Spg002138 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg002138
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold2: 27546372 .. 27549978 (-)
RNA-Seq ExpressionSpg002138
SyntenySpg002138
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGCTAGTCCAGCAGTTTTCTGTCTCCCAGAACTTAGGTGAGCTTCATCATAAAATGTTGTCATTCTGAGGGGCAAGAGATGGAATAACTAAGGATTTTTTAGCTTTATAAAGAGTATTGAGCCTAGTTGGTGATGAGTTTGAGGCAAGGGTATACTGCACCATAAAGTGGGTCATCCCGTGCTTAAGAGCTTATGACTGTAAGGCTGCTTTAAGTCTGAAGAACAAAAATTCAAACCCCTTGAAAATGTGTTTTGATATGTCTGATAATAGAGCTAAGCTGTGGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCCATACCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGATTGCTCAGGTAAAGGTTGAAGGTAGTATTGGATTGTCTGGTTTGATTAAGTTGTGCTTTGTCTAATGTTTTGAATTCTTGAAGGGAAGGTTGGTTAGTATTGCTCGGGACGCGCAATAGTTCAAGTTTGGGGGTGTGATAACTGCCCAAAAGGTAGTTATTTAGGCCTCATTTCTATATTGATTTGTGTGTCTTTTGTGCTTAATAGGGTTGGTTCTAGATGTAAATTATATGTTTTAACCCATTTGGAAGAATGGAAGCTTTGGAAATCATTTTGTGCAGAATCTGTTGCTGGGCGACGTGAGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGAGCAGAACTGCCACGTCACAGCTCGTTAGCCAACTTCATGAACCAACTTCTGTTGAATTATTTTCGGGATAAAGGAGCAAGGAGAGCCCTACACGTGTCCATGTTGACCTAATTCAAGCCTCCTACCCTTCTATAAAAGGAAGTAGCTGCCCAAGTCAAATTCATTCCAACTTCCCTTGGAAGCCGAGTAGTATAGAGAGATTGGAGATTACCAAGAACACCATCATCTGCAAGCTGATTAAGGAGATTATTATTTTCTTTATTATCTTGTGATTATGGACATGCCTACTCAGATTGTAATTCGTGTTTCCATGCTTATTATGAACTAAGTAGCTTTAGGCGTTGGTTAAGTAATATGTAGTTGCCGTGCTTCATCTCTAATAATATATTGATTATTGCAACTTGGTTAATTGTTGTGCTTATTCTTATTTTATGCCCGCCTGGCCAGTCGGTGTGAATACCTCTCTCTAGTTTCAGGGATGATTTAGAGAGTGTGTGGCGATTAATCACACTACGATCATTGTGTATTGGTGAACGTCAGTGACTGAGCTAGGGATAGCCAGTTGCCTAGTGCTTGATCGGTCGTACTTCATTGGGGTTGAAACACATTCCAAAAGATCCGGAGTTCCGGGAGGAATCCGCTAATAATATTGCGAGAGTTTGCATGATCAATAATATTGCTAGAGCATCTTTTAAAACAATTACTAAACCTGACCAGCGCCTGTTTCTAATCTGTCTGCCTATTTGTTTATTCTTTGTTCTGTCATTTATTTTGCTTCAGCATTATTCTTATAAAAACCAAACATTTTTACCATCTTTGAAACCATTAGAGAGTACACAAGATAGATAAAGTGGAAGCTAATTCAGGCCTTGGATTGATAATACTTATTACTTGCTGCGGACTGTGTATACTTGCACAGGAATTCTAGAGTCTTTTCAGATCATAATTTTACTCACTCTAGGAACCCAACAAGTTGTCCTAAGTAGATTGGAGAAGAAAAGAATCCAAGGAGGTCCACCTATTGAGCTGCAAAAAGGTTGGTTCTTCTTATCTCTCTGTTCTGGATTCTTTAGAACATGCATGCTTTAGGAGTAAAATTGATGTAGTTAGGTGCTTCCGATCTTCAATTGCTTCCGCATGTGTTATATGAACACCTTCAAGTACAACCATGAAACTGGTAAGTAGCTCACACATGTTAGGTCACAAGCAACAACCAATATCAAACAACATGCTTCTCACACGCAAACAACAGCTTAAAAAACAATAAAAACCCAACATGCTCACAAAGCAATAAATATCCACCATGCACATGCTTCCCACACTATGCACCCACACCCTACTAGACATCACATGATTTACACGTCATGCTCTGCACCGAACCATGAATTACGCCTCATGTTGCGCAAACCAACACGTGAATTACACGTCATGCTGCACTCCTAGCCCACATGATTTCTGCGTCATGCTACGCTAAACAAACGCATGCATTATGCGTCATGCTACGCAAAATCGAACACATGCATTATGCATCATGCTACGCAAAACCAAACATGTGAATTACGCGCCACGTTGCACACCGACATGAATTATGCGTCATGTAGCGCATCCGCTAGATTCATGCTACACATCCCGTGACAACATGCTAGGCTAACTAAACATGCTTAACACGACATCCCATCATGCTAAAATGCAACACCTCCTTATGCTTAAACACAACAGAACATGCTTATTCCAAGCAATACAACAGAACATGCTCATCTCAAGCAAAACCGCGATAATCAACATAGCAAATCATGTTTCACACAAGTATATAAGTAAGGCAAGTAACCACACAAACATACTACAGGCAATCAAACAAAACCCAGCAAGTGGAAACTGCTTACAATACATAGAAATGCTCTAGAGAACTTTGAAGGCTCCTATAGCACCCTTAATCAATTGTAAATGATCCAAATAAACTCCTAAGCAATTAGGAAAACATTTAGAGGTTAACACTAGCCCAATAACTTGAAGCTACTAAACAAGTGTCTAAGGGAGAAAACTTACTCAAGATCAACCTTAGGTCCTTGGTAAATGGCTTAATATGCTCGAGAATGCTCTAAAATGATTCCAGCTACTAAAAAACTTATCTACTATAAGGAATCGATTTTCAGCATTAAGAAGGGTATTTAAAAGGCTTAAAGGCCTTGGTAACCTTACCGAATTGCATAAACGAGCCAACCTGCTTGCTGGAATTTATCGACCAGCACCAAAATCCTTGATTAAGCGCTGCCCGAGATCCAAATTGACTCGAAACTAAAACTAAAGGACACCCGATGGTTAAAAGCTACTTTAAAGCTAACTACAACTATTACCAAAGGTTTTAGGGCGCACAAACTTACCGATCAGCACCAAACAGCCTCAATTAAGCGTTGTACAGTGACTGCAAATGGCCCAAAACCTGCAATTTAGAAGTCGTTGTGGCTTAGGTAACCGAGATATGAAGCGAACACTCAATGGGTCGAGCTACAGTTACTGGAGTTTCCAAAAGACACCGAAGGAATGTTGTAATCTCACCAAACTAGAGAGATTTGAGGTCGAATGCTTCCTAGACGTCGCTGCAGATCAGAACCTTAGACCCAAATACTCGAATCTTAACCAAGCGAAATCAAAGAAGGGAAACTTACGCTAATTCCTCAAGGAGATTGCGGCATCAGGATGGAGGAGAGAAATGGTGGCGGCGCGAACACAAGGGGAGAGAAAAATCGCCGTGGACAGACCCACTGAGAGGGAGAAAAACGCACGGACGAAGCGGGAGAGAGAGCAGCGTGCGACGATGGCGGCTCGAGCAGGTGGGGACGGCACTGGGCTGGCGGCGATGGGAGTTGGGCAGCAGCCCAACTGCTTCACGGCTTAG

mRNA sequence

ATGAATGCTAGTCCAGCAGTTTTCTGTCTCCCAGAACTTAGAGTATTGAGCCTAGTTGGTGATGAGTTTGAGGCAAGGGTATACTGCACCATAAAGTGGGTCATCCCGTGCTTAAGAGCTTATGACTGTAAGGCTGCTTTAAGTCTGAAGAACAAAAATTCAAACCCCTTGAAAATGTGTTTTGATATGTCTGATAATAGAGCTAAGCTGTGGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCCATACCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGATTGCTCAGAATCTGTTGCTGGGCGACGTGAGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGAGCAGAACTGCCACGTCACAGCTCGAATTCTAGAGTCTTTTCAGATCATAATTTTACTCACTCTAGGAACCCAACAAGTTGTCCTAAGTAGATTGGAGAAGAAAAGAATCCAAGGAGGTCCACCTATTGAGCTGCAAAAAGGATGGAGGAGAGAAATGGTGGCGGCGCGAACACAAGGGGAGAGAAAAATCGCCGTGGACAGACCCACTGAGAGGGAGAAAAACGCACGGACGAAGCGGGAGAGAGAGCAGCGTGCGACGATGGCGGCTCGAGCAGGTGGGGACGGCACTGGGCTGGCGGCGATGGGAGTTGGGCAGCAGCCCAACTGCTTCACGGCTTAG

Coding sequence (CDS)

ATGAATGCTAGTCCAGCAGTTTTCTGTCTCCCAGAACTTAGAGTATTGAGCCTAGTTGGTGATGAGTTTGAGGCAAGGGTATACTGCACCATAAAGTGGGTCATCCCGTGCTTAAGAGCTTATGACTGTAAGGCTGCTTTAAGTCTGAAGAACAAAAATTCAAACCCCTTGAAAATGTGTTTTGATATGTCTGATAATAGAGCTAAGCTGTGGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCCATACCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGATTGCTCAGAATCTGTTGCTGGGCGACGTGAGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGAGCAGAACTGCCACGTCACAGCTCGAATTCTAGAGTCTTTTCAGATCATAATTTTACTCACTCTAGGAACCCAACAAGTTGTCCTAAGTAGATTGGAGAAGAAAAGAATCCAAGGAGGTCCACCTATTGAGCTGCAAAAAGGATGGAGGAGAGAAATGGTGGCGGCGCGAACACAAGGGGAGAGAAAAATCGCCGTGGACAGACCCACTGAGAGGGAGAAAAACGCACGGACGAAGCGGGAGAGAGAGCAGCGTGCGACGATGGCGGCTCGAGCAGGTGGGGACGGCACTGGGCTGGCGGCGATGGGAGTTGGGCAGCAGCCCAACTGCTTCACGGCTTAG

Protein sequence

MNASPAVFCLPELRVLSLVGDEFEARVYCTIKWVIPCLRAYDCKAALSLKNKNSNPLKMCFDMSDNRAKLWQVLRIELKVVIICPYRKNYFAAAELGFADCSESVAGRREGANSVLQQNWEQNCHVTARILESFQIIILLTLGTQQVVLSRLEKKRIQGGPPIELQKGWRREMVAARTQGERKIAVDRPTEREKNARTKREREQRATMAARAGGDGTGLAAMGVGQQPNCFTA
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..208

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg002138.1Spg002138.1mRNA