAAAAACTCAAAAGGATGTTTTCCTGTTCTACTTTATGTTATGGTCAAGTTTTTAATATTCGAGTTTTGAATTGCAAGAAAAGAACAAATAACAGCTGTAGAACATGTAGACCTTCCTTTTCCTTTTTTGAAATCAAAGTTTTGAGGAAGAATTAGACTGTTTCCATTAAGATGCTTGAGAATTTCCATCAATTTATCTGTGATTCTTATTACACTTTTTTATATTTCATTGAATGGGATGAAAGTTGAGCTTTCACTTAAACTTAGAAGTAGAAGCTTACAATCAGTTTAAAGTATGTTTAATATTACATCTTAACCTATTATTTAGCACTGCACAATTACCTTTACATCTAACAATCACTCAAAATAGTTATGAAATTAAGAACAAGCTAGTAGTGCTGTGGTCTAAGTGTAATTTTGATCTCTAAACTTTTAAATGCTTTATTAGTCACCCAACTTAATAATTTAACCAGAACCTAAATACATTCATAAACTGGATATCTAATCTATTACATGGTGACTTTCAACCCTTTTACATGTGTATTAAATTATGATGGTTTATGTTTTCTTTTATTGAGTTATGATGCATAAATGGATGATTGATTTAGAATTTGAAAAGCAGATAGATGAGCCAAAGCTGGAAGTTGAAAGCAGCAATGCTTTTGCAAAATGCAGCAAAGACATTTTTGAACTGACAGGACCATGCATGGACCAGATATGTTTCTTCTATCTTTACAAAAACGGCTCAGACGATTGGATTCCAGAGACTGTAGAAATTTCCAGCCCTGATATTGACTCTGTTAAATACAAATACAATGCCTCAATCCCAAGTGACACATGGTATGGCTTTGACGACTGTGAATACTTTCCGCCATCGCCGCCGCCGCCTCCTCCTCCTCCGCCGGCCCCCTCTGCAGCCGGCCGTCTGACCAGGTGGAAATGGCTTGCTTATGTGATTCCTGTGCTTCTCTGCGGCGCTGTGCTGTGAATGTGATTCTGCATCTCGGCCTTGGTGGGTTAGATTTCTTTTAATTTTTGATCCACCCTATTGTCTGTATTTGTACTGTGGTTTTGAATCTTTTGATGATCGTATCAAGAACTTGTCTATCTGAAATATGTCTGTCAGTTCAACTTTGATATGTAGAATAGGATTTGATGGAGTTGTGTTACGGTTCTATTACCTTTTCTTTCTTGAATTTGGGAGTAAAATTTCTGAAGTTGAACCACGCATTAAAGAAAAATCAAAATCTC

mRNA sequence

ATGGCGACGCCTCTGCTTCCGTTGTTCATCTTTTCCTTCATCACCATTTCCGCCGCCGAATCAACCGGTTCGCTGCCTCAAGCTGCTCCAAAATCCTTAACCATCGGCTATATTCAGAAAGCGGGAGATTGCAATTACAGTGTTAATATAACGACAAGCTGCTTATCCCCTTTCCATATTAGTTCTGAAATCGGTGTTCTGTTTGGGGACGCTCATGGAAATCAGATAGATGAGCCAAAGCTGGAAGTTGAAAGCAGCAATGCTTTTGCAAAATGCAGCAAAGACATTTTTGAACTGACAGGACCATGCATGGACCAGATATGTTTCTTCTATCTTTACAAAAACGGCTCAGACGATTGGATTCCAGAGACTGTAGAAATTTCCAGCCCTGATATTGACTCTGTTAAATACAAATACAATGCCTCAATCCCAAGTGACACATGGTATGGCTTTGACGACTGTGAATACTTTCCGCCATCGCCGCCGCCGCCTCCTCCTCCTCCGCCGGCCCCCTCTGCAGCCGGCCGTCTGACCAGGTGGAAATGGCTTGCTTATGTGATTCCTGTGCTTCTCTGCGGCGCTGTGCTGTGA

Coding sequence (CDS)

ATGGCGACGCCTCTGCTTCCGTTGTTCATCTTTTCCTTCATCACCATTTCCGCCGCCGAATCAACCGGTTCGCTGCCTCAAGCTGCTCCAAAATCCTTAACCATCGGCTATATTCAGAAAGCGGGAGATTGCAATTACAGTGTTAATATAACGACAAGCTGCTTATCCCCTTTCCATATTAGTTCTGAAATCGGTGTTCTGTTTGGGGACGCTCATGGAAATCAGATAGATGAGCCAAAGCTGGAAGTTGAAAGCAGCAATGCTTTTGCAAAATGCAGCAAAGACATTTTTGAACTGACAGGACCATGCATGGACCAGATATGTTTCTTCTATCTTTACAAAAACGGCTCAGACGATTGGATTCCAGAGACTGTAGAAATTTCCAGCCCTGATATTGACTCTGTTAAATACAAATACAATGCCTCAATCCCAAGTGACACATGGTATGGCTTTGACGACTGTGAATACTTTCCGCCATCGCCGCCGCCGCCTCCTCCTCCTCCGCCGGCCCCCTCTGCAGCCGGCCGTCTGACCAGGTGGAAATGGCTTGCTTATGTGATTCCTGTGCTTCTCTGCGGCGCTGTGCTGTGA

Protein sequence

MATPLLPLFIFSFITISAAESTGSLPQAAPKSLTIGYIQKAGDCNYSVNITTSCLSPFHISSEIGVLFGDAHGNQIDEPKLEVESSNAFAKCSKDIFELTGPCMDQICFFYLYKNGSDDWIPETVEISSPDIDSVKYKYNASIPSDTWYGFDDCEYFPPSPPPPPPPPPAPSAAGRLTRWKWLAYVIPVLLCGAVL

Homology

[Close]

BLAST of Spg002427 vs. NCBI nr
Match: XP_022923162.1 (embryo-specific protein ATS3B-like [Cucurbita moschata])

HSP 1 Score: 339.3 bits (869), Expect = 2.1e-89
Identity = 166/196 (84.69%), Postives = 174/196 (88.78%), Query Frame = 0


Query: 1   MATPLLPLFIFSFITISAAESTGSLPQAAPKSLTIGYIQKAGDCNYSVNITTSCLSPFHI 60
           MA  LL  FIF+F +ISAA STGSLPQ APKSLTIGYIQKAGDCNY VNITTSC SPFHI
Sbjct: 1   MAMSLLSFFIFTFFSISAAVSTGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSPFHI 60

Query: 61  SSEIGVLFGDAHGNQIDEPKLEVESSNAFAKCSKDIFELTGPCMDQICFFYLYKNGSDDW 120
           ++EIGVLFGDAHGNQI EPKLEVESS AFAKCSKDIFELTGPC DQICFFYLYKNGSDDW
Sbjct: 61  TAEIGVLFGDAHGNQIYEPKLEVESSKAFAKCSKDIFELTGPCTDQICFFYLYKNGSDDW 120

Query: 121 IPETVEISSPDIDSVKYKYNASIPSDTWYGFDDCEYFPPSPPPPPPPPPAPSAAGRLTRW 180
           IPETVEISSPDID+VKYKYN+SIP DTWYGFDDC+YF P PPPPPP PPAPS AG L R 
Sbjct: 121 IPETVEISSPDIDTVKYKYNSSIPDDTWYGFDDCQYFTP-PPPPPPSPPAPSTAGHLRRL 180

Query: 181 KWLAYVIPVLLCGAVL 197
           KWLA+VIPVLL  AVL
Sbjct: 181 KWLAFVIPVLLSSAVL 195

[Close]

BLAST of Spg002427 vs. NCBI nr
Match: XP_038877430.1 (embryo-specific protein ATS3B-like [Benincasa hispida])

HSP 1 Score: 336.3 bits (861), Expect = 1.8e-88
Identity = 164/197 (83.25%), Postives = 176/197 (89.34%), Query Frame = 0


Query: 1   MATPLLPLFIFSFITI-SAAESTGSLPQAAPKSLTIGYIQKAGDCNYSVNITTSCLSPFH 60
           MATPLLP FIFSF +I SAA+STGSLPQ APKSL+IGYIQKAGDCNY VNITTSC SPFH
Sbjct: 5   MATPLLPFFIFSFFSISSAAQSTGSLPQTAPKSLSIGYIQKAGDCNYRVNITTSCSSPFH 64

Query: 61  ISSEIGVLFGDAHGNQIDEPKLEVESSNAFAKCSKDIFELTGPCMDQICFFYLYKNGSDD 120
           IS+EIGVLFGDAHGNQI EPKLEVES NAFAKCSKDIFEL GPC DQICFFYLYK+GSD+
Sbjct: 65  ISAEIGVLFGDAHGNQIYEPKLEVESKNAFAKCSKDIFELIGPCTDQICFFYLYKSGSDN 124

Query: 121 WIPETVEISSPDIDSVKYKYNASIPSDTWYGFDDCEYFPPSPPPPPPPPPAPSAAGRLTR 180
           WIPETVEISSPDID+ KYKYN+SIP+DTWYGFDDC+YFP   P PPPPPP PSAA R+ R
Sbjct: 125 WIPETVEISSPDIDTAKYKYNSSIPNDTWYGFDDCQYFP--SPSPPPPPPVPSAACRVPR 184

Query: 181 WKWLAYVIPVLLCGAVL 197
           WKWLA VIP+LL  AVL
Sbjct: 185 WKWLASVIPLLLSSAVL 199

[Close]

BLAST of Spg002427 vs. NCBI nr
Match: KAG6576766.1 (Embryo-specific protein ATS3B, partial [Cucurbita argyrosperma subsp. sororia] >KAG6576772.1 Embryo-specific protein ATS3B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 334.0 bits (855), Expect = 9.0e-88
Identity = 164/196 (83.67%), Postives = 172/196 (87.76%), Query Frame = 0


Query: 1   MATPLLPLFIFSFITISAAESTGSLPQAAPKSLTIGYIQKAGDCNYSVNITTSCLSPFHI 60
           MA  LL  FIF+F + SAA STGSLPQ APKSLTIGYIQKAGDCNY VNITTSC SPFHI
Sbjct: 1   MAMSLLSFFIFTFFSFSAAVSTGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSPFHI 60

Query: 61  SSEIGVLFGDAHGNQIDEPKLEVESSNAFAKCSKDIFELTGPCMDQICFFYLYKNGSDDW 120
           ++EIGVLFGDAHGNQI E KLEVESS AFAKCSKDIFELTGPC DQICFFYLYKNGSDDW
Sbjct: 61  TAEIGVLFGDAHGNQIYERKLEVESSKAFAKCSKDIFELTGPCTDQICFFYLYKNGSDDW 120

Query: 121 IPETVEISSPDIDSVKYKYNASIPSDTWYGFDDCEYFPPSPPPPPPPPPAPSAAGRLTRW 180
           IPETVEISSPDID+VKYKYN+SIP DTWYGFDDC+YF  SPPPPPP PPAPS AG L R 
Sbjct: 121 IPETVEISSPDIDTVKYKYNSSIPDDTWYGFDDCQYF-TSPPPPPPSPPAPSTAGHLRRL 180

Query: 181 KWLAYVIPVLLCGAVL 197
           KWLA+VIPVLL  AVL
Sbjct: 181 KWLAFVIPVLLSSAVL 195

[Close]

BLAST of Spg002427 vs. NCBI nr
Match: XP_023552619.1 (embryo-specific protein ATS3B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.1 bits (845), Expect = 1.3e-86
Identity = 164/196 (83.67%), Postives = 172/196 (87.76%), Query Frame = 0


Query: 1   MATPLLPLFIFSFITISAAESTGSLPQAAPKSLTIGYIQKAGDCNYSVNITTSCLSPFHI 60
           MA  LL  FIF+F +ISAA S+GSLPQ APKSLTIGYIQKAGDCNY VNITTSC SPFHI
Sbjct: 1   MAMSLLSFFIFTFFSISAAVSSGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSPFHI 60

Query: 61  SSEIGVLFGDAHGNQIDEPKLEVESSNAFAKCSKDIFELTGPCMDQICFFYLYKNGSDDW 120
           ++EIGVLFGDAHGNQI EPKLEVESS AFAKCSKDIFELTGPC DQICFFYLYKNGSDDW
Sbjct: 61  TAEIGVLFGDAHGNQIYEPKLEVESSKAFAKCSKDIFELTGPCTDQICFFYLYKNGSDDW 120

Query: 121 IPETVEISSPDIDSVKYKYNASIPSDTWYGFDDCEYFPPSPPPPPPPPPAPSAAGRLTRW 180
           IPETVEISSPDID+VKYKYN+SIP DTW GFDDC+YF  SPPPPPP PPAPS AG L R 
Sbjct: 121 IPETVEISSPDIDTVKYKYNSSIPDDTWDGFDDCQYF-TSPPPPPPSPPAPSTAGHLRRL 180

Query: 181 KWLAYVIPVLLCGAVL 197
           K LAYVIPVLL  AVL
Sbjct: 181 KGLAYVIPVLLSSAVL 195

[Close]

BLAST of Spg002427 vs. NCBI nr
Match: XP_022984445.1 (embryo-specific protein ATS3B-like [Cucurbita maxima])

HSP 1 Score: 329.7 bits (844), Expect = 1.7e-86
Identity = 162/196 (82.65%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 1   MATPLLPLFIFSFITISAAESTGSLPQAAPKSLTIGYIQKAGDCNYSVNITTSCLSPFHI 60
           M  P L  FIF F +ISAA S+GSLPQ APKSLTIGYIQKAGDCNY VNITTSC SPFHI
Sbjct: 1   MVMPPLSFFIFFFFSISAAVSSGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSPFHI 60

Query: 61  SSEIGVLFGDAHGNQIDEPKLEVESSNAFAKCSKDIFELTGPCMDQICFFYLYKNGSDDW 120
           ++EIGVLFGDAHGNQI EPKLEVESS A AKCSKDIFELTGPC DQICFFYLYK GSDDW
Sbjct: 61  TAEIGVLFGDAHGNQIYEPKLEVESSKALAKCSKDIFELTGPCTDQICFFYLYKKGSDDW 120

Query: 121 IPETVEISSPDIDSVKYKYNASIPSDTWYGFDDCEYFPPSPPPPPPPPPAPSAAGRLTRW 180
           IPETVEISSPDID+VKYKYN+SIP DTWYGFDDC+YF  SPPPPPP PPAPS AG   R 
Sbjct: 121 IPETVEISSPDIDTVKYKYNSSIPEDTWYGFDDCQYF-TSPPPPPPSPPAPSTAGHQRRL 180

Query: 181 KWLAYVIPVLLCGAVL 197
           KWLAYVIPVLL  AVL
Sbjct: 181 KWLAYVIPVLLSSAVL 195

[Close]

BLAST of Spg002427 vs. ExPASy Swiss-Prot
Match: Q6NPM5 (Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 8.9e-30
Identity = 64/147 (43.54%), Postives = 88/147 (59.86%), Query Frame = 0


Query: 9   FIFSFITISAAESTGSLPQAAPKSLTIGYIQKAGD-CNYSVNITTSCLSPFHISSEIGVL 68
           F+F  I+ S  ES    P    +S  +  IQK G+ C Y+V I+TSC S  +   +I V 
Sbjct: 13  FVF-IISTSVYESKVLDPPHVAESFNVSLIQKLGNTCAYTVIISTSCSSTRYTRDQISVA 72

Query: 69  FGDAHGNQIDEPKLEVESSNAFAKCSKDIFELTGPCMDQICFFYLYKNGSDDWIPETVEI 128
           FGD +GNQI  P+L+  S+  F +CS D F++ GPC  QIC+ YLY++G D WIP TV+I
Sbjct: 73  FGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDGWIPNTVKI 132

Query: 129 SSPDIDSVKYKYNASIPSDTWYGFDDC 155
            S    +V + YN  +P   WYGF+ C
Sbjct: 133 YSHGSKAVTFPYNTYVPESVWYGFNYC 158

[Close]

BLAST of Spg002427 vs. ExPASy Swiss-Prot
Match: Q9LYP6 (Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.9e-28
Identity = 71/178 (39.89%), Postives = 99/178 (55.62%), Query Frame = 0


Query: 42  GDCNYSVNITTSCLSPFHISSEIGVLFGDAHGNQIDEPKLE--VESSNAFAKCSKDIFEL 101
           G C Y+V + TSCLSP     +I ++FGDA GN++  PKL   V       KCS + F++
Sbjct: 32  GTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQV 91

Query: 102 TGPCM-DQICFFYLYKNGSDDWIPETVEISSPDIDSVKYKYNASIPS-DTWYGFDDCE-- 161
            G C+ D IC  Y+ +NG D W+PE++EI S    SVK+ ++ S+P  +TWYG ++C   
Sbjct: 92  RGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNCNTT 151

Query: 162 -----------YFPPSPPP-----PPPPPPAPSAAGRLTRWK--WLAYVIPVLLCGAV 196
                      +FPP  PP     PPPPPP PSAA RL   +  +LA+ I   +   V
Sbjct: 152 GRPSSPDLPPPHFPPEFPPETPTTPPPPPPRPSAASRLGNGESVFLAFAIATAIAAMV 209

[Close]

BLAST of Spg002427 vs. ExPASy Swiss-Prot
Match: Q681K2 (Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 9.2e-27
Identity = 59/153 (38.56%), Postives = 88/153 (57.52%), Query Frame = 0


Query: 6   LPLFIF---SFITISAAES-TGSLPQAAPKSLTIGYIQKAGDCNYSVNITTSCLSPFHIS 65
           +PLF+F   SF   S+A S   + P      +    ++ A  C+Y+V I TSC S  +  
Sbjct: 6   IPLFLFALCSFTLFSSARSFITTKPLPIDSFIPKPKLENAAACSYTVIIKTSCSSVSYTR 65

Query: 66  SEIGVLFGDAHGNQIDEPKLEVESSNAFAKCSKDIFELTGPCMDQICFFYLYKNGSDDWI 125
            +I + FGD +GN++   +L+  SS  F KCS D ++++GPCM  +C+ YL + GSD W 
Sbjct: 66  DKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWK 125

Query: 126 PETVEISSPDIDSVKYKYNASIPSDTWYGFDDC 155
           PE V+I    I SV + YN  +P+  WYGF+ C
Sbjct: 126 PENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVC 158

[Close]

BLAST of Spg002427 vs. ExPASy TrEMBL
Match: A0A6J1E5E8 (embryo-specific protein ATS3B-like OS=Cucurbita moschata OX=3662 GN=LOC111430910 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.0e-89
Identity = 166/196 (84.69%), Postives = 174/196 (88.78%), Query Frame = 0


Query: 1   MATPLLPLFIFSFITISAAESTGSLPQAAPKSLTIGYIQKAGDCNYSVNITTSCLSPFHI 60
           MA  LL  FIF+F +ISAA STGSLPQ APKSLTIGYIQKAGDCNY VNITTSC SPFHI
Sbjct: 1   MAMSLLSFFIFTFFSISAAVSTGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSPFHI 60

Query: 61  SSEIGVLFGDAHGNQIDEPKLEVESSNAFAKCSKDIFELTGPCMDQICFFYLYKNGSDDW 120
           ++EIGVLFGDAHGNQI EPKLEVESS AFAKCSKDIFELTGPC DQICFFYLYKNGSDDW
Sbjct: 61  TAEIGVLFGDAHGNQIYEPKLEVESSKAFAKCSKDIFELTGPCTDQICFFYLYKNGSDDW 120

Query: 121 IPETVEISSPDIDSVKYKYNASIPSDTWYGFDDCEYFPPSPPPPPPPPPAPSAAGRLTRW 180
           IPETVEISSPDID+VKYKYN+SIP DTWYGFDDC+YF P PPPPPP PPAPS AG L R 
Sbjct: 121 IPETVEISSPDIDTVKYKYNSSIPDDTWYGFDDCQYFTP-PPPPPPSPPAPSTAGHLRRL 180

Query: 181 KWLAYVIPVLLCGAVL 197
           KWLA+VIPVLL  AVL
Sbjct: 181 KWLAFVIPVLLSSAVL 195

[Close]

BLAST of Spg002427 vs. ExPASy TrEMBL
Match: A0A6J1J8M6 (embryo-specific protein ATS3B-like OS=Cucurbita maxima OX=3661 GN=LOC111482747 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 8.2e-87
Identity = 162/196 (82.65%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 1   MATPLLPLFIFSFITISAAESTGSLPQAAPKSLTIGYIQKAGDCNYSVNITTSCLSPFHI 60
           M  P L  FIF F +ISAA S+GSLPQ APKSLTIGYIQKAGDCNY VNITTSC SPFHI
Sbjct: 1   MVMPPLSFFIFFFFSISAAVSSGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSPFHI 60

Query: 61  SSEIGVLFGDAHGNQIDEPKLEVESSNAFAKCSKDIFELTGPCMDQICFFYLYKNGSDDW 120
           ++EIGVLFGDAHGNQI EPKLEVESS A AKCSKDIFELTGPC DQICFFYLYK GSDDW
Sbjct: 61  TAEIGVLFGDAHGNQIYEPKLEVESSKALAKCSKDIFELTGPCTDQICFFYLYKKGSDDW 120

Query: 121 IPETVEISSPDIDSVKYKYNASIPSDTWYGFDDCEYFPPSPPPPPPPPPAPSAAGRLTRW 180
           IPETVEISSPDID+VKYKYN+SIP DTWYGFDDC+YF  SPPPPPP PPAPS AG   R 
Sbjct: 121 IPETVEISSPDIDTVKYKYNSSIPEDTWYGFDDCQYF-TSPPPPPPSPPAPSTAGHQRRL 180

Query: 181 KWLAYVIPVLLCGAVL 197
           KWLAYVIPVLL  AVL
Sbjct: 181 KWLAYVIPVLLSSAVL 195

[Close]

BLAST of Spg002427 vs. ExPASy TrEMBL
Match: A0A1S3AXL4 (uncharacterized protein LOC103484014 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484014 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.5e-85
Identity = 155/196 (79.08%), Postives = 168/196 (85.71%), Query Frame = 0


Query: 1   MATPLLPLFIFSFITISAAESTGSLPQAAPKSLTIGYIQKAGDCNYSVNITTSCLSPFHI 60
           MATPLLP FIFS  +ISA++STGSLPQ A KSL+I YI++AGDCNY VNITTSC SPF+I
Sbjct: 10  MATPLLPFFIFSLFSISASQSTGSLPQPASKSLSIAYIREAGDCNYRVNITTSCSSPFYI 69

Query: 61  SSEIGVLFGDAHGNQIDEPKLEVESSNAFAKCSKDIFELTGPCMDQICFFYLYKNGSDDW 120
           SSEIGVLFGDAHGNQI EPKLEVES NAF KC KDIFEL GPC DQICFFYLYKNGSDDW
Sbjct: 70  SSEIGVLFGDAHGNQIYEPKLEVESGNAFGKCRKDIFELIGPCTDQICFFYLYKNGSDDW 129

Query: 121 IPETVEISSPDIDSVKYKYNASIPSDTWYGFDDCEYFPPSPPPPPPPPPAPSAAGRLTRW 180
           IPETVEISSPDID+VKY YN+SIP+DTWYGFDDC+YFP   PPPPPPP  PS AG L RW
Sbjct: 130 IPETVEISSPDIDTVKYTYNSSIPNDTWYGFDDCQYFPSPSPPPPPPPSVPSTAGCLPRW 189

Query: 181 KWLAYVIPVLLCGAVL 197
           KWLA +IPVL    +L
Sbjct: 190 KWLASLIPVLFSSFLL 205

[Close]

BLAST of Spg002427 vs. ExPASy TrEMBL
Match: A0A6J1CJM9 (embryo-specific protein ATS3B-like OS=Momordica charantia OX=3673 GN=LOC111011611 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.5e-80
Identity = 149/189 (78.84%), Postives = 164/189 (86.77%), Query Frame = 0


Query: 1   MATPLLPLFIFSFITISAAESTGSLPQAAPKSLTIGYIQKAGDCNYSVNITTSCLSPFHI 60
           MAT LLP  +F+F  ISAAEST SLPQAAPKSLTI YIQ+ GDCNY VNITTSC SPF+ 
Sbjct: 18  MAT-LLPFLVFTFFAISAAESTASLPQAAPKSLTIAYIQQEGDCNYRVNITTSCSSPFYN 77

Query: 61  SSEIGVLFGDAHGNQIDEPKLEVESSNAFAKCSKDIFELTGPCMDQICFFYLYKNGSDDW 120
           S+EIGVLFGDAHGNQI EPKLEVES NAF KCSKDIFE+ GPC+DQICFFYLYKNGSDDW
Sbjct: 78  SAEIGVLFGDAHGNQIYEPKLEVESKNAFGKCSKDIFEVVGPCVDQICFFYLYKNGSDDW 137

Query: 121 IPETVEISSPDIDSVKYKYNASIPSDTWYGFDDCEYFPPSPPPPPPPPPAPSAAG-RL-T 180
           IPETV+IS  DI++V+YKYN+SIP +TWYGFDDC+YFPP  PPPPPPPPAPSAAG RL  
Sbjct: 138 IPETVQISGSDINTVEYKYNSSIPRETWYGFDDCDYFPPPSPPPPPPPPAPSAAGPRLPA 197

Query: 181 RWKWLAYVI 188
            W+WLAY I
Sbjct: 198 TWRWLAYAI 205

[Close]

BLAST of Spg002427 vs. ExPASy TrEMBL
Match: A0A0A0L8G7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G177970 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.7e-79
Identity = 146/190 (76.84%), Postives = 161/190 (84.74%), Query Frame = 0


Query: 1   MATPLLPLFIFSFITISAAESTGSLPQAAPKSLTIGYIQKAGDCNYSVNITTSCLSPFHI 60
           MATPLLP F FSF +ISAA+ST S      KSL+I YI++AGDCNY VNITTSC SPF+I
Sbjct: 10  MATPLLPFFFFSFFSISAAQSTAS------KSLSIAYIREAGDCNYRVNITTSCSSPFYI 69

Query: 61  SSEIGVLFGDAHGNQIDEPKLEVESSNAFAKCSKDIFELTGPCMDQICFFYLYKNGSDDW 120
           SSEIGVLFGDA GNQI EPKLEVES NAF KC KDIFEL GPC+DQICFFYLYKNGSD+W
Sbjct: 70  SSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGSDNW 129

Query: 121 IPETVEISSPDIDSVKYKYNASIPSDTWYGFDDCEYFPPSPPPPPPPPPAPSAAGRLTRW 180
           IPETVEISSPDID+VKY YN+SIP+DTWYGF+DC+YFP   PPPPPPP  PS AG L RW
Sbjct: 130 IPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGSLPRW 189

Query: 181 KWLAYVIPVL 191
           KW+A +IPVL
Sbjct: 190 KWIASLIPVL 193

[Close]

BLAST of Spg002427 vs. TAIR 10
Match: AT5G62200.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 131.7 bits (330), Expect = 6.3e-31
Identity = 64/147 (43.54%), Postives = 88/147 (59.86%), Query Frame = 0


Query: 9   FIFSFITISAAESTGSLPQAAPKSLTIGYIQKAGD-CNYSVNITTSCLSPFHISSEIGVL 68
           F+F  I+ S  ES    P    +S  +  IQK G+ C Y+V I+TSC S  +   +I V 
Sbjct: 13  FVF-IISTSVYESKVLDPPHVAESFNVSLIQKLGNTCAYTVIISTSCSSTRYTRDQISVA 72

Query: 69  FGDAHGNQIDEPKLEVESSNAFAKCSKDIFELTGPCMDQICFFYLYKNGSDDWIPETVEI 128
           FGD +GNQI  P+L+  S+  F +CS D F++ GPC  QIC+ YLY++G D WIP TV+I
Sbjct: 73  FGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDGWIPNTVKI 132

Query: 129 SSPDIDSVKYKYNASIPSDTWYGFDDC 155
            S    +V + YN  +P   WYGF+ C
Sbjct: 133 YSHGSKAVTFPYNTYVPESVWYGFNYC 158

[Close]

BLAST of Spg002427 vs. TAIR 10
Match: AT5G07190.1 (seed gene 3 )

HSP 1 Score: 125.9 bits (315), Expect = 3.5e-29
Identity = 71/178 (39.89%), Postives = 99/178 (55.62%), Query Frame = 0


Query: 42  GDCNYSVNITTSCLSPFHISSEIGVLFGDAHGNQIDEPKLE--VESSNAFAKCSKDIFEL 101
           G C Y+V + TSCLSP     +I ++FGDA GN++  PKL   V       KCS + F++
Sbjct: 32  GTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQV 91

Query: 102 TGPCM-DQICFFYLYKNGSDDWIPETVEISSPDIDSVKYKYNASIPS-DTWYGFDDCE-- 161
            G C+ D IC  Y+ +NG D W+PE++EI S    SVK+ ++ S+P  +TWYG ++C   
Sbjct: 92  RGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNCNTT 151

Query: 162 -----------YFPPSPPP-----PPPPPPAPSAAGRLTRWK--WLAYVIPVLLCGAV 196
                      +FPP  PP     PPPPPP PSAA RL   +  +LA+ I   +   V
Sbjct: 152 GRPSSPDLPPPHFPPEFPPETPTTPPPPPPRPSAASRLGNGESVFLAFAIATAIAAMV 209

[Close]

BLAST of Spg002427 vs. TAIR 10
Match: AT5G07190.2 (seed gene 3 )

HSP 1 Score: 125.9 bits (315), Expect = 3.5e-29
Identity = 71/178 (39.89%), Postives = 99/178 (55.62%), Query Frame = 0


Query: 42  GDCNYSVNITTSCLSPFHISSEIGVLFGDAHGNQIDEPKLE--VESSNAFAKCSKDIFEL 101
           G C Y+V + TSCLSP     +I ++FGDA GN++  PKL   V       KCS + F++
Sbjct: 4   GTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQV 63

Query: 102 TGPCM-DQICFFYLYKNGSDDWIPETVEISSPDIDSVKYKYNASIPS-DTWYGFDDCE-- 161
            G C+ D IC  Y+ +NG D W+PE++EI S    SVK+ ++ S+P  +TWYG ++C   
Sbjct: 64  RGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNCNTT 123

Query: 162 -----------YFPPSPPP-----PPPPPPAPSAAGRLTRWK--WLAYVIPVLLCGAV 196
                      +FPP  PP     PPPPPP PSAA RL   +  +LA+ I   +   V
Sbjct: 124 GRPSSPDLPPPHFPPEFPPETPTTPPPPPPRPSAASRLGNGESVFLAFAIATAIAAMV 181

[Close]

BLAST of Spg002427 vs. TAIR 10
Match: AT5G62210.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 123.2 bits (308), Expect = 2.2e-28
Identity = 63/159 (39.62%), Postives = 86/159 (54.09%), Query Frame = 0


Query: 44  CNYSVNITTSCLSPFHISSEIGVLFGDAHGNQIDEPKLE--VESSNAFAKCSKDIFELTG 103
           C Y+V +TTSC SP     ++ +  GDA  NQ+  P+L+  +     F KCS D F++ G
Sbjct: 40  CPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSDTFQVKG 99

Query: 104 PCMDQICFFYLYKNGSDDWIPETVEISSPDIDSVKYKYNASIPSDTWYGFDDCE------ 163
            C++ IC  Y+Y++G+D WIPETVEI      SVK+ +N ++P + WYG + C       
Sbjct: 100 KCLNTICSVYIYRSGTDGWIPETVEIYKEGSKSVKFDFNKNVPENIWYGNNYCNNTDLPP 159

Query: 164 ------------------YFPPSPP--PPPPPPPAPSAA 175
                             YFPP PP  PPPPPP  PSAA
Sbjct: 160 PSPDFPPFSPSIPPPSPPYFPPEPPSIPPPPPPSPPSAA 198

[Close]

BLAST of Spg002427 vs. TAIR 10
Match: AT2G41475.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 121.7 bits (304), Expect = 6.5e-28
Identity = 59/153 (38.56%), Postives = 88/153 (57.52%), Query Frame = 0


Query: 6   LPLFIF---SFITISAAES-TGSLPQAAPKSLTIGYIQKAGDCNYSVNITTSCLSPFHIS 65
           +PLF+F   SF   S+A S   + P      +    ++ A  C+Y+V I TSC S  +  
Sbjct: 6   IPLFLFALCSFTLFSSARSFITTKPLPIDSFIPKPKLENAAACSYTVIIKTSCSSVSYTR 65

Query: 66  SEIGVLFGDAHGNQIDEPKLEVESSNAFAKCSKDIFELTGPCMDQICFFYLYKNGSDDWI 125
            +I + FGD +GN++   +L+  SS  F KCS D ++++GPCM  +C+ YL + GSD W 
Sbjct: 66  DKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWK 125

Query: 126 PETVEISSPDIDSVKYKYNASIPSDTWYGFDDC 155
           PE V+I    I SV + YN  +P+  WYGF+ C
Sbjct: 126 PENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVC 158

The following BLAST results are available for this feature:

BLAST of Spg002427 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923162.1	2.1e-89	84.69	embryo-specific protein ATS3B-like [Cucurbita moschata]	[more]
XP_038877430.1	1.8e-88	83.25	embryo-specific protein ATS3B-like [Benincasa hispida]	[more]
KAG6576766.1	9.0e-88	83.67	Embryo-specific protein ATS3B, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
XP_023552619.1	1.3e-86	83.67	embryo-specific protein ATS3B-like [Cucurbita pepo subsp. pepo]	[more]
XP_022984445.1	1.7e-86	82.65	embryo-specific protein ATS3B-like [Cucurbita maxima]	[more]

BLAST of Spg002427 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NPM5	8.9e-30	43.54	Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1	[more]
Q9LYP6	4.9e-28	39.89	Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1	[more]
Q681K2	9.2e-27	38.56	Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1	[more]

BLAST of Spg002427 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5E8	1.0e-89	84.69	embryo-specific protein ATS3B-like OS=Cucurbita moschata OX=3662 GN=LOC111430910...	[more]
A0A6J1J8M6	8.2e-87	82.65	embryo-specific protein ATS3B-like OS=Cucurbita maxima OX=3661 GN=LOC111482747 P...	[more]
A0A1S3AXL4	1.5e-85	79.08	uncharacterized protein LOC103484014 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1CJM9	1.5e-80	78.84	embryo-specific protein ATS3B-like OS=Momordica charantia OX=3673 GN=LOC11101161...	[more]
A0A0A0L8G7	1.7e-79	76.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G177970 PE=4 SV=1	[more]

BLAST of Spg002427 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62200.1	6.3e-31	43.54	Embryo-specific protein 3, (ATS3)	[more]
AT5G07190.1	3.5e-29	39.89	seed gene 3	[more]
AT5G07190.2	3.5e-29	39.89	seed gene 3	[more]
AT5G62210.1	2.2e-28	39.62	Embryo-specific protein 3, (ATS3)	[more]
AT2G41475.1	6.5e-28	38.56	Embryo-specific protein 3, (ATS3)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010417	Embryo-specific ATS3	PFAM	PF06232	ATS3	coord: 39..154 e-value: 4.9E-38 score: 129.8
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 8..191
None	No IPR available	PANTHER	PTHR31718:SF32	EMBRYO-SPECIFIC PROTEIN ATS3B	coord: 8..191
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 43..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg002427.1	Spg002427.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding