Spg002137 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg002137
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold2: 26267664 .. 26268888 (+)
RNA-Seq Expression	Spg002137
Synteny	Spg002137

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGCAACAATAATCCAACACCTCATTTGGAGCAAGAATGTTTGTTTACTTTTGAAGACCAATATCAAGATGTATGCCCAACAAGAAATGCAACAAGAGATGGAACCACAAGTGTCAACTAGCTTGGAAGAACTCATAAGAGAATATATTGTGAGAAATGATAAATCCTTGCAAAACTTGGAGATTCAAGTAGGGCAACTGATAGAGGAATTGAAAAACATTCAACAAGAAATCTTACTTAAGAACAAAGAGAATGTGAAACAAGAAGCACAAGAGCAATACAATGGGATGACATTTCAAAGTGGATTGAAGCATGAAGACCTTGAACTCTCCGTAGAAGGAAGAAGCATTCCAACAGTTGAAAATACTGAAGAGACAAAAGAGAGAGAAGAGATTAAAGAAGAATCGCCTCAAAAAGAGAATAAGGAGAAGACACCAAAGAAAGAAGTTGCAGTGAGCCATGCAGATGTCACTTCACAACAAGTGAACTTTGATGTGCTCCAGGCATTAGAACACCCTAATGAAATGAAGGGATGTTTTGCTTTTGATTCTACTGATTCTTTTACATATTTTAGCCTGTATACAATGTTAGAAAAAGATGGATTTGAGAACGATCCTAATGATTCCTTTGCTGGTTGTAGCTTACAGAAAATGTTATTTGAGGAAGAAATCAAAGAGGAAATCATGGAAGATGAAAATATGCAATATACAACAGAGGATGAAACCACAAAATCTACATTCAAGAGTAGATTGAGTGAACCGATAATGGAGACTAAGCACTCCATGATTAAAACGCCTCAATTAAGACTCAAATCTCGTCCGTTATCAAGACCTAGGGTCAAGATGAAAGTTTGCAACACAAGAAGTAGGAATAAAGCTTTAATCTCCCTGTTGGAGATCCGCTAAGTCATTCTTTCTCTTTGCATGAATATGTATTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACATAGTTGAGCTTGTGTATGTTTCAGGAAGCCAATAAAGTTAGGAGACAATACGAAGAGAACATGAGACAGGAAGATCCAGAAAAGGAGTAGAACAAGGACCATTAGACCTATGCTCCAGTGAGAGATGAGGCTATCAAGCGAATGTTCCTGGCCAGCTCATCTGATGAAGCTTCACTTGCCCCTCCATTTCCATCATCCCTTCTGGATGAGCCTGAGACCTCTAATACGAAGGACATATCTTCCAAGAACTAG

mRNA sequence

ATGTTAGCAACAATAATCCAACACCTCATTTGGAGCAAGAATGTTTGTTTACTTTTGAAGACCAATATCAAGATGTATGCCCAACAAGAAATGCAACAAGAGATGGAACCACAAGTGTCAACTAGCTTGGAAGAACTCATAAGAGAATATATTGTGAGAAATGATAAATCCTTGCAAAACTTGGAGATTCAAGTAGGGCAACTGATAGAGGAATTGAAAAACATTCAACAAGAAATCTTACTTAAGAACAAAGAGAATGTGAAACAAGAAGCACAAGAGCAATACAATGGGATGACATTTCAAAGTGGATTGAAGCATGAAGACCTTGAACTCTCCGTAGAAGGAAGAAGCATTCCAACAGTTGAAAATACTGAAGAGACAAAAGAGAGAGAAGAGATTAAAGAAGAATCGCCTCAAAAAGAGAATAAGGAGAAGACACCAAAGAAAGAAGTTGCAGTGAGCCATGCAGATGTCACTTCACAACAAGTGAACTTTGATGTGCTCCAGGCATTAGAACACCCTAATGAAATGAAGGGATGTTTTGCTTTTGATTCTACTGATTCTTTTACATATTTTAGCCTGTATACAATGTTAGAAAAAGATGGATTTGAGAACGATCCTAATGATTCCTTTGCTGGTTGTAGCTTACAGAAAATGTTATTTGAGGAAGAAATCAAAGAGGAAATCATGGAAGATGAAAATATGCAATATACAACAGAGGATGAAACCACAAAATCTACATTCAAGAGTAGATTGAGTGAACCGATAATGGAGACTAAGCACTCCATGATTAAAACGCCTCAATTAAGACTCAAATCTCGTCCGTTATCAAGACCTAGGGTCAAGATGAAAGTTTGCAACACAAGAATGAGAGATGAGGCTATCAAGCGAATGTTCCTGGCCAGCTCATCTGATGAAGCTTCACTTGCCCCTCCATTTCCATCATCCCTTCTGGATGAGCCTGAGACCTCTAATACGAAGGACATATCTTCCAAGAACTAG

Coding sequence (CDS)

ATGTTAGCAACAATAATCCAACACCTCATTTGGAGCAAGAATGTTTGTTTACTTTTGAAGACCAATATCAAGATGTATGCCCAACAAGAAATGCAACAAGAGATGGAACCACAAGTGTCAACTAGCTTGGAAGAACTCATAAGAGAATATATTGTGAGAAATGATAAATCCTTGCAAAACTTGGAGATTCAAGTAGGGCAACTGATAGAGGAATTGAAAAACATTCAACAAGAAATCTTACTTAAGAACAAAGAGAATGTGAAACAAGAAGCACAAGAGCAATACAATGGGATGACATTTCAAAGTGGATTGAAGCATGAAGACCTTGAACTCTCCGTAGAAGGAAGAAGCATTCCAACAGTTGAAAATACTGAAGAGACAAAAGAGAGAGAAGAGATTAAAGAAGAATCGCCTCAAAAAGAGAATAAGGAGAAGACACCAAAGAAAGAAGTTGCAGTGAGCCATGCAGATGTCACTTCACAACAAGTGAACTTTGATGTGCTCCAGGCATTAGAACACCCTAATGAAATGAAGGGATGTTTTGCTTTTGATTCTACTGATTCTTTTACATATTTTAGCCTGTATACAATGTTAGAAAAAGATGGATTTGAGAACGATCCTAATGATTCCTTTGCTGGTTGTAGCTTACAGAAAATGTTATTTGAGGAAGAAATCAAAGAGGAAATCATGGAAGATGAAAATATGCAATATACAACAGAGGATGAAACCACAAAATCTACATTCAAGAGTAGATTGAGTGAACCGATAATGGAGACTAAGCACTCCATGATTAAAACGCCTCAATTAAGACTCAAATCTCGTCCGTTATCAAGACCTAGGGTCAAGATGAAAGTTTGCAACACAAGAATGAGAGATGAGGCTATCAAGCGAATGTTCCTGGCCAGCTCATCTGATGAAGCTTCACTTGCCCCTCCATTTCCATCATCCCTTCTGGATGAGCCTGAGACCTCTAATACGAAGGACATATCTTCCAAGAACTAG

Protein sequence

MLATIIQHLIWSKNVCLLLKTNIKMYAQQEMQQEMEPQVSTSLEELIREYIVRNDKSLQNLEIQVGQLIEELKNIQQEILLKNKENVKQEAQEQYNGMTFQSGLKHEDLELSVEGRSIPTVENTEETKEREEIKEESPQKENKEKTPKKEVAVSHADVTSQQVNFDVLQALEHPNEMKGCFAFDSTDSFTYFSLYTMLEKDGFENDPNDSFAGCSLQKMLFEEEIKEEIMEDENMQYTTEDETTKSTFKSRLSEPIMETKHSMIKTPQLRLKSRPLSRPRVKMKVCNTRMRDEAIKRMFLASSSDEASLAPPFPSSLLDEPETSNTKDISSKN

Homology

The following BLAST results are available for this feature:

BLAST of Spg002137 vs.


Match Name	E-value	Identity	Description

BLAST of Spg002137 vs.


Match Name	E-value	Identity	Description

BLAST of Spg002137 vs.


Match Name	E-value	Identity	Description

BLAST of Spg002137 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 58..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 303..333
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 318..333

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg002137.1	Spg002137.1	mRNA