Spg002358 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg002358
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ubiquitin conjugating enzyme E2
Location	scaffold6: 989119 .. 990946 (-)
RNA-Seq Expression	Spg002358
Synteny	Spg002358

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTCCCATCTCCTTCGTCGTTTCTCATCCTCATCCTCTCTTCTTCTTCTTCTTCTTCGTCTTCTTCACAAACCCTCACACCAGACTTGAACGAACGCCTTCACGACGACCTCTCTCTGGTACGATTTCCTTCTTTCTCTCTTTTGTTTTGCCTTCTGGATCTCCTTCTTTCTCTGTTCGCGCTCTGATCTGAGGTTTCGATTTGGATTCTGGATCTTTAAGATTTCTGTTAGCTTTTGTTCATGGCGTCGAAGAGGATCTTGAAGGAGCTCAAGGATTTGCAGAAGGACCCTCCTACATCATGTAGCGCTGGTATGAAATTCATTTCTTGCTTTAGATTGTTTTGATTGTCTTGAATTGATTGATCTTATTGTTTTCGTCGTTCTATTTTGCTGTGCTTGTTGATTATTGACTGTTCGTGGTTTTTTGTGCTGAGAATAATATATGCTGATATTTTTGTCTCAAGGAATTTTTTTGGGGAGGGTTTGTTGGCTGTAAATTGTTGGGGGTTTCTTTACCCAGCTGATAGGAGAATGATCGCGGATCATGTTAGCGTGGGTTTTGAAGAGGGAGGGAATTAAGTCAATGAATTCCTGATGTAAAATATATCAGAATTTGGTTCTATTGTGTGTCTGAGCAAATCAATTTTTCAAATTTTTGTATTGTTTCATCTTGAAGTTCCACTTCCTACCTTCCACTGCATTTGTTTCAGTGATATTATTTTATTATTATCTTTTTGGTAAGAAATTGAGCTTGAATGGAAAGGGTATTAAAAAAGAAAGCCCACCAAAGGAAACTCACAACTAACTATAGAAACGGCTTCCAATCCAAAAGAACAAGACTAAACTGATAATCACAAAAAGTTGGATGGATGAACACCAACAAGTAATTGTTGAACCTAACCACCTTCCAAACTTCGTTCCAAGGACTCTCCACTCCTCGAAAAATCCTATGGTTCCTCTTGAGCTAAATCCTCCACAGAACAGCAAAAGAATAGCATGCCACAAAATTCTGTCGTCCTGGAGAATTCAAGATCACCTCCTTGATCATGGAACCACAACCTCTATTGGGAGCTAATCAAAGGCCAAAAGAACTAAGGCACTGACTCCAAGTGGAATAGGAATAAGCAAACTGATAATCCCACATCGATGCCCTCTTTGTGTCTCTTGCAAAGAACACACCACAGTGGACACAGCAGCAAGGAGAAATTTTCGGTGTTATTATTATCCATGATGAGAAGAGATGATGTCTTTATTGTGATGTAAACTTTTATATAGAAGAAGTTTTGTGCACTTTAGCTTGGGATACTCGCATCTGGAACTAAAGTTTAGATATTTGAGATTGCAATTGTACTTATTTCTCCTTCACTGTAGATTTAACTTTGCTAATTAAGGTTGAAGTATTTAAGAACTTCTAACTCATGATAACCTTTAATTCTTCTTGCTTCTAGAACCGAAGTTAACATGTACATTGATTGATTGGACATGAATATCAAGGTGTTGGGTATGCTGTTTTGTTTCGCCCTTGTTGATAAATTTAGATCATATGCGTTTGCATGAGAAAGAAGACTGGGTTTAAGGAGCTACGCATATTTTCTCTAAGATTTATTGACTTCTTATTATATTCTATATGGTCTTAGTGATTAGAACCGTAGGTTTCATTGAGGTGCTGACTCATGTAAGAATTTCCTCAGGTCCAGTTGCCGAAGACATGTTTCATTGGCAAGCTACCATAATGGGTCCTCCAGACAGTCCTTATGCTGGGGGTGTTTTCCTCGTCACCATTCATTTTCCTCCGGATTACCCTTTTAAGCCTCCTAAGGTATAA

mRNA sequence

ATGGCGTCGAAGAGGATCTTGAAGGAGCTCAAGGATTTGCAGAAGGACCCTCCTACATCATGTAGCGCTGGTCCAGTTGCCGAAGACATGTTTCATTGGCAAGCTACCATAATGGGTCCTCCAGACAGTCCTTATGCTGGGGGTGTTTTCCTCGTCACCATTCATTTTCCTCCGGATTACCCTTTTAAGCCTCCTAAGGTATAA

Coding sequence (CDS)

ATGGCGTCGAAGAGGATCTTGAAGGAGCTCAAGGATTTGCAGAAGGACCCTCCTACATCATGTAGCGCTGGTCCAGTTGCCGAAGACATGTTTCATTGGCAAGCTACCATAATGGGTCCTCCAGACAGTCCTTATGCTGGGGGTGTTTTCCTCGTCACCATTCATTTTCCTCCGGATTACCCTTTTAAGCCTCCTAAGGTATAA

Protein sequence

MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKV

Homology

[Close]

BLAST of Spg002358 vs. NCBI nr
Match: RYR41682.1 (hypothetical protein Ahy_A08g038094 isoform A [Arachis hypogaea])

HSP 1 Score: 146.4 bits (368), Expect = 9.1e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 27 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 86

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 87 PFKPPKV 93

[Close]

BLAST of Spg002358 vs. NCBI nr
Match: XP_015571316.1 (ubiquitin-conjugating enzyme E2 10 [Ricinus communis])

HSP 1 Score: 146.4 bits (368), Expect = 9.1e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 61 PFKPPKV 67

[Close]

BLAST of Spg002358 vs. NCBI nr
Match: KAE9608908.1 (putative aminoacyltransferase, E1 ubiquitin-activating enzyme [Lupinus albus])

HSP 1 Score: 146.4 bits (368), Expect = 9.1e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 61 PFKPPKV 67

[Close]

BLAST of Spg002358 vs. NCBI nr
Match: TKS17383.1 (hypothetical protein D5086_0000014670 [Populus alba])

HSP 1 Score: 146.4 bits (368), Expect = 9.1e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 18 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 77

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 78 PFKPPKV 84

[Close]

BLAST of Spg002358 vs. NCBI nr
Match: GFY84111.1 (ubiquitin-conjugating enzyme 10 [Actinidia rufa])

HSP 1 Score: 146.4 bits (368), Expect = 9.1e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 61 PFKPPKV 67

[Close]

BLAST of Spg002358 vs. ExPASy Swiss-Prot
Match: Q8S919 (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=UBC5B PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.7e-33
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQAT+MGP DSPYAGGVFLVTIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 61 PFKPPKV 67

[Close]

BLAST of Spg002358 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.2e-33
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 61 PFKPPKV 67

[Close]

BLAST of Spg002358 vs. ExPASy Swiss-Prot
Match: P35132 (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.2e-33
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 61 PFKPPKV 67

[Close]

BLAST of Spg002358 vs. ExPASy Swiss-Prot
Match: P35133 (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.9e-33
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 61 PFKPPKV 67

[Close]

BLAST of Spg002358 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.9e-33
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLV+IHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 61 PFKPPKV 67

[Close]

BLAST of Spg002358 vs. ExPASy TrEMBL
Match: A0A1U8L7I4 (ubiquitin-conjugating enzyme E2-17 kDa OS=Gossypium hirsutum OX=3635 GN=LOC107924563 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.4e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 61 PFKPPKV 67

[Close]

BLAST of Spg002358 vs. ExPASy TrEMBL
Match: A0A1U8NQC1 (ubiquitin-conjugating enzyme E2-17 kDa-like OS=Gossypium hirsutum OX=3635 GN=LOC107950744 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.4e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 61 PFKPPKV 67

[Close]

BLAST of Spg002358 vs. ExPASy TrEMBL
Match: A0A059CHQ6 (UBC core domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_D01776 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.4e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 61 PFKPPKV 67

[Close]

BLAST of Spg002358 vs. ExPASy TrEMBL
Match: A0A6J1J9S3 (ubiquitin-conjugating enzyme E2 10 OS=Cucurbita maxima OX=3661 GN=LOC111483017 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.4e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 61 PFKPPKV 67

[Close]

BLAST of Spg002358 vs. ExPASy TrEMBL
Match: A0A059C1Y6 (UBC core domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E00833 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.4e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 61 PFKPPKV 67

[Close]

BLAST of Spg002358 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 142.1 bits (357), Expect = 1.6e-34
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 61 PFKPPKV 67

[Close]

BLAST of Spg002358 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 142.1 bits (357), Expect = 1.6e-34
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 61 PFKPPKV 67

[Close]

BLAST of Spg002358 vs. TAIR 10
Match: AT4G27960.1 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 142.1 bits (357), Expect = 1.6e-34
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 61 PFKPPKV 67

[Close]

BLAST of Spg002358 vs. TAIR 10
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 142.1 bits (357), Expect = 1.6e-34
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 31 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 91 PFKPPKV 97

[Close]

BLAST of Spg002358 vs. TAIR 10
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 141.7 bits (356), Expect = 2.1e-34
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
          MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDY
Sbjct: 1  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61 PFKPPKV 68
          PFKPPKV
Sbjct: 61 PFKPPKV 67

The following BLAST results are available for this feature:

BLAST of Spg002358 vs. NCBI nr


Match Name	E-value	Identity	Description
RYR41682.1	9.1e-32	100.00	hypothetical protein Ahy_A08g038094 isoform A [Arachis hypogaea]	[more]
XP_015571316.1	9.1e-32	100.00	ubiquitin-conjugating enzyme E2 10 [Ricinus communis]	[more]
KAE9608908.1	9.1e-32	100.00	putative aminoacyltransferase, E1 ubiquitin-activating enzyme [Lupinus albus]	[more]
TKS17383.1	9.1e-32	100.00	hypothetical protein D5086_0000014670 [Populus alba]	[more]
GFY84111.1	9.1e-32	100.00	ubiquitin-conjugating enzyme 10 [Actinidia rufa]	[more]

BLAST of Spg002358 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S919	1.7e-33	97.01	Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=U...	[more]
Q94F47	2.2e-33	97.01	Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1...	[more]
P35132	2.2e-33	97.01	SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1	[more]
P35133	2.9e-33	97.01	Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1...	[more]
P35135	2.9e-33	97.01	Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]

BLAST of Spg002358 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1U8L7I4	4.4e-32	100.00	ubiquitin-conjugating enzyme E2-17 kDa OS=Gossypium hirsutum OX=3635 GN=LOC10792...	[more]
A0A1U8NQC1	4.4e-32	100.00	ubiquitin-conjugating enzyme E2-17 kDa-like OS=Gossypium hirsutum OX=3635 GN=LOC...	[more]
A0A059CHQ6	4.4e-32	100.00	UBC core domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_D01...	[more]
A0A6J1J9S3	4.4e-32	100.00	ubiquitin-conjugating enzyme E2 10 OS=Cucurbita maxima OX=3661 GN=LOC111483017 P...	[more]
A0A059C1Y6	4.4e-32	100.00	UBC core domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E00...	[more]

BLAST of Spg002358 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64230.1	1.6e-34	97.01	ubiquitin-conjugating enzyme 28	[more]
AT1G64230.2	1.6e-34	97.01	ubiquitin-conjugating enzyme 28	[more]
AT4G27960.1	1.6e-34	97.01	ubiquitin conjugating enzyme 9	[more]
AT4G27960.2	1.6e-34	97.01	ubiquitin conjugating enzyme 9	[more]
AT5G53300.1	2.1e-34	97.01	ubiquitin-conjugating enzyme 10	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..67 e-value: 7.8E-31 score: 108.8
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 1..67
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 5..67 e-value: 1.9E-20 score: 72.9
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 1..67 score: 31.746338
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 3..67 e-value: 2.44701E-34 score: 111.525
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 3..67
None	No IPR available	PANTHER	PTHR24068:SF346	BNAA01G32320D PROTEIN	coord: 3..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg002358.1	Spg002358.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016746	acyltransferase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity