Spg002393 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCCATTTAACCCGTTTTTTCTCGGGAAACTGTTGCTTGCTTATACGGAACGGAAGCTAATTACAACCTAATTCTCCGATTCCACTTCCATTCTCAACTTCTCCGGTTGTAATTCTCTTCCGTTCGGTAGATCAGCCATTGATTCTTCCAACTACTCTCTTCCCAGATCACTGTATTCGGTTTTCCACCAGCGAAAATCTCAGTTACTCGTCCAGCAGCTAGCGAAATGAGCTCCATCTCTCTGTCCAATTCACACGCTCTCGCGCTGGCTTATCCTCACCATCTTCCTCACTCTCAGCGCCGGCAATGGTGTCGCCAGCCTCCGCCTTCGTCTAATTCTATCTCTAGGCCACAGCGGTTTGGGATCTCCGACCGATACTCCGCCGGACCTCCCCTGCCTCTGGTTCTCGCTTCCGCTGGAGCTGGCGTCCTCAACTCCTTTCCGGTTTGTCAATTTCTTTCTCACATTTTCTTACTCCAGGGATACGTTTTTGTCTTTAGGTTATTTACTGGAAATGAAACTCTAATTTTCGGTTTAATGTAATGTGATGAATGACTGGAATTCCATCATGTATCAATCTCTTCGCGTAATTAAGATTTGGATGTTTGTTCTATACGAGCAACTGTGGAAATAATCGCAAAAATTTGCTGCCATTTGGCTGTGAAGTAATCGAAAGCTTATAATGCTCCTTTGTGACGATTCATTGAAGGAAAAGAACGAACACCGTCTAAGTTTATGCTACAAAATTTTAGAATCGAACATAGAACCAACGCAGACGCTCGGGAGTACTTATCAACGATTACTGTTCTCATCCTATTATTGCTACTACATATATTATGTGTTGCGGTTGTTTATAGTTTTTTTAGAGAGGAAGAATTTGGTGAATTAACTTGTCAGACTATTTTAGACCTTCGGTTTTGATATTCTCTTGTCGTTTCTTATCAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAAAGACCTTCGGTTTTGTAGTTCTGTTTGGCTGTTTAGCCGTCCGTATTTGGCTCTTATTTTATTATGGTGATCTTCAGCTCAGAGGAACTTATACGGTTGGTGATTTTATGACGACGAAGGAGAATCTTTATGTTGTCAAACCTACGACAACAGTTGATGAAGGTGCGGTTGATTTATGAATTTTTTTATTTAATATTTTCATTAGAGTTGCTCACGATAATTGTTTAATTCATCGGCTTCTGTGGTTACAGCATTGGAGGCCCTTGTGGAAAAGAGAATAACTGGTTTTCCTGTTGTCGATGATGATTGGAATTTGGTAGAGTTTTTTCCTTTCAACCTTTTTGTGCTTCTCTTGAGTATTTTTTACATTGCCATTGCCAACTTACTGCAGAAGTTAAATACTGAAATCTGATGATATTGTTGTGGAGGGAACTGGGGAAGGGATAGGGATCTTCTGTTTATTGTCATGTCACTGAGAATCATACAAAATAAATAAGTACAAATATTATTGACATTTTTCATTTCTTTTTTGATGGGTTGGAGTGCGTAGATCTATGGTCGAAGTGTTACCCTTGAGCCGTGTCAGGAAGTTTAGCCTATTTACGTTAAGAGTACTTGTTGTAAAGAATCCAAACTACTATTGAAGCCAATAACCTGCCTCACTTAGTCATAATGATTTGGTTCATATGATTTTAGTGCCTTTACACTACTTGCTTCCTGTGGCAGGTTGGAGTCGTCTCAGATTATGATTTATTAGCACTTGATTCCATTTCAGGTACTTTAACTTCTGATTTGCACAGATTTCGCCTTAAATCACCATTATTTGAGGAATTATTCTCACGTATTTTTCTGTTGAAATTGGGTTTCTGACCTTTTATACTTTTGGTTAAATTACTAGTACTTTATTTATCATTCTTATATTGATTCCTAATTTTGAAACACTTCCTTCAAACTGTTTTTGTTTTCTGACAGTCTAAACATTTCCCAGCCATATGCATTGAATTATTTATAATGAGTATTTTCAATGTTAACCGAAATATATATCAATTTAATTTTTACAGCTGATTGAGTTGGTTCTTTGAACTTTATTTGATGGAAAGGTGAAATGAGTTACAAAGTTTCGTGGTTTGTGTGTGATCAATTATGGTGTTTTCTTTATGATGTTATTTTCATCTAGCTATAACTTTTCCAATATATATGTGTGTGTGTATATATATATATATATATATATTTAATATTTTAAAATTTTCAGTCAAATCTAGAAATAGGAAAAATTGATATCAGAATATGTTTAGTTTACTCTCTGTTGCTGGACTCTTAATGCAAAACTACATGCTCTCTCACATCTTTGTATGCATGCAGTCTCTGTATCAAGTATCATCAACAAACCTCTTTTTACTCTCCATCTCTTCTCTTTCTTCTTATAATCTGTTCTTCATCCCTCATTTTTTTTTGCTGCAGATGCACACATCTTTTTATTCCAACCATACATGCATAAATTGCAGTCTCTCATTTCAGAATCTCACTTATACTTACTTGATTTACGTACACTCATTCCCTCCTTTTCAAAAATCTAGGATAAAACAAACATCCTTTGCAAAAATCTAGGGATACAAGTTTTTGGATTACCTTGGGTCCATCATCATTCTTTGGATGGAAATTTGGTTCCAGTGGTCTGCTGCCGTCCTTTTAAGAGGAAAGCAAAAAAACTTCGGTCAGTGCTGTGCGGTTAAGTCAACACTCTGGAGTATTTTGTTGGAAAAAGGAAAAAATATCTTGGGATACATGTAGGGGTCATTACAGAAACTAGAAATATGAAACGGTCACAACTATTATGTTCTAAATACGGTGCATCTTATGGTTTATTTGCTCATTGGCTGATGGCTGTATGAAAAATCTGGTAGTAACCGTAGTTTTAGTATTTTGTTTGTAATACAATGAACATCTTCTTGAGCAATAGTTGGAAACTGGGTTATGGATTCTATAACTGTCAAGCTGATAGATTGTTCAATGCCTCATGTTTATTAATATTTGTTCAAACATGTGGTTGAACTTAATATTCTTTAAGGCCATTGAAAATAGTAAAGGATTTAGAGAGAATGAATTCAAACTATAGTGACTATCGACCTAGAATTTAATATTTTACGAGTTTCATTTGACAATCAAATGTAGTAAGGTCATGTGGTTGTCTAGTAAGATTAGTTGAGGTATGCATATACTGGAATGGACATTCACAATTTTTTTTTTTTTTAAATAGTTCACTCATAATTCATCAATCATTTTCTTTGTACTTTATTGTATTCCATCTATTTCATTGCTCCATCTTACTCAATAATGTTTCTCCCCCTTTTTTTTGGGCTATTAGGTGGTACTCAAAGTGATACTAATCTGTTTCCTGATGTGGATAGTTCGTGGAAAGTATGTAAGCAATGCCCTCATTTATCTTCTGGTTATTTGCTTTTGTTGTTTTGTAGACATTGGGGATGTTTAAAAGGTGCATCGACTCAGAAAACCCAATCAATCCAACCAAACTGTTTGGGTTGAGTTTCTGTTATCTGAACCCAAATCATCAGAGAGTTTTCTTTTTTCTTTTTTAATATTTTTTTACTCTATAAAAATTATTGGATTAATCTTTGGAGTATTCATTTTTAAAAAATGAACATGATATTCAACCGTGACTTTTTTATTTATACATTTCAGTACTACTATTTATTTATGGTGTGAAAACAGGTGAATAGGTTTTTAATTTTTTTTTTCTTACAAAATTTTGAAATAAATAACTTGAACTTAAAAAAAGAAAAAAAGAAAAAGAAAAAGAAAAAGAAAGCTCTAACAACCCAACCAACCAAAATATTACTTAGATGGACTGGGGTTGCATCTTCATCTAGTCAGGTTCATTTGGTTTGAAAAAAAATTGCAACTGAATATTTGTGTTGGGTTCAAGATGCCTCTTAATTCAATTTAGCTCAACTTATTGCATGAACACCCTTAGTAGTTACATATTGGTGATTCTTTCCCTTTTTCTTTTTGGTGCAAAGTCGTTACGATGAGATTTTCTATACATTTGGTCGTAGCACTTCTTTACTGCTATTTTCTTTTGTAATGATCACGTAAGCAGCACCACTTCTTTTGGAAACATCGAATTGCCACAAACACGGCACATGTAAACATATATATCTGCAAAATTATCTTTACAACGTGTTATATATAGTTGCTTATTGTCAATGAAAAATTATTTTGGGGAGAGTGCTTTAAAATTGAGATAGCTATGTAGTCTCAGAAATTAGCTCTCCCTTCCCTTGCTAAGTAAAATTTATTGGAGAAAGAAGAGTCACAAAAATTAGCTCTTAGCTCTGCCACTTGACATCTCTTGATTGAGTAAATTTCTTTGGAGAAAAGAGTCACATGATCATGACCATGAATTATCTGGAGCGGTGGTTCACCATCATCTTTTTTTAATAAAATGAAAAATAAAAGTATATTTTTGCTGATTGTGGTGGCAGACATTCAATGAGATACAGAAACTGCTCAGTAAAACAAATGGTAAAGTTGTTGGCGACCTGATGACCCCTGCTCCACTAGTTGTTCGTGAAACTTCAAATTTAGAAGATGCTGCCAGGTAATCATCTTATATCTTGCAATCTGAATCTATATCATCCATGATTCCTTCAGTGTTTCGACCTAGATATATTTAATCAATTATACTTTTTTTTCTTCTTTTTAACTGTTAATTCTTTAAGATTTTGATCTGCGGGTGCCTGCATGTTATTCTGTGACTCAATGATCATTTGTCACGCTAATTTCTCACAACTTCTTACACAGGGGAAAACATCTTTACCTTTTTATTTTTGGGAATCAAGTATCATACTTTTCTGTAGTTCGTTATGATTCAAACTCTTTCCTTCTGTGTACATAAGCTGTCAAAATTTTTCCATTTTCCAAAAAATAACGTTTAAATGACACATTTTTAGAGAGAAAAAACTTCAGAGTCGATAAACTCATTTTTACATGTTAATCTGTGGCGATCAGAACTGTCTTTTAACTTGGTTATTCCAATGTTCAGGTTGTTGCTTGAAACAAAATATCGTCGATTGCCAGTAGTAGATGCAGATGGCAAGTTGGTAGGAATATTTGTTTTTCTTTTCTGTTCTTCTTCTTCTTTAAAGCATAATTTAACTTTTTAAAGCTCCCTGAATGATAGGCAACCGTCTTATTTGCTTCTGTTTTAACGTTGAAGGTGGGGATCATTACTAGGGGAAACGTCGTTAGAGCTGCCTTGCAGATAAAACGTGCGGCTGAAAGGTCGACACAGCACTAGGATCATTGGCTGGTGTCACTCTGAGGTAAACATATGCAACACAGAAAGCTTAGCATTATTTGTAGATCATGAATATAGTATCTTATAGTTTACACAGGTTTGGATTGTTACAATTACCTGAAATTGTGGACTCCGTCCTCAAGTAAACTATAGCTTTAAAGGGAAGTTTATTGATGCTCTAAAATTCTTCTTCCCAATTTCCTAATTAAGAAATGTTGGTCTATGTCAATATTTGGGTATCCCCAGCATTTCAGGTCAGCCCACTGTAAGATTTCTCTATTAAGTTTTTCATTATTGTTGGAACCTTATCGTTTAAATTTCTCTGAACATTTTGAATATAATCAGTGACCATCTTTCTACTGCCTTGGGGA ATGAGCTCCATCTCTCTGTCCAATTCACACGCTCTCGCGCTGGCTTATCCTCACCATCTTCCTCACTCTCAGCGCCGGCAATGGTGTCGCCAGCCTCCGCCTTCGTCTAATTCTATCTCTAGGCCACAGCGGTTTGGGATCTCCGACCGATACTCCGCCGGACCTCCCCTGCCTCTGGTTCTCGCTTCCGCTGGAGCTGGCGTCCTCAACTCCTTTCCGCTCAGAGGAACTTATACGGTTGGTGATTTTATGACGACGAAGGAGAATCTTTATGTTGTCAAACCTACGACAACAGTTGATGAAGCATTGGAGGCCCTTGTGGAAAAGAGAATAACTGGTTTTCCTGTTGTCGATGATGATTGGAATTTGGTTGGAGTCGTCTCAGATTATGATTTATTAGCACTTGATTCCATTTCAGGTGGTACTCAAAGTGATACTAATCTGTTTCCTGATGTGGATAGTTCGTGGAAAACATTCAATGAGATACAGAAACTGCTCAGTAAAACAAATGGTAAAGTTGTTGGCGACCTGATGACCCCTGCTCCACTAGTTGTTCGTGAAACTTCAAATTTAGAAGATGCTGCCAGGTTGTTGCTTGAAACAAAATATCGTCGATTGCCAGTAGTAGATGCAGATGGCAAGTTGGTGGGGATCATTACTAGGGGAAACGTCGTTAGAGCTGCCTTGCAGATAAAACGTGCGGCTGAAAGGTCGACACAGCACTAG ATGAGCTCCATCTCTCTGTCCAATTCACACGCTCTCGCGCTGGCTTATCCTCACCATCTTCCTCACTCTCAGCGCCGGCAATGGTGTCGCCAGCCTCCGCCTTCGTCTAATTCTATCTCTAGGCCACAGCGGTTTGGGATCTCCGACCGATACTCCGCCGGACCTCCCCTGCCTCTGGTTCTCGCTTCCGCTGGAGCTGGCGTCCTCAACTCCTTTCCGCTCAGAGGAACTTATACGGTTGGTGATTTTATGACGACGAAGGAGAATCTTTATGTTGTCAAACCTACGACAACAGTTGATGAAGCATTGGAGGCCCTTGTGGAAAAGAGAATAACTGGTTTTCCTGTTGTCGATGATGATTGGAATTTGGTTGGAGTCGTCTCAGATTATGATTTATTAGCACTTGATTCCATTTCAGGTGGTACTCAAAGTGATACTAATCTGTTTCCTGATGTGGATAGTTCGTGGAAAACATTCAATGAGATACAGAAACTGCTCAGTAAAACAAATGGTAAAGTTGTTGGCGACCTGATGACCCCTGCTCCACTAGTTGTTCGTGAAACTTCAAATTTAGAAGATGCTGCCAGGTTGTTGCTTGAAACAAAATATCGTCGATTGCCAGTAGTAGATGCAGATGGCAAGTTGGTGGGGATCATTACTAGGGGAAACGTCGTTAGAGCTGCCTTGCAGATAAAACGTGCGGCTGAAAGGTCGACACAGCACTAG MSSISLSNSHALALAYPHHLPHSQRRQWCRQPPPSSNSISRPQRFGISDRYSAGPPLPLVLASAGAGVLNSFPLRGTYTVGDFMTTKENLYVVKPTTTVDEALEALVEKRITGFPVVDDDWNLVGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNEIQKLLSKTNGKVVGDLMTPAPLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAERSTQH Homology
BLAST of Spg002393 vs. NCBI nr
Match: XP_038894434.1 (CBS domain-containing protein CBSX2, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 429.5 bits (1103), Expect = 1.9e-116 Identity = 220/239 (92.05%), Postives = 229/239 (95.82%), Query Frame = 0
BLAST of Spg002393 vs. NCBI nr
Match: XP_008456144.1 (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis melo] >KAA0037139.1 CBS domain-containing protein CBSX1 [Cucumis melo var. makuwa] >TYK13936.1 CBS domain-containing protein CBSX1 [Cucumis melo var. makuwa]) HSP 1 Score: 420.2 bits (1079), Expect = 1.2e-113 Identity = 215/239 (89.96%), Postives = 225/239 (94.14%), Query Frame = 0
BLAST of Spg002393 vs. NCBI nr
Match: XP_004140707.1 (CBS domain-containing protein CBSX1, chloroplastic [Cucumis sativus] >KGN57513.1 hypothetical protein Csa_010649 [Cucumis sativus]) HSP 1 Score: 416.4 bits (1069), Expect = 1.7e-112 Identity = 213/239 (89.12%), Postives = 223/239 (93.31%), Query Frame = 0
BLAST of Spg002393 vs. NCBI nr
Match: XP_023535982.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 415.6 bits (1067), Expect = 2.9e-112 Identity = 215/239 (89.96%), Postives = 228/239 (95.40%), Query Frame = 0
BLAST of Spg002393 vs. NCBI nr
Match: XP_022982496.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 415.6 bits (1067), Expect = 2.9e-112 Identity = 216/239 (90.38%), Postives = 228/239 (95.40%), Query Frame = 0
BLAST of Spg002393 vs. ExPASy Swiss-Prot
Match: O23193 (CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX1 PE=1 SV=2) HSP 1 Score: 272.7 bits (696), Expect = 4.0e-72 Identity = 138/207 (66.67%), Postives = 171/207 (82.61%), Query Frame = 0
BLAST of Spg002393 vs. ExPASy Swiss-Prot
Match: Q9C5D0 (CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX2 PE=1 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 5.2e-72 Identity = 157/248 (63.31%), Postives = 182/248 (73.39%), Query Frame = 0
BLAST of Spg002393 vs. ExPASy Swiss-Prot
Match: Q58821 (Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1426 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.3e-10 Identity = 46/170 (27.06%), Postives = 90/170 (52.94%), Query Frame = 0
BLAST of Spg002393 vs. ExPASy Swiss-Prot
Match: O58045 (Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=guaB PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.8e-09 Identity = 42/138 (30.43%), Postives = 69/138 (50.00%), Query Frame = 0
BLAST of Spg002393 vs. ExPASy Swiss-Prot
Match: Q54H97 (CBS domain-containing protein DDB_G0289609 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0289609 PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.8e-09 Identity = 40/144 (27.78%), Postives = 75/144 (52.08%), Query Frame = 0
BLAST of Spg002393 vs. ExPASy TrEMBL
Match: A0A5A7T6Y9 (CBS domain-containing protein CBSX1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001350 PE=4 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 5.7e-114 Identity = 215/239 (89.96%), Postives = 225/239 (94.14%), Query Frame = 0
BLAST of Spg002393 vs. ExPASy TrEMBL
Match: A0A1S3C251 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103496172 PE=4 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 5.7e-114 Identity = 215/239 (89.96%), Postives = 225/239 (94.14%), Query Frame = 0
BLAST of Spg002393 vs. ExPASy TrEMBL
Match: A0A0A0L716 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G202220 PE=4 SV=1) HSP 1 Score: 416.4 bits (1069), Expect = 8.2e-113 Identity = 213/239 (89.12%), Postives = 223/239 (93.31%), Query Frame = 0
BLAST of Spg002393 vs. ExPASy TrEMBL
Match: A0A6J1IZH4 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111481297 PE=4 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 1.4e-112 Identity = 216/239 (90.38%), Postives = 228/239 (95.40%), Query Frame = 0
BLAST of Spg002393 vs. ExPASy TrEMBL
Match: A0A6J1J9C6 (CBS domain-containing protein CBSX2, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482911 PE=4 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 4.1e-112 Identity = 213/239 (89.12%), Postives = 221/239 (92.47%), Query Frame = 0
BLAST of Spg002393 vs. TAIR 10
Match: AT4G36910.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 272.7 bits (696), Expect = 2.8e-73 Identity = 138/207 (66.67%), Postives = 171/207 (82.61%), Query Frame = 0
BLAST of Spg002393 vs. TAIR 10
Match: AT4G34120.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 272.3 bits (695), Expect = 3.7e-73 Identity = 157/248 (63.31%), Postives = 182/248 (73.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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