Spg002415 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg002415
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold6: 4655683 .. 4656189 (+)
RNA-Seq Expression	Spg002415
Synteny	Spg002415

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCTCAATTATGGAGGGTCCATTCTTGAAGTATTGAACGTGAAAAAGAAGACTTACTTGGCCCAAACGGCAAGCAGAAGCCCTAGACGGCGGCACAAGAAACCAAATCGGGAACCAGACGGCGGCATATTTCGATCGGAGAGAAATGGAGAAGGCCCTGAGAATATACGGCGAAGTTCTGCGGCTAGTGAGACGGTTGCCGAAGGACACGAGGCCTTACTACGCCAAATACGCTCGAGAGAATTTTGTCAACTACAGAGAAGTCGATGCGAACGATGCCAAATCCCTAGAAGAACTCTTCCACAGAGCTTACAATCACTCCGTTTGGGTTCTCAACAAGGTTACACTCTGATCCTTTTAATCTTTCAGTTTCGAAATCGTTTCTCTGTCTATTCGCGTTATTCGATTGCATCGATCCGATCCGTTTTGAGTGGTTCTGGTGATTGGCAGTATTCGGTGGATGGATCCGCGGCGGATAAACTGAGGGAGATCTGTTATAGTTAG

mRNA sequence

ATGGGCCTCAATTATGGAGGGTCCATTCTTGAAGTATTGAACGTGAAAAAGAAGACTTACTTGGCCCAAACGGCAAGCAGAAGCCCTAGACGGCGGCACAAGAAACCAAATCGGGAACCAGACGGCGGCATATTTCGATCGGAGAGAAATGGAGAAGGCCCTGAGAATATACGGCGAAGTTCTGCGGCTAGTGAGACGGTTGCCGAAGGACACGAGGCCTTACTACGCCAAATACGCTCGAGAGAATTTTGTCAACTACAGAGAAGTCGATGCGAACGATGCCAAATCCCTAGAAGAACTCTTCCACAGAGCTTACAATCACTCCGTTTGGGTTCTCAACAAGGTTACACTCTGATCCTTTTAATCTTTCAGTTTCGAAATCGTTTCTCTGTCTATTCGCGTTATTCGATTGCATCGATCCGATCCGTTTTGAGTGGTTCTGGTGATTGGCAGTATTCGGTGGATGGATCCGCGGCGGATAAACTGAGGGAGATCTGTTATAGTTAG

Coding sequence (CDS)

ATGGGCCTCAATTATGGAGGGTCCATTCTTGAAGTATTGAACGTGAAAAAGAAGACTTACTTGGCCCAAACGGCAAGCAGAAGCCCTAGACGGCGGCACAAGAAACCAAATCGGGAACCAGACGGCGGCATATTTCGATCGGAGAGAAATGGAGAAGGCCCTGAGAATATACGGCGAAGTTCTGCGGCTAGTGAGACGGTTGCCGAAGGACACGAGGCCTTACTACGCCAAATACGCTCGAGAGAATTTTGTCAACTACAGAGAAGTCGATGCGAACGATGCCAAATCCCTAGAAGAACTCTTCCACAGAGCTTACAATCACTCCGTTTGGGTTCTCAACAAGGTTACACTCTGATCCTTTTAATCTTTCAGTTTCGAAATCGTTTCTCTGTCTATTCGCGTTATTCGATTGCATCGATCCGATCCGTTTTGAGTGGTTCTGGTGATTGGCAGTATTCGGTGGATGGATCCGCGGCGGATAAACTGAGGGAGATCTGTTATAGTTAG

Protein sequence

MGLNYGGSILEVLNVKKKTYLAQTASRSPRRRHKKPNREPDGGIFRSERNGEGPENIRRSSAASETVAEGHEALLRQIRSREFCQLQRSRCERCQIPRRTLPQSLQSLRLGSQQGYTLILLIFQFRNRFSVYSRYSIASIRSVLSGSGDWQYSVDGSAADKLREICYS

Homology

The following BLAST results are available for this feature:

BLAST of Spg002415 vs.


Match Name	E-value	Identity	Description

BLAST of Spg002415 vs.


Match Name	E-value	Identity	Description

BLAST of Spg002415 vs.


Match Name	E-value	Identity	Description

BLAST of Spg002415 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg002415.1	Spg002415.1	mRNA