Spg002233 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg002233
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Locationscaffold1: 30750567 .. 30753417 (-)
RNA-Seq ExpressionSpg002233
SyntenySpg002233
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTATTTTACCGAGCATCCTGATCCTGAGAAAAACTGCTTGGTCATCTTGAAGGATAGAGATCAACCTGTTGAAAATGACGTCATTCTTCCTGTAGGAGAGACAATATGTGGTAATTTTAGGGGATCACAACCTTGTCTAGATAATTCTACCTTTTTGTCTAGATGGTCGGAAGAAAGACTTTTGAGTCACGACTCTTCATTGAATGCGTGGTTTTTAGAGTCCCCAGTGCATAACAAGGCGCCGGGTGAAAATCCTGAATCAACTTTAGGTCGTCAAATTATTAGAAATGAACAGCTTCGTTGGGGTAGTTCATTAAAAATTCATGGAGAATTCTTCTATATCCCTGATTATTGGGAATGTTTAGAGGTCGTAATTTCTCTAAATACGCCGATACTGAAGAAGGCTCGTTTGTTTGATGCTGTAATGGCGTCCCTGTATACTTATGATCGCAATAATGACATAGTTCGAGCTTTTTGTGAAGCATGGTGTCCTTCCACAAATACACTTCATACATCATCAGGAGAATTGTCTATCTCTCTATGGGATATGTGGAGGTTTGGAGGTCTTTCCATCAAAGGAAGGTTTTATGATGAAGTTGTTCCTTGCTGTAAGGAATTATTAGGTTCGCCTGATCCAGAGGATGAAGATTGCCCAAAAAGTTGTGAGTATCTTTTTGCTGCGTACTATCACATTGCATCTCAACAACGTGATTGCCTTCAAGTTCCTATCAAATCGTGGATTTCTTTCTGGTTTAAAGGGGATTCAAAATATGAAAAACCTCCTCCCCGAAAGCCAAAGAAGGCTTCTCATCCACGTCAGACCCATAATATGGATGGAGCTCCTATCAAGTGTCACGATTGGACCGAAAAAGAAATGGATCTATTTTGCATGTTGGACATAGAAGATGAATTGAAAGATAAAACATACCTTGCCGCCTTTCTTTCTTGCTGGCTGTGCGTATTTGTATTTCCCGACCAACGTGCTTCCCTTCGTCTAGGAGTTTTTAAAGTCGCCAGTCTTATGGCCGAAGGTTACATTTTCAATCTTGTTGTTCCTGTTTTGGCCAATATCTATCATGGACTAGGCCAGATTCATAGTGCATCCCCTTCTGCTGGATTTTCAAAGGCTTGTTTCCCTCTGCACTATGTCCACGCTTGCTGGCTTATTATTTTAACACTCACTATAAAGTTCCAGCACCTGTCATTGGCTCGATGATTGTTGAGTTTTCTGGCGAGGGTGGGGCTAAGTACTTTAACGATTTTGAAGCCCGTGTACACATTTACAAAGGTAAATATGTGTCATGGTATGCGAGTCTTCAAGCCAGAAATACAGCTGAGCTTTTGAAAGATGACGGGAAATTATCGTTTTTGCTTTCTTCATTCTTCATAAGCATTTGATCGTGCTTCTTATCTTCACGTTGTGGATCGTTGATGGTTATTGAAGCTTATAGTCCTTGTCGATTTAGTCGACAATTTGGATTCTATCAAGACATACCGAATGACTTGGGTAAAGAAATTCCTGAGGCAAATTTAGCCAATGTGTTACGTCTTTGGAGGATATGCACTCAAAGAGAAACATTATCCCAAGTGTACCTTATGCTCGTGCAACGAAACCACACGCTCAAGTTACTCAACGCTACAGAAGTTGGTGGTTAGCCAAGCATGGGAATTATCTTGAAGAAGGCGTACAAAAGTTGGTGGGCAGTGCTTCTCCTCTTCCCTCTAAGCCCAAGTTACCTAAAAAGGTTGGTAATAATAATGGAGGTAAAAGGATTCGCCTGTTTGAACTTGGTGAATTTCGTTCTATTGATAACGATGGTAGCCAAAGCAGTAGTGGCGATCATCATTGGAAAATGCCTAAAAAGTCCAATCAACCATCAGTATGTGAAGATGAATTTTTTGATGGAGTTCCCAGCGCATCACAATTTCCTAAACTCCCTACAACTCTAGTAAGTGTTTTCATTCCTTCTTTATTATAATATTTTAATATTATTATTATCATTATTACTTACTTTTTTTTTTTTTTTGCAGTCACCTTTAAATGATCCCCTTATAGAAGTCGAGGGGCATCATAGTCCTCCTTCTTTTGTGAGTCCAGACGTTTTTTATTCTGTAGCCGATGGATAGAGTTGTGACTCAATCTTGTCATCCTGTAACTGATGAAATTTCTGGAAAAATGAAGACAACAACCCATGCAGCTGCATCTGAGATCTCTGATTATTGTGCTGACAATGTGATTTCCAACTATAGGAAACAGGTTACCCTTGCCATGTGGGAGAGCATACACCAGAAGATCATACGCACTTCCTTCGACAAGATACCTCGTCTTGAACAAGAGACGGTCAAAATATTTCATGAAATTTCTGAGACTCGTGCACTCGGCTTGGATCCTCTTAAAGAAATTGTAAGTGTGTATTTCAAGAAGGTAGAGAAGTATAACCAGCTGTAGTCGTCATTTTCTTCTCAATTAACTTCAGAGAGTAAGAATCGCCAATTGGAAGAGACTAAGTTTAGTTTGGAGAAGATACTATACAGTGAAAGTGAACTACTCACAACGAATGGGTATACTTCAGCAAAAACATCTGCAAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAAGCTTGAAGCTGTGAAAGCTAAGCGAGGTGAGATTTCTATGTCGATTGTCGAGAACGAGGACCTTTTACAACAACATCAACTCGAGGCTTCCAAACTGCGAGGAACTATAAGTAGTATTGAAGATGCCCCTGTTCTTACTGATGCTGATGCTAAAACTCTGACAATACTTCGTGGAATGTTGGAAGATGCACAAGAAGAGCTGAAGAACTACAAGTGGATGCCGTAA

mRNA sequence

ATGGTGTATTTTACCGAGCATCCTGATCCTGAGAAAAACTGCTTGGTCATCTTGAAGGATAGAGATCAACCTGTTGAAAATGACGTCATTCTTCCTGTAGGAGAGACAATATGTGCACCTGTCATTGGCTCGATGATTGTTGAGTTTTCTGGCGAGGGTGGGGCTAAGTACTTTAACGATTTTGAAGCCCGTGTACACATTTACAAAGGTAAATATGTGTCATGCCAATGTGTTACGTCTTTGGAGGATATGCACTCAAAGAGAAACATTATCCCAAGTGTACCTTATGCTCGTGCAACGAAACCACACGCTCAAGTTACTCAACGCTACAGAAGTTGGTGGTTAGCCAAGCATGGGAATTATCTTGAAGAAGGCGTACAAAAGTTGGTGGGCAGTGCTTCTCCTCTTCCCTCTAAGCCCAAGTTACCTAAAAAGGTTGGTAATAATAATGGAGGTAAAAGGATTCGCCTGTTTGAACTTGGTGAATTTCGTTCTATTGATAACGATGGTAGCCAAAGCAGTAGTGGCGATCATCATTGGAAAATGCCTAAAAAGTCCAATCAACCATCAGTATGTGAAGATGAATTTTTTGATGGAGTTCCCAGCGCATCACAATTTCCTAAACTCCCTACAACTCTACCGATGGATAGAGTTGTGACTCAATCTTGTCATCCTGTAACTGATGAAATTTCTGGAAAAATGAAGACAACAACCCATGCAGCTGCATCTGAGATCTCTGATTATTGTGCTGACAATGTGATTTCCAACTATAGGAAACAGGTTACCCTTGCCATGTGGGAGAGCATACACCAGAAGATCATACGCACTTCCTTCGACAAGATACCTCGTCTTGAACAAGAGACGGTCAAAATATTTCATGAAATTTCTGAGACTCGTGCACTCGGCTTGGATCCTCTTAAAGAAATTAGAGTAAGAATCGCCAATTGGAAGAGACTAAGTTTAGTTTGGAGAAGATACTATACAGTGAAAGTGAACTACTCACAACGAATGGGTATACTTCAGCAAAAACATCTGCAAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAAGCTTGAAGCTGTGAAAGCTAAGCGAGGTGAGATTTCTATGTCGATTGTCGAGAACGAGGACCTTTTACAACAACATCAACTCGAGGCTTCCAAACTGCGAGGAACTATAAGTAGTATTGAAGATGCCCCTGTTCTTACTGATGCTGATGCTAAAACTCTGACAATACTTCGTGGAATGTTGGAAGATGCACAAGAAGAGCTGAAGAACTACAAGTGGATGCCGTAA

Coding sequence (CDS)

ATGGTGTATTTTACCGAGCATCCTGATCCTGAGAAAAACTGCTTGGTCATCTTGAAGGATAGAGATCAACCTGTTGAAAATGACGTCATTCTTCCTGTAGGAGAGACAATATGTGCACCTGTCATTGGCTCGATGATTGTTGAGTTTTCTGGCGAGGGTGGGGCTAAGTACTTTAACGATTTTGAAGCCCGTGTACACATTTACAAAGGTAAATATGTGTCATGCCAATGTGTTACGTCTTTGGAGGATATGCACTCAAAGAGAAACATTATCCCAAGTGTACCTTATGCTCGTGCAACGAAACCACACGCTCAAGTTACTCAACGCTACAGAAGTTGGTGGTTAGCCAAGCATGGGAATTATCTTGAAGAAGGCGTACAAAAGTTGGTGGGCAGTGCTTCTCCTCTTCCCTCTAAGCCCAAGTTACCTAAAAAGGTTGGTAATAATAATGGAGGTAAAAGGATTCGCCTGTTTGAACTTGGTGAATTTCGTTCTATTGATAACGATGGTAGCCAAAGCAGTAGTGGCGATCATCATTGGAAAATGCCTAAAAAGTCCAATCAACCATCAGTATGTGAAGATGAATTTTTTGATGGAGTTCCCAGCGCATCACAATTTCCTAAACTCCCTACAACTCTACCGATGGATAGAGTTGTGACTCAATCTTGTCATCCTGTAACTGATGAAATTTCTGGAAAAATGAAGACAACAACCCATGCAGCTGCATCTGAGATCTCTGATTATTGTGCTGACAATGTGATTTCCAACTATAGGAAACAGGTTACCCTTGCCATGTGGGAGAGCATACACCAGAAGATCATACGCACTTCCTTCGACAAGATACCTCGTCTTGAACAAGAGACGGTCAAAATATTTCATGAAATTTCTGAGACTCGTGCACTCGGCTTGGATCCTCTTAAAGAAATTAGAGTAAGAATCGCCAATTGGAAGAGACTAAGTTTAGTTTGGAGAAGATACTATACAGTGAAAGTGAACTACTCACAACGAATGGGTATACTTCAGCAAAAACATCTGCAAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAAGCTTGAAGCTGTGAAAGCTAAGCGAGGTGAGATTTCTATGTCGATTGTCGAGAACGAGGACCTTTTACAACAACATCAACTCGAGGCTTCCAAACTGCGAGGAACTATAAGTAGTATTGAAGATGCCCCTGTTCTTACTGATGCTGATGCTAAAACTCTGACAATACTTCGTGGAATGTTGGAAGATGCACAAGAAGAGCTGAAGAACTACAAGTGGATGCCGTAA

Protein sequence

MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETICAPVIGSMIVEFSGEGGAKYFNDFEARVHIYKGKYVSCQCVTSLEDMHSKRNIIPSVPYARATKPHAQVTQRYRSWWLAKHGNYLEEGVQKLVGSASPLPSKPKLPKKVGNNNGGKRIRLFELGEFRSIDNDGSQSSSGDHHWKMPKKSNQPSVCEDEFFDGVPSASQFPKLPTTLPMDRVVTQSCHPVTDEISGKMKTTTHAAASEISDYCADNVISNYRKQVTLAMWESIHQKIIRTSFDKIPRLEQETVKIFHEISETRALGLDPLKEIRVRIANWKRLSLVWRRYYTVKVNYSQRMGILQQKHLQALREEEELEAKLEAVKAKRGEISMSIVENEDLLQQHQLEASKLRGTISSIEDAPVLTDADAKTLTILRGMLEDAQEELKNYKWMP
Homology
BLAST of Spg002233 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 5.3e-40
Identity = 160/599 (26.71%), Postives = 231/599 (38.56%), Query Frame = 0

Query: 43   GSMIVEFSGEGGAKYFNDFEARVHIYKGKYVS---------------------------- 102
            G  +VEFSGEGGAKY+ + EAR HI+KGKYVS                            
Sbjct: 402  GPRMVEFSGEGGAKYYTNLEARTHIHKGKYVSWHACLPTKNKDELLTDDGELISWNASFF 461

Query: 103  -----------CQCVTSLEDMHSKR-----NIIPSVPY---------------------- 162
                       C   T +E     R          VPY                      
Sbjct: 462  ISIRSCFLSSQCGSSTVIEPYSPCRFSRQFGFYQDVPYDLGEEIPEANFFNVRYCWMICI 521

Query: 163  -----------ARATKPHAQVTQRYRSWWLAKHGNYLEEGVQKLVGSASPLPSKPKLPKK 222
                         A  P   VT  Y+ WWLAKHG+YL+EGVQ L+   +P   K K  KK
Sbjct: 522  RENTLSQVYLPVSAPNPDTHVTSHYKVWWLAKHGDYLQEGVQHLIDRPTPPHIKSKTTKK 581

Query: 223  VGNNNGG------------KRIRLFELGEFRSIDN------------------------- 282
            + +N G             + +   E G  R +DN                         
Sbjct: 582  IEHNFGSGNQKICSDETDERLVEKIEGGTKRLVDNLSLSTRFKHLIKGGIDNVGKDNRLS 641

Query: 283  ----------DGSQSSSGDHHWKMPKKSNQPSVCEDEFFDGVPSASQFPKLPTTL----- 342
                      + SQSS+ D HWK PKK N+ S+ ++E    VP A+QF  +P+ +     
Sbjct: 642  IATKHPSKRIEDSQSSNDDRHWKRPKKPNKQSIDDEESPIRVPDAAQFFDVPSPMVSFRL 701

Query: 343  ------------------------------------------------------------ 402
                                                                        
Sbjct: 702  PFYLFIYCIFSPLLLLFLVVNIILQSSLGDHDLHIEDTLESMPNLEDCNVVLSYNGNSKE 761

Query: 403  PMDRVVTQSCHPVTDEISGKMKTTTHAAASEISDYCADNVISNYRKQVTLAMWESIHQKI 432
            P+   +  +C PV      K++ T     SEIS +CAD++IS+ R+Q  + +WE++ QKI
Sbjct: 762  PIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKI 821

BLAST of Spg002233 vs. NCBI nr
Match: KAA0031751.1 (hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 147.1 bits (370), Expect = 3.4e-31
Identity = 137/527 (26.00%), Postives = 211/527 (40.04%), Query Frame = 0

Query: 41  VIGSMIVEFSGEGGAKYFNDFEARVHIYKGKYVSCQCVTSLEDMHSKR---NIIPSVPYA 100
           V G  +  FSGEG + YF ++EAR  I+ G  +           H +    N I  +P A
Sbjct: 109 VRGPKMTNFSGEGESIYFGEYEARELIHNGARIQWHASLQNRSKHERMDLPNDIGGMPPA 168

Query: 101 --------------------------RATKPHAQVTQRYRSWWLAKHGNYLEEGVQKLVG 160
                                     R+ +P   VTQR+  WW  KHG Y E+    LV 
Sbjct: 169 ITLDNILYHWRICTRRNTLSELYLPTRSLEPCKHVTQRFTDWWTTKHGTYFEDNRHHLVS 228

Query: 161 SASPLPSKPKLPKKVGNNNGGKRIRLFE-----LGEFRSIDNDGSQSSSGDHHWKMPKKS 220
           S  P PS+P+LPK  G+N GGK IRL E     L E      D S SS  D HWK P K 
Sbjct: 229 SVIPPPSQPRLPKNRGSNLGGKEIRLVEAMAPNLEEEVKEHKDESDSSKSDRHWKRPLKK 288

Query: 221 NQPS--------------------------------VCEDEFFDGVPSA-SQFPKLPTT- 280
            + S                                   DE   G  +  S F ++ T+ 
Sbjct: 289 AKVSGDHPDGRGLSALEVPDVPPLSPLNDHLEGLIEPDSDESLTGPHAVDSAFEEVGTSR 348

Query: 281 LPMDRVVTQSCHP--VTDEI-SGKMK------------------------TTTHAAAS-- 340
            P+++   QS  P  + +EI  GKM                         ++ HA  +  
Sbjct: 349 TPVNKPTEQSLRPSALLEEIRRGKMTVGGKDLESPSSKEGACPKASLQKVSSAHAPLTFS 408

Query: 341 ---------------EISDYCADNVISNYRKQVTLAMWESIHQKIIRTSFDKIPRLEQET 400
                          E S +  + V+SN+ ++  L MWE I  KI+RT F+ IPRL  E 
Sbjct: 409 ELPLGVSNKQTMRNPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTPFEYIPRLRPEI 468

Query: 401 VKIFHEISETRALGLDPLKEI--------------------------RVRIANWKRLSLV 430
             +   I +  A GL  L+E                           + R  N K  ++ 
Sbjct: 469 ATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLSSTDKARQLNEKTSAI- 528

BLAST of Spg002233 vs. NCBI nr
Match: KAA0050516.1 (hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa])

HSP 1 Score: 145.2 bits (365), Expect = 1.3e-30
Identity = 121/387 (31.27%), Postives = 177/387 (45.74%), Query Frame = 0

Query: 97  ARATKPHAQVTQRYRSWWLAKHGNYLEEGVQKLVGSASPLPSKPKLPKKVGNNNGGKRIR 156
           AR+ +P   VTQ++  WW  KHG Y E+    LV S  P PS+P+LPK  G+N GGK IR
Sbjct: 541 ARSLEPCKHVTQQFTDWWTTKHGTYFEDNRHHLVTSVIPSPSQPRLPKNRGSNLGGKEIR 600

Query: 157 LFE-----LGEFRSIDNDGSQSSSGDHHWKMPKKSNQPSVCEDEFFDGVPSASQFPKLPT 216
           L E     L E      D S +S  D HWK P K  +  V  D       SA + P +P 
Sbjct: 601 LVEAMAPNLEEEVKEHKDESNNSKSDRHWKRPLK--KAKVSGDHPNGRGLSALEVPDVPP 660

Query: 217 TLPM------------DRVVT------------------------QSCHP--VTDEI-SG 276
             P+            D+ +T                        QS HP  + +EI  G
Sbjct: 661 LSPLNDHLEGLIEPDSDKSLTGPHAVDSAFEEVGTSKTLVNKPAEQSLHPSALLEEIRRG 720

Query: 277 KM----KT------TTHAAASEISDYCADNVISNYRKQVTLAMWESIHQKIIRTSFDKIP 336
           KM    KT         A + E S +  + V+SN+ ++  L MWE I  KI+RT F+ IP
Sbjct: 721 KMTVGEKTLRALHPKKTARSPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTPFEYIP 780

Query: 337 RLEQETVKIFHEISETRALGLDPLKEIRVRIANWKRLSLVWRRYYTVKVNYSQRMGILQQ 396
           RL  E   +F  I +  A GL  L+E     +  KR+      +  V+ +YS ++    +
Sbjct: 781 RLRPEIATVFSGIEKIHADGLTSLEE--YLNSYLKRVD----NFNDVQSSYSAQLLSTDK 840

Query: 397 KHLQALREEEELEAKLEAVKAKRGEISMSIVENEDLLQQHQLEASKLRGTISSIEDAPVL 430
            H Q   +   +   L  VK  RG++          + Q +LE +KL+  ++++E  P +
Sbjct: 841 AH-QLNEKTSAINEALTLVKQLRGDVK--------AIDQQELEVAKLQDEVNTLESTPAI 900

BLAST of Spg002233 vs. NCBI nr
Match: KAA0034815.1 (hypothetical protein E6C27_scaffold213G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 143.3 bits (360), Expect = 4.9e-30
Identity = 134/519 (25.82%), Postives = 210/519 (40.46%), Query Frame = 0

Query: 41  VIGSMIVEFSGEGGAKYFNDFEARVHIYKGKYVSCQCVTSLEDMHSKR------------ 100
           V G  +  FSGEG + YF ++EAR  I+ G  +           H +             
Sbjct: 369 VRGPKMTNFSGEGESIYFGEYEARELIHNGARIQWHANIQNRSKHERMVDTHDSSFLQMS 428

Query: 101 -----NIIPSVP--------------------------YARATKPHAQVTQRYRSWWLAK 160
                N I  +P                           AR+ +P   VTQR+  WW  K
Sbjct: 429 YFDLPNDIGGMPPAITLDNILYHWRICMRRNTLSELYLPARSLEPCKHVTQRFTDWWTTK 488

Query: 161 HGNYLEEGVQKLVGSASPLPSKPKLPKKVGNNNGGKRIRLFE-----LGEFRSIDNDGSQ 220
           HG Y E+    LV SA P PS+P+L K  G+N GGK IRL E     L E   +  D S 
Sbjct: 489 HGTYFEDNRHHLVSSAIPPPSQPRLLKNRGSNLGGKEIRLVEAMAPNLEEEVKVRKDESD 548

Query: 221 SSSGDHHWKMPKKSNQPS--------------------------------VCEDEFFDGV 280
           S+  D +WK P K  + S                                   DE   G 
Sbjct: 549 SNKCDRYWKRPLKKAKVSGDYPDGRGLSALEVLDVPPLSPLNDHLEGLIGPDSDESLTGP 608

Query: 281 PSA-SQFPKLPTT-LPMDRVVTQSCHPVT--DEI-SGKMK-------------------- 340
            +  S F ++ T+  P+++   QS  P +  +EI  GKM+                    
Sbjct: 609 HAVDSAFEEVGTSKTPVNKPTEQSLRPSSFLEEIRRGKMRVGGKDLERHSSKEGVCPKAS 668

Query: 341 ----TTTHAAAS-----------------EISDYCADNVISNYRKQVTLAMWESIHQKII 400
               ++ HA                    E S +  + V+SN+ ++  L MWE I  KI+
Sbjct: 669 LQKVSSAHAPLKFSELPLGASNKQTTRNPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIM 728

Query: 401 RTSFDKIPRLEQETVKIFHEISETRALGLDPLKEI----RVRIANWKRLSLVWRRYYTVK 430
           RT F+ IPRL  E   +   I +  A GL  L  +    + R  N K  ++  +   T+ 
Sbjct: 729 RTPFEYIPRLRPEIATVLSGIEKIHADGLTSLLRLLPTDKARQLNEKTSAI--KEALTLV 788

BLAST of Spg002233 vs. NCBI nr
Match: KAA0065375.1 (hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-29
Identity = 136/514 (26.46%), Postives = 208/514 (40.47%), Query Frame = 0

Query: 41  VIGSMIVEFSGEGGAKYFNDFEARVHIYKGK----YVSCQCVTSLE---DMH-------- 100
           V G  +  FSGEGG+ YF ++EAR  I+ G     + + Q ++  E   D H        
Sbjct: 408 VRGPKMTNFSGEGGSIYFGEYEARKLIHNGARIQWHANLQNISKHERMVDTHDSSFLQMS 467

Query: 101 ---SKRN-----------IIPSV-PYARAT-------------KPHAQVTQRYRSWWLAK 160
              S R+           II S  PY                 +P   VTQR+  WW  K
Sbjct: 468 YFVSMRSCYLSSRCENTWIITSYSPYRFGRQFGFYQDLPNDIGEPCKHVTQRFTDWWTTK 527

Query: 161 HGNYLEEGVQKLVGSASPLPSKPKLPKKVGNNNGGKRIRLFEL----------GEFRS-- 220
           HG Y E+    LV SA P PS+P+LPK  G+N GGK IRL E           G+  +  
Sbjct: 528 HGTYFEDNRHHLVSSAIPPPSQPRLPKNRGSNLGGKEIRLVEAMAPNFEEEVSGDHPNGR 587

Query: 221 -----------------------IDNDGSQSSSGDHHW---------------KMPKKSN 280
                                  I+ DG +S +G H                 K  ++S 
Sbjct: 588 GLSALEVPDVPPLSPLNDHLEGLIEPDGDESLTGPHAVDSAFEEVGTSKTPVNKPAEQSL 647

Query: 281 QPSVCEDEF------FDGVPSASQFPKLPTTLPMDRVVTQSCHPVTDEISGKMKTTTHAA 340
           +PS   +E         G    S   K    L        S H    E+         A 
Sbjct: 648 RPSALLEEIRQSKMTVGGKDLESPSSKEGVCLKASLQKVSSAHASLSELPLGAFNKQTAR 707

Query: 341 ASEISDYCADNVISNYRKQVTLAMWESIHQKIIRTSFDKIPRLEQETVKIFHEISETRAL 400
           + E S +  +NV+SN+ ++  L MWE I  KI+RT F+ IPRL  E   +   I +  A 
Sbjct: 708 SPEPSQWVGENVVSNFFQKTALCMWEDIQDKIMRTPFEYIPRLRPEIATVLSGIEKIHAD 767

Query: 401 GLDPLKEI--------------------------RVRIANWKRLSLVWRRYYTVKVNYSQ 430
           GL  L+E                           + R  N K  ++  +   T+      
Sbjct: 768 GLTSLEEYLNSYLKRVDNFNDVQSSYSAQLLSTDKARQLNEKTSAI--KEVLTLVKQLRG 827

BLAST of Spg002233 vs. ExPASy TrEMBL
Match: A0A5A7SQC9 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00140 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.7e-31
Identity = 137/527 (26.00%), Postives = 211/527 (40.04%), Query Frame = 0

Query: 41  VIGSMIVEFSGEGGAKYFNDFEARVHIYKGKYVSCQCVTSLEDMHSKR---NIIPSVPYA 100
           V G  +  FSGEG + YF ++EAR  I+ G  +           H +    N I  +P A
Sbjct: 109 VRGPKMTNFSGEGESIYFGEYEARELIHNGARIQWHASLQNRSKHERMDLPNDIGGMPPA 168

Query: 101 --------------------------RATKPHAQVTQRYRSWWLAKHGNYLEEGVQKLVG 160
                                     R+ +P   VTQR+  WW  KHG Y E+    LV 
Sbjct: 169 ITLDNILYHWRICTRRNTLSELYLPTRSLEPCKHVTQRFTDWWTTKHGTYFEDNRHHLVS 228

Query: 161 SASPLPSKPKLPKKVGNNNGGKRIRLFE-----LGEFRSIDNDGSQSSSGDHHWKMPKKS 220
           S  P PS+P+LPK  G+N GGK IRL E     L E      D S SS  D HWK P K 
Sbjct: 229 SVIPPPSQPRLPKNRGSNLGGKEIRLVEAMAPNLEEEVKEHKDESDSSKSDRHWKRPLKK 288

Query: 221 NQPS--------------------------------VCEDEFFDGVPSA-SQFPKLPTT- 280
            + S                                   DE   G  +  S F ++ T+ 
Sbjct: 289 AKVSGDHPDGRGLSALEVPDVPPLSPLNDHLEGLIEPDSDESLTGPHAVDSAFEEVGTSR 348

Query: 281 LPMDRVVTQSCHP--VTDEI-SGKMK------------------------TTTHAAAS-- 340
            P+++   QS  P  + +EI  GKM                         ++ HA  +  
Sbjct: 349 TPVNKPTEQSLRPSALLEEIRRGKMTVGGKDLESPSSKEGACPKASLQKVSSAHAPLTFS 408

Query: 341 ---------------EISDYCADNVISNYRKQVTLAMWESIHQKIIRTSFDKIPRLEQET 400
                          E S +  + V+SN+ ++  L MWE I  KI+RT F+ IPRL  E 
Sbjct: 409 ELPLGVSNKQTMRNPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTPFEYIPRLRPEI 468

Query: 401 VKIFHEISETRALGLDPLKEI--------------------------RVRIANWKRLSLV 430
             +   I +  A GL  L+E                           + R  N K  ++ 
Sbjct: 469 ATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLSSTDKARQLNEKTSAI- 528

BLAST of Spg002233 vs. ExPASy TrEMBL
Match: A0A5A7U8L3 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001600 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 6.3e-31
Identity = 121/387 (31.27%), Postives = 177/387 (45.74%), Query Frame = 0

Query: 97  ARATKPHAQVTQRYRSWWLAKHGNYLEEGVQKLVGSASPLPSKPKLPKKVGNNNGGKRIR 156
           AR+ +P   VTQ++  WW  KHG Y E+    LV S  P PS+P+LPK  G+N GGK IR
Sbjct: 541 ARSLEPCKHVTQQFTDWWTTKHGTYFEDNRHHLVTSVIPSPSQPRLPKNRGSNLGGKEIR 600

Query: 157 LFE-----LGEFRSIDNDGSQSSSGDHHWKMPKKSNQPSVCEDEFFDGVPSASQFPKLPT 216
           L E     L E      D S +S  D HWK P K  +  V  D       SA + P +P 
Sbjct: 601 LVEAMAPNLEEEVKEHKDESNNSKSDRHWKRPLK--KAKVSGDHPNGRGLSALEVPDVPP 660

Query: 217 TLPM------------DRVVT------------------------QSCHP--VTDEI-SG 276
             P+            D+ +T                        QS HP  + +EI  G
Sbjct: 661 LSPLNDHLEGLIEPDSDKSLTGPHAVDSAFEEVGTSKTLVNKPAEQSLHPSALLEEIRRG 720

Query: 277 KM----KT------TTHAAASEISDYCADNVISNYRKQVTLAMWESIHQKIIRTSFDKIP 336
           KM    KT         A + E S +  + V+SN+ ++  L MWE I  KI+RT F+ IP
Sbjct: 721 KMTVGEKTLRALHPKKTARSPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTPFEYIP 780

Query: 337 RLEQETVKIFHEISETRALGLDPLKEIRVRIANWKRLSLVWRRYYTVKVNYSQRMGILQQ 396
           RL  E   +F  I +  A GL  L+E     +  KR+      +  V+ +YS ++    +
Sbjct: 781 RLRPEIATVFSGIEKIHADGLTSLEE--YLNSYLKRVD----NFNDVQSSYSAQLLSTDK 840

Query: 397 KHLQALREEEELEAKLEAVKAKRGEISMSIVENEDLLQQHQLEASKLRGTISSIEDAPVL 430
            H Q   +   +   L  VK  RG++          + Q +LE +KL+  ++++E  P +
Sbjct: 841 AH-QLNEKTSAINEALTLVKQLRGDVK--------AIDQQELEVAKLQDEVNTLESTPAI 900

BLAST of Spg002233 vs. ExPASy TrEMBL
Match: A0A5A7T019 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213G00490 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.4e-30
Identity = 134/519 (25.82%), Postives = 210/519 (40.46%), Query Frame = 0

Query: 41  VIGSMIVEFSGEGGAKYFNDFEARVHIYKGKYVSCQCVTSLEDMHSKR------------ 100
           V G  +  FSGEG + YF ++EAR  I+ G  +           H +             
Sbjct: 369 VRGPKMTNFSGEGESIYFGEYEARELIHNGARIQWHANIQNRSKHERMVDTHDSSFLQMS 428

Query: 101 -----NIIPSVP--------------------------YARATKPHAQVTQRYRSWWLAK 160
                N I  +P                           AR+ +P   VTQR+  WW  K
Sbjct: 429 YFDLPNDIGGMPPAITLDNILYHWRICMRRNTLSELYLPARSLEPCKHVTQRFTDWWTTK 488

Query: 161 HGNYLEEGVQKLVGSASPLPSKPKLPKKVGNNNGGKRIRLFE-----LGEFRSIDNDGSQ 220
           HG Y E+    LV SA P PS+P+L K  G+N GGK IRL E     L E   +  D S 
Sbjct: 489 HGTYFEDNRHHLVSSAIPPPSQPRLLKNRGSNLGGKEIRLVEAMAPNLEEEVKVRKDESD 548

Query: 221 SSSGDHHWKMPKKSNQPS--------------------------------VCEDEFFDGV 280
           S+  D +WK P K  + S                                   DE   G 
Sbjct: 549 SNKCDRYWKRPLKKAKVSGDYPDGRGLSALEVLDVPPLSPLNDHLEGLIGPDSDESLTGP 608

Query: 281 PSA-SQFPKLPTT-LPMDRVVTQSCHPVT--DEI-SGKMK-------------------- 340
            +  S F ++ T+  P+++   QS  P +  +EI  GKM+                    
Sbjct: 609 HAVDSAFEEVGTSKTPVNKPTEQSLRPSSFLEEIRRGKMRVGGKDLERHSSKEGVCPKAS 668

Query: 341 ----TTTHAAAS-----------------EISDYCADNVISNYRKQVTLAMWESIHQKII 400
               ++ HA                    E S +  + V+SN+ ++  L MWE I  KI+
Sbjct: 669 LQKVSSAHAPLKFSELPLGASNKQTTRNPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIM 728

Query: 401 RTSFDKIPRLEQETVKIFHEISETRALGLDPLKEI----RVRIANWKRLSLVWRRYYTVK 430
           RT F+ IPRL  E   +   I +  A GL  L  +    + R  N K  ++  +   T+ 
Sbjct: 729 RTPFEYIPRLRPEIATVLSGIEKIHADGLTSLLRLLPTDKARQLNEKTSAI--KEALTLV 788

BLAST of Spg002233 vs. ExPASy TrEMBL
Match: A0A5A7VHW8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00370 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.3e-30
Identity = 136/514 (26.46%), Postives = 208/514 (40.47%), Query Frame = 0

Query: 41  VIGSMIVEFSGEGGAKYFNDFEARVHIYKGK----YVSCQCVTSLE---DMH-------- 100
           V G  +  FSGEGG+ YF ++EAR  I+ G     + + Q ++  E   D H        
Sbjct: 408 VRGPKMTNFSGEGGSIYFGEYEARKLIHNGARIQWHANLQNISKHERMVDTHDSSFLQMS 467

Query: 101 ---SKRN-----------IIPSV-PYARAT-------------KPHAQVTQRYRSWWLAK 160
              S R+           II S  PY                 +P   VTQR+  WW  K
Sbjct: 468 YFVSMRSCYLSSRCENTWIITSYSPYRFGRQFGFYQDLPNDIGEPCKHVTQRFTDWWTTK 527

Query: 161 HGNYLEEGVQKLVGSASPLPSKPKLPKKVGNNNGGKRIRLFEL----------GEFRS-- 220
           HG Y E+    LV SA P PS+P+LPK  G+N GGK IRL E           G+  +  
Sbjct: 528 HGTYFEDNRHHLVSSAIPPPSQPRLPKNRGSNLGGKEIRLVEAMAPNFEEEVSGDHPNGR 587

Query: 221 -----------------------IDNDGSQSSSGDHHW---------------KMPKKSN 280
                                  I+ DG +S +G H                 K  ++S 
Sbjct: 588 GLSALEVPDVPPLSPLNDHLEGLIEPDGDESLTGPHAVDSAFEEVGTSKTPVNKPAEQSL 647

Query: 281 QPSVCEDEF------FDGVPSASQFPKLPTTLPMDRVVTQSCHPVTDEISGKMKTTTHAA 340
           +PS   +E         G    S   K    L        S H    E+         A 
Sbjct: 648 RPSALLEEIRQSKMTVGGKDLESPSSKEGVCLKASLQKVSSAHASLSELPLGAFNKQTAR 707

Query: 341 ASEISDYCADNVISNYRKQVTLAMWESIHQKIIRTSFDKIPRLEQETVKIFHEISETRAL 400
           + E S +  +NV+SN+ ++  L MWE I  KI+RT F+ IPRL  E   +   I +  A 
Sbjct: 708 SPEPSQWVGENVVSNFFQKTALCMWEDIQDKIMRTPFEYIPRLRPEIATVLSGIEKIHAD 767

Query: 401 GLDPLKEI--------------------------RVRIANWKRLSLVWRRYYTVKVNYSQ 430
           GL  L+E                           + R  N K  ++  +   T+      
Sbjct: 768 GLTSLEEYLNSYLKRVDNFNDVQSSYSAQLLSTDKARQLNEKTSAI--KEVLTLVKQLRG 827

BLAST of Spg002233 vs. ExPASy TrEMBL
Match: A0A5A7U4C3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00240 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 7.0e-30
Identity = 126/426 (29.58%), Postives = 195/426 (45.77%), Query Frame = 0

Query: 43  GSMIVEFSGEGGAKYFNDFEARVHIYKG-------KYVSCQCVT-SLEDMHSKRNIIPSV 102
           G  +VEFSGEGGAKY+ + EAR+HI+KG       ++   Q V   L +   K N + +V
Sbjct: 299 GPCMVEFSGEGGAKYYTNLEARMHIHKGNPCRFGRQFGFYQDVPYDLSEKIPKAN-LANV 358

Query: 103 PY-----------------ARATKPHAQVTQRYRSWWLAKHGNYLEEGVQKLVGSASPLP 162
            Y                 A    P   +T  Y++WWLAKHG+YL+EG+Q L+   +P  
Sbjct: 359 RYHWMICVRESTLSQVYLPAPTLHPCNHITSHYKAWWLAKHGDYLQEGLQNLIDRPTPSL 418

Query: 163 SKPKLPKKV---------------------------GNNNGGKRIRLFELGEFRSIDNDG 222
            K K  KK+                           G +N  K +      +  S   + 
Sbjct: 419 IKSKTTKKIEHNPDKKICFSKTKEPVDAQFKFAARSGADNMHKDLLKLTTDKRPSTHTED 478

Query: 223 SQSSSGDHHWKMPKKSNQPSVCEDEFFDGVP----------SASQFPKLPTTLPMDRVVT 282
           S SS+ D HWK PK+ ++ S+ +++    VP          SAS+  K     P+   + 
Sbjct: 479 SHSSNDDRHWKRPKRPDKQSIDDEKPPIEVPDVPMASPEDLSASENSK----TPIGATIM 538

Query: 283 QSCHPVTDEISGKMKTTTHAAASEISDYCADNVISNYRKQVTLAMWESIHQKIIRTSFDK 342
            +C  VT     ++  T     SEIS +CADN+IS+ R++  + +WES+ QKIIRT F++
Sbjct: 539 STCPLVTKASPQRVGGTEPITTSEISHFCADNLISDLRQKTAITLWESLRQKIIRTPFER 598

Query: 343 IPRLEQETVKIFHEISETRALGLDPLKEI------RVRIANWKRLSLVWRRYYTVKVNYS 398
           +  LE E  KIF  I+ + +  L  LKEI       V   N  R S++ +   T      
Sbjct: 599 VSSLEPEMRKIFAAIATSGSNNLTFLKEIVDGYFQGVENHNQMRSSILLQS--TKDAQLM 658

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_031745312.15.3e-4026.71uncharacterized protein LOC116405439 [Cucumis sativus][more]
KAA0031751.13.4e-3126.00hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa][more]
KAA0050516.11.3e-3031.27hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa][more]
KAA0034815.14.9e-3025.82hypothetical protein E6C27_scaffold213G00490 [Cucumis melo var. makuwa][more]
KAA0065375.11.1e-2926.46hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SQC91.7e-3126.00PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5A7U8L36.3e-3131.27PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5A7T0192.4e-3025.82PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5A7VHW85.3e-3026.46PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5A7U4C37.0e-3029.58Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 337..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..187

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg002233.1Spg002233.1mRNA