Spg002207 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg002207
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase COP1-like
Locationscaffold1: 31762612 .. 31773340 (-)
RNA-Seq ExpressionSpg002207
SyntenySpg002207
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGCATGCGTTACCTGTCAGGGATTTAGCATGCTGCTATCGCATCCGGCTGGCCAAGTGGGAGTTGGTAATGAAAATAGTATCGCAACTAAATAGAAAGCAATTAATGTTTCATTTAACTCAAAATATGCGCTTACAAAATATACATATCACCGCATGAGGTGCTTGCGCTAAGCCTTGAAGAAGAATTTAGCTCATGCGAGCAAAACAAGACATTATGGAATAGAACATTACAAACGCAAGTTGCTCCTAATCACAGTTCCCTGTGATTTCTTTCTTTCTCCTTTGTTCTTCTTTTCTTTCTCGTCAATCGAATGCCCCCTTTTTCTTGGAATATGGGGCTTCTATTTATAAGCAAAGGAAGGAGACTTCTCCAAGTTATTAGCAACTTGGGTTAATCATCATTAGGCAAATTGCTTCATCTTTTTAGCCCTTTTTTCCGCCCACTTGCGTTTGCTATTTCAGTTGTGTCAGCGCTGTCTTTTCATCATCTTATCTGTCTCTTGATCATCTTGGAATATGTACCTGTGCTGAGAAGGAACTAAAACAAACAACTGAATTAGTTTGCGTTAGCACCCTATATTTTATAATTTCTCACCGCATACATGAATATAGCTCGCCGCATAGAATTATCGCATTTTTCATTCTTTCTGCGTTGAATCAACGCATCTTTGTTTCTTTTGGCCTTGTTTTAGTCTAAGTTTAAAGGATAAATAACTTGCTTTTTTGCAAGTTATCATTTCTCCACACGAACTCGACATGGACTACTGCTAGAGCCTTCCCCGCTATCCTCCAGCCATAGAACGGGCTTGTGGGAACCCGAGCATGATGAAATCAAGGAGAGAAAAAATGAGAGAAAATGGGTTTTTAGCAAAGTGAAGAACACGGTTTTGAGTGAGAATAATTATCCAGCTTTTTCCATTTTCAATTTTTAGCATCCATTTTCTTTTTCCACCTCTTAAAACATATATATATGGAGGTTATGTGCAGCTTGTCATTACTACAAAGTGACAGCATATGGATTAATGGCAAAAGGAAAAAGAGTTGGTATCATCTCATGGGTTTTTCAACTTATGAATTGAAATGAATTTCCAAAATTCATTTTATTCAATTAATTTCAATTTCAAATTAATCTTCTTAATTTTAAATGAAACTAATTTTGAAAACTTTAAATAAATCTAATTTATTTAATAATTTCAATTTTAATATCACATATTAAAATTAATAATACAACAATACTATTCTCTCTCAAAACCGGTGAATGTGAATCACTATTTCAAATTCAAACCGAATATCTCGAACGTGAATCCCTATTCACATTTGTTGTATTTAAATCATATTTAAATAACTATATCTCTCTTAAAATATGGTTTAATTAATAATTAAACTGTTACGTTAAATTATATCAAATATAATTAACGATATCTCCAAAAATCGAATTTGAACGTTTTCAAATTCTTTCATCACTTTGTTCTAAGGTTAATCCGTATGAGCTAGCAGGGGGACCTAATGGACCTACAGATCATGGGCTCCAACGATCCGAGATTAACCGATTGAACTCTTTCAATCCTAATTAACCAACATTCGTTAACTAACAGGACACTCCACTATAGCTCATAGCTGAACTCCCCTCACTATAGATATATTTTTGTCCACCCGATATAACCGTGATCAGTAAGTTAATCCTTCACAGGTTGTTTGTAACTATAGTAAGGTCAAAATTCCGTTTTACCCCTATAGCACTTCTTGTTCCTTAAGCCTTCACTGAATCCCTAATGAACAATTGGTTTGTGGTCCTACCACTAAACCTAAAACCTCTCAGGCCAATGAGAGGGCGGGGCGCGCCTTTGTTCACGTCTCGAAGTCAGCTCTTAAGGGAACAACCTCTCTACTATCCCTAAAGACGGGTAGGAGCGAATTCCATCTTGCAGGACTATGTCCCCAGCTATCTACCCGATCTTATCCCCAAAGTGGCAGGTTTATTGAGCGGCGCTTATGGGCCACTCTCACTTATGCAAATCGAAGGATAATTGATAACTCTCCAAAAGGGAGTTATATAGACCTTATTTCTATATTGATTTGTGTGTCTTTTGTGCTAAATAGGGTTGCTTTTAGATAGATATTATATGTTTTAACCCATTTGGAAGAATGGATGCTTTGGAAGTTATTTTGTGCAGAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGTGTTGGAGCAAAGCTGGGAGCAAAACTGTCACGTCACAGTTCGTTAGCCAATGTAATGAACTGAATTCTGTTAAGCTATTCTCGGGATAAAGGAGCAAGGAGAGCCATCCACGTGTCTAGGTCAACCTAATTCAAGCCTCCTATCACTCTATAAAAGGAGATAGCAGCCCAAGTCAAATGCATTCCTTTTTGGGAAGGGAATTCCATCCTTGGGAGGAACATTCCACTTTTGGACGGATCATTTCTCATTTTCATTTTGGGAGCCGAATAGAGGAGAGAGTTGGAGACCAAAAAGAAGACCATCAACTGCAAGCTGATCAAGGGAATTAATATTTTCTTGCATTATTTTGTAGTTATGGATATGCTTACTCAGATTGTAACGTGTGTTTCCATGCATTTAATGAACTAAGTAACATTAGGCGTTGGTTAGGGAACATGTAATTGTCTTGCTTAACTTCTAGTAATAAATATTGATTCTACGCCTCTTGATTAATTGTTGTGGTCATTTCAATTTTGTGCCCGCCTGGCCAGCCGGTATGAATACCTCTCTCTAGTTTCAGGGATGATTTAGGGAGTGTGTGGTGGTTAATCACACTAGATCATTGTGTATTGGTGAACGCCAGTGACTGAGCTAGGGATAGCCAGTTGCCTAGTGCTTGATCGGAAGAGCTTCATTGGAGTTGAAACACATTCTAAAAAATCTGAAGTTCCGGGAGGAATCCGCTAATAAGACTACGAGAGTTTTGCATGATCAATAATATTGCTAGAGCATCTTTTAAAACAATTACTAAATCCTGACCAACCCCTGTTTCTAATCTGTCTGCCTATTTGTTTACTTTCTGTTCTGTCATTTCTTTTGCTTCAGCATTCTATAAAAATCAATCATTTTTCCCACTTTTGAAACCATTGAAAAGCTAAACAAAATAGATAAAGTGAAAGCTAATTCAGACCTTGGATTCGATAAATACTTATTTACTTGCTGCGGACTGTGTATACTTGCACAGAGTTCTAGGGTCCATTTTTATATCTAATTTTTACTCACTTTGGAAACCCAACAAGTTTTTGGCGACCATTGCCGGGGACTTGAATAAGTTTTTATCTGATCTGTTTTGTGAATGTGTTTTAGTGGTTTGGTGCTAGAACTTTTTGATTGTTTCTTTTGTTTTTGCAGGTGTGAGTTTGGTGCATGAGCGATCCGCCTGGGTAAGGTTCGAGCTTGATCCAGAAATCGAGAGAACATTCAGGAGAAGAAGGAGAGAGCAGCGTAGAAACCAGAATTCAATGGCTGACGTGCCGCGTCTTCCGCAAGGTCCAGAAGATCCAGCGAACCCCCAGCAGAATCGTGTGCTGCAGCAAAATCACCCGCTAGAGCAAAATGAACAGCAAAATAATCAGGCTGAGAATCCTATCTTGGTAGCAAATGATAGGGCCAGAGCCATTCGAGCTATGTTTTTCCAATGTTTGATGAGTTAAATCCAGGGATTGCACGTCCTCACATTGAGGCAGCAAATTTTGAAATGAAACCGGTAATGTTTCAGATGTTGCAAACTGTGGGTCAGTTCCATGGTTTGTCATCTGAAGACCCCCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTGATTCTTTTGTAATTCAAGGAGTGCCTAGAGATGCCCTTAGATTAACTTTGTTCCCGTATTCTCTTAGAGATGGAGCAAAGGCATGGTTAAATTCTTTTGCTCCAGGATCAATTAGAACATGGAATGAGTTAGCAGAAAATTTTTTGAGTAAATTTCCCACGAAATAGAAATGCTAAATTGAGGAGTGAAATAGTAGGGTTTAGGCAACTTGAGGATGAGACTTTTAGTGAGGCTTGGGAAAGGTTTAAGGAGCTTTTGCGAAAGTGTCCCCACCATGGTTTACCTCATTGTATCCAAATGGAAACATTTTACAATGGGTTAAATGGAGCAACCCAAGGTATGGTTGATGCTTCAGCTGGAGGGGCCCTTTTGGCAAAAACTTTTAATGAAGCCCATGAAATTTTAGAAATAATATCAACTAATAGTTGTCAGTGGTCAGATGTTAAAGGCACAAATAAAAAAGTTAAGAGTGTGTTAGAGGTTGATGGTGTGTCCACCATTAGGGCTGATATTGCAATGTTAGCTAACGCTCTTAAAAATTTGACAGTGGTTAGTCATCACTAGCCGCCAGCTGTGGAGCCTGCTGCAGTGGTGAACCAAGTTGCAGAGGAAGCATGTGTCTATTGCGGTGAAGATCACAACTACGAGTTTTGCCCTAGCAATCCAGCTTCTGTGTTTTTTGTAGGTAACTAGAGGAACAACCCTTATTCTAACTTTTATAATCCAGGTTGGCGCAACCACCCCAACTTTGCGTGGGGAGGACAAGGAAGTAATGTGCAAGCAGAGCAAAAGGCGAACCAGTCAGGATTTGCTAAAGCGCAAGTATTGCCCCAGCAAAATAAGCAGGCTTTGCCCTAGCAAAGTTCGAAGAGTTCTCTTGAGGCAATGATGAAAGAATATATGGCTCGTACAGATGCCGCTATTCAAAGTAATCAAACTTCAATGAGAGCCCTGGAATTACAAGTGGGTCAGCTAGCTAATGAGCTGAAGGCAAGGCCTCAAGGGAAGCTTCCTTCAAATACTGAACACCCTAGAAGGGAAGGTAAGGAGCAAGGTAAAGGCAGTGACTCTTAGGAGTGGTAAGCCACTAGAGGAAAGAAAAGAGCCTAGTAAAACCCAGGATATAGAAAAGAATTGTGATAAAAATGTTGTTGTTGAGAAAGAGTTGGAGTCTGGTCAGGGTGCTGGAGGCAGCAATAATGATGCTGGAGCATCTGGTTCTGTTCCAGATGTGGAACCACCTTATGTGTCTCCCCCACCTTATGTACCACCTCTACCTTTTCCACAAAGGCAAAGGCCTAAGAATCATGATGGTCAATTTAAGAAGTTTTTGGAGATTCTTAAGCAATTGCACATAAATATCCCGTTAGTAGAAGCTAGTGAGCAAATGTCTAATTATGCTAAATTTCTTAAGGATATTTTAACTAAAAAGAAGAGGTTAGGTGAGTTTGAAACTGTATCTCTTACTGAGGAATGTAGTGCTATTCTTAAGAATGGGCTACCAACCAAGGCTAAGGATCTAGGGTCATTTACTATACCTGTGTCTATAGGTGGAAAAGAGTTAGGTAGAGCACTCTATGATTTAGGTGCAAGCATTAACCTTATGCCTCTTTCGGTCTATCAAAAGCTAGGTATTGGTGAAGCTAGGCCTACCACAGCTAGGTATTGGTAGGCATAAGGTTAATACCTTGATTTTATTATTTTACACTATGAGGCTGATAAAGATGTCCCAATTATTCTAGGTCGTCCATTTTTGGCTACTGGTAGGGCTTTGATAGATGTTCAAAAAGGGGAATTAACCATGAGGGTTTACAATGAGGAAGTGAAATTTAATGTGTTTAAGGCCATGAAATATCCAGACGAAATGGAAGATTGCTCTTTCATTAGGATTCTGGAGAACACAATTGTTGAGACAGCAATGCAGGATTCGGCTGACAAGCATTTGGAAGATCATGGAAAGGTTAGTGTACAGGATTTAGAAGTTTGTTCTTTAGAAAGAAAAAATGAAAAAAAAGGTGTTTAGGTGTGAGGATGTTTTTGAGTCTTTAGATTTAGATCAAAGGAAGGCTCCTCCTATTAAGCCATCCCTGATTGAGGCACCCACTTTAGATTTGAAGCCCTTGCCGGATCATCTAAAGTATGTGTATCTTGGGGAGGGTGCGACGTTGCCCATTATTGTTGCATCAGATTTATTGCCGGAGCATGAAGAGGCCTTAATAAAATTGCTGCAGCAATATCGCAAGGCAATAGGTTGGACATTGGCTGACATTCAGGGAATTAGTCCATCTTTTTGTATGCACAAAATCACTCTAGAGGAGGGATCCTTTAGGAGTATTGAGCAGCAAAGAAGGCTTAACCCTGCAATGAAAGAGGTTGTTAAAAAGGAGGTGATTAAATGGTTGGATGCGGGCATTATTTATCCAATTGCAGATAGCAATTGGGTAAGCCCTGTCCAATGTGTTCCTAAGAAAGGAGGTGTCACTGTGGTGAGCAATAAAGATAATGAGTTGATCCCAACCAGGACAATAACTGGCTGGAGGGTTTGCATGGATTACAGGAGGCTTAATAAAGCTACCCGTAAGGACCACTTCCCTCTACCATTTATTAACCAAATGTTGGATAGATTGGTTGGTCAGGCCTACTACTGTTTCTTAGATGGTTATTCTGGGTATAACCAAATTACCATTGCTCTTGAGGATCAGGAAAAAACCACTTTCACATGCCCTTATGAGACGCTTGCTTTTAGGCGAATGCCTTTTGGCCTTTGCAATGCTCCAGCAACATTTCAGAGGTGTATGTTAGCAATTTTTCTGATATGATTGAGTCCACTATTTAGGTATTTATGGACGATTTTTCAGTTTTTGGAGGGTCTTTTCAAAGTTGTTTGGATAATTTAGGTAAGGTGTTAAAAAGATGTGAGGATACCCATCTAGTTCTTAATTGGGAAAAATGTCACTTCATGGTGAAGGAGGGCATTGTGTTAGGTCATAGAATTTCTAAGAATGGTCTAGAAGTTGATCGAGCAAAAATTGAGGTTATTGAGAGACTAGAACCACCGAATTCAGTGAAAGGGATTCGGAGCTTTTTAGGTCAAGCTGGATTTTATAGAAGGTTCATAAAGGATTTCTCAAAAATCAGTAAACCTCTTTGTAACTTATTGTGCACTGATCATGTTTTTTACTTTAATGCAGATTGTAGGAAGGCTTTTGAGACTTTAAAGGCTTCTTTAATCTCAGCACCCATTCTTTGTGCACCTAATTGGAATTTACCATTTGAGGTAATGTATGATGCGAGTGATGCTGCGGTAGGTGCTATGCTGGGGCAAAAGCAGGGCAAATTTATCCATCCGATATATTATGCAAGCAGGGTTTTAAATGAGGCACAAGTCAACTATACAACTACTGAAAAGGAGTTGTTAGATGTTGTGTTTGCTTTTGAGAAATTCCGATCGTATTTGGTTGGATCCAAAGTCACGGTTTTCACGGATCATGCAGCAATAAGGTATTTAATGTCTAAAAAGGATGCAAAGCCTAGACTAATTCGTTGGGTTTTATTATTGTAGGAATTCGACTTGGAGATAAAGGACAAGAAGGGATCAGAGAATGTTATTGCAGATCATTTGTCTCGTCTTGATCCAACATCGTCTTTGCTGAAGCAATCTGCCATTTCAGATTCTTTTCCAGATGAACAGCTCTTTGCTGTTGAGGTAAAGGTAGTCAAGGATGTCATTTGGTATGCTGATATTGCTAACTTTTTGGTCAAGGGAGTCACTCCTATTGATATGGATTGGAGGCAGACGAAGAAGTTTAAGCATGATGCGAAATATTTTTATTGGGATGAACCATTTATGTATAAGCAATGCTCTGATGGTATTATTCGTAGGTGTGTTTCAGGTGATGAAGCAAAGGAAATCCTAGAGCAATGTCACTCTTCGCCGTATGGAGGCCATTTCAGCGGTCAGAGGACAGCTATGAGGATTTTGCATTGCGGATTCTTCTGGCCCTCCTTGTTTAAAGATGCCCATTGGTTCTACAAGTAATGTGATGCCTGCCAAAGGAGAGGAAACTTAGGGCCTAGAGATGAAATGCCTCTTACTTACATTTTGGAAGTTGAATTATTCGATGTATGGGGTATTGATTTTATGGGGCCATTTCCCCCTTCTAATGGTAATGTTTTTATCTTATTGGCAGTTGATTACGTGTCCAAGTGGGTAGAGGCCATTGCATGCCATCAGAATGATGCCAAGACAGTGTCAAGGTTTCTTCAATCGCACATCTTTGCGCGGTTTGGGACACCTAGAGCTCTAGTGAGTGATGAGGGTACACATTTCAATAACAATATCTTAACTAAGCTTTTAGCTAAGTATGGAATCAAGCATAGAATAGCTACCCCTTATCACTCACAAGCAAATGGTCAAGCTGAAATTAGCAATAGGGAAATAAAATCTATTCTAGAAAAAGTAGTCCATCCATCTAGGAAGGATTGGTATTTTAGGTTGGATGAGGCTCTTTGGGCTTATAGGACAACCTATAAGATTCCTCTAGGTATGTCTCCCTATAGGTTAGTATATGGGAAAGCTTGTCATTTACCATTAGAGCTAGAGCATAAAACGTTTTGGGCTTTGAAAAAGTTAAATTTTGATCTGAGTCGTGCAAGGGCAATAAGGATGCTGCAGCTTAATGAATTGGAGGAATTTCGCCAGTTTTCTTACGAAAATTCGAAAATGTATAAAGAAAAGACTAAGTTGTGGCATGATAAGAAAATTAAGCCTAAAGAATTTGTCAAAGGTCAGAGAGTCTTGCTTTACAATTCTAGATTAAAATTGTTTCCTGGGAAACTAAAATCTAAATGGTCAGGGCCATTTATTGTGATTGAAGTTTTCCCCCATGGAGCAATTACTTTGCAGGATGAAAAAGATGGGAGAATGTTCAAGGTGAATGGACAGCGTGTGAAGCACTATTGGGGAGAGGAGTTCCAGTCGAAATATCCTTCCCTAAAGCTGGTAGATGAATGAGAGAGAGCGGTATTTGCGGGAGCATTTCACAGAGCAATATTTTTAAGCTCCCAGTGGTTGTTTTTATTTCTTGCTGATTTGGTTTGATTTTAATTCGAATTATTTTGAATTATATTTGGTTTAAATCTTATCTGATTTATTTTAATTATTATTTTTCGTAGGTTTTATTTTCGGTATTTTTATTTCATTTTTCGCTAGTTTATTTAATCTAGTTATTTAATTTAATCTGTTAGTTTAGATTTTAATTAAATTTTATTTTTGGTTATTTAAATTTCTGTTTAGATTAGGTTTGAATAAAATTTCTGCTAACTTATTCGGTTTTGAATAATAAATAAAAATAAGAGAAGATTTGATTTGAGCGGTTAATTTAAATTTGAATTTTCTGATTTGATTTTATTTAAATTTTTCGTATCCGAGATTTTTCTGGAAGATAATCCTTGTTCAAAAGGTTGTTGCGGCAAAGTTATGGCTGAAGCAAATCGTTCGTCCGAATAGGAAGGGTTTTGGTGAGAATTAATTACTTTTACCGTTTGGATTTTGAATTTTCTGTGGGCAGGTAAATTGCATGGATGCTGCCACGTGTCGCACAGGGGCAATCCAACGGTTTAGCCGTTTGACAGCACATAATTATTTACCATGGGCGATTGAGATTCAAGATTTTACCGTTAATGGATTTAATTAACAGATTAAATGAGATTTAAACGGTAATTCCATTTAATGAGGGGCAAAATCTTTCGGTTATGATTTGTTTTGCTGAAGCCCTATTTATTCACAGACCTGCGGTAAGTTCTTTTTCACTTCATCTTCTCGTTTCAATCTTTGTTGTTTGTATTCTTCTTTCTTTGCCTCTGTGTGCGATAAGTTCCTTGAGTTTTCAATGGCAAAAACGAGAGCAAGAAAAGAGCGGGAAAGTGAGGAAGAAGAGGTACCTGTTACCCCCGAAGTACAAAAAGTGAAAGCGAAGAAAACGAAAACGTTGGAGGAAAAATAAGCCAAAAGAAGGAGAAGGCAGCAAAGGGCTGAGGTTCAAGAAGTTGTTTAGAAGGCAGCGGAGGACGTTGCTGCCGCTGAAGAAGGCAATCCGAGGGAACCTGAAGTACAAAACCCAGAGCAGACTGAGCCGAGAGTTACGGATACAGAGGAAGTGTGAGAGGAAAATACAAAGGAAGTTCAAGAAAAGCAGACTGAGGATGTGCAAGAAGAATAGGCAGAGGTTGCGCCTGAAAAAGGTAATGAGCCAGTGCAGGAGGCTCGAGTGGAGGTAATCATGCCGGAAGTGCCACGACGCCGCCGCGTGAAGCGAAAGGCTGGTCGTGTCAGGGTAGTCCGAACTGATACTCCCTCGCTGCCAACCACTAACACTGAGAGAGAAAATGCAGAGAGAGAGGAGCAAGAGAAAAAAGAGGCCGAGGATAAAGCAAGAGAGGTAGCAGAGAAAAAGGCTGAAGAAGAAAGGTTGCTCAAGTGAAGGGCAGACAAGGGCAAGAGTGTTGCTACGGCATCGGAGGAACCTGACGAGATAGAAGAGCCACAGTTGTCGTATGTCCGCTTCGTCAACAATCTTGCCAGAGCAAAATATGCTGAGCTGCTGAAGAGAGACTTCCTGTTTGAAAAAGGATTTAGTGGTGATCTTCTGCATTTTCTAAGGGTCGGCATTACGAACCAAGGTTGGGAATCATTCTGTTCAAAGCCTGAATCTGTGAACGCGCAGGTAGTACACGAATTTTATGCAAATATTGAAGAGGAAGAAGGTTTCCAAGTTATCGTTCGAGGTGTAGAAGTTGATTGGAGTCCTAATGCTATTAACGCCCTGTACAACCTTCAAGATTTCCCCCACGCAGGATACAATGAGATGGCTGTAGCACCATCTAATGAGTAG

mRNA sequence

ATGTCTGCATGCGTTACCTGTCAGGGATTTAGCATGCTGCTATCGCATCCGGCTGGCCAAGTGGGAGTTGAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGTGTTGGAGCAAAGCTGGGAGCAAAACTGTCACGTCACAGTTCGTGTGAGTTTGGTGCATGAGCGATCCGCCTGGGTAAGGTTCGAGCTTGATCCAGAAATCGAGAGAACATTCAGGAGAAGAAGGAGAGAGCAGCGTAGAAACCAGAATTCAATGGCTGACGTGCCGCGTCTTCCGCAAGACCTGCGGCAGCGGAGGACGTTGCTGCCGCTGAAGAAGGCAATCCGAGGGAACCTGAAGTACAAAACCCAGAGCAGACTGAGCCGAGAGTTACGGATACAGAGGAAGTGTGAGAGGAAAATACAAAGGAAGTTCAAGAAAAGCAGACTGAGGATGTGCAAGAAGAATAGGCAGAGGTTGCGCCTGAAAAAGGTAATGAGCCAGTGCAGGAGGCTCGAGTGGAGGGCAGACAAGGGCAAGAGTGTTGCTACGGCATCGGAGGAACCTGACGAGATAGAAGAGCCACAGTTGTCGTATGTCCGCTTCGTCAACAATCTTGCCAGAGCAAAATATGCTGAGCTGCTGAAGAGAGACTTCCTGTTTGAAAAAGGATTTAGTGGTGATCTTCTGCATTTTCTAAGGGTCGGCATTACGAACCAAGGTTGGGAATCATTCTGTTCAAAGCCTGAATCTGTGAACGCGCAGGTAGTACACGAATTTTATGCAAATATTGAAGAGGAAGAAGGTTTCCAAGTTATCGTTCGAGGTGTAGAAGTTGATTGGAGTCCTAATGCTATTAACGCCCTGTACAACCTTCAAGATTTCCCCCACGCAGGATACAATGAGATGGCTGTAGCACCATCTAATGAGTAG

Coding sequence (CDS)

ATGTCTGCATGCGTTACCTGTCAGGGATTTAGCATGCTGCTATCGCATCCGGCTGGCCAAGTGGGAGTTGAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGTGTTGGAGCAAAGCTGGGAGCAAAACTGTCACGTCACAGTTCGTGTGAGTTTGGTGCATGAGCGATCCGCCTGGGTAAGGTTCGAGCTTGATCCAGAAATCGAGAGAACATTCAGGAGAAGAAGGAGAGAGCAGCGTAGAAACCAGAATTCAATGGCTGACGTGCCGCGTCTTCCGCAAGACCTGCGGCAGCGGAGGACGTTGCTGCCGCTGAAGAAGGCAATCCGAGGGAACCTGAAGTACAAAACCCAGAGCAGACTGAGCCGAGAGTTACGGATACAGAGGAAGTGTGAGAGGAAAATACAAAGGAAGTTCAAGAAAAGCAGACTGAGGATGTGCAAGAAGAATAGGCAGAGGTTGCGCCTGAAAAAGGTAATGAGCCAGTGCAGGAGGCTCGAGTGGAGGGCAGACAAGGGCAAGAGTGTTGCTACGGCATCGGAGGAACCTGACGAGATAGAAGAGCCACAGTTGTCGTATGTCCGCTTCGTCAACAATCTTGCCAGAGCAAAATATGCTGAGCTGCTGAAGAGAGACTTCCTGTTTGAAAAAGGATTTAGTGGTGATCTTCTGCATTTTCTAAGGGTCGGCATTACGAACCAAGGTTGGGAATCATTCTGTTCAAAGCCTGAATCTGTGAACGCGCAGGTAGTACACGAATTTTATGCAAATATTGAAGAGGAAGAAGGTTTCCAAGTTATCGTTCGAGGTGTAGAAGTTGATTGGAGTCCTAATGCTATTAACGCCCTGTACAACCTTCAAGATTTCCCCCACGCAGGATACAATGAGATGGCTGTAGCACCATCTAATGAGTAG

Protein sequence

MSACVTCQGFSMLLSHPAGQVGVEYIAERLEGAKSVLEQSWEQNCHVTVRVSLVHERSAWVRFELDPEIERTFRRRRREQRRNQNSMADVPRLPQDLRQRRTLLPLKKAIRGNLKYKTQSRLSRELRIQRKCERKIQRKFKKSRLRMCKKNRQRLRLKKVMSQCRRLEWRADKGKSVATASEEPDEIEEPQLSYVRFVNNLARAKYAELLKRDFLFEKGFSGDLLHFLRVGITNQGWESFCSKPESVNAQVVHEFYANIEEEEGFQVIVRGVEVDWSPNAINALYNLQDFPHAGYNEMAVAPSNE
Homology
[Close]
BLAST of Spg002207 vs. NCBI nr
Match: PKC51568.1 (hypothetical protein RhiirA1_483454, partial [Rhizophagus irregularis])

HSP 1 Score: 73.2 bits (178), Expect = 4.5e-09
Identity = 38/112 (33.93%), Postives = 60/112 (53.57%), Query Frame = 0 

Query: 175 KSVATASEEPDEIEEPQLSYVRFVNNLARAKYAELLKRDFLFEKGF-----SGDLLHFLR 234
           +S   +++ P   +   +  V F ++ AR ++  L+ +  + E+GF      GDLL    
Sbjct: 8   RSQGPSTQAPTSSDSSSMGEVEFTSDGARTEFQRLMNKSIVKERGFLPTAEDGDLLSM-- 67

Query: 235 VGITNQGWESFCSKPESVNAQVVHEFYANIEEEEGFQVIVRGVEVDWSPNAI 282
             I  +GWESFC  PE+V   ++ EFYAN +E      +VRG+ VD+S  AI
Sbjct: 68  --IQERGWESFCEAPEAVPLAIIREFYANAKENRDGFTVVRGIRVDYSAEAI 115

[Close]
BLAST of Spg002207 vs. NCBI nr
Match: KZM94204.1 (hypothetical protein DCAR_017447 [Daucus carota subsp. sativus])

HSP 1 Score: 72.4 bits (176), Expect = 7.6e-09
Identity = 37/112 (33.04%), Postives = 61/112 (54.46%), Query Frame = 0 

Query: 175 KSVATASEEPDEIEEPQLSYVRFVNNLARAKYAELLKRDFLFEKGF-----SGDLLHFLR 234
           +S   +++ P   +   +  V F ++ AR ++  L+ +  + E+GF      G+LL+   
Sbjct: 8   RSQGPSTQAPTSSDSSSMGEVEFTSDGARTEFQRLMNKSIVKERGFLPTAEDGELLNM-- 67

Query: 235 VGITNQGWESFCSKPESVNAQVVHEFYANIEEEEGFQVIVRGVEVDWSPNAI 282
             I  +GWESFC  PE+V   ++ EFYAN +E      +VRG+ VD+S  AI
Sbjct: 68  --IQERGWESFCEAPEAVPLAIIREFYANAKENRDGFTVVRGIRVDYSAEAI 115

[Close]
BLAST of Spg002207 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 68.9 bits (167), Expect = 8.4e-08
Identity = 40/102 (39.22%), Postives = 52/102 (50.98%), Query Frame = 0 

Query: 195 VRFVNNLARAKYA-ELLKRDFLFEKGFSGD------LLHFLRVGITNQGWESFCSKPESV 254
           V+F    A  +Y   +  R    EKGF  D       L F+   IT   W+ FC+ PE  
Sbjct: 23  VKFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQLPFIAQVITQHNWKQFCAHPEDP 82

Query: 255 NAQVVHEFYANIEEEEGFQVIVRGVEVDWSPNAINALYNLQD 290
              +V EFYAN+ + E   V VRGV+V WS  AINA++ L D
Sbjct: 83  IVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD 124

[Close]
BLAST of Spg002207 vs. NCBI nr
Match: PON42276.1 (hypothetical protein PanWU01x14_283280 [Parasponia andersonii])

HSP 1 Score: 66.6 bits (161), Expect = 4.2e-07
Identity = 39/102 (38.24%), Postives = 52/102 (50.98%), Query Frame = 0 

Query: 195 VRFVNNLARAKYAE-LLKRDFLFEKGFSGDLLH------FLRVGITNQGWESFCSKPESV 254
           V+  +  A  +Y E +  R    EKGF GD         F+   IT   W+ FC+ PE +
Sbjct: 14  VKLKSEAAETRYEENIQNRPLSAEKGFVGDNSKPLEKPPFIEDVITQHNWQLFCAHPEDL 73

Query: 255 NAQVVHEFYANIEEEEGFQVIVRGVEVDWSPNAINALYNLQD 290
            A +V EFYAN+   +   V VRGV+V  S  AIN +Y L D
Sbjct: 74  IAPLVREFYANMTNPDDDTVYVRGVQVPLSAEAINTIYGLGD 115

[Close]
BLAST of Spg002207 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 66.6 bits (161), Expect = 4.2e-07
Identity = 39/102 (38.24%), Postives = 51/102 (50.00%), Query Frame = 0 

Query: 195 VRFVNNLARAKYA-ELLKRDFLFEKGFSGD------LLHFLRVGITNQGWESFCSKPESV 254
           V+F    A  +Y   +  R    EKGF  D       L F+   IT   W+ FC+ PE  
Sbjct: 14  VKFETEAAETRYENNIQNRPLNAEKGFVLDNSETMGQLPFIAQVITQHNWKQFCAHPEDP 73

Query: 255 NAQVVHEFYANIEEEEGFQVIVRGVEVDWSPNAINALYNLQD 290
              +V EFYAN+ +     V VRGV+V WS  AINA++ L D
Sbjct: 74  IVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGD 115

[Close]
BLAST of Spg002207 vs. ExPASy TrEMBL
Match: A0A2N0QKH9 (Uncharacterized protein (Fragment) OS=Rhizophagus irregularis OX=588596 GN=RhiirA1_483454 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.2e-09
Identity = 38/112 (33.93%), Postives = 60/112 (53.57%), Query Frame = 0 

Query: 175 KSVATASEEPDEIEEPQLSYVRFVNNLARAKYAELLKRDFLFEKGF-----SGDLLHFLR 234
           +S   +++ P   +   +  V F ++ AR ++  L+ +  + E+GF      GDLL    
Sbjct: 8   RSQGPSTQAPTSSDSSSMGEVEFTSDGARTEFQRLMNKSIVKERGFLPTAEDGDLLSM-- 67

Query: 235 VGITNQGWESFCSKPESVNAQVVHEFYANIEEEEGFQVIVRGVEVDWSPNAI 282
             I  +GWESFC  PE+V   ++ EFYAN +E      +VRG+ VD+S  AI
Sbjct: 68  --IQERGWESFCEAPEAVPLAIIREFYANAKENRDGFTVVRGIRVDYSAEAI 115

[Close]
BLAST of Spg002207 vs. ExPASy TrEMBL
Match: A0A164YA28 (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_017447 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.7e-09
Identity = 37/112 (33.04%), Postives = 61/112 (54.46%), Query Frame = 0 

Query: 175 KSVATASEEPDEIEEPQLSYVRFVNNLARAKYAELLKRDFLFEKGF-----SGDLLHFLR 234
           +S   +++ P   +   +  V F ++ AR ++  L+ +  + E+GF      G+LL+   
Sbjct: 8   RSQGPSTQAPTSSDSSSMGEVEFTSDGARTEFQRLMNKSIVKERGFLPTAEDGELLNM-- 67

Query: 235 VGITNQGWESFCSKPESVNAQVVHEFYANIEEEEGFQVIVRGVEVDWSPNAI 282
             I  +GWESFC  PE+V   ++ EFYAN +E      +VRG+ VD+S  AI
Sbjct: 68  --IQERGWESFCEAPEAVPLAIIREFYANAKENRDGFTVVRGIRVDYSAEAI 115

[Close]
BLAST of Spg002207 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.1e-08
Identity = 40/102 (39.22%), Postives = 52/102 (50.98%), Query Frame = 0 

Query: 195 VRFVNNLARAKYA-ELLKRDFLFEKGFSGD------LLHFLRVGITNQGWESFCSKPESV 254
           V+F    A  +Y   +  R    EKGF  D       L F+   IT   W+ FC+ PE  
Sbjct: 23  VKFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQLPFIAQVITQHNWKQFCAHPEDP 82

Query: 255 NAQVVHEFYANIEEEEGFQVIVRGVEVDWSPNAINALYNLQD 290
              +V EFYAN+ + E   V VRGV+V WS  AINA++ L D
Sbjct: 83  IVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD 124

[Close]
BLAST of Spg002207 vs. ExPASy TrEMBL
Match: A0A803NJE1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.5e-07
Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 0 

Query: 178 ATASEEPDEIEEPQLSYVRFVNNLARAKYAELLKRDFLFEKGFSGDLLHFLRVGI----- 237
           A++S  P       +   RFV++ A+ +Y +L  R F+ ++G   D L   R+GI     
Sbjct: 14  ASSSNPPRSSGRSNVDRARFVSSEAQERYLQLKDRPFIEDRGMEIDDLRHPRIGIPSVFE 73

Query: 238 ------TNQGWESFCSKPESVNAQVVHEFYANIEEEEGFQVIVRGVEVDWSPNAINALYN 291
                  N+GW+ F    E  N  +  EF+AN  E E  +V VRGV+V  S  AI+A+Y+
Sbjct: 74  PIREQVINRGWKKFVDITERNNQTLALEFFANWPEREDEKVKVRGVKVPVSTAAIHAIYD 133

[Close]
BLAST of Spg002207 vs. ExPASy TrEMBL
Match: A0A2P5B0K0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_283280 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-07
Identity = 39/102 (38.24%), Postives = 52/102 (50.98%), Query Frame = 0 

Query: 195 VRFVNNLARAKYAE-LLKRDFLFEKGFSGDLLH------FLRVGITNQGWESFCSKPESV 254
           V+  +  A  +Y E +  R    EKGF GD         F+   IT   W+ FC+ PE +
Sbjct: 14  VKLKSEAAETRYEENIQNRPLSAEKGFVGDNSKPLEKPPFIEDVITQHNWQLFCAHPEDL 73

Query: 255 NAQVVHEFYANIEEEEGFQVIVRGVEVDWSPNAINALYNLQD 290
            A +V EFYAN+   +   V VRGV+V  S  AIN +Y L D
Sbjct: 74  IAPLVREFYANMTNPDDDTVYVRGVQVPLSAEAINTIYGLGD 115

The following BLAST results are available for this feature:
BLAST of Spg002207 vs. NCBI nr
Match NameE-valueIdentityDescription
PKC51568.14.5e-0933.93hypothetical protein RhiirA1_483454, partial [Rhizophagus irregularis][more]
KZM94204.17.6e-0933.04hypothetical protein DCAR_017447 [Daucus carota subsp. sativus][more]
PON46472.18.4e-0839.22hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
PON42276.14.2e-0738.24hypothetical protein PanWU01x14_283280 [Parasponia andersonii][more]
PON35554.14.2e-0738.24hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii][more]
BLAST of Spg002207 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg002207 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2N0QKH92.2e-0933.93Uncharacterized protein (Fragment) OS=Rhizophagus irregularis OX=588596 GN=Rhiir... [more]
A0A164YA283.7e-0933.04Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_017447 ... [more]
A0A2P5BCG44.1e-0839.22Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A803NJE11.5e-0733.87Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2P5B0K02.0e-0738.24Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_283280 PE... [more]
BLAST of Spg002207 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg002207.1Spg002207.1mRNA