Spg002378 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg002378
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionlate embryogenesis abundant protein At5g17165-like
Locationscaffold6: 3090507 .. 3097723 (-)
RNA-Seq ExpressionSpg002378
SyntenySpg002378
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCACGTGGTCCAATTAAAAACGGAAGGGAAATTCCGTACGCGAGATGAAAGTAGGTGCGGACGGACGGACGGAGAAGGCAATTTGCGTTGCGATTGGGAAAGCTCTTGTCGGCTTTTGGCGGATACAATACGACGCCGTACTGGAGCGCACTATAAAACAAGGATTTGCCACTAACGATCAGAATCAATTATCAAGAATAATTAATCGCCCTTTTTCTTCTCCATTATCTCTCTCTCTCCCTCTCTCTCTTTCTGTGCTTAGACGTTTCTCTGGTTCTTCGTTTTTTTCTTTTTCTCAATCTTCAAGCCTCAATTGTATGGCCGCTAATTCGAGGAGCGCAGGAGCGATCGCCGGCTTGGGGAAACGAATCACTAACCAGATCTGGACCAGCGATCCACTTCGCAATTCTGCGATCTCTTCCTCTGCTCCACAGTTCAGGTTCTTCTTCTTCTTTTTCTTCGTTTTATTCTTTGTGTAAATATTCATATCGCAATCTGATGCTGTTTCTTCGTTATTCTATTTTTTTTTTTTTTGTTCTCTGGTAGATGTAATTATTGCATTCTTGTTGCGAAATTTTCTCTGAAAAGTCGTTCTGATTGTTGTTCCATTTCTTCTTCTTCACGCTGATTGCCTTTTTTGAACAACTTCATACTGACGCACATTGATGATCTTCTTCATTACGTGAGTTTTAGGTCTCTCTTCTTTCGCTCTCTGCTTTTGATCATATGCTTTTCTCGGTTACTTCTGATTTCGGATTTTTCTTCTTTAGAAAAGGTTTTAAGATTCTAATTCGCCTTCCGATTTTCCCGTCATATGCAGAACTACGCCTAACTTGCTTAGAAAATTGGAAATTATTCTCTCCTTTCTTATGTTTTATTTTCACCTCTTCCTCTTCGTTTTTGGTTCAATTTTGTGGATGTTTTTGTCAATTTGTTTTTATTCAGTGTTTGTTCGTTCACGCTGTTCATAATTTGACACTCCTTGCTGTTGAAGAAGACTTGGAATTAGAGAGGAATAATTCTTACTCCTTTGAATCTTTGTTGAAATTTGGGGAAGAGATGGAGTAAATCTGGCTATTTCGTGATCTTTAGCCACCGTTTTGGTTGATACAGACGACATGAAATCGAAAATCCAAAAGTCGTGAAATATTAAAATTAAATAACCAATTTATTTTTTAATATATTAAATAATTCATTCATTATAACAATTTTTTTGTTTAAAAAAATTGTACTTAATCTTCATTAATCAGTATTATAATTACTTACTAATTTGTTCTCTTCTTGCTAATTTTAAATTCTCAGTTCATATTATGGACTGTTTTTATTTGTTTTTTTAAGACATATTTTATGTCTTAGTATTACTTTCGGAATTTAGTTTTTTATTCTTTATTTTTTTTTCACTAATTTGATAATTCTATTATCTGTCTATGTTAGAAAGATCCATGTTAAAATGAAACAGAGTCATCTTAATCTTAATTATCTCCTCTTAAGCATTTTCAGCTTTAAGAAAATCTTGAAATTACAAATGGCCTCCGAAGAAAAGACGTGTAAATTTATTGTGAAAAGACTTACTTATGGCTACAATATATTTAATACATTTTAGCTTTACAATTATTTTAGTTTTATTATAGCGAAAAATGAACATTATGAAAATTTTAACATTTAATTACTTATAATTAAGTATGATTTGAAATAATATTTTAACCTCAGAGTTGACGTAATTAAATATTTTCAGACCACAAATCTTCAAAACTTTTCTCTTTTGCTTTCTGTTTTTATGGTCAAATTAAATCTTCAAATTTTAAACCTACCTAACACATTTTAATATTCAAAATAACAACAACCCGATATTTTTAATTCCAAGCTTCTCAAATTCATTCTTGTATTACAAAATTCCAAATGTAGTTTTTTCTGAAAAAATAAAAATTCTGAACCTTAAAAGTTAAAACTCTCCTTCAGTTTCCACTCTATGTGGCGTAGGATCTTTACTAGTAAAACCTACGATAATAAACTATCTGTTTCTCATTTGTACAATTTATTTTTATTTTGAAGTATATTAATAGGAAGTCTCTAGAAATACTCAAATTCCTAAACCCTAGGGTCTATCTATGTGTATTAATAGAATTTATTGTATAGGATGATTTTAAACTCATTCATTTAACACATTTTCGAAGGATAAGGTTTAGTTTCTCAGTGTTAGTTGACTGTTACTCCATTCAACTTTAGACTAATTAAAAAAACAATAAAGTGAGACACTTCCGATATGGTTTTGTAGACCTTTTGGTTCGTAAAGTAATTTCATTGACTTTTTTTCTTTGGGGGGGGGGGGGGGGGGGGCGGTGGAATTAGATTGCCTGTCTGTTCAAATTTGATATTTTATTTTTCACAATTTTTAAGATATTATAAGTTATCATCTGCTGACTTAATAAACATATACTTCCAAAAGAAAACAAAAAACTTAATAAATATATAGATAAGGTGATTGATCCCAAAACTAGTTCCATTCTACATGTCCTTGACCACTATTCACATTTTGTACTATAAGAAAGTCTATTCATATTAAAACTTCTTAAAAAGATTATTTGTTTCAATTTTCAAGACACAAAAATGCAAGAATTTTAAGTAGTCTAACAAAAAAATGGTTAATATTGCCAACAAGAGCACTCAATTAGTATAAAACTTGTATTCTGACCTTGAGATTTAACCCCCACTCGTACATGTAAAAAAAAAAAAGGTTAATAGTAACCAATAAGGGTAGAAATAGCAAAAGTAAAAAATAATTAGTTAATATTGGCAATAACATTAATTAATAATTTTAAAATTTATTAATTATTACTAATTTTGATAATTTGATTAATCAAATTTATATTGATTGAACTACCTTATATATTATATAAAACAAACGGATCGCTAAATTTCACTGTTAATTATTCAATAACGTTTTGATTTTTGAAAAGTAACCAACAAAAAGAAAAAAAAAAGTATAATCAACAGTTTTCGAATCCATAGACTATACTATACTTAAATATTTAAAATTTAGAAAAAAAAAACAAAAACAAAAATCTGTATGGTACGGTATGAGTATAAATATCTATAGTATTCCCCCTTTTTTCGTGCTAAAAAAGTTCAAACTCTCTATGGTATTAGTATCCCCCGTTTGGCTGTTTTTATGAATCATTTATTCCCTCAAAAAAAAAAAAAAAAAAAAAACTATAGTCTAGATGCTGGAAGGGTTGCTGACAATTAAAGCTGAGTGTCTGTGAGATGATGTGGCTGATGTTCATCCACTCCTTTCAGCTGACTTTTTGCTTCACACTTTTTTCTTTTTCTTTTTTGATTGGGACCGAATGGGTTTGAATAGGATAGAATAGGGAGCCAGTGAGGGGACAGGCTAGGGTTGGCGACTCGTCCTTCACCCTAATCAGATGTTTTCCATAAATGCAATGGGAGTATCATTCATCTAGCCCGCCCTTTGTTTGAGTCATCACACGTAGCTTTCACAATCCATCAAACTATTATTATTATTATTTTTTAGTTCAACCACGTTTGAATTTGAATTTCTGATCTATTCACAGTCATGTTAATTATCTTTGAATTATGTTTATTTAGATATTTTAATTAAATTAATGTATATTTATTTTTTTGTTACTGAGTACTTAAATAAGTAGTATGTCTAATTTCTTAATGTATGGTAATTATGATGTATTTAGATATATGCTTTTTTTTTTTCCTTAACTTGTTGGGTAGAATATTGGGATGCTGTTGAGAAACCAAGGGACTGTTTTTGGTGCATTTTCTCAAAGTTGTTTCAAACAAATCTCTTTAAATTGATTTCTGTTGTGTTTTAATTTTAAAAATTGTTTGAATTTCTTTTATCATATTGTTTTCATTTAGTTCTTCCATGCAACAATTTAAAAACACTACGAAGTTATACATAAAAAAAATGAACAATAATCATGAACGAATAATTAATGGTTAAAAATCTATATTTGAAGAATTATTATGCCTTATAACTGTAGTATATCAAGGGTTCTTTTTCATTTTTTAAAAATAGAAATATCTTTAAACTGTATTTTCAAACCATTCATAAGTTGTTTCTTAAGAAAGTCCATACATCTCGAATAGTTTCATACTATATGTTCACTTTTTTTTTAAGAAAAAAACATCTGCTCACATTTAATCAGACCACTAACTATTGTTTCATTCAGCTGAAAATCTCACACAGCTTTAAATATTAGAGTAGCGATAGGAATATTTCCATGTTTATTTGATGTCTTCTTGCATCCCACGTGGAACATGTGTAAAATCAAATTTGTTTGTATCCGATGGGCTAGCTGGCTCTTATCCAGTAAAATCCGATTTGTTGATCACCAGATATTTGGAATAGGAACTGATCAATCGACAGATATTCAACCATCTATATCTATTCCGAGAGATTATTTCGAATAGCTATAATGTGGTGGTCACACTGAATAATGTTTCCATCTCCACTCTTTCACGTCTTATCCTTTCAAAATATCTCTTATTGCCTTTGTGGGGTGAGAGATAAGCATGATTCCCTTTCACGTTAGCTAGCTTTGATTTATTTGCCTTGAAAGTTATCATATCTATATGACCTTTATTTGGTTCAAGTGGGTATGAATGATGTGATATTTGTCTGGAATTATTGCAACTGATCGTTTACTATGCTTGGCTTCTTCTGCAAGTTTATGATATATTTATTTACGGTGCTGAAGTATGCTATTTTTAGCTTCTTTTTTTTTTCTTAGTTTCATTCCATTTTTAATAATTTTGTTCTCAATATTTTCTTTCTTAAAGTTTTGATTGAATTTTCATAGTGTCACCATTTTCAATCAAATCGTTATTTAATAATGTTCTTGAAATTAAACAAACGAGCAATGATTTGGTGCTTTGAAAATATCATTCTCTATGAGTTGATGTTTATGTGATGTTAAATAATTATCATCCACTAGTAGATTAAAAAACTCAATTAACCCTATCTGATTCAAAAGTTAAAAAAACAATGTTTTTTATCAGGGCAGGTAAAGATTAGACTTTTACCATTTAAATAACATTAGCTTATAGAATTCCACATCGCCATTTCTTTATTTCGTCTTAAAGAAATAATTAAACAAAGATTTGATTGGAGCCTAATATTAGATATTAAACTTAGAAAATGAGTATAAACATCAGAAATTCAATAATATATTTAAGCTTGTTGAGTTGATCTTTTGGGGAGGGTTAGAGGTTGGAATTGAATATTTTGATGCGACTTTCCATCAAGTTGCTGGGTGGGGTACAAACCATCACGTGGTGGGACTGTGTTGTTCTTATCATTTGAAACTGTTAGTTATTATAAACATAATTGCTTTTTCTCCGTGTCTTGTCTTAAGCATGCTCTTGTTCTTTTTATCCTGTAACCTCTTCCCCAATCCCCACCTGTGGTCCATGCAGTCGATTCGGATAACATTATTGATTATAATTTTTACAAGTTCGTTTTACTTTAATCTTTAAGGTCCATTTGATAACTATTTAGATTCCGTTTAATAACCATTTGGTTTTTTGTTTTTGGTTTTTGAAAATTATGTTTGTTTTCTCATAAATTTCCTACCATGACTTTATGACTTCCTAGTTAATGTTGCATTTGAATTCCTAGCCAAATTTTATAAACAAAAATAACTTTTTGAAAACAATTTTTTTTTTTGAAAACAGTTTCCAAAATTGGACTTAGTTTTTGGAAACAAGGTAAAAGATTGATACTAAAACCAAGAAACTTATAGTGGAAGTTATATGTGTATAAGCTTAATTTTCAAAAACTAAAAACCAAAAAACCAAATAGTTAAGTTCCATTTGATAACCATTTGGTTTTTGAAAATTATGTTTGTTTTCTCTCAATTTTCCTCCCAAGGGTTTCATCTTTGTCAAAAGCACATTTGGATAACTAACCCAATTCCAAAAACAAAAACAAGTTTTTGAAAACTATTTTTTTTTTTTAGTTTTCAAAATTTTGGCTTGGTTTTTTAAAACGTTGAAAGAATGCATTAGGAAAACAAAGAAATTTGTAGGTGGAAGTAGTGTTCATAGACTTAATTTTCAAAAACCAAAAACCAAATGGTTATCAAACGAGATCTTATTAAATGGGACCTTAGTTTTTTGTTTTTGAAAATTAAGCTTAAAAACACTACTTCCACCAATAAGTTTTTTGGTTTTGTTATCTAGCATCTTCTCATGTCTTCAAAAACCAAGTCAAGTTTTGCAAACTAAGAAAAGTAGTTTTCAAAAACTTTTGTTTTTGAAATTTGACTAGGAATTCAAATATACTGTTAACAAAGATAAAAACCATTGTAAGGAAATTGAAATAAAACAATTATAATTTTCAAAAATAAAAAAACTAAATGATTATCAAACGAGACCTAAACCTTTCAAAATTCCGTTTACTCTCAACTTTTCAATATTTTGTTTCTATTCTTTAATTTTATCCATTAGTCATTTATCATATATATTTTGATTATTTTTCTCACTTCATTTTTTATTATTCGATTTCAATCTTTAATCTTTATTTGTCAAAATAGAGTATTATTGATGGGAATGAAAAACAAACCTGAAACAGGAGGGCAGCTCACACCTCAGCATATGACAAGAACCCCGACGAGCAAGTCAGACCAAGCATAGTCCCCGATGAAGTGATTCAGGCTCAAGCTGCTGATAAGTACTGGGCTCCTCATCCACAGACCGGTGTTTTCGGGCCGACCAGCGACCACCCTGCTGCAGCAGCAGTGAACCGTGCTGCAGATGGTGGCAACTACTCTGTCGGGGAGGAGGAAAAGGCTTGGTTCCGACCAACCAGTCTGGAGGATTCCGAGAAGCCCCACGCATCCTAGGAGCTGGGGCTTCCGCTACTATAAGGGATTGTTGTACTTTTGGCCATCGGACATTAGACAACAAGGAGACAAACTAAGAAGGTACTAAATAAAGAAGATGTTTGTTTTTGTTTCTGTACTAAATGTTTGGAGTTTTGAGTTGCTCAAGGCTGAGGTAATCTGGCTAAGGATGCTTTGGCTCAGCTTGTTATTCGGTATTGTAGCAACCTTATTAAGGTGTTGGATGTTTCGTTGTTCTCCTTTGACTATGCAAAATAGTGTGGTTTTATAACTACTTCTCCATCCAACGATATATATGTGCATTTTTTGCTTACTTTCTTATAAAAAAAGAAAAAA

mRNA sequence

ATGAAAGTAGGTGCGGACGGACGGACGGAGAAGGCAATTTGCGTTGCGATTGGGAAAGCTCTTGTCGGCTTTTGGCGGATACAATACGACGCCGTACTGGAGCGCACTATAAAACAAGGATTTGCCACTAACGATCAGAATCAATTATCAAGAATAATTAATCGCCCTTTTTCTTCTCCATTATCTCTCTCTCTCCCTCTCTCTCTTTCTGTGCTTAGACGTTTCTCTGGTTCTTCGTTTTTTTCTTTTTCTCAATCTTCAAGCCTCAATTGTATGGCCGCTAATTCGAGGAGCGCAGGAGCGATCGCCGGCTTGGGGAAACGAATCACTAACCAGATCTGGACCAGCGATCCACTTCGCAATTCTGCGATCTCTTCCTCTGCTCCACAGTTCAGGAGGGCAGCTCACACCTCAGCATATGACAAGAACCCCGACGAGCAAGTCAGACCAAGCATAGTCCCCGATGAAGTGATTCAGGCTCAAGCTGCTGATAAGTACTGGGCTCCTCATCCACAGACCGGTGTTTTCGGGCCGACCAGCGACCACCCTGCTGCAGCAGCAGTGAACCGTGCTGCAGATGGTGGCAACTACTCTGTCGGGGAGGAGGAAAAGGCTTGGTTCCGACCAACCAGTCTGGAGGATTCCGAGAAGCCCCACGCATCCTAG

Coding sequence (CDS)

ATGAAAGTAGGTGCGGACGGACGGACGGAGAAGGCAATTTGCGTTGCGATTGGGAAAGCTCTTGTCGGCTTTTGGCGGATACAATACGACGCCGTACTGGAGCGCACTATAAAACAAGGATTTGCCACTAACGATCAGAATCAATTATCAAGAATAATTAATCGCCCTTTTTCTTCTCCATTATCTCTCTCTCTCCCTCTCTCTCTTTCTGTGCTTAGACGTTTCTCTGGTTCTTCGTTTTTTTCTTTTTCTCAATCTTCAAGCCTCAATTGTATGGCCGCTAATTCGAGGAGCGCAGGAGCGATCGCCGGCTTGGGGAAACGAATCACTAACCAGATCTGGACCAGCGATCCACTTCGCAATTCTGCGATCTCTTCCTCTGCTCCACAGTTCAGGAGGGCAGCTCACACCTCAGCATATGACAAGAACCCCGACGAGCAAGTCAGACCAAGCATAGTCCCCGATGAAGTGATTCAGGCTCAAGCTGCTGATAAGTACTGGGCTCCTCATCCACAGACCGGTGTTTTCGGGCCGACCAGCGACCACCCTGCTGCAGCAGCAGTGAACCGTGCTGCAGATGGTGGCAACTACTCTGTCGGGGAGGAGGAAAAGGCTTGGTTCCGACCAACCAGTCTGGAGGATTCCGAGAAGCCCCACGCATCCTAG

Protein sequence

MKVGADGRTEKAICVAIGKALVGFWRIQYDAVLERTIKQGFATNDQNQLSRIINRPFSSPLSLSLPLSLSVLRRFSGSSFFSFSQSSSLNCMAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPQFRRAAHTSAYDKNPDEQVRPSIVPDEVIQAQAADKYWAPHPQTGVFGPTSDHPAAAAVNRAADGGNYSVGEEEKAWFRPTSLEDSEKPHAS
Homology
[Close]
BLAST of Spg002378 vs. NCBI nr
Match: XP_038901450.1 (late embryogenesis abundant protein At5g17165-like [Benincasa hispida])

HSP 1 Score: 236.1 bits (601), Expect = 2.9e-58
Identity = 115/128 (89.84%), Postives = 121/128 (94.53%), Query Frame = 0 

Query: 92  MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPQFRRAAHTSAYDKNPDEQVRPS 151
           MAANSRSAG IAGLGKRIT+QIWTSDPLRNS ISSSAP+ RRAAHTSAYDKNPDEQVRPS
Sbjct: 1   MAANSRSAGVIAGLGKRITDQIWTSDPLRNSVISSSAPKIRRAAHTSAYDKNPDEQVRPS 60

Query: 152 IVPDEVIQAQAADKYWAPHPQTGVFGPTSDHPAAAAVNRAADGGNYSVGEEEKAWFRPTS 211
           +VPD+VIQ+QAADKYWAPHPQTGVFGP SD+PAAAA NRAADGGNYS  EEEKAWFRPTS
Sbjct: 61  VVPDDVIQSQAADKYWAPHPQTGVFGPASDNPAAAAANRAADGGNYSAVEEEKAWFRPTS 120

Query: 212 LEDSEKPH 220
           LEDSEKPH
Sbjct: 121 LEDSEKPH 128

[Close]
BLAST of Spg002378 vs. NCBI nr
Match: XP_008453829.1 (PREDICTED: uncharacterized protein LOC103494437 [Cucumis melo])

HSP 1 Score: 223.8 bits (569), Expect = 1.5e-54
Identity = 115/130 (88.46%), Postives = 120/130 (92.31%), Query Frame = 0 

Query: 92  MAANSRSAGAIAGLGKRITNQIWT-SDPLRNSAISSSAPQFRRAAHTSAYDKNPDEQVRP 151
           MAANSRSAGAIAGLGKRIT+QIWT SD LRNS ISSSAP+FRRAAHTS YDKNP+EQVRP
Sbjct: 1   MAANSRSAGAIAGLGKRITDQIWTSSDSLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP 60

Query: 152 SIVPDEVIQAQAADKYWAPHPQTGVFGPTSDHPAA-AAVNRAADGGNYSVGEEEKAWFRP 211
           SIVPD+VIQ QAADKYWAPHPQTGVFGPTSD+PAA AA NRAAD GNYS  EEEKAWFRP
Sbjct: 61  SIVPDDVIQPQAADKYWAPHPQTGVFGPTSDNPAAVAAANRAADVGNYSAAEEEKAWFRP 120

Query: 212 TSLEDSEKPH 220
           TSLEDSEKPH
Sbjct: 121 TSLEDSEKPH 130

[Close]
BLAST of Spg002378 vs. NCBI nr
Match: XP_004146886.1 (late embryogenesis abundant protein At5g17165 [Cucumis sativus] >KAE8649143.1 hypothetical protein Csa_014444 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 7.3e-54
Identity = 113/131 (86.26%), Postives = 118/131 (90.08%), Query Frame = 0 

Query: 92  MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPQFRRAAHTSAYDKNPDEQVRPS 151
           MAANSRS GAIAGLGKRIT+QIWT DPLRNS ISSSAP+FRRAAHTS YDKNP+EQVRPS
Sbjct: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60

Query: 152 IVPDEVIQAQ-AADKYWAPHPQTGVFGPTSDHPA--AAAVNRAADGGNYSVGEEEKAWFR 211
           IVPD+VIQ Q AAD YWAPHPQTGVFGP SD+PA  AAA NRAADGGNYS  EEEKAWFR
Sbjct: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120

Query: 212 PTSLEDSEKPH 220
           PTSLEDSEKPH
Sbjct: 121 PTSLEDSEKPH 131

[Close]
BLAST of Spg002378 vs. NCBI nr
Match: XP_022140901.1 (late embryogenesis abundant protein At5g17165-like [Momordica charantia])

HSP 1 Score: 218.4 bits (555), Expect = 6.2e-53
Identity = 112/128 (87.50%), Postives = 118/128 (92.19%), Query Frame = 0 

Query: 92  MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPQFRRAAHTSAYDKNPDEQVRPS 151
           MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAP+FRRAAHTS YDKNPDEQ RPS
Sbjct: 1   MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS 60

Query: 152 IVPDEVIQAQAADKYWAPHPQTGVFGPTSDHPAAAAVNRAADGGNYSVGEEEKAWFRPTS 211
           IVPDEVIQ Q  DKYWAPHPQTGVFGP +DHP AAA  +AA+GG+Y+V EEEKAWFRPTS
Sbjct: 61  IVPDEVIQPQ-PDKYWAPHPQTGVFGPVTDHPTAAAA-KAANGGSYAV-EEEKAWFRPTS 120

Query: 212 LEDSEKPH 220
           LEDSEKPH
Sbjct: 121 LEDSEKPH 125

[Close]
BLAST of Spg002378 vs. NCBI nr
Match: XP_022984594.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita maxima])

HSP 1 Score: 218.4 bits (555), Expect = 6.2e-53
Identity = 107/128 (83.59%), Postives = 115/128 (89.84%), Query Frame = 0 

Query: 92  MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPQFRRAAHTSAYDKNPDEQVRPS 151
           MAANSRSAGAIAGL KRIT+QIWT DPLRNSAISS+AP+FRRAAHTS YDKN DEQVRPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWTRDPLRNSAISSAAPKFRRAAHTSTYDKNHDEQVRPS 60

Query: 152 IVPDEVIQAQAADKYWAPHPQTGVFGPTSDHPAAAAVNRAADGGNYSVGEEEKAWFRPTS 211
           IVPD+VIQ Q+ADKYWAPHPQTGVFGP + +P AA  N  ADGGNYS+ EEEKAWFRPTS
Sbjct: 61  IVPDDVIQPQSADKYWAPHPQTGVFGPATINPMAAVANHTADGGNYSIVEEEKAWFRPTS 120

Query: 212 LEDSEKPH 220
           LEDSEKPH
Sbjct: 121 LEDSEKPH 128

[Close]
BLAST of Spg002378 vs. ExPASy Swiss-Prot
Match: F4KFM8 (Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN=At5g17165 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.0e-19
Identity = 62/130 (47.69%), Postives = 80/130 (61.54%), Query Frame = 0 

Query: 92  MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPQFRRAAHTSAYDKNPDEQVRPS 151
           MAA S++   I  +G+ I N +      R+ A++      R   HTSAYDKN +E+++PS
Sbjct: 1   MAAKSKN---IQVVGRHIVNGV------RSRAVAYGLFTSRN-DHTSAYDKNVEEELQPS 60

Query: 152 IVPDEVIQAQAADKYWAPHPQTGVFGPTSDHPAAAAVNRAADGGNYSVGEEEKAWFRPTS 211
            VPDE+I+   +DKYW+PHPQTGVFGP+S    A    R   GG      EEKAWFRPTS
Sbjct: 61  QVPDEMIKPD-SDKYWSPHPQTGVFGPSSSSTNAKDEFR---GGQEDSVMEEKAWFRPTS 116

Query: 212 LEDSEKPHAS 222
           LED +K H S
Sbjct: 121 LEDLDKTHHS 116

[Close]
BLAST of Spg002378 vs. ExPASy TrEMBL
Match: A0A1S3BYE5 (uncharacterized protein LOC103494437 OS=Cucumis melo OX=3656 GN=LOC103494437 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 7.2e-55
Identity = 115/130 (88.46%), Postives = 120/130 (92.31%), Query Frame = 0 

Query: 92  MAANSRSAGAIAGLGKRITNQIWT-SDPLRNSAISSSAPQFRRAAHTSAYDKNPDEQVRP 151
           MAANSRSAGAIAGLGKRIT+QIWT SD LRNS ISSSAP+FRRAAHTS YDKNP+EQVRP
Sbjct: 1   MAANSRSAGAIAGLGKRITDQIWTSSDSLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP 60

Query: 152 SIVPDEVIQAQAADKYWAPHPQTGVFGPTSDHPAA-AAVNRAADGGNYSVGEEEKAWFRP 211
           SIVPD+VIQ QAADKYWAPHPQTGVFGPTSD+PAA AA NRAAD GNYS  EEEKAWFRP
Sbjct: 61  SIVPDDVIQPQAADKYWAPHPQTGVFGPTSDNPAAVAAANRAADVGNYSAAEEEKAWFRP 120

Query: 212 TSLEDSEKPH 220
           TSLEDSEKPH
Sbjct: 121 TSLEDSEKPH 130

[Close]
BLAST of Spg002378 vs. ExPASy TrEMBL
Match: A0A6J1JAZ8 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 GN=LOC111482838 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 3.0e-53
Identity = 107/128 (83.59%), Postives = 115/128 (89.84%), Query Frame = 0 

Query: 92  MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPQFRRAAHTSAYDKNPDEQVRPS 151
           MAANSRSAGAIAGL KRIT+QIWT DPLRNSAISS+AP+FRRAAHTS YDKN DEQVRPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWTRDPLRNSAISSAAPKFRRAAHTSTYDKNHDEQVRPS 60

Query: 152 IVPDEVIQAQAADKYWAPHPQTGVFGPTSDHPAAAAVNRAADGGNYSVGEEEKAWFRPTS 211
           IVPD+VIQ Q+ADKYWAPHPQTGVFGP + +P AA  N  ADGGNYS+ EEEKAWFRPTS
Sbjct: 61  IVPDDVIQPQSADKYWAPHPQTGVFGPATINPMAAVANHTADGGNYSIVEEEKAWFRPTS 120

Query: 212 LEDSEKPH 220
           LEDSEKPH
Sbjct: 121 LEDSEKPH 128

[Close]
BLAST of Spg002378 vs. ExPASy TrEMBL
Match: A0A6J1CHE9 (late embryogenesis abundant protein At5g17165-like OS=Momordica charantia OX=3673 GN=LOC111011456 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 3.0e-53
Identity = 112/128 (87.50%), Postives = 118/128 (92.19%), Query Frame = 0 

Query: 92  MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPQFRRAAHTSAYDKNPDEQVRPS 151
           MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAP+FRRAAHTS YDKNPDEQ RPS
Sbjct: 1   MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS 60

Query: 152 IVPDEVIQAQAADKYWAPHPQTGVFGPTSDHPAAAAVNRAADGGNYSVGEEEKAWFRPTS 211
           IVPDEVIQ Q  DKYWAPHPQTGVFGP +DHP AAA  +AA+GG+Y+V EEEKAWFRPTS
Sbjct: 61  IVPDEVIQPQ-PDKYWAPHPQTGVFGPVTDHPTAAAA-KAANGGSYAV-EEEKAWFRPTS 120

Query: 212 LEDSEKPH 220
           LEDSEKPH
Sbjct: 121 LEDSEKPH 125

[Close]
BLAST of Spg002378 vs. ExPASy TrEMBL
Match: A0A6J1FNH5 (late embryogenesis abundant protein At5g17165-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447057 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.3e-51
Identity = 108/128 (84.38%), Postives = 115/128 (89.84%), Query Frame = 0 

Query: 92  MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPQFRRAAHTSAYDKNPDEQVRPS 151
           MAANSRSAGAIAGLGKRITNQIWTSD    SAISSSA +FRRAAHTSAYDKNPDEQVRPS
Sbjct: 1   MAANSRSAGAIAGLGKRITNQIWTSD----SAISSSALKFRRAAHTSAYDKNPDEQVRPS 60

Query: 152 IVPDEVIQAQAADKYWAPHPQTGVFGPTSDHPAAAAVNRAADGGNYSVGEEEKAWFRPTS 211
           IVPD+VIQ QAA+KYWAPHP TGVFGP +D P AAA +RAADGGN++  EEEKAWFRPTS
Sbjct: 61  IVPDDVIQPQAAEKYWAPHPHTGVFGPEADQPTAAAGSRAADGGNHAAAEEEKAWFRPTS 120

Query: 212 LEDSEKPH 220
           LEDSEKPH
Sbjct: 121 LEDSEKPH 124

[Close]
BLAST of Spg002378 vs. ExPASy TrEMBL
Match: A0A6J1E3E9 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662 GN=LOC111430463 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 6.3e-51
Identity = 103/128 (80.47%), Postives = 114/128 (89.06%), Query Frame = 0 

Query: 92  MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPQFRRAAHTSAYDKNPDEQVRPS 151
           MAANSRSAGAIAGL KRIT+QIW  DPLRNSAISS+AP+FRRAAH+S YDKN DEQVRPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWNRDPLRNSAISSAAPKFRRAAHSSTYDKNHDEQVRPS 60

Query: 152 IVPDEVIQAQAADKYWAPHPQTGVFGPTSDHPAAAAVNRAADGGNYSVGEEEKAWFRPTS 211
           IVPD+VIQ Q+ADKYWAP+PQTGVFGP + +P AA  N  A+GGNYS+ EEEKAWFRPTS
Sbjct: 61  IVPDDVIQPQSADKYWAPNPQTGVFGPATINPVAAVANHTANGGNYSIVEEEKAWFRPTS 120

Query: 212 LEDSEKPH 220
           LEDSEKPH
Sbjct: 121 LEDSEKPH 128

[Close]
BLAST of Spg002378 vs. TAIR 10
Match: AT5G17165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03150.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 95.5 bits (236), Expect = 5.7e-20
Identity = 62/130 (47.69%), Postives = 80/130 (61.54%), Query Frame = 0 

Query: 92  MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPQFRRAAHTSAYDKNPDEQVRPS 151
           MAA S++   I  +G+ I N +      R+ A++      R   HTSAYDKN +E+++PS
Sbjct: 1   MAAKSKN---IQVVGRHIVNGV------RSRAVAYGLFTSRN-DHTSAYDKNVEEELQPS 60

Query: 152 IVPDEVIQAQAADKYWAPHPQTGVFGPTSDHPAAAAVNRAADGGNYSVGEEEKAWFRPTS 211
            VPDE+I+   +DKYW+PHPQTGVFGP+S    A    R   GG      EEKAWFRPTS
Sbjct: 61  QVPDEMIKPD-SDKYWSPHPQTGVFGPSSSSTNAKDEFR---GGQEDSVMEEKAWFRPTS 116

Query: 212 LEDSEKPHAS 222
           LED +K H S
Sbjct: 121 LEDLDKTHHS 116

[Close]
BLAST of Spg002378 vs. TAIR 10
Match: AT3G03150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.4 bits (228), Expect = 4.8e-19
Identity = 55/124 (44.35%), Postives = 74/124 (59.68%), Query Frame = 0 

Query: 96  SRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPQFRRAAHTSAYDKNPDEQVRPSIVPD 155
           S+S   I  L K + N           A +S+    RR+ H+SAYDKN ++++  S VPD
Sbjct: 6   SKSFQLITSLRKHLVN-----TRASTRATASALFPSRRSGHSSAYDKNVEDELHASAVPD 65

Query: 156 EVIQAQAADKYWAPHPQTGVFGPTSDHPAAAAVNRAADGGNYSVGEEEKAWFRPTSLEDS 215
           EVI+   +DKYW+PHP+TGVFGP++   +A A     D    +   EE AWFRPTSLEDS
Sbjct: 66  EVIKPD-SDKYWSPHPKTGVFGPSTTEHSATAEGAHQD----TAVLEETAWFRPTSLEDS 119

Query: 216 EKPH 220
           +K H
Sbjct: 126 DKTH 119

The following BLAST results are available for this feature:
BLAST of Spg002378 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038901450.12.9e-5889.84late embryogenesis abundant protein At5g17165-like [Benincasa hispida][more]
XP_008453829.11.5e-5488.46PREDICTED: uncharacterized protein LOC103494437 [Cucumis melo][more]
XP_004146886.17.3e-5486.26late embryogenesis abundant protein At5g17165 [Cucumis sativus] >KAE8649143.1 hy... [more]
XP_022140901.16.2e-5387.50late embryogenesis abundant protein At5g17165-like [Momordica charantia][more]
XP_022984594.16.2e-5383.59late embryogenesis abundant protein At5g17165-like [Cucurbita maxima][more]
BLAST of Spg002378 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4KFM88.0e-1947.69Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN... [more]
BLAST of Spg002378 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BYE57.2e-5588.46uncharacterized protein LOC103494437 OS=Cucumis melo OX=3656 GN=LOC103494437 PE=... [more]
A0A6J1JAZ83.0e-5383.59late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1CHE93.0e-5387.50late embryogenesis abundant protein At5g17165-like OS=Momordica charantia OX=367... [more]
A0A6J1FNH51.3e-5184.38late embryogenesis abundant protein At5g17165-like isoform X1 OS=Cucurbita mosch... [more]
A0A6J1E3E96.3e-5180.47late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662... [more]
BLAST of Spg002378 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G17165.15.7e-2047.69unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G03150.14.8e-1944.35unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..148
NoneNo IPR availablePANTHERPTHR35122:SF2OSJNBA0093F12.14 PROTEINcoord: 92..220
IPR039291Late embryogenesis abundant protein At5g17165-likePANTHERPTHR35122OSJNBA0093F12.14 PROTEINcoord: 92..220

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg002378.1Spg002378.1mRNA