Spg002280 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAAGATCAACTAACCCCGCCTTTTACTTTCCTTGCATTTAATTTTTCATATTTATTTTCCCGCCCTTATTTTATGTCTTAATCTTTCATCGATAAACCCCCCTTTTTTGGTTACCTCAAAAACACAAAAGAATTTAGAAATAAACCAATTGTTCCCTGTGATCGACCCCGACCACTACTACTACAAGTTAGCTTTAGGAATCATGAATTATAAATTTATTTGACACGACCCTCGACAAGTCGTCCGTCACGTTTCAAGCAATATATTTTACAAAATCTACGAAAAAACATATACGAGACAAAATTGAAAAGGATCGTTCGATGCAGGTCGATACGCCTTATTTGAGTATGCAACATTTTTTAATATCCTAATATTTGTATAAATCTTCTTTTTCAGGTTAATCTGGTGGACAATGTGCAATTCCAGGTAATATATGGTATCAGTCAACATGATGTTCATTTAACTGCCAGAAGATGCAGTTGTAGAATTTGGGACATTTTGCAGATACCATGTTCTCCTGCATGCACTGTTTTGACTTCAAAGCACTTTCCTATTAAGGAGTATATATCACATTACTACTTGAATATGACTTTGTGTTCAATATACAATGGTTTAATCCATCCATTAGGCAACGAGTCTAGCTGGCATATCCCCGAGGAGGTCAAGAATATTTTAGTTCTCCCTCCCAACGTTAAGCGTTCTTCTGGTAGGCTAAAGAAGATCAGAATCCCCTCACAAATGGAATTAAAAAAATGAGTTAAATGTGGTCGTTGTGGCAGGAGTGGGCATAATAGGAAAACTTGCAAATTTGCACTAACTCAATATTTATCATATATGTTTCAAATGCTTAAGAACATTTATCTTTATTTTTTGTTCAAGTTGTTATTTATTCATGTATTTCCATTAAACTGAAATAGGTTTATATTGAATATACTTACATCAAAACAGTATCCATACGGGACAATCTGCATCCCAACAACATCTTTAGGTTTTTCTTGTTCCATGGAGTAGTCTGTTTTTGTCGTGATTGGCCTTTGTTGAATATCTTCCTATCTTCTACCGTTATCCAATCTCGTGGTTTCTGTTTCAGAGCTATCGCCCTGCAATTAAAACTCAAAAGTTAGGCAATTCAAATAAGGATGTCATATTCCAATTTTCTTTATAACAATACATAGCTCTGAATTTATTGTGATAACCTCATTTTCATTTGCTTTATTAGGTGCTTTTCTGCCACCCATATTCAATATCCTTTGACTCATTCGTCTAATTTCATTCAACCCCCTGTTCTTATTTCTATCCATTCCTTATTATTATTTTTTTTTTTTGTATAATTGGAATATGCCCAGCCCATCAGTAGTTCCCATCAAACATTAACATATATGATTAACATGTAAGAATATATGATGCATTGCCCCATCATTAACTCTAGTTGCCGAACAGGACATGTTGAATGATATATATGGACATTAACTATTCAATGTTCACATTTTATGTATAAAATGCTCCTACCACTACAACAATTAAGGTCTTTCCCGACGCGCATATGCGTCGGGAAAGATCGGAATACGCGTCGGCAAAGGTTCTCCCGACGCGTATTCAGACGTCGGGAGACGCATCGGGAAAAACGTGTCGGCAGAGCCTCTGCCGACGCGTATTTGTCATGCGTCGGCAGAGACCATCTCTGCCGACGCATAA ATGGTTAATCTGGTGGACAATGTGCAATTCCAGATACCATGTTCTCCTGCATGCACTGTTTTGACTTCAAAGCACTTTCCTATTAAGGAGTATATATCACATTACTACTTGAATATGACTTTGTGTTCAATATACAATGGTTTAATCCATCCATTAGGCAACGAGTCTAGCTGGCATATCCCCGAGGAGGTCAAGAATATTTTAGTTCTCCCTCCCAACGTTAAGCGTTCTTCTGGTCTTTCCCGACGCGCATATGCGTCGGGAAAGATCGGAATACGCGTCGGCAAAGGTTCTCCCGACGCGTATTCAGACGTCGGGAGACGCATCGGGAAAAACGTGTCGGCAGAGCCTCTGCCGACGCGTATTTGTCATGCGTCGGCAGAGACCATCTCTGCCGACGCATAA ATGGTTAATCTGGTGGACAATGTGCAATTCCAGATACCATGTTCTCCTGCATGCACTGTTTTGACTTCAAAGCACTTTCCTATTAAGGAGTATATATCACATTACTACTTGAATATGACTTTGTGTTCAATATACAATGGTTTAATCCATCCATTAGGCAACGAGTCTAGCTGGCATATCCCCGAGGAGGTCAAGAATATTTTAGTTCTCCCTCCCAACGTTAAGCGTTCTTCTGGTCTTTCCCGACGCGCATATGCGTCGGGAAAGATCGGAATACGCGTCGGCAAAGGTTCTCCCGACGCGTATTCAGACGTCGGGAGACGCATCGGGAAAAACGTGTCGGCAGAGCCTCTGCCGACGCGTATTTGTCATGCGTCGGCAGAGACCATCTCTGCCGACGCATAA MVNLVDNVQFQIPCSPACTVLTSKHFPIKEYISHYYLNMTLCSIYNGLIHPLGNESSWHIPEEVKNILVLPPNVKRSSGLSRRAYASGKIGIRVGKGSPDAYSDVGRRIGKNVSAEPLPTRICHASAETISADA Homology
BLAST of Spg002280 vs. NCBI nr
Match: XP_022134813.1 (uncharacterized protein LOC111006994 [Momordica charantia]) HSP 1 Score: 77.4 bits (189), Expect = 1.0e-10 Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 0
BLAST of Spg002280 vs. NCBI nr
Match: XP_022155207.1 (uncharacterized protein LOC111022347 [Momordica charantia]) HSP 1 Score: 74.3 bits (181), Expect = 8.8e-10 Identity = 34/60 (56.67%), Postives = 44/60 (73.33%), Query Frame = 0
BLAST of Spg002280 vs. NCBI nr
Match: XP_030483642.1 (uncharacterized protein LOC115700217 [Cannabis sativa]) HSP 1 Score: 70.5 bits (171), Expect = 1.3e-08 Identity = 40/106 (37.74%), Postives = 57/106 (53.77%), Query Frame = 0
BLAST of Spg002280 vs. NCBI nr
Match: XP_030497480.1 (uncharacterized protein LOC115713133 [Cannabis sativa]) HSP 1 Score: 70.5 bits (171), Expect = 1.3e-08 Identity = 40/106 (37.74%), Postives = 57/106 (53.77%), Query Frame = 0
BLAST of Spg002280 vs. NCBI nr
Match: XP_030487349.1 (uncharacterized protein LOC115704274 [Cannabis sativa]) HSP 1 Score: 70.5 bits (171), Expect = 1.3e-08 Identity = 40/106 (37.74%), Postives = 57/106 (53.77%), Query Frame = 0
BLAST of Spg002280 vs. ExPASy TrEMBL
Match: A0A6J1C328 (uncharacterized protein LOC111006994 OS=Momordica charantia OX=3673 GN=LOC111006994 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 5.0e-11 Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 0
BLAST of Spg002280 vs. ExPASy TrEMBL
Match: A0A6J1DNQ8 (uncharacterized protein LOC111022347 OS=Momordica charantia OX=3673 GN=LOC111022347 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 4.2e-10 Identity = 34/60 (56.67%), Postives = 44/60 (73.33%), Query Frame = 0
BLAST of Spg002280 vs. ExPASy TrEMBL
Match: A0A5D3C2C0 (Protein FAR1-RELATED SEQUENCE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001990 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.4e-08 Identity = 32/82 (39.02%), Postives = 54/82 (65.85%), Query Frame = 0
BLAST of Spg002280 vs. ExPASy TrEMBL
Match: U5DAI0 (Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s00832p00002090 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.2e-07 Identity = 27/69 (39.13%), Postives = 42/69 (60.87%), Query Frame = 0
BLAST of Spg002280 vs. ExPASy TrEMBL
Match: A0A803R5Z4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.5e-07 Identity = 28/73 (38.36%), Postives = 46/73 (63.01%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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