Spg002318 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg002318
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Locationscaffold1: 32291574 .. 32303941 (+)
RNA-Seq ExpressionSpg002318
SyntenySpg002318
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGAAATGCGCCCACAATTGGAGATAGAGGTTAGCGGAGCAAAGAGTAGAAGTTGCAGATTTGCACCCACATTTGATCCTGAGAATGTGGAATTTGCATTTGAATTGCGCCCGCAAACTGATGAGGAAAGTAGCCCCAACTAAAGACATAATTGCGCCTGCAAACTGATGTGGAATTTGTGTTTGAATTGCGCCCGCAAATTGTCAAGGTAGTGCATTAAAGATTTGCGCCCGACTTTGCAGCCCAACTGGGCTTTCCGACAGAATTCCGAGATTCGCGAGATCTTCACAGAATCATCCGAAAATCCCAAATCTCGTATCAAATCTCCAAGGATCGGGGATTTTCACCTTCTAAGGCTCTCACACACTGATCTCGGCAGCCAACCCTACCTTCCAAGGTCTATAAAAGACGACCAGGTGAAATAAGCAAGAGAGCTTGGAGTTTTTGTCCTTAGGATAGATTTTTAAGTTTTTCTCTTCTCACCTTGTACCCACTCCAAGTTTTGGATTTTCCAGCCTCTGTCGGCTCCTCTATTCGAAAGAAGTAGAGGAGAAAGGCGGCCCCTTGAAAGAGGACAAGAGCAAGCTAGATAGAGAGGGGAAAATCCATAGTTAGTCTTGTCTCTTACATTTTGTACTTTCTGTTCTTTTATTTCCAGCATCATTGTATTTACTCTTCTTTACTTCTCAATTGTGTACTCAAGTTTTTATTCAATATGAATTCAAGTTGTTCTTATATTTTGAGTTTGATTTCTTTTGTGCCTTGCACTTTATTTTCAATTATGAGCTAAGCTTCTACTTGGGGTTCAAATATGTGGATTCCTTGAGTAGAAGAAAACCCCACCTATGCAAAAGATACTTTGCTCCCTCTTAGCATTGTTTGTTCTTGATGAAAATTAAAGTTTATCGTTATCTTAAATTGGCCACTTAGATTAACATAGTTTGTATTTAGTTGATGGCCGAAAGGTTGGAATTGAATGTGTGGGTTCACAAGAACAGTAGTGGAAAAGATCCTAGAAATAGGACTGAAACCACTAGATTTTTAAGAGTCGTGAGTGTTAATCATCTAAGTTTCAACTAGCCCTAGAAATAGTGTAAACCCGAGACTTTCCTTGGGTCATTTCCTCTTGTCATCTATTGTGAAAGTTGGACTTAAGTTGTGTGGTTTCATTGTTGAAGGAAAATGGCAAGCTTTTAGTTCAAGTTGTTTTTTTTAACCTTGGAGTTTATTTAAAGAAAAGGAAAATGAAAGGAAAGGAAAAGAAGAAAAGAAAAGAAATGGGAATGGAAAGAAAACCAAAAAAAAAAAAAGAGAAGAAAAAGAAAAGAAAGTAAATGGGAAATGACAGCAAACCTTCCACCACCGCTTCACCCATTTTCAGCCTACTTCCAGCCACATTCCTCATCATTTTCCTTCCAAATTTCCAGAGAACTTGAGGGAGAGAGTGAAGGAAGAAGAAGAAGAAGAATTTCGTGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGAGTTCAACCTGTCAACCTCTGGTTTTTGATTCGGTTTGAGCTACACAGAATGAACTAAGAGGTGAGGTTTGATTTTCTTGAAAGTTCGTTCATTTTCTAACAAATTTCATGAAGTAATCTTGAGCTGAATCGTATGAGAAGTTAATGGTTTTTTAAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGGGGATCTCTGGTTTTCTCTGGTTTTTCGAGCATTCTGGGGTGTACAACTTGAATCCGAAGCTCTATTTGGTATGGTTGGAAAGCTTATTCAATTTACTACAACCTTAATGAAGAATCCATGAGCCAAAAATGACTTGAAGTAGGTTTAATGTCAGGAGAAAGATAAAGGGTAGCAGAGAAGCTCAAATCTGTGTTGTCTGTGTTCGGGGCGTTTCTGGGAAACTTGGTTGTGAATCTCGTTTTCGTTTCTTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTGTATTACATTAATTTTGGTTAAGTATTGAGGACGTTATGGGTATTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAAAGTAGAATGTGAATGTGATTCTTAATTCAATTGTTTAGAAATTCATGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTGGTTGTTTGACAAGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGAAACTAGCTAAGACTGTGAGTGACAAAATGAATTTCGAAAATTGTTTCCAACGGTTGTTCATGTTTTGACGTTTTATATGCTTTTCTATGAATGATACATGATTTCTATGAACGGTTTCAAGCATAAGTTTTGAGCTTAGATTTTCTAATGAGGTTTATATACGAGCACGTGGTTAATGACTTTATGACAAGTAGTTGAAACGATATCTTTTAAAGTAAAGTATGTATTAGCAACTATTTTTTTGAAAGATTTTCAGTTTTTTCCACGAGCAAGCTGAATAAGCTTGAGTTTTACGAGAGATAACGATAAGCAGGCATGTTCTAATGTTTTCATGGGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACATGTTATATTTCGTTGTTGATGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAACGTTTGATGTACTTGATATGCCTTGCTAGATTTTTAATGATGAACCTGCGATGTTTTTGAGAAAGCTTTTATCATAGCACGTTTATGTTTAACGCCTTGGTTGAGCTTCTTTATACGTTTAAAGTTTTATCACGTGTTCTGATTTCCGAATGTACAGTCTTAAATTTAGTCACTCACTAGGCTTCGTAGCTCATTCTTTCAAAATGTTTTTCCACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCAAGAACAAGCTCCAGTATGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTAAGGATTGGATAATATAGTCCTAGAGGTCGTGGTTGTATAAACCCTAGTTGTATATGTTTTTGGTTGTGATATCTATATCAGGTTATTATTCGAACCAAGTTGTGTCAGGGCGGCACCTCGTGTTTGCTAAAAGTGTTTTCAGGGATTCCGCTGTGTTGTGTTTCATGTAGAATGTTTCATATCTGGGATTAGTATGTTTATCAGGTTCAACGTTCCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCAGACTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACAAATAGATGTCTTGTTGGCTTAGTCTTCTAAAGGCACCTACAGAGGAGCTGAATAGAAGTAGGACTTAACTCACAATCTAGTTGTCAGGGCTATTGCGGGCTCAACTGAGGGGTGCTATTTGCACCATGTCTATGTGGGCAACATAGATAGCATTTCTTAGACGGCTGTAACGCCTGAGTAATTTGCGGGCGCATAGGTGGGCGCAATCTGATGCTTAAAGTTGATTTGAATTCCCCCGTTTATCTCATATAGTTTATCTGTTTTCATTACTTGTTTATTTTACTTTTGTCTTAAACCAAAACCATCTTCAAAATATTTCTTTGGTTACCATATCCGTGGTTGCAAATTTAGAGGAGGTTCCCGTTTTTACAGAATCTTGTGTTTACTCAACTAGTCACCATCTCCCCTTGGGTACGATGTCCGAAATAATTTCCACTTTATTACTTGATAGTGTATACTTGCACTCGAGCAGGTGTTGCACATTAGCAGCACGTCACTCGTCAGTAACACAGGGGTAAAACGGTGATTTGACCCAACTGTGGTTACAAACACTCGTGAAGGATTGACTTACCGGTATAGGTCTATATCCATGGGCACATAAATGTTCTATAGTGAGAAGAGTTTAGATGTGGGTCTTTGGTGGAATGACCCACAGTTAATGAATATTGGTTAACTCGATTAATGAGTTTAGTCAGTTAACCTCATATCATTGGAGCTTCTGATCTGTAGGTTCATTAGGTCCCCCTGTTAGCTTGTAAAGAGTAATTAGGAACAATTATATCTTGACAGAATTTGAATAGTTCAAATTCATAATGGGAATCAATTTAATTGTATGAGATACAATTAATATAATGTATAGTGATACATTATAATATAAAGTCTAATTTGAGATTAAACTTTATTGAGAGAATGATATATTTGAAAGAGTTCAAATATACGACTAATTAAATGTATGATATTTAATTAGAAGATGAATGAATTAATTATTCAATTGATTTTAAATTAAATGTGATTTAATTAAACTATAGTACATGAGAGGATTATTAGAATATGATTCTAATATGTAATTAATTAAATATGGGAGATATTTAATTAACTATAAAATTAATTAATTAATTGATTAGTTTAATTGAACTAATTAAATGTGATTTAATTAAGTTTAATTAAGGGTCCGTTTGGAATACATTTTAATTTAAATGTTTTTCAAGAATGCATTATTTAAAAAACATTTTGTATAAAAATTGTTTAGAATTTAAACACTCATATGTTTGGTTGCATTTGTTCATAGGTGTTTTTATACATAAGTTATTGTATACCCAAAGACTTTTTTTTAAAAAGTTGGTTTCAAGTGTTTCTCTCAAAATGGTTTATTTATCAAGCTCATTTTCTAATAAGTCATTTTTAGTGGTTGCCAAACACTAGAAATTTTTTCAAAATGATTTTTTCTCAAAATTAAACACTTGAAAAGTTAAACCAAACACACCCTAAAACTATTATGTGAGGGCATTGCATTTAAATATGATTTAAATGTGCATGAGGTTAATTAATTAATATGATTAATTAATTAATTAATTAAATTTTATATTATTTAATTAATTAATTTTTTGATGTAACGGTCTAGATCTTTTCCCTAACCTCACATTAGGGTTTCCTCACTTATAAAAGGAAAGGTTATGGAACCCTAACCCTAAGGTCTCATTCTAGTTTCCCTCTCATATTCTCTCAACTCAAGAACACAAAGGGAGAATTTTCTCTCTAGAGTTTTTTCCCATTCAAGATTAGGTAGTCCCACAACTACGTTCCTAATCTCAGAGTCATAGTGGGGAAGATCAATTGGTGGTGCCCAAATTGTTGACGCTTGGTCCCTATGAAATCAAGAAAGACATTCTTGATATTTTAGAGACAACAACGACGGTATGTATGTGTTGGGTTTTATGCCCTAAAACTCGTGGATAGTAAATGTAAACATTAGACCGAACATTAATAAAATGATATTACATGTATTATTCATTTATTATTGTGTATTGGGTATATCTTGCCTAAATAACCCTAATCCAATAAATTGAACATCCTAGGCTGTTAGTATGAGACTTGAACTAGTATGTGGGGACACACGGGGATCGCTGTTCAAGTTACAGCCTAAAGGGTCTATAGAATAGGGATAAGGCTGGGTACCTAATCCTAGTGACACTATGGATACGATCCACTTTGTATTATGATACAAACGCAATGATCCAATGCGTTCGTGTAGGGGACATGCGAGTGGGGGTATCCTGTGCAATGAGTTTGCATAAGACCGGATCGCGAAATAGTAAACCACTAGTTGTAACACCGTTAATTAGATAGGTTTCTATTTCACTAGGATGACCTATGCAACTTAGTCTCAATCCTGAGTGGATTATGGACTCCTGCTCACGAGGGATTGGCCTTTCATTTGTATGGGTGAGAGTGGCCTGCACGCCGACTCAATAAGCCTACCATTTTGGAGACAAAACAGAGTGGGGAGCTGGGAACATAATGACACAAGATGAAATTCACTCCTTCCCAACATTAGGGTAAGTAGAGGTGTGTTCTCTTAAGTGGTGTATTCGGGTCTTGAACAATGGGCCCTGCCCTCTCTATAGCACGAGAAGGACTCTTGTTTGTAGGTTGGACCTTAAACAGGTTGTTCATTAAAGGAGCACTGGGACTTAAGGATGTAGAGGTAACCTAGGGGTAAAACAGTAATTTGACCCAGCTGGTGTTACGAACACACGTGAAGGACTGACTTGCTCTTATTGGTCAATATCCGTGGACACAGAAATATATCTGCAGTGAGAAGAGTGCATCTGTGGTTCTATAGTAGAGTGAACCACAGTTAACGAATATTGATTAACTTGGTTAATGAGTTTAGCCAATTAATCTCATATCGTTGGAGCTTTTGATCTGTAGGTCCATTAGGTCACACCGGTAGCTCGTATAAGGTGTTGAGGTAAATTTACTAAGGAAAATTAATATGAATTGGATTATTAAAACTATAGGTTAAAATTAATGCGCATTGGATGTACATTAATACTATAGTTCATATGAGAGAAAAATAATTGAATATGTGATATTCAATTTTATGATTAATTAATTTTAGAATTAATTAATTAAAAGTTTTAATTTAGTTTAATTAATTAACATTAAAACTATAGGGTAAAAAGAAGGAAGTTCATTTAAATGAATAAACTAATTTAAATATGATTTAAATTGGTTGGTGTTAATTTAATTAATATTATTAATTAAATTAAAAATTAATTTTGGTTTTAATTTTTTAAAATCAAAATTATTAGGTAACTGACTAATCAGTTACCTGAACGTGGGGCATTAGTTATGCACGCCTCTCCCTCTTCCTGTCGATAAGCAAAAAGGTTGTTTTGCTCTCTCACACGCTCTCATTCTCGATTTGGGTAATCATAGAAAAGCTTCAGAGATTTTTTCTCCCTTCCCAAACCCTTAGTACGTTTTGGTTTCCACAAGCCTCTTAACAAAAGGCCTTAGGAATCATACCGGTGTCATCCTGTGGTGGTGTTTCGTGGAGGATTTTCCAACGTAGAGAAGGTTCTGTAGCTGCTGTGATTTTCAGCAAATCCCCAGAGAAAAGACGTTTTCGGTCAAGACTTCAAGCATTAGTAAGTTCCCTTTGTCCCTATGATCTCTAGGATCATTCTCTAGAGTATATCTAAGTTTTTTATTGAAAAAAAAATGTTTTATAACCATATTTACAGCTTTTAATATGTGTTTTATTGCTGTAATTTATTTGTCGTCATATCAGTACTCCGATCGTAATTTAATTTTAGATTAGTCCTCTGATTGTTTCCGCTACGTAAGGGTTTTAATCCCTATAATTGGTATCAGATCCATCTCAAATTTTAAATTTCAATTTGGAATTTACAATTGGCTTGATTGGTGGGATTTAAATTGCATTATGAATGTATGGTTTGGGTATAAATATTTTTGATTTATTGGCCTTAGATTTACTGTTTTTTTTTAATTGTTCAATGTAAAGGCCCTTGCGTTTTTAGGCATTAAATGTAAATCGATTGTCCTCTGTAAGTTTGGGTCTGTAATAAGTTTTTTGGTGATGAAGATCGATCAAAATCGCAGCTATTCGAGGAAAAATTGCAGATGAAATAGTGCTGGAATTTGCCCAGAATCGTGCCCAGATGCATCAGCGTCACGACGCCGCCTTCACAGTTGCGCGCGGTTCAAGCTGACGCGATTTCACGTGGTGTACGTTAGGGTTCCAGTTGCGTGCGGTTCAAGTTGGAAACGTGGTCCGGTTCGGGGGTTTGGTTGGTCTGGGGCTGGTTTGGCTCAGTCCAACCAATTTTGGGATTGGTTTGACTCATTGGAGACCGGTTTGAAGCGATTCGGGTCGGTTCGTGAGGTCTGGTCCGATTCTGAAGCTGCAGAAGGATAATTTAGGATAAAATAGCTTGAATTAATGTAATTTAAATGCTTTATTTTATCCTAGGGGCCAATTTATTGGTGTATACGCTATTTAATATGCTTTATGGATGTCATATTAGAAATCTCATCTTAGGTTATAAAGCATGCTCATGCATTTTATATATGTTATAATTAGATTATAATGTATGGATGAAAATGCATGTATGATTTTCATGGAATATTTAATGTATGTGAGTTATATTAAATACATGAAAATGATTAAGCACGATGCATACAATTACTTAGTTAAATATAAAAAGTTATATTTAAAATGTTGTTTGCAGCATGCTTGTATGATTTTCTTGATTGACAATAATATAATAGTTATAGTTATTAACAAGAAAGTCTAAGTTGCATTGAGCATGCCACATCCATAGGTTAATATAATGGTTATATTAATTTCATGCAATGCAAAATATATAGTTTAATTAATTAACTGGAATATGATTGTTAATTGCTTTAAACTATAGTATGCATGATTATAGGACTAATCATTAAAATTTAAATAGTTTAAAATTAATGATTAGAAACAGTCAATCTATAATCAAGTGATGCATGCACACATAGGACCATAGGTTAAATCAATTAGTTTTAATGAGTTAAAATTAATTAGACCTAAGGTCACATTCTAATAGGATTAGAATAATTTCTTACTTAGTTTTAAAATAGTTTTAATCAACTAAGTAGGACAAACATTACTATGATTATAAGGGAACTCTACCGGTGATGTTCTGTCTAAGGTTGGGGGTATTTAAGTTGACGGTTTACGGAACACCTCCTACCTGGGAACTAACCCGGAACACCAGAGTTGAATTAATCATAGTTTAATGTTAGATTATGGTCACTAGGTTAATTAAATGTGTTTAATTCACCTAGAAACTAGATTAAAATCTTATTATAAGAGTTATAATAGGATTAGACTTAGATAGATTGACTTAGCCAGATTTATCTAAGTTAATAAACCCTAAAATGTACGCAAGGTCACTTTAGTGGGAGGAAAATTACAAAACTCGATTTAAATCAAGTTTTGCTCCTACGTCCCTATATTCACAATGTGAGATCCATGCTCGGCTTCGTGTCGCTTTAAGCGCGACCTCCCTTCGAAAAAGTGTTTGCATGGGTCAATAACAAGGTGAATGGGGAAAGTGTCCATAGTAAGTGAAAGCAGGACACGTGTCAACGTATCCCTCGGTTTCCACCCCTAGGTCACAACGTGAGAGTTTATGATCCGACTGCGTGTTGCCCTGGAGTAACTGATAAGGGTAAAAAATATACCTATTTTACCCTTATATTTAGCTCATTCCTTGGTCAAATATTGAGTGTTTAGGTCAATTTTACTATTTCCGAGCTCAAAATATGATAATTTGATAAGTTAGGGTGTTGAGAGTCACTTTTGTTGAATTATGCTTATTTGTGCTTAAAAAGACTTGATTTGTAGCAAATTTGACTTAGTTTGTTGCTGTGCAGAAAAACAGAGTTGAAGCTGGAATTTCCCAGAAATGCGACCGCATTTTTGGGAAGGCAAAATGGAAATGCGACCGCATTTCTGGGAAGGCAAAATGGAAATGCGACCGCATTTCTGGAAAAACAGAGGTCGTTCCGTATCGCACGCGAGTCATTGTTGACGAGTCTTCTTCGCACCTAACCGGTTGTTTTGACCCCGAAACTGACTGGGCAACCTTCCAGCACCTATTTCGCAACTCCTCAACCAATTTCTACACTATATAAGCTCGGGATTCGAAGTCAAATTCAAGCAGAACTCACTTGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGACGCCAATGAGTAAGGATGCCCGAGGTCCTTCTTAGATGACAAATTCTAACCTGAGATAGAGAGTTAGACATCAAACCTTGTGGTTTGTAGAGAGTTTCACCCATTCCCATCTTGTAAAAGTGAGAGAGTGGAGTGTCTTAGCGAACTCTAGAAGGATTGTGTAAACAAAAAACTCATAATATTTAGCTACCTCTTTTAATTCCAGCTCTTGAGTCTTTTCATTATCTTGTATTCTTTTCATCATTATTCCAATGGAAATGTGTTGATTTGCTTTTTATCCCATCATCAGTAGCTAAATCCCGTTGAGGGGTTCAATGTGGTGAATTCCCTTAGGGTTTAATGGCTTGAAAGTGTTTTATTCGCTTATGTAAGGTTTAATGCATGTCATTCTTTATTGAATATCATTCTGATCTTGCTGAGTTTAATTTGATCACTTAGACTTTGCATGCCATGTGAGTTTGATCTCGAAAGGGACAAACGATATCGGTTCTCATAAAGGTGATATAGGAGAAAAAGCTCGAAAGAGATTGTTCGGCGGTATAGGGCAAGCTGCCTAAGGCACCCTATATCGACTATAGGGTTATAGGTTGCATTCGTGAATTATCTATGTCGGAGTCGAGTCACAGAAATGTGCATAACGGTACTCGCTTAGCCTTCTTACGGTTTTTGGAAACAAGGGCCAAATGGAAGTTAAATCTAACCCAATGCATTAAACACTCTTAAGTTAGATATTGCATAAGTAGGGTTGTTACCCTAGGGATGAATCCATGTTGAATACCTCGTTTTATTTCATTGTTATTCTTTATTGTTTTATTGCTAGTTTGTCTGACGTGCTTGCCAAGAATTTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGTACATTTGACCGAACATTAATAAAAGTGATGTATTATTCAATGTTTGTATTATATCTTGTCTTATCAACCCTAATCCAATAAACTAAACATCCAAGGCTAATAGAATGAGACTTGAACTAGTATGTACGGACATATGGGGATCGATCTTCAAGTTTTAGCCTAAAGGGTCTGTAGTATAGGGATAAGGCTGGGTACCTTATCCTGGTGACACTATGGATACGGCTCGCTTTGTATGTTGATACAAACGTAATGATCCAATGCGTTCATGTAGTTGACATGCGAGTGGGGGTATCCTGTGCAATGAGTTTGCACAAAGACCGGACCGCGAAATAGTTAACCACTAACTGTAACATCGTTAGTTAGCTCGGTTTCTATTTCACTAGGATGACCTAGGCAACTTGGCCTTAATCCTGAGTGGATTATGGACTCCTGTCCATGAGGCATTGTCCTTTGAATTGTACGGGTGAGAGTGGCCTGTTCGCCGACTCAATAAGCCTACCATTTTGGGGACAAGACCGAGTGGGGAGCTGGGAATATAGTCTTACAAGATGGAATTCACTCCTTCCCAACTTTAGGGTAAGTAGAGGTGTGTTCCCTTGAGTGGTGTCTTCGGGTCTTGAACAATGGGCCCTACCCTCTTTATGGCACGAGAGGGACTTCTGTTTGATGGTTGGACCTCAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGACCAAGAGGTTGCCTAGGGGTAGAACGATAAATTGACCTAGCTGGGGTACGAACACACGTGAAGGGCTAACTTGCTGTTGACCGTTGATATTCGTGGACACAGAAATATATCTGCAGTGAGAATAGTGCAGTTGTGGTTCTATAGTGGAGTGAACCACAGTTAACGAATATTGATTAACTTGGTTAACGAGTTTAGCCAATTAATCTCATATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCCACCGGTAGCTCACTAAGGGCGTTGAGGTAAATTTCTATGGGATAATTGAATATTCGAATGAGTTCGAATATTACATTATAATATGAATTTGATTCATATTAAAACTATAGGTTATAATTAATGTGCATTAGATGTACATTAATACCATAGTTTATATGAGAGAGGAATATAATTAAATATGTGATATTTAATCATAACATTAATTAATTAGAGAATTAATTAATTATTGTTTTAATTTAGTCTAATTAAATTTGATTTAAATAAACTACATTAAAACTATAGGTTATGTGGTTCATTTTATGTAAAATTGTTTTATATAAAAGTGGTTAAATTAAATGTTAATTTAAATTCAATTAAATTAATTAATAATTTGATTATTAATTTAATTTAATTTATTATCAGTTATCTCAACGGATAAAGTCTTGCCCACTAACCTAAAATACTGCGTGGTTGAGAGAGTTTTAAGGGAGTTTTTTCGTGACTCATTAACTCTGTAAGGCTGTGATTAACCAATCTCTCTCCCTCTCACATTGATTCACGCATAGGTCTCCTCTCAATTACTGTATTCTTGTGCAAATTCTCTCTAGAATACAGAGTGAAAAATATCCCAAGTGAAATTGCCTTGTTCCCACAAGCAACAACGCTTAACTCCTTGTGAGAATACTGGTGAAGATTTGTGGTTGTGTCCTCCCAAAATCAGCGAGATCAAGCCTCGAAGGTTGCTGTTTTCCTGAAAATTCGTGAGGGAAAAGGCGAAACTAGTCAAGAACGTCTTCATAGTAAGGTTTCTTGA

mRNA sequence

ATGGTGGAAATGCGCCCACAATTGGAGATAGAGGTTAGCGGAGCAAAGAGTAGAAGTTGCAGATTTGCACCCACATTTGATCCTGAGAATGTGGAATTTGCATTTGAATTGCGCCCGCAAACTGATGAGGAAACCCAACTGGGCTTTCCGACAGAATTCCGAGATTCGCGAGATCTTCACAGAATCATCCGAAAATCCCAAATCTCAGCACAGGATTTTCGAGCAAAGCAGGGGGATCTCTGGTTTTCTCTGGTTTTTCGAGCATTCTGGGGTGTACAACTTGAATCCGAAGCTCTATTTGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTGGTTGTTTGACAAGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGAAACTAGCTAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCAAGAACAAGCTCCAGTTCAACGTTCCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCAGACTAAGCTAGCAGGTGGTCCGGGAGGGGGTCCATTAGGTCACACCGGTAGCTCGTATAAGGTGTTGAGGATTTTCCAACGTAGAGAAGGTTCTGTAGCTGCTGTGATTTTCAGCAAATCCCCAGAGAAAAGACGTTTTCGGTCAAGACTTCAAGCATTAGCCCTTGCGTTTTTAGGCATTAAATGTAAATCGATTGTCCTCTAA

Coding sequence (CDS)

ATGGTGGAAATGCGCCCACAATTGGAGATAGAGGTTAGCGGAGCAAAGAGTAGAAGTTGCAGATTTGCACCCACATTTGATCCTGAGAATGTGGAATTTGCATTTGAATTGCGCCCGCAAACTGATGAGGAAACCCAACTGGGCTTTCCGACAGAATTCCGAGATTCGCGAGATCTTCACAGAATCATCCGAAAATCCCAAATCTCAGCACAGGATTTTCGAGCAAAGCAGGGGGATCTCTGGTTTTCTCTGGTTTTTCGAGCATTCTGGGGTGTACAACTTGAATCCGAAGCTCTATTTGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTGGTTGTTTGACAAGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGAAACTAGCTAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCAAGAACAAGCTCCAGTTCAACGTTCCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCAGACTAAGCTAGCAGGTGGTCCGGGAGGGGGTCCATTAGGTCACACCGGTAGCTCGTATAAGGTGTTGAGGATTTTCCAACGTAGAGAAGGTTCTGTAGCTGCTGTGATTTTCAGCAAATCCCCAGAGAAAAGACGTTTTCGGTCAAGACTTCAAGCATTAGCCCTTGCGTTTTTAGGCATTAAATGTAAATCGATTGTCCTCTAA

Protein sequence

MVEMRPQLEIEVSGAKSRSCRFAPTFDPENVEFAFELRPQTDEETQLGFPTEFRDSRDLHRIIRKSQISAQDFRAKQGDLWFSLVFRAFWGVQLESEALFAWKDKAIYGSNARFWLFDKPRGNRSSLQTRKLAKTVEIELPVPDTLPTSAESSRTSSSSTFQEGQRVSLEEDDVRWLHAIFQTKLAGGPGGGPLGHTGSSYKVLRIFQRREGSVAAVIFSKSPEKRRFRSRLQALALAFLGIKCKSIVL
Homology
[Close]
BLAST of Spg002318 vs. NCBI nr
Match: KAA0060199.1 (uncharacterized protein E6C27_scaffold386G00120 [Cucumis melo var. makuwa] >TYJ95571.1 uncharacterized protein E5676_scaffold767G00770 [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 3.5e-12
Identity = 52/103 (50.49%), Postives = 62/103 (60.19%), Query Frame = 0 

Query: 107 IYGSNARFWLFDKPRGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTS 166
           ++ SN + +L  +PRGNR SLQT KL KT                 VEIELPVPDTLPTS
Sbjct: 43  MHKSNQKLYLV-RPRGNRPSLQTGKLDKTVIFSLSTLSVLRDNDAVVEIELPVPDTLPTS 102

Query: 167 AESSRTSSSSTFQEGQRVSLEEDDVRWLHAIFQTKLAGGPGGG 193
           AES  ++S ST        +  DDV WLHA+F+ K AGGPGGG
Sbjct: 103 AESFESNSRST------GIVRGDDVCWLHAVFRAKTAGGPGGG 138

[Close]
BLAST of Spg002318 vs. NCBI nr
Match: KAA0052218.1 (uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK01785.1 uncharacterized protein E5676_scaffold113G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-11
Identity = 47/99 (47.47%), Postives = 56/99 (56.57%), Query Frame = 0 

Query: 120 PRGNRSSLQTRKLAKTVEIELPVPDTLPTSAESSRTSSSSTFQ----------------- 179
           PRGNR +L T KL KTVEIELPVPDTLPTSAESS+++SS+  +                 
Sbjct: 79  PRGNRPNLHTGKLDKTVEIELPVPDTLPTSAESSKSNSSTWLELYFESVHVEMLFYKPSD 138

Query: 180 ---------EGQRVSLEEDDVRWLHAIFQTKLAGGPGGG 193
                    EG    +  DD+ WLHA+F  K AG PGGG
Sbjct: 139 VRVASYVCWEGSAGIVRGDDLCWLHAVFWAKTAGSPGGG 177

[Close]
BLAST of Spg002318 vs. NCBI nr
Match: KAA0042035.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 3.3e-10
Identity = 48/100 (48.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 120 PRGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRTSSSSTFQ 179
           PRGNR SLQT +L KT                 VEIELP+PDTLPTSAESS ++SS+  +
Sbjct: 123 PRGNRPSLQTGELDKTVIFSLSTLSVLRDNDTVVEIELPMPDTLPTSAESSESNSSTLLE 182

Query: 180 ---EGQRVS-------LEEDDVRWLHAIFQTKLAGGPGGG 193
              E   V        +  DDV WLHA+F+ K  GGPGGG
Sbjct: 183 LYFESVHVEMFGSVGIIRGDDVCWLHAVFRAKTTGGPGGG 222

[Close]
BLAST of Spg002318 vs. NCBI nr
Match: TYK17971.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 3.3e-10
Identity = 48/100 (48.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 120 PRGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRTSSSSTFQ 179
           PRGNR SLQT +L KT                 VEIELP+PDTLPTSAESS ++SS+  +
Sbjct: 123 PRGNRPSLQTGELDKTVIFSLSTLSVLRDNDTVVEIELPMPDTLPTSAESSESNSSTLLE 182

Query: 180 ---EGQRVS-------LEEDDVRWLHAIFQTKLAGGPGGG 193
              E   V        +  DDV WLHA+F+ K  GGPGGG
Sbjct: 183 LYFESVHVEMFGSVGIIRGDDVCWLHAVFRAKTTGGPGGG 222

[Close]
BLAST of Spg002318 vs. NCBI nr
Match: KAA0067117.1 (hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa] >TYJ97479.1 hypothetical protein E5676_scaffold598G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-09
Identity = 49/118 (41.53%), Postives = 59/118 (50.00%), Query Frame = 0 

Query: 118 DKPRGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRTSSSST 177
           + PRGNRSSLQT +L KT                 VEIELPVPDTLPTSAES  ++SS+ 
Sbjct: 93  EMPRGNRSSLQTGELDKTVIFLLSTLSVLYDNNAVVEIELPVPDTLPTSAESFGSNSSTW 152

Query: 178 FQ--------------------------EGQRVSLEEDDVRWLHAIFQTKLAGGPGGG 193
            +                          EG    +  DDV WLH +F+ K+AGGPGGG
Sbjct: 153 LELYFEFVHVEMLFYKPSDVRAASYVCWEGSAGIVRGDDVCWLHTVFRAKIAGGPGGG 210

[Close]
BLAST of Spg002318 vs. ExPASy TrEMBL
Match: A0A5D3BAD1 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00770 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.7e-12
Identity = 52/103 (50.49%), Postives = 62/103 (60.19%), Query Frame = 0 

Query: 107 IYGSNARFWLFDKPRGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTS 166
           ++ SN + +L  +PRGNR SLQT KL KT                 VEIELPVPDTLPTS
Sbjct: 43  MHKSNQKLYLV-RPRGNRPSLQTGKLDKTVIFSLSTLSVLRDNDAVVEIELPVPDTLPTS 102

Query: 167 AESSRTSSSSTFQEGQRVSLEEDDVRWLHAIFQTKLAGGPGGG 193
           AES  ++S ST        +  DDV WLHA+F+ K AGGPGGG
Sbjct: 103 AESFESNSRST------GIVRGDDVCWLHAVFRAKTAGGPGGG 138

[Close]
BLAST of Spg002318 vs. ExPASy TrEMBL
Match: A0A5A7UAH6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00130 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 6.5e-12
Identity = 47/99 (47.47%), Postives = 56/99 (56.57%), Query Frame = 0 

Query: 120 PRGNRSSLQTRKLAKTVEIELPVPDTLPTSAESSRTSSSSTFQ----------------- 179
           PRGNR +L T KL KTVEIELPVPDTLPTSAESS+++SS+  +                 
Sbjct: 79  PRGNRPNLHTGKLDKTVEIELPVPDTLPTSAESSKSNSSTWLELYFESVHVEMLFYKPSD 138

Query: 180 ---------EGQRVSLEEDDVRWLHAIFQTKLAGGPGGG 193
                    EG    +  DD+ WLHA+F  K AG PGGG
Sbjct: 139 VRVASYVCWEGSAGIVRGDDLCWLHAVFWAKTAGSPGGG 177

[Close]
BLAST of Spg002318 vs. ExPASy TrEMBL
Match: A0A5A7TKT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G004880 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-10
Identity = 48/100 (48.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 120 PRGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRTSSSSTFQ 179
           PRGNR SLQT +L KT                 VEIELP+PDTLPTSAESS ++SS+  +
Sbjct: 123 PRGNRPSLQTGELDKTVIFSLSTLSVLRDNDTVVEIELPMPDTLPTSAESSESNSSTLLE 182

Query: 180 ---EGQRVS-------LEEDDVRWLHAIFQTKLAGGPGGG 193
              E   V        +  DDV WLHA+F+ K  GGPGGG
Sbjct: 183 LYFESVHVEMFGSVGIIRGDDVCWLHAVFRAKTTGGPGGG 222

[Close]
BLAST of Spg002318 vs. ExPASy TrEMBL
Match: A0A5D3D150 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002770 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-10
Identity = 48/100 (48.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 120 PRGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRTSSSSTFQ 179
           PRGNR SLQT +L KT                 VEIELP+PDTLPTSAESS ++SS+  +
Sbjct: 123 PRGNRPSLQTGELDKTVIFSLSTLSVLRDNDTVVEIELPMPDTLPTSAESSESNSSTLLE 182

Query: 180 ---EGQRVS-------LEEDDVRWLHAIFQTKLAGGPGGG 193
              E   V        +  DDV WLHA+F+ K  GGPGGG
Sbjct: 183 LYFESVHVEMFGSVGIIRGDDVCWLHAVFRAKTTGGPGGG 222

[Close]
BLAST of Spg002318 vs. ExPASy TrEMBL
Match: A0A5A7VIY9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold598G00400 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 6.0e-10
Identity = 49/118 (41.53%), Postives = 59/118 (50.00%), Query Frame = 0 

Query: 118 DKPRGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRTSSSST 177
           + PRGNRSSLQT +L KT                 VEIELPVPDTLPTSAES  ++SS+ 
Sbjct: 93  EMPRGNRSSLQTGELDKTVIFLLSTLSVLYDNNAVVEIELPVPDTLPTSAESFGSNSSTW 152

Query: 178 FQ--------------------------EGQRVSLEEDDVRWLHAIFQTKLAGGPGGG 193
            +                          EG    +  DDV WLH +F+ K+AGGPGGG
Sbjct: 153 LELYFEFVHVEMLFYKPSDVRAASYVCWEGSAGIVRGDDVCWLHTVFRAKIAGGPGGG 210

The following BLAST results are available for this feature:
BLAST of Spg002318 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0060199.13.5e-1250.49uncharacterized protein E6C27_scaffold386G00120 [Cucumis melo var. makuwa] >TYJ9... [more]
KAA0052218.11.3e-1147.47uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK0... [more]
KAA0042035.13.3e-1048.00DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
TYK17971.13.3e-1048.00DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0067117.11.2e-0941.53hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa] >TYJ9747... [more]
BLAST of Spg002318 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg002318 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BAD11.7e-1250.49Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7UAH66.5e-1247.47CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5A7TKT01.6e-1048.00Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67... [more]
A0A5D3D1501.6e-1048.00Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30... [more]
A0A5A7VIY96.0e-1041.53Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Spg002318 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..165

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg002318.1Spg002318.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090304 nucleic acid metabolic process
molecular_function GO:0016740 transferase activity